HHsearch results for GI: 254780250 and protein with PDBid: 2jvv_A

>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G

Probab=95.99  E-value=0.0073  Score=34.67  Aligned_cols=35  Identities=26%  Similarity=0.153  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             22658699998437888646999997469989990
Q gi|254780250|r    3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ   37 (102)
Q Consensus         3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe   37 (102)
                      .+..||.|.|++|..+|-.|.|.+++..++++.|.
T Consensus       127 ~~~~Gd~V~I~~GPf~g~~g~v~~v~~~k~r~~V~  161 (181)
T 2jvv_A          127 LFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVS  161 (181)
T ss_dssp             CCCTTEEEEECSSTTTTEEEEEEEEETTTTEEEEE
T ss_pred             CCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEE
T ss_conf             10079889991368999689999980778999999