HHsearch results for GI: 254780250 and protein with PDBid: 1vq8_T
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=99.90 E-value=2.3e-24 Score=151.45 Aligned_cols=72 Identities=25% Similarity=0.329 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECCC-CCEEEE
Q ss_conf 7226586999984378886469999974699899906059743205777656517999704686657889789-962288
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDKD-GKQVRV 80 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~~-~k~trv 80 (102)
++|++||+|+||+|+|+|++|+|++|+++.++|+|||+|+.++|.+ +.|+|||+|||||+||. ++++|+
T Consensus 41 ~~IkkGD~V~Vi~Gk~KGk~GkV~~V~~k~~rV~Vegvn~~k~~~k----------~~~~pIh~SNV~i~~~~~~~~~R~ 110 (120)
T 1vq8_T 41 VRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE----------EVPRPLDTSNVRVTDLDLEDEKRE 110 (120)
T ss_dssp EECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECSSSC----------EEECCBCGGGEEEEECCCCCHHHH
T ss_pred CCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCEEEECCCC----------EEECCCCHHHEEEEECCCCCCHHH
T ss_conf 3150799999956676997532999986799999948289955897----------786434648889984767870476
Q ss_pred EEE
Q ss_conf 999
Q gi|254780250|r 81 GFS 83 (102)
Q Consensus 81 ~~~ 83 (102)
++.
T Consensus 111 ~~l 113 (120)
T 1vq8_T 111 ARL 113 (120)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 676