HHsearch alignment for GI: 254780250 and conserved domain: pfam00467
>pfam00467 KOW KOW motif. This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and NusG.
Probab=97.43 E-value=0.00013 Score=45.37 Aligned_cols=32 Identities=41% Similarity=0.574 Sum_probs=29.9
Q ss_pred CCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf 58699998437888646999997469989990
Q gi|254780250|r 6 TGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ 37 (102)
Q Consensus 6 kGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe 37 (102)
T Consensus 1 ~G~~V~V~~G~~~G~~g~I~~i~~~~~~v~v~ 32 (32)
T pfam00467 1 KGDVVRVISGPFKGKKGKVVEVDDSKARVHVE 32 (32)
T ss_pred CCCEEEEECCCCCCCCCCEEEECCCCEEEECC
T ss_conf 98789993467568755489960752068509