HHSEARCH alignment of GI: 254780253 and SCOP domain: d2j0121

Alignment

Probab=99.34  E-value=3.9e-16  Score=114.32  Aligned_cols=51  Identities=31%  Similarity=0.518  Sum_probs=49.9

Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             997299999999999999999999999953786546999999999999999
Q gi|254780253|r    6 DISVMSIDQLTEKLIQLKKDQMSLRFQKASGQIEKPFRMREVSRDIARIKT   56 (67)
Q Consensus         6 elr~~s~~eL~~~l~~l~~el~~lrfq~~~gql~np~~ir~~Rk~IARi~T   56 (67)
                      |||+||++||.+++.+++++||+||||+++||++|||+|+.+||+||||+|
T Consensus         1 EiR~ls~~eL~~~l~elk~el~~LRfq~atgql~n~~~ik~~rk~IARi~T   51 (51)
T d2j0121           1 EARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLT   51 (51)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHSSSSCCTTSSTTTGGGTTSSSSSCCCCCCC-
T ss_pred             CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf             936579999999999999999999999987887664899999999887357

SCOP domain information

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Ribosomal protein L29 (L29p)
family: Ribosomal protein L29 (L29p)
domain: Ribosomal protein L29 (L29p)
species: Thermus thermophilus [TaxId: 274]