HHsearch results for GI: 254780251 and protein with PDBid: 2j01_O
>2j01_O 50S ribosomal protein L14; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.39.1.1 PDB: 2j03_O 2jl6_O 2jl8_O 2v47_O 2v49_O 2wdi_O 2wdj_O 2wdl_O 2wdn_O 2wh2_O 2wh4_O 2wrj_O 2wrl_O 2wro_O 2wrr_O 2x9s_O 2x9u_O 2xg0_O 2xg2_O 3fin_O ...
Probab=100.00 E-value=0 Score=319.28 Aligned_cols=122 Identities=57% Similarity=0.881 Sum_probs=120.6
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf 96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD 80 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~ 80 (122)
|||.+|+|+|+|||||++++||++|+++++++|++||+|++|||+++|+++++||++++|+||||||+++|.||++++||
T Consensus 1 MIq~~T~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~i~vsVk~~~~~~~vkkg~v~~avIVrtkk~~~R~dG~~i~F~ 80 (122)
T 2j01_O 1 MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKAVVVRTKKEIKRPDGSAIRFD 80 (122)
T ss_dssp CCCTTCEEEECSSSSCCEEEEEEECSSTTCCCCCTTCEEEEEEEECCTTCSSCSSCEEEEEEEECSSCEECTTSCEEECS
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEEEEEEECCEECCCCCEEEEC
T ss_conf 97666679984689987899999977788526767858999998326688435020504889986042084999999808
Q ss_pred CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf 805999989997602266331006664179808875243129
Q gi|254780251|r 81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV 122 (122)
Q Consensus 81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi 122 (122)
||||||+|++++|+||||+||+|+|||+++|+||+|||++||
T Consensus 81 ~Na~VLi~~~~~p~GTrI~Gpv~~elr~~~~~Ki~slA~~ii 122 (122)
T 2j01_O 81 DNAAVIINNQLEPRGTRVFGPVARELREKGFMKIVSLAPEVL 122 (122)
T ss_dssp SCEEEEECTTSCCSSSCCCSCCCTHHHHHCCHHHHHHCSCCC
T ss_pred CCEEEEECCCCCEEEEEEECCCCHHHHHCCCCHHEECCCCCC
T ss_conf 987999989999903479435009986468833203541009