HHsearch alignment for GI: 254780249 and conserved domain: COG0094
>COG0094 RplE Ribosomal protein L5 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=466.03 Aligned_cols=179 Identities=62% Similarity=1.042 Sum_probs=177.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 61189999999999999982699822286044999974578756537899999998776538961354123764211155
Q gi|254780249|r 7 EPRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIAGFKLR 86 (185)
Q Consensus 7 ~pRLk~~Y~~~i~~dL~~k~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~~fkiR 86 (185)
T Consensus 1 ~~rlk~~y~~~i~~~l~~~~~y~n~M~~P~i~KvvvNmGvGea~~d~k~l~~A~~~L~~ItGQKPv~tkAkksia~FkiR 80 (180)
T COG0094 1 MNRLKEKYKDEIVPALIKKFGYSNPMQVPRIEKVVVNMGVGEAAADGKRLEKAAKDLELITGQKPVITKAKKSIAGFKIR 80 (180)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHCHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCC
T ss_conf 90066677778758988764337864255367999975532322144899999999999868986562011355456622
Q ss_pred CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 89862889996034289999999998767752046887110157773143301110068754014688554359998044
Q gi|254780249|r 87 TGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTT 166 (185)
Q Consensus 87 kG~piG~kvTLRg~~my~FL~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~Iti~Tta 166 (185)
T Consensus 81 ~g~pIG~KVTLRg~rm~eFL~rl~~i~lPrvrdfrGls~~sFDg~GN~sfGI~E~i~FPei~yD~~~~i~GMdi~ivtta 160 (180)
T COG0094 81 EGMPIGVKVTLRGERMYEFLDRLLNIALPRVRDFRGLSPKSFDGRGNYSFGIKEQIIFPEIDYDPIIGIRGMDITIVTTA 160 (180)
T ss_pred CCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 79732689997648899999999976354422346778566379785576650124067645676677267428999527
Q ss_pred CCHHHHHHHHHHHCCCCCC
Q ss_conf 8968999999980898689
Q gi|254780249|r 167 RSDREAKYLLTLFGFPFPK 185 (185)
Q Consensus 167 ~~~~ea~~Lls~~g~Pf~k 185 (185)
T Consensus 161 ~~d~e~R~ll~~~~~Pf~~ 179 (180)
T COG0094 161 KGDVEARALLSAFGIPFRK 179 (180)
T ss_pred CCHHHHHHHHHHCCCCCCC
T ss_conf 9719999999855999778