HHsearch alignment of GI: 254780249 and MMDB domain: 3bbo_H_

>3bbo_H (H:) Ribosomal protein L5; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00  E-value=0  Score=458.67  Aligned_cols=184  Identities=50%  Similarity=0.874  Sum_probs=181.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf             98875611899999999999999826998222860449999745787565378999999987765389613541237642
Q gi|254780249|r    2 VDCKYEPRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIA   81 (185)
Q Consensus         2 ~~~~~~pRLk~~Y~~~i~~dL~~k~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~   81 (185)
                      ++++|+|||+.||+++|++||+++++|+|+|++|+|+||+||+|+|++++|++.++.+..+|+.||||+|++++||+||+
T Consensus        11 ~~~~~m~~l~~~Y~~~v~~dL~~k~~~~N~m~vPki~KIvin~gvg~~~~d~k~l~~a~~~L~~ITGQkP~~t~AKksia   90 (220)
T 3bbo_H           11 AEAETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNAKGLDAAINELALITGQRPVKTKAKTSIA   90 (220)
T ss_dssp             -------CHHHHHTTTHHHHHHHSSCCCCSSSSCCEEEEECCCCCCCSSCCHHHHHHHHHHHHHHTCSCCCCCBCCSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCEEECCCCCCCCC
T ss_conf             55456689999999999999999848998511671569998678881220657899999998877525100034545531


Q ss_pred             CCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEE
Q ss_conf             11155898628899960342899999999987677520468871101577731433011100687540146885543599
Q gi|254780249|r   82 GFKLRTGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDIS  161 (185)
Q Consensus        82 ~fkiRkG~piG~kvTLRg~~my~FL~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~It  161 (185)
                      +||+|||+|+||||||||++||+||+||+++||||||||+|++.++||++|||+||++|+++|||++||.+++++||||+
T Consensus        91 ~FkiRkg~piG~kvTLRg~~my~FL~kli~~vlPrirdf~gi~~~sfd~~gN~sfGi~e~~~FPEi~~d~~~~i~G~~It  170 (220)
T 3bbo_H           91 GFKVREGMTLGIAVTLRGNLMYSFLDRLINLALPRTRDFQGVNPNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVC  170 (220)
T ss_dssp             SSCCCTTCBCCCCCEECTHHHHHHHHHHHHSSTTTSSSCCCCCCSCCCSSSEEEEEECSCCCCSSCCTTSCSSCCCEEEE
T ss_pred             CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf             11324898226899975544999999999999987541135686312467714544035430888774224673660289


Q ss_pred             EECCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             980448968999999980898689
Q gi|254780249|r  162 ICTTTRSDREAKYLLTLFGFPFPK  185 (185)
Q Consensus       162 i~Tta~~~~ea~~Lls~~g~Pf~k  185 (185)
                      |||+|++++|+++|||+|||||.+
T Consensus       171 ivtta~t~~~a~~Lls~~g~Pf~~  194 (220)
T 3bbo_H          171 ITTTAKTDKEAYKLLSLMGMPFRE  194 (220)
T ss_dssp             EEESCSSGGGTHHHHHTTTCCC--
T ss_pred             EEECCCCHHHHHHHHHHCCCCCCC
T ss_conf             995259979999999986998626