HHsearch alignment of GI: 254780252 and MMDB domain: 2zkq_q_

>2zkq_q (q:) 40S ribosomal protein S11E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_Q
Probab=99.97  E-value=1.3e-30  Score=188.47  Aligned_cols=78  Identities=24%  Similarity=0.420  Sum_probs=74.5

Q ss_pred             CCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCEEEEECCCC--CCCCCCCEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf             973479999996089861999997188786413087351038986886--604068789999637754320399997640
Q gi|254780252|r    1 MPKRVLQGMVVSDKSEKTIIVLVERRFSHPRFQKTIRRSKRYAVHDEN--NKYKVGDFVSIEESAPISKKKSWLVIDSEG   78 (79)
Q Consensus         1 m~~k~l~G~Vvs~km~KTv~V~v~r~~~~~ky~K~~~~~kk~~vHD~~--~~~~~GD~V~i~e~rPiSK~K~~~vve~~~   78 (79)
                      |++|+|.|+|+|++|+|||+|+++|++|||+|+||++++++|+||||.  |+|++||+|+|+|||||||+|+|+|+++..
T Consensus        68 irgril~G~VvS~KM~KTvvV~v~~~~~~~kY~K~~kr~kky~aHd~~~~n~~kvGD~V~I~EcRPlSKtkrf~V~~Ii~  147 (158)
T 2zkq_q           68 IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTK  147 (158)
T ss_dssp             ---CEEEEEEEECSSSCEEEEEEEEECSSTTCCCEEEEEEEECCBCCSSCCCC-CCCEEEEECCSCSSSCC-CEEEEEEE
T ss_pred             EEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCHHCCCCCCCCEEEEEECCCCCCCEEEEEEEEEE
T ss_conf             61489999999633888779999999962643229885066899883220768899999998755688848799999987