PSIBLAST alignment of GI: 254780250 and protein with PDB id: 1vs6
gi|116666590|pdb|1VS6|U Chain U, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 104
>gi|116666642|pdb|1VS8|U Chain U, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 104
Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 2 EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP--NKEAGIISK 59
KIR D V+VL GKDKGK G+V V+ SG+ V+G+N+VK+HQ+ P N+ GI+ K
Sbjct: 3 AKIRRDDEVIVLTGKDKGKRGKVKNVL-SSGKVIVEGINLVKKHQKPVPALNQPGGIVEK 61
Query: 60 EASIHLSNLSLID-KDGKQVRVGFSFVDGKKIRIAKRSGEPI 100
EA+I +SN+++ + GK RVGF F DGKK+R K + E I
Sbjct: 62 EAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETI 103