HHSEARCH alignment of GI: 254780251 and SCOP domain: d1whia_

Alignment
>d1whia_ b.39.1.1 (A:) Ribosomal protein L14 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00  E-value=0  Score=324.94  Aligned_cols=122  Identities=56%  Similarity=0.849  Sum_probs=120.6

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEC
Q ss_conf             96778689999678942999999726887642573888999998205787214773789999971135176898888618
Q gi|254780251|r    1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKAIIVRVSYGIRRSDGSVVRFD   80 (122)
Q Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~p~~k~kkg~v~~avIVrtkk~~~R~dG~~i~F~   80 (122)
                      |||.+|+|+|+|||||+.++||++++++++++|++||+|++|||+++|+++++||++++|+||||||+++|+||++++||
T Consensus         1 MIq~~t~l~v~DNSGak~v~cI~v~~~~~~~~a~vGD~I~vsVk~~~~~~~vkkg~v~~AvIVrtkk~~~R~dG~~i~F~   80 (122)
T d1whia_           1 MIQQESRLKVADNSGAREVLVIKVLGGSGRRYANIGDVVVATVKDATPGGVVKKGQVVKAVVVRTKRGVRRPDGSYIRFD   80 (122)
T ss_dssp             CBCTTCEEEECBSSSEEEEEEEEECSSTTCCCBCTTCEEEEEEEEECTTSSSCTTCEEEEEEEECSSCEECTTSCEECCS
T ss_pred             CCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCCCEEEEEEEEEEEEECCCCCEEEEC
T ss_conf             97657679874689987899999978878511332879999992301377067265102589988631431688668858


Q ss_pred             CEEEEEECCCCCEECCEEECCHHHHHHCCCCEEEEEECCCCC
Q ss_conf             805999989997602266331006664179808875243129
Q gi|254780251|r   81 KNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAEVV  122 (122)
Q Consensus        81 ~Na~VLin~~~~p~GtRI~Gpv~~elr~~~~~Ki~slA~~vi  122 (122)
                      ||||||+|++++|+|||||||+|+|||+++|+||+||||+||
T Consensus        81 ~Na~VLl~~~~~P~GTrI~Gpv~~elr~~~~~Ki~sLA~~vi  122 (122)
T d1whia_          81 ENACVIIRDDKSPRGTRIFGPVARELRDKDFMKIISLAPEVI  122 (122)
T ss_dssp             SCEEEEECTTSCBSSSCBCSCBCTHHHHTTCHHHHHHCSCBC
T ss_pred             CCEEEEECCCCCEEEEEEECCCHHHHHHCCCCHHHCCCCHHC
T ss_conf             987999979999912369504019986468825650420029


SCOP domain information

class: All beta proteins
fold: Ribosomal protein L14
superfamily: Ribosomal protein L14
family: Ribosomal protein L14
domain: Ribosomal protein L14
species: Bacillus stearothermophilus [TaxId: 1422]