RPSBLAST alignment of GI: 254780249 and protein with PDBid: 3i1n
>3i1n_F 50S ribosomal protein L5; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_F 1vs6_F 3i1p_F 3i1r_F 3i1t_F 3i20_F 3i22_F 2qam_F* 1p85_D 1p86_D 2awb_F 2aw4_F 2i2v_F 2j28_F 2i2t_F* 2qao_F* 2qba_F* 2qbc_F* 2qbe_F 2qbg_F ... Length = 179
Score = 206 bits (525), Expect = 3e-54
Identities = 102/178 (57%), Positives = 138/178 (77%)
Query: 8 PRLKKEYCLRIREAMQQEFSYKNVMQIPKIEKVVVNMGVGESIADSKKAESAAADLALIT 67
+L Y + + + EF+Y +VMQ+P++EK+ +NMGVGE+IAD K ++AAADLA I+
Sbjct: 2 AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAIS 61
Query: 68 GQKPVITRARRSIAGFKLRTGMPIGTKVTLRGTNMYDFLDRLINMGMPRIRDFHGLNSRS 127
GQKP+IT+AR+S+AGFK+R G PIG KVTLRG M++F +RLI + +PRIRDF GL+++S
Sbjct: 62 GQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKS 121
Query: 128 FDGSGNFSFGIREHIVFPEINYDKVDCVLGMDISICTTTRSDREAKYLLTLFGFPFPK 185
FDG GN+S G+RE I+FPEI+YDKVD V G+DI+I TT +SD E + LL F FPF K
Sbjct: 122 FDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK 179