Query gi|254780250|ref|YP_003064663.1| 50S ribosomal protein L24 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 102
No_of_seqs 104 out of 1662
Neff 5.0
Searched_HMMs 13730
Date Tue May 24 06:04:55 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780250.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2zjrr1 b.34.5.1 (R:4-113) Rib 100.0 4.4E-42 0 246.4 0.3 98 2-99 11-110 (110)
2 d2gycs1 b.34.5.1 (S:3-101) Rib 100.0 3.8E-40 2.8E-44 235.9 -3.7 96 3-99 1-99 (99)
3 d2j01y1 b.34.5.1 (Y:2-102) Rib 100.0 1.4E-40 9.8E-45 238.2 -6.9 95 2-96 4-101 (101)
4 d1vqot1 b.34.5.1 (T:1-119) Rib 99.9 2.9E-24 2.1E-28 149.6 6.1 71 2-82 40-111 (119)
5 d1nppa2 b.34.5.4 (A:191-248) N 96.7 0.00093 6.8E-08 38.2 4.7 34 4-37 5-38 (58)
6 d1nz9a_ b.34.5.4 (A:) N-utiliz 96.7 0.001 7.5E-08 38.0 4.8 34 4-37 5-38 (58)
7 d2do3a1 b.34.5.5 (A:462-523) T 96.1 0.0032 2.3E-07 35.4 4.2 31 3-35 10-40 (62)
8 d2joya1 b.34.5.7 (A:1-96) Ribo 93.6 0.03 2.2E-06 30.0 3.7 37 1-38 1-37 (96)
9 d1vhka1 b.122.1.2 (A:2-73) Hyp 56.0 6.1 0.00044 17.5 3.8 32 2-33 32-63 (72)
10 d1nxza1 b.122.1.2 (A:2-73) Hyp 54.3 6.5 0.00047 17.4 3.8 35 2-36 31-65 (72)
11 d1vqoq1 b.34.5.1 (Q:1-95) Ribo 46.7 8.7 0.00063 16.7 3.9 34 1-36 30-73 (95)
12 d1v29b_ b.34.4.4 (B:) Cobalt-c 35.6 13 0.00096 15.7 3.7 52 3-71 141-202 (229)
13 d1ugpb_ b.34.4.4 (B:) Cobalt-c 29.2 17 0.0012 15.1 3.7 25 3-27 138-172 (226)
14 d2exda1 b.40.12.1 (A:72-143) H 24.4 18 0.0013 14.9 2.0 24 18-41 17-40 (72)
No 1
>d2zjrr1 b.34.5.1 (R:4-113) Ribosomal proteins L24 (L24p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00 E-value=4.4e-42 Score=246.41 Aligned_cols=98 Identities=36% Similarity=0.647 Sum_probs=93.8
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCC-CCCCEEEEEEECCCHHHEEEECC-CCCEEE
Q ss_conf 7226586999984378886469999974699899906059743205777-65651799970468665788978-996228
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP-NKEAGIISKEASIHLSNLSLIDK-DGKQVR 79 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~-~~~gGii~~E~pIh~SNV~lvd~-~~k~tr 79 (102)
|+|++||+|+||||+|||++|+|++|++++++|+|||+||++||++|++ +++|||+++|+|||+|||||+|| +++|||
T Consensus 11 ~kikkGD~V~VisGkdKGk~G~Vl~V~~~~~~ViVeGvN~~kkh~Kp~~~~~~Ggiv~~E~PIhiSNV~lvdp~~~k~tr 90 (110)
T d2zjrr1 11 LHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVALVDPETGKATR 90 (110)
T ss_dssp CSSCTTSEEECCSSSSTTCEEEEEEEETTTTEEEESSSCBCCCCCCTTSSSCCCCCCCBCCCBCSSSEECBSSSSBCCCC
T ss_pred EEEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCEEEEEEEEEHHHEEEECCCCCCCEE
T ss_conf 24327999999045889961479999888999999585999987525344788874745320991127888587898548
Q ss_pred EEEEEECCEEEEEECCCCCE
Q ss_conf 89999999799998156877
Q gi|254780250|r 80 VGFSFVDGKKIRIAKRSGEP 99 (102)
Q Consensus 80 v~~~~~dG~kvRv~kksg~~ 99 (102)
|+|+++||+|+|||++||+.
T Consensus 91 v~~~~~dGkKvRv~kksGes 110 (110)
T d2zjrr1 91 VRKQIVDGKKVRVAVASGKT 110 (110)
T ss_dssp CCCCCSCTTSCCCCSSSCCC
T ss_pred EEEEEECCEEEEEEECCCCC
T ss_conf 99999199699999547899
No 2
>d2gycs1 b.34.5.1 (S:3-101) Ribosomal proteins L24 (L24p) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.8e-40 Score=235.88 Aligned_cols=96 Identities=50% Similarity=0.850 Sum_probs=90.6
Q ss_pred CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCC-C-CCCCEEEEEEECCCHHHEEEECC-CCCEEE
Q ss_conf 22658699998437888646999997469989990605974320577-7-65651799970468665788978-996228
Q gi|254780250|r 3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQT-P-NKEAGIISKEASIHLSNLSLIDK-DGKQVR 79 (102)
Q Consensus 3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~-~-~~~gGii~~E~pIh~SNV~lvd~-~~k~tr 79 (102)
||++||+|+||||+|||++|+|++|++ +++|+|||+|+++||+||+ + +++|||+++|+|||+|||||+|| +++|||
T Consensus 1 KikkGD~V~VisGkdKGK~G~V~~V~~-~~~viVeGvN~~kkh~Kp~~~~~~~Ggiv~~E~pIh~SNV~lvd~~~~k~tr 79 (99)
T d2gycs1 1 KIRRDDEVIVLTGKDKGKRGKVKNVLS-SGKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADR 79 (99)
T ss_dssp CCCTTSEEECSSSTTTTCEEEEEEECT-TSEEEETTCCEECTTCCEECCCSCCCSSCCCSCCEETTTCCSSCSSCCSCCC
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEC-CCEEEEECEEEEEEEECCCCCCCCCCCEEEEEEEEEHHHEEEECCCCCCCEE
T ss_conf 964799999906888997368999979-9969996717788872798775899978999911996677898075798548
Q ss_pred EEEEEECCEEEEEECCCCCE
Q ss_conf 89999999799998156877
Q gi|254780250|r 80 VGFSFVDGKKIRIAKRSGEP 99 (102)
Q Consensus 80 v~~~~~dG~kvRv~kksg~~ 99 (102)
++|+++||+|+|||++||+.
T Consensus 80 vg~k~edGkKvRv~kksget 99 (99)
T d2gycs1 80 VGFRFEDGKKVRFFKSNSET 99 (99)
T ss_dssp CCCCCTTSHHHHHHHSTTCC
T ss_pred EEEEEECCEEEEEEEECCCC
T ss_conf 99999799399999607999
No 3
>d2j01y1 b.34.5.1 (Y:2-102) Ribosomal proteins L24 (L24p) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.4e-40 Score=238.19 Aligned_cols=95 Identities=42% Similarity=0.627 Sum_probs=91.0
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCC-CCCCEEEEEEECCCHHHEEEECC-CCCEEE
Q ss_conf 7226586999984378886469999974699899906059743205777-65651799970468665788978-996228
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP-NKEAGIISKEASIHLSNLSLIDK-DGKQVR 79 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~-~~~gGii~~E~pIh~SNV~lvd~-~~k~tr 79 (102)
|+|++||+|+||||+|||++|+|++|++++|+|+|||+||++||++|++ +++|||+++|+|||+|||||+|| +++|||
T Consensus 4 ~kIkkGD~V~VisGkdKGk~G~Vl~V~~~~~~ViVeGvN~~kkh~k~~~~~~~Ggi~~~E~pIh~SNV~lv~~~~~k~tr 83 (101)
T d2j01y1 4 MHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKEAPLHASKVRPICPACGKPTR 83 (101)
T ss_dssp CCSCCSSCEECCSSTTSSCCBSCCCCCCTTCBCCTTSCCCCCCCCCSCCCSSCCCSSCCCCCCBGGGCEECSSSSCCCCC
T ss_pred CEEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCEEEEECCCCHHHEEEEECCCCCCEE
T ss_conf 28778999999057889970789999998999999744489985067777776624988746268995998087899578
Q ss_pred EEEEE-ECCEEEEEECCC
Q ss_conf 89999-999799998156
Q gi|254780250|r 80 VGFSF-VDGKKIRIAKRS 96 (102)
Q Consensus 80 v~~~~-~dG~kvRv~kks 96 (102)
++|++ +||+|+|+|++|
T Consensus 84 v~~~~~e~G~kvRv~kkc 101 (101)
T d2j01y1 84 VRKKFLENGKKIRVCAKC 101 (101)
T ss_dssp EECTTSSCEECCTTTCC-
T ss_pred EEEEECCCCCEEEEEECC
T ss_conf 999997799199999739
No 4
>d1vqot1 b.34.5.1 (T:1-119) Ribosomal proteins L24 (L24p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=99.89 E-value=2.9e-24 Score=149.61 Aligned_cols=71 Identities=25% Similarity=0.343 Sum_probs=65.5
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEECCC-CCEEEE
Q ss_conf 7226586999984378886469999974699899906059743205777656517999704686657889789-962288
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLIDKD-GKQVRV 80 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lvd~~-~k~trv 80 (102)
|+|++||+|+||+|+|||++|+|++|++++++|+|||+|+.++|.+ +.|+|||+|||||+||. ++++|+
T Consensus 40 ~~IkkGD~V~Vi~Gk~KGk~GkV~~V~~k~~~V~Vegin~~k~~~k----------~~~~pIh~SNv~i~~~~~~~~~R~ 109 (119)
T d1vqot1 40 VRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE----------EVPRPLDTSNVRVTDLDLEDEKRE 109 (119)
T ss_dssp EECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEETTCEEECTTSC----------EEECCBCGGGEEEEECCCCSHHHH
T ss_pred CCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEEECCEEEECCCC----------EEECCCCHHHEEEEECCCCCCHHH
T ss_conf 5142799999925478998514999987799999969189962786----------061457538979984767960464
Q ss_pred EE
Q ss_conf 99
Q gi|254780250|r 81 GF 82 (102)
Q Consensus 81 ~~ 82 (102)
++
T Consensus 110 ~~ 111 (119)
T d1vqot1 110 AR 111 (119)
T ss_dssp HH
T ss_pred HH
T ss_conf 44
No 5
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=96.72 E-value=0.00093 Score=38.24 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=31.6
Q ss_pred CCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf 2658699998437888646999997469989990
Q gi|254780250|r 4 IRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ 37 (102)
Q Consensus 4 ikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe 37 (102)
+..||.|.|++|...|-.|+|.++++.+.|+.|.
T Consensus 5 f~~Gd~V~I~~GpF~g~~g~V~~i~~~~~rv~V~ 38 (58)
T d1nppa2 5 FEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVM 38 (58)
T ss_dssp CCTTCEEEECSSTTTTCEEEEEEEEGGGTEEEEE
T ss_pred CCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEE
T ss_conf 2599999991268999899999982889999999
No 6
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.70 E-value=0.001 Score=38.01 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.7
Q ss_pred CCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
Q ss_conf 2658699998437888646999997469989990
Q gi|254780250|r 4 IRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQ 37 (102)
Q Consensus 4 ikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVe 37 (102)
++.||.|.|++|...|-.|+|.++++.+.++.|.
T Consensus 5 F~~Gd~V~I~~GpF~g~~g~V~~i~~~k~rv~V~ 38 (58)
T d1nz9a_ 5 FREGDQVRVVSGPFADFTGTVTEINPERGKVKVM 38 (58)
T ss_dssp CCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
T ss_conf 0699999990058999889999992889999999
No 7
>d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.06 E-value=0.0032 Score=35.36 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=25.8
Q ss_pred CCCCCCEEEEEECCCCCCEEEEEEEECCCCEEE
Q ss_conf 226586999984378886469999974699899
Q gi|254780250|r 3 KIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAF 35 (102)
Q Consensus 3 kikkGD~V~VisGkdKGk~G~V~~V~~k~~~Vi 35 (102)
.++.||-|.||+|++.|.+|.|+++. .+.|+
T Consensus 10 ~F~~GDhVkVi~G~~~g~tGlVV~v~--~~~v~ 40 (62)
T d2do3a1 10 YFKMGDHVKVIAGRFEGDTGLIVRVE--ENFVI 40 (62)
T ss_dssp SCCTTCEEEESSSTTTTCEEEEEEEC--SSCEE
T ss_pred CCCCCCEEEEECCEECCCCEEEEEEE--CCEEE
T ss_conf 15799858991647869628999994--99999
No 8
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=93.61 E-value=0.03 Score=30.03 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=33.9
Q ss_pred CCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEC
Q ss_conf 97226586999984378886469999974699899906
Q gi|254780250|r 1 MEKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQG 38 (102)
Q Consensus 1 M~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViVeG 38 (102)
|.-+..|--|.+++|.|+||...|+.++.. |+++|+|
T Consensus 1 m~~VevGrV~ii~~G~~~GK~~vIvdiid~-~rvLVdG 37 (96)
T d2joya1 1 MPAIEVGRICVKVKGREAGSKCVIVDIIDD-NFVLVTG 37 (96)
T ss_dssp CCSSSTTEEEECSSSSTTCCEEEEEEECSS-SCEEEEC
T ss_pred CCCEECCEEEEEEECCCCCCEEEEEEEECC-CEEEEEC
T ss_conf 994654589999606878978999999669-8699956
No 9
>d1vhka1 b.122.1.2 (A:2-73) Hypothetical protein YqeU {Bacillus subtilis [TaxId: 1423]}
Probab=56.03 E-value=6.1 Score=17.52 Aligned_cols=32 Identities=9% Similarity=0.205 Sum_probs=26.5
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCE
Q ss_conf 72265869999843788864699999746998
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGR 33 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ 33 (102)
++++.||.+.+.-|...--.+.|.++.++.-.
T Consensus 32 LR~k~Gd~i~l~dg~g~~~~~~I~~i~k~~v~ 63 (72)
T d1vhka1 32 MRMNEGDQIICCSQDGFEAKCELQSVSKDKVS 63 (72)
T ss_dssp TCCCTTCEEEEECTTSCEEEEEEEEECSSEEE
T ss_pred ECCCCCCEEEEEECCCCEEEEEEEEEECCEEE
T ss_conf 45679999999989799999999999799899
No 10
>d1nxza1 b.122.1.2 (A:2-73) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=54.31 E-value=6.5 Score=17.36 Aligned_cols=35 Identities=11% Similarity=0.278 Sum_probs=28.1
Q ss_pred CCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEE
Q ss_conf 72265869999843788864699999746998999
Q gi|254780250|r 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFV 36 (102)
Q Consensus 2 ~kikkGD~V~VisGkdKGk~G~V~~V~~k~~~ViV 36 (102)
++++.||.|.+.-|...--.++|..+.++.-.+-|
T Consensus 31 LR~k~Gd~v~l~dg~g~~~~~~I~~i~k~~~~~~i 65 (72)
T d1nxza1 31 LRMTEGEQLELFDGSNHIYPAKIIESNKKSVKVEI 65 (72)
T ss_dssp SCCCTTCEEEEECSSSEEEEEEEEEEETTEEEEEE
T ss_pred ECCCCCCEEEEEECCCCEEEEEEEEEECCEEEEEE
T ss_conf 37789999999959999999999997499899999
No 11
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=46.66 E-value=8.7 Score=16.68 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=23.2
Q ss_pred CCCCCCCCEEEEEEC----------CCCCCEEEEEEEECCCCEEEE
Q ss_conf 972265869999843----------788864699999746998999
Q gi|254780250|r 1 MEKIRTGDRVLVLAG----------KDKGKAGQVMGVVRKSGRAFV 36 (102)
Q Consensus 1 M~kikkGD~V~VisG----------kdKGk~G~V~~V~~k~~~ViV 36 (102)
|..++.||.|-+..- .+-|++|+|...-. ..++|
T Consensus 30 l~~y~~GD~V~I~idpsv~kGmPh~~yhGkTG~V~~~~g--~a~~V 73 (95)
T d1vqoq1 30 VEEFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQG--DAYKV 73 (95)
T ss_dssp HCCCCTTCEEEECCCTTCCSSCCCGGGTTCEEEEEEEET--TEEEE
T ss_pred EEECCCCCEEEEEECCCEECCCCCEEECCCCEEEEEECC--EEEEE
T ss_conf 466038989999846872518631034277545995557--59999
No 12
>d1v29b_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=35.65 E-value=13 Score=15.70 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=31.1
Q ss_pred CCCCCCEEEEEECCC----------CCCEEEEEEEECCCCEEEEECEEEEEEEECCCCCCCCEEEEEEECCCHHHEEEE
Q ss_conf 226586999984378----------886469999974699899906059743205777656517999704686657889
Q gi|254780250|r 3 KIRTGDRVLVLAGKD----------KGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTPNKEAGIISKEASIHLSNLSLI 71 (102)
Q Consensus 3 kikkGD~V~VisGkd----------KGk~G~V~~V~~k~~~ViVeGiN~~kkh~k~~~~~~gGii~~E~pIh~SNV~lv 71 (102)
++..||.|.|..-.. +||+|+|..+. | -|+-|..+-.| .-|.|-|+..|.+-
T Consensus 141 ~F~vGd~Vrv~~~~~~gHtRlP~Y~rg~~G~i~~~~---------g-----~~~~pd~~a~~---~~~~p~~lY~V~F~ 202 (229)
T d1v29b_ 141 RFEVGERIKTRNIHPTGHTRFPRYVRDKYGVIEEVY---------G-----AHVFPDDAAHR---KGENPQYLYRVRFD 202 (229)
T ss_dssp SCCTTCEEEECCCCCSSCCSCCGGGTTCEEEEEEEE---------E-----EECCHHHHTTT---SCCCCEEEEEEEEE
T ss_pred CCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEEE---------C-----CCCCCCCCCCC---CCCCCEEEEEEEEE
T ss_conf 679999899805788872126365668755999873---------6-----87896212468---99986146899884
No 13
>d1ugpb_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Pseudonocardia thermophila [TaxId: 1848]}
Probab=29.18 E-value=17 Score=15.09 Aligned_cols=25 Identities=32% Similarity=0.500 Sum_probs=19.0
Q ss_pred CCCCCCEEEEEECCC----------CCCEEEEEEE
Q ss_conf 226586999984378----------8864699999
Q gi|254780250|r 3 KIRTGDRVLVLAGKD----------KGKAGQVMGV 27 (102)
Q Consensus 3 kikkGD~V~VisGkd----------KGk~G~V~~V 27 (102)
++..||.|.|..-.. +|++|+|..+
T Consensus 138 ~F~vGd~Vrv~~~~~~gHtR~P~Y~rg~~G~I~~~ 172 (226)
T d1ugpb_ 138 KFKEGDVVRFSTASPKGHARRARYVRGKTGTVVKH 172 (226)
T ss_dssp SCCTTCEEEECCCCCSSCCCCCGGGTTCEEEEEEE
T ss_pred CCCCCCEEEECCCCCCCCEECCHHHCCCEEEEEEE
T ss_conf 35899988971589998122766666875589997
No 14
>d2exda1 b.40.12.1 (A:72-143) Hypothetical protein PH0471 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.42 E-value=18 Score=14.92 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=21.2
Q ss_pred CCCEEEEEEEECCCCEEEEECEEE
Q ss_conf 886469999974699899906059
Q gi|254780250|r 18 KGKAGQVMGVVRKSGRAFVQGVNI 41 (102)
Q Consensus 18 KGk~G~V~~V~~k~~~ViVeGiN~ 41 (102)
.|++|.++..+....+|.++|-.-
T Consensus 17 iG~~g~v~~~~~~~G~V~v~Ge~W 40 (72)
T d2exda1 17 KGKVGKVVKIAEDHYLVEVEGDKW 40 (72)
T ss_dssp TTCEEEEEECCTTCEEEEETTEEE
T ss_pred CCCEEEEEEECCCCEEEEECCEEE
T ss_conf 099999979659989999999899
Done!