HHsearch alignment for GI: 254780251 and conserved domain: TIGR03673
>TIGR03673 rpl14p_arch 50S ribosomal protein L14P. Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L24e, part of which may contact the 16S rRNA in 2 intersubunit bridges.
Probab=100.00 E-value=0 Score=304.51 Aligned_cols=118 Identities=39% Similarity=0.598 Sum_probs=110.9
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECC--CCCC--CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf 96778689999678942999999726--8876--4257388899999820578721477378999997113517689888
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLG--GSKR--KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV 76 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~--~~~~--~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~ 76 (122)
T Consensus 10 ~Iq~~t~l~vaDNSGAk~v~cI~V~g~~g~k~r~~~A~vGD~IvvsVkk~~p~~---k~~v~~AVIVRtkk~~rR~DGs~ 86 (131)
T TIGR03673 10 ALPVGSLLVCADNTGAKEVEVISVKGYKGVKRRLPCAGVGDMVVVSVKKGTPEM---RKQVFKAVVVRQRKEYRRPDGTR 86 (131)
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCC---CCCEEEEEEEEECCCEECCCCCE
T ss_conf 137577799820888568999999677775233665751739999994078875---58878879999757669089999
Q ss_pred EEECCEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf 8618805999989997602266331006664179808875243129
Q gi|254780251|r 77 VRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV 122 (122)
Q Consensus 77 i~F~~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi 122 (122)
T Consensus 87 i~FddNa~VLin~~g~P~GTRI~GPV~rEl~~k-~~KI~slA~~vV 131 (131)
T TIGR03673 87 VKFEDNAVVIVTPDGEPKGTEIKGPVAREAAER-WPKIASIASIIV 131 (131)
T ss_pred EEECCCEEEEECCCCCEEEEEEECCCHHHHHHH-HHHHHHCCCCCC
T ss_conf 981897699998999990617826404998851-258875044329