RPSBLAST alignment of GI: 254780249 and protein with PDBid: 1mji
>1mji_A 50S ribosomal protein L5; ribosomal protein - 5S rRNA complex, ribosome; 2.50A {Thermus thermophilus} SCOP: d.77.1.1 PDB: 2hgj_G 2hgq_G 2hgu_G 2j01_G 2j03_G 2jl6_G 2jl8_G 2v47_G 2v49_G 2wdi_G 2wdj_G 2wdl_G 2wdn_G 2wh2_G 2wh4_G 2wrj_G 2wrl_G 2wro_G 2wrr_G 3hux_G ... Length = 182
Score = 247 bits (632), Expect = 1e-66
Identities = 96/181 (53%), Positives = 134/181 (74%)
Query: 5 KYEPRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLA 64
+ LK++Y +R + + F Y+NV ++P++EKVV+N G+GE+ D++ E AA +LA
Sbjct: 2 PLDVALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELA 61
Query: 65 LITGQKPVITRARRSIAGFKLRTGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLN 124
LITGQKP +TRA++SI+ FKLR GMPIG +VTLR M+ FL++L+N+ +PRIRDF GLN
Sbjct: 62 LITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLN 121
Query: 125 SRSFDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTTRSDREAKYLLTLFGFPFP 184
SFDG GN++ G+RE ++FPEI YD VD + GMDI++ TT +D EA+ LL L GFPF
Sbjct: 122 PNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFR 181
Query: 185 K 185
K
Sbjct: 182 K 182