PSIBLAST alignment of GI: 254780251 and protein with PDB id: 2hgj
gi|119389744|pdb|2HGJ|N Chain N, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. Length = 122
>gi|119389801|pdb|2HGQ|N Chain N, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. Length = 122
Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/122 (55%), Positives = 91/122 (74%)
Query: 1 MIQMQTSLSISDNSGARLVKCIKVLGGSKRKCASIGDTVVVAVKEVIPRSKVKKGSVQKA 60
MIQ QT L ++DN+GAR + CI+VL GS K A++GD +V +VKE IPR VK+G V KA
Sbjct: 1 MIQPQTYLEVADNTGARKIMCIRVLKGSNAKYATVGDVIVASVKEAIPRGAVKEGDVVKA 60
Query: 61 IIVRVSYGIRRSDGSVVRFDKNAAVLIDNKKDLLASRVFGPVPRELRIKGHLKILSLAAE 120
++VR ++R DGS +RFD NAAV+I+N+ + +RVFGPV RELR KG +KI+SLA E
Sbjct: 61 VVVRTKKEVKRPDGSAIRFDDNAAVIINNQLEPRGTRVFGPVARELREKGFMKIVSLAPE 120
Query: 121 VV 122
V+
Sbjct: 121 VL 122