HHsearch results for GI: 254780252 and protein with PDBid: 2zkq_q

>2zkq_q 40S ribosomal protein S11E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_Q* 1s1h_Q

Probab=99.96  E-value=3e-30  Score=185.58  Aligned_cols=76  Identities=25%  Similarity=0.415  Sum_probs=72.3

Q ss_pred             CEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCEEEEECCCCC--CCCCCCEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf             34799999960898619999971887864130873510389868866--04068789999637754320399997640
Q gi|254780252|r    3 KRVLQGMVVSDKSEKTIIVLVERRFSHPRFQKTIRRSKRYAVHDENN--KYKVGDFVSIEESAPISKKKSWLVIDSEG   78 (79)
Q Consensus         3 ~k~l~G~Vvs~km~KTv~V~v~r~~~~~ky~K~~~~~kk~~vHD~~~--~~~~GD~V~i~e~rPiSK~K~~~vve~~~   78 (79)
                      .|+|.|+|+|++|+|||+|+++|+++||+|+||++++++|+||||.+  +|++||.|.|+|||||||+|+|+|+|+..
T Consensus        70 Gril~G~VvS~KM~KTvvV~v~~~~~~~KY~Ry~kr~kk~~aHd~~~~~~~k~GD~V~I~EcRPlSKtKrf~Vv~V~k  147 (158)
T 2zkq_q           70 GRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTK  147 (158)
T ss_dssp             -CEEEEEEEECSSSCEEEEEEEEECSSTTCCCEEEEEEEECCBCCSSCCCC-CCCEEEEECCSCSSSCC-CEEEEEEE
T ss_pred             EEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEE
T ss_conf             899999999633887679999999951655279995277898477421548999999999777777617799999987