HHsearch results for GI: 254780251 and protein with PDBid: 2zkr_k
>2zkr_k 60S ribosomal protein L23; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1i_R 2x7n_C 3jyw_R
Probab=100.00 E-value=0 Score=290.39 Aligned_cols=117 Identities=31% Similarity=0.470 Sum_probs=110.9
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEECCCCCC----CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf 967786899996789429999997268876----4257388899999820578721477378999997113517689888
Q gi|254780251|r 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKR----KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV 76 (122)
Q Consensus 1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~----~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~ 76 (122)
|||.+|+|+|+|||||++++||++++++++ ++|.+||+|++|||++.|. +||++++|+|||||++++|+||++
T Consensus 19 ~iq~~T~l~V~DNSGak~v~cI~v~~~~~~~~~~~~a~iGD~I~vsVk~~~~~---~k~~v~~avIVrtkk~~~R~dG~~ 95 (140)
T 2zkr_k 19 GLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPE---LRKKVHPAVVIRQRKSYRRKDGVF 95 (140)
T ss_dssp CEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEECTTCEEEEEEEEECTT---TTTCEEEEEEEECSSCEECTTSCE
T ss_pred ECCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCC---CCCCEEEEEEEEECCCEECCCCCE
T ss_conf 54537889986388874899999977678432356674507999999347885---543417988888714058699988
Q ss_pred EEECCEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCC
Q ss_conf 861880599998999760226633100666417980887524312
Q gi|254780251|r 77 VRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEV 121 (122)
Q Consensus 77 i~F~~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~v 121 (122)
++||||||||||++++|+||||||||++|||++ |+||+|||++|
T Consensus 96 i~FddNavVLl~~~~~P~GTRI~GPV~~Elr~k-~~kI~slA~~i 139 (140)
T 2zkr_k 96 LYFEDNAGVIVNNKGEMKGSAITGPVAKECADL-WPRIASNAGSI 139 (140)
T ss_dssp ECCSSCEEEEBCTTSCBSSSCBCSCCCHHHHHH-CHHHHTTCSCC
T ss_pred EEECCCEEEEECCCCCEEEEEEECCHHHHHHHH-HHHHHHCCCCC
T ss_conf 980897699998999880416806353999876-13876435323