PSIBLAST alignment of GI: 254780250 and protein with PDB id: 2j01

gi|116668256|pdb|2J01|Y Chain Y, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. Length = 110
>gi|116668317|pdb|2J03|Y Chain Y, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. Length = 110
 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 2   EKIRTGDRVLVLAGKDKGKAGQVMGVVRKSGRAFVQGVNIVKRHQRQTP-NKEAGIISKE 60
             ++ GD VLV +GK KG+ G+V  V+ K     V+GVNIVK+  R +P   + G I KE
Sbjct: 5   MHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVRVSPKYPQGGFIEKE 64

Query: 61  ASIHLSNLSLIDK-DGKQVRVGFSF-VDGKKIRIAKRSGEPID 101
           A +H S +  I    GK  RV   F  +GKKIR+  + G  +D
Sbjct: 65  APLHASKVRPICPACGKPTRVRKKFLENGKKIRVCAKCGGALD 107