HHsearch alignment for GI: 254780251 and conserved domain: KOG0901

Probab=100.00  E-value=2e-35  Score=225.34  Aligned_cols=121  Identities=39%  Similarity=0.512  Sum_probs=115.7

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCC----CCCCCCCCEEEEEEEE--CCCCCCCCCCCEEEEEEEEECCCEECCCC
Q ss_conf             96778689999678942999999726887----6425738889999982--05787214773789999971135176898
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSK----RKCASIGDTVVVAVKE--VIPRSKVKKGSVQKAIIVRVSYGIRRSDG   74 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~----~~~a~vGD~I~vsVk~--~~p~~k~kkg~v~~avIVrtkk~~~R~dG   74 (122)
T Consensus        19 ~~~~g~~incaDNSgAknL~~isv~g~~Grlnrl~~A~~GD~vva~vKka~~~Pe~r~k~g~~~~avvVr~~k~~~r~dg   98 (145)
T KOG0901          19 GLPVGAVINCADNSGAKNLYCISVKGIKGRLNRLPAAGVGDMVVATVKKAHGKPELRKKVGEVLPAVVVRQKKSKRRKDG   98 (145)
T ss_pred             CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCEEEEEEECCCCCCCCC
T ss_conf             34541389955787740589999721146312256777577799998504689765737423010457762110246997


Q ss_pred             CEEEECCEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             888618805999989997602266331006664179808875243129
Q gi|254780251|r   75 SVVRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        75 ~~i~F~~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
T Consensus        99 s~~~f~dnA~v~~~~~~e~~gs~i~G~v~~e~~~-~~~kias~A~~i~  145 (145)
T KOG0901          99 SIAYFEDNAGVIVNNKGEPKGSAITGPVGKELAD-LWPKIASLAGLVV  145 (145)
T ss_pred             CEEEECCCEEEEECCCCCCCCCEECCCCCHHHHH-HHHHHHHHCCCCC
T ss_conf             5888717538997466753532110666766765-4277775434449