HHsearch results for GI: 254780253 and protein with PDBid: 1vq8_V
>1vq8_V 50S ribosomal protein L29P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.2.2.1 PDB: 1vq4_V* 1vq5_V* 1vq6_V* 1vq7_V* 1s72_V* 1vq9_V* 1vqk_V* 1vql_V* 1vqm_V* 1vqn_V* 1vqo_V* 1vqp_V* 1yhq_V* 1yi2_V* 1yij_V* 1yit_V* 1yj9_V* 1yjn_V* 1yjw_V* 2otj_V* ...
Probab=99.81 E-value=7e-20 Score=138.04 Aligned_cols=66 Identities=30% Similarity=0.405 Sum_probs=63.3
Q ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 988899972999999999999999999999-999537865469999999999999999999998532
Q gi|254780253|r 1 MLKFKDISVMSIDQLTEKLIQLKKDQMSLR-FQKASGQIEKPFRMREVSRDIARIKTMMNSRVFKNN 66 (67)
Q Consensus 1 mmk~~elr~~s~~eL~~~l~~l~~el~~lr-fq~~~gql~np~~ir~~Rk~IARi~Tvl~er~~~~~ 66 (67)
|||++|||++|.+||.+++.++++|||+|| ||+++||++|||+|+.+||+||||+||++|+..++.
T Consensus 3 ~mk~~elR~~s~eeL~~~l~elk~el~~LR~~q~~~gql~~~~~ir~~Rk~IARi~Til~Ek~~~~~ 69 (71)
T 1vq8_V 3 VLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGDLQE 69 (71)
T ss_dssp CSCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6879999869999999999999999999999999818877708999999999999999999986250