HHSEARCH alignment of GI: 254780248 and SCOP domain: d2uubn1

Alignment

Probab=99.85  E-value=4.1e-23  Score=158.71  Aligned_cols=56  Identities=43%  Similarity=0.778  Sum_probs=52.8

Q ss_pred             HHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             9999720860443244402214356641144042562999999996589998321469
Q gi|254780248|r   44 AMLQLGSLPRDGSRVRVRNRCEISGRSRGVYRDFRLSRLALRELGGVGKIPGIIKSSW  101 (101)
Q Consensus        44 a~~kL~~Lprnss~tRi~NRC~~TGR~Rgv~r~f~lSRi~fRela~~G~ipGv~KaSW  101 (101)
                      ...+++++|++  +||++|||++||||||||++||||||+|||+|+.|+||||+||||
T Consensus         5 ~~~k~~~~pk~--~tR~~NRC~~tGR~Rg~~r~F~lsR~~fR~la~~G~ipGv~KaSW   60 (60)
T d2uubn1           5 LIEKAKRTPKF--KVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW   60 (60)
T ss_dssp             GGGGGCSCCSS--GGGCCCCCTTTCCCSSBCTTTSCBHHHHHHHHHHTCSTTCEECCC
T ss_pred             HHHHHHCCCCC--CCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEECCC
T ss_conf             99987628988--763502136789976430344607999999998598888660579

SCOP domain information

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Ribosomal protein S14
domain: Ribosomal protein S14
species: Thermus thermophilus [TaxId: 274]