HHSEARCH alignment of GI: 254780251 and SCOP domain: d1vqok1

Alignment
>d1vqok1 b.39.1.1 (K:1-132) Ribosomal protein L14 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00  E-value=0  Score=297.97  Aligned_cols=118  Identities=34%  Similarity=0.519  Sum_probs=111.3

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCC----CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCE
Q ss_conf             967786899996789429999997268876----4257388899999820578721477378999997113517689888
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKR----KCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSV   76 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~----~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~   76 (122)
                      |||.+|+|+|+|||||+.++||++++++.+    ++|++||+|++|||++.|+   +||++++|+|||||++++|+||++
T Consensus        11 ~Iq~~s~L~v~DNSGak~v~cI~V~~~~~~k~r~~~a~vGD~IvvsVk~~~~~---~k~~v~~AvIVrtkk~~~R~dG~~   87 (132)
T d1vqok1          11 GLEKGSLITCADNTGARELKVISVHGYSGTKNRLPKAGLGDKITVSVTKGTPE---MRRQVLEAVVVRQRKPIRRPDGTR   87 (132)
T ss_dssp             CEETTCEEEECBSSSEEEEEEEEETTCCCCTTCCCEECTTCEEEEEEEEECTT---TTTCEEEEEEEECSSCEECTTSCE
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCC---CCCCEEEEEEEEECCCEECCCCCE
T ss_conf             13516789982188876699999945456445465465050999999406777---666607999998567478799998


Q ss_pred             EEECCEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             8618805999989997602266331006664179808875243129
Q gi|254780251|r   77 VRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        77 i~F~~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
                      ++||||||||+|++++|+|||||||||+|||++ |+||+|||++||
T Consensus        88 i~FddNa~VLi~~~~~p~GTRI~GpV~~Elr~k-~~Ki~sLA~~iv  132 (132)
T d1vqok1          88 VKFEDNAAVIVDENEDPRGTELKGPIAREVAQR-FGSVASAATMIV  132 (132)
T ss_dssp             EEESSCEEEEECTTSCBSSSCBCSCBCHHHHHH-SHHHHTTCSCBC
T ss_pred             EECCCCEEEEECCCCCEEEEEEECCHHHHHHHH-HHHHHHCCCCCC
T ss_conf             981797799998999992607956476999865-058885120019


SCOP domain information

class: All beta proteins
fold: Ribosomal protein L14
superfamily: Ribosomal protein L14
family: Ribosomal protein L14
domain: Ribosomal protein L14
species: Archaeon Haloarcula marismortui [TaxId: 2238]