HHsearch alignment for GI: 254780249 and conserved domain: PRK04219
>PRK04219 rpl5p 50S ribosomal protein L5P; Reviewed.
Probab=100.00 E-value=0 Score=332.77 Aligned_cols=150 Identities=43% Similarity=0.629 Sum_probs=141.4
Q ss_pred HCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHH
Q ss_conf 26998222860449999745787565378999999987765389613541237642111558986288999603428999
Q gi|254780249|r 26 FSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIAGFKLRTGMPIGTKVTLRGTNMYDF 105 (185)
Q Consensus 26 ~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~~fkiRkG~piG~kvTLRg~~my~F 105 (185)
T Consensus 6 ~~~~N~M~~pki~KvviN~GvGe~~~---~l~~a~~~L~~ITGQkPv~t~AKksi~~FkiRkG~pIG~kVTLRg~~m~eF 82 (177)
T PRK04219 6 LWEMNPMRKPRIEKVTVNIGVGESGE---RLTKAEKLLEELTGQKPVRTKAKRTIPDFGIRKGEPIGVKVTLRGEKAEEF 82 (177)
T ss_pred HHHCCCCCCCEEEEEEEECCCCHHHH---HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECHHHHHHH
T ss_conf 75349854763789999747883277---899999999996199618871453233456678984789999857889999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 9999998767752046887110157773143301110068754014688554359998044896899999998089868
Q gi|254780249|r 106 LDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTTRSDREAKYLLTLFGFPFP 184 (185)
Q Consensus 106 L~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~Iti~Tta~~~~ea~~Lls~~g~Pf~ 184 (185)
T Consensus 83 L~rll~~~~~ri~------~~~FD~~GN~sfGI~E~i~fPei~yD~~~gI~Gmdi~Vvl~rpG~Ri~~Rk~~~~~i~~~ 155 (177)
T PRK04219 83 LKRALEAVGNRLK------ASSFDETGNVSFGIEEHIDFPGVKYDPEIGIFGMDVAVTLERPGYRVARRRRKRRKIPKR 155 (177)
T ss_pred HHHHHHHHCCCCC------CCCCCCCCCEEECCCEEEECCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCC
T ss_conf 9988887566427------233189975674660158647652066566322369999826962799998874389954