HHsearch alignment for GI: 254780250 and conserved domain: COG0250
>COG0250 NusG Transcription antiterminator [Transcription].
Probab=95.76 E-value=0.019 Score=33.65 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEC
Q ss_conf 226586999984378886469999974699899906
Q gi|254780250|r 3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQG 38 (102)
Q Consensus 3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeG 38 (102)
T Consensus 123 ~~e~Gd~VrI~~GpFa~f~g~V~evd~ek~~~~v~v 158 (178)
T COG0250 123 DFEPGDVVRIIDGPFAGFKAKVEEVDEEKGKLKVEV 158 (178)
T ss_pred CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 678998899916678995178999847676899999