HHsearch results for GI: 254780250 and protein with PDBid: 3ofq_U
>3ofq_U 50S ribosomal protein L24; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 2j28_U* 3fik_U 2wwq_U 3ofr_U* 3i1n_U 1vs8_U 1vs6_U 1vt2_U 3i1p_U 3i1r_U 3i1t_U 3i20_U 3i22_U 3kcr_U 3orb_U* 3e1b_O 3e1d_O 2qam_U* 1p85_S 1p86_S ...
Probab=100.00 E-value=1.6e-41 Score=244.73 Aligned_cols=98 Identities=49% Similarity=0.839 Sum_probs=92.8
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCC-C-CCCCEEEEEEECCCHHHEEEECC-CCCEE
Q ss_conf 722658699998437888646999997469989990605974320577-7-65651799970468665788978-99622
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQT-P-NKEAGIISKEASIHLSNLSLIDK-DGKQV 78 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~-~-~~~gGii~~E~pIh~SNV~lvd~-~~k~t 78 (102)
+||++||+|+||||+|||++|+|++|+++ |+|+|||+|+++||++|+ + +++|||+++|+|||+|||||+|| +++||
T Consensus 2 akIkkGD~V~VisGkdKGK~G~Vl~v~~~-~rviVeGvN~~kkH~Kp~~~~~~~Ggii~~E~pIhiSNV~lvd~~~~k~t 80 (102)
T 3ofq_U 2 AKIRRDDEVIVLTGKDKGKRGKVKNVLSS-GKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKAD 80 (102)
T ss_dssp CCSCSSCCBCCCSSSSCSCCBCCCCCCSS-SCCCCSSSSCCCBCCCCCSSSCCCCCCBCCCCCCCSTTCCBBCSSSSSBC
T ss_pred CCCCCCCEEEEEECCCCCCCEEEEEEECC-CEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEHHHEEEECCCCCCCE
T ss_conf 86317999999479889974589999589-96999752758885078877589986899986783778888828789846
Q ss_pred EEEEEEECCEEEEEECCCCCEE
Q ss_conf 8899999997999981568771
Q gi|254780250|r 79 RVGFSFVDGKKIRIAKRSGEPI 100 (102)
Q Consensus 79 rv~~~~~dG~kvRv~kksg~~i 100 (102)
|++|+++||+|+|||++||++|
T Consensus 81 rv~~k~~dgkKvRv~kksg~~I 102 (102)
T 3ofq_U 81 RVGFRFEDGKKVRFFKSNSETI 102 (102)
T ss_dssp CCCCCCSSSCCCCCCTTSCCCC
T ss_pred EEEEEEECCEEEEEEECCCCCC
T ss_conf 8999998993999994479899