HHsearch alignment of GI: 254780250 and MMDB domain: 3i1n_U_1-25_67-104
>3i1n_U (U:1-25,U:67-104) 50S ribosomal protein L24; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_U 1vs6_U 3i1p_U 3i1r_U 3i1t_U 3i20_U 3i22_U 3e1b_O 3e1d_O 2qam_U* 1p85_S 1p86_S 2awb_U 2aw4_U 2i2v_U 2i2t_U* 2qao_U* 2qba_U* 2qbc_U* 2qbe_U ...
Probab=99.83 E-value=6.9e-22 Score=138.85 Aligned_cols=61 Identities=52% Similarity=0.847 Sum_probs=57.9
Q ss_pred CCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECC-CCCEEE
Q ss_conf 9722658699998437888646999997469989990605974320577765651799970468665788978-996228
Q gi|254780250|r 1 MEKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDK-DGKQVR 79 (102)
Q Consensus 1 M~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~-~~k~tr 79 (102)
||+|++||+|+||||+|+|++|+| +|||||+|| +++|||
T Consensus 2 ~~~ikkgD~V~vi~Gkdkgk~g~v----------------------------------------vSNVmlvdp~~gkptR 41 (63)
T 3i1n_U 2 AAKIRRDDEVIVLTGKDKGKRGKV----------------------------------------VSNVAIFNAATGKADR 41 (63)
T ss_dssp CCSSCSSCEEEECSSSSTTCEEEE----------------------------------------GGGEEEBCSSSSSBCC
T ss_pred CCCCCCCCEEEEEECCCCCCCCEE----------------------------------------HHHEEEECCCCCCCEE
T ss_conf 763068999999479889985279----------------------------------------6788888286898558
Q ss_pred EEEEEECCEEEEEECCCCCEEC
Q ss_conf 8999999979999815687715
Q gi|254780250|r 80 VGFSFVDGKKIRIAKRSGEPID 101 (102)
Q Consensus 80 v~~~~~dG~kvRv~kksg~~id 101 (102)
|+|+++||+|+|+||+||++|.
T Consensus 42 VG~k~edGkKVRv~KksGe~Ik 63 (63)
T 3i1n_U 42 VGFRFEDGKKVRFFKSNSETIK 63 (63)
T ss_dssp CCBCCSSSSCCBCCTTTCCCC-
T ss_pred EEEEEECCEEEEEEECCCCCCC
T ss_conf 9999979939999914888848