HHSEARCH alignment of GI: 254780249 and SCOP domain: d1iq4a_

Alignment

Probab=100.00  E-value=0  Score=469.08  Aligned_cols=179  Identities=56%  Similarity=1.023  Sum_probs=177.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf             61189999999999999982699822286044999974578756537899999998776538961354123764211155
Q gi|254780249|r    7 EPRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALITGQKPVITRARRSIAGFKLR   86 (185)
Q Consensus         7 ~pRLk~~Y~~~i~~dL~~k~~~~N~~~vPki~KIvin~gvg~a~~dkk~l~~~~~~L~~ITGqkP~~~~aKksi~~fkiR   86 (185)
                      ..|||+||+++|++||+++++|+|+|++|+|+||+||+|+|+|++|++.++.+..+|+.||||+|++++||+||++||+|
T Consensus         1 M~rLk~~Y~~~v~~~L~~k~~~~N~m~vPki~KIvln~gvg~a~~~~~~l~~~~~~L~~ItGQkp~~t~akksi~~fklR   80 (179)
T d1iq4a_           1 MNRLKEKYLNEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLR   80 (179)
T ss_dssp             CCHHHHHHHHTHHHHHHHHHCCSSGGGSCCEEEEEEEEECSCSSSCHHHHHHHHHHHHHHHSSCCEEEECCSCSCSSSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf             91789999999999999985899811157046999978888421346899999999987428834775346542330014


Q ss_pred             CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             89862889996034289999999998767752046887110157773143301110068754014688554359998044
Q gi|254780249|r   87 TGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTT  166 (185)
Q Consensus        87 kG~piG~kvTLRg~~my~FL~kli~~vlPrikdf~g~~~~~~d~~Gn~sfGi~e~~~FPEi~yd~~~~~~G~~Iti~Tta  166 (185)
                      +|+|+||+|||||++||+||+||+++||||+|||+|++.++||+.|||+||++|+++|||++||++++++||||||||||
T Consensus        81 kg~piG~kVTLRg~~m~~FL~rli~ivlPrirdf~g~~~~~fd~~gn~sfGi~e~~~fPei~yd~~~~i~G~~ItivTta  160 (179)
T d1iq4a_          81 QGMPIGAKVTLRGERMYEFLDKLISVSLPRARDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVNKVRGMDIVIVTTA  160 (179)
T ss_dssp             TTCEEEEEEEECHHHHHHHHHHHHHTTGGGSTTCCCBCSSCBCSSSEEEEEESCGGGSTTCCGGGSSCCCCEEEEEEESC
T ss_pred             CCCEEEEEEEECCCHHHHHHHHHHHHCCCHHCCCCCCCCHHCCCCCCEEECHHHHHCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf             89616887532131388999999984051000122245121065663365515764043235465578676349999566


Q ss_pred             CCHHHHHHHHHHHCCCCCC
Q ss_conf             8968999999980898689
Q gi|254780249|r  167 RSDREAKYLLTLFGFPFPK  185 (185)
Q Consensus       167 ~~~~ea~~Lls~~g~Pf~k  185 (185)
                      ++++||++|||+|||||+|
T Consensus       161 ~~~~e~~~Ll~~~g~Pf~~  179 (179)
T d1iq4a_         161 NTDEEARELLALLGMPFQK  179 (179)
T ss_dssp             SSHHHHHHHHHHHTCCBCC
T ss_pred             CCHHHHHHHHHHCCCCCCC
T ss_conf             9979999999985998569

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: RL5-like
superfamily: RL5-like
family: Ribosomal protein L5
domain: Ribosomal protein L5
species: Bacillus stearothermophilus [TaxId: 1422]