HHsearch results for GI: 254780254 and protein with PDBid: 2zjr_J

>2zjr_J 50S ribosomal protein L16; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.41.4.2 PDB: 1sm1_K* 2zjp_J* 2zjq_J 1nkw_K 3cf5_J* 3dll_J* 1nwy_K* 1njm_K* 1nwx_K* 1njp_K* 1xbp_K* 1y69_K 1pnu_K 1pny_K 1vor_N 1vou_N 1vow_N 1voy_N 1vp0_N 1wki_A ...
Probab=100.00  E-value=0  Score=372.56  Aligned_cols=137  Identities=53%  Similarity=0.922  Sum_probs=135.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECC
Q ss_conf             99888775510678989723477875312131032740531325999999999999742678468987549860786215
Q gi|254780254|r    1 MLRQPKNTKYPKQFKGRIKGVAKGGSRICFGNFALKAQEANRIGSSEIEAARRAISRGMKRAGRVWICVFPDVPVTAKPT   80 (138)
Q Consensus         1 mml~Pk~~KyrK~~kgr~~g~~~~~~~l~fG~yGL~a~e~g~it~~qiEaaR~~i~R~lkk~gkiwirv~P~~pvTkKp~   80 (138)
                      |||+||+|||+|+|||+++|.++++|.|.||+|||+|+|+|+||++||||||++|+|+|++.|++|||||||.|||+||+
T Consensus         1 mml~PKrtKyrK~~kgr~~g~~~~~~~l~fG~yGl~a~~~g~it~~qiEa~R~~I~r~lkr~gk~wirv~p~~pvTkKp~   80 (142)
T 2zjr_J            1 MMLLPKRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPA   80 (142)
T ss_dssp             -----CCCSSCCCCCCCCCCSCSSCCSSSSSSCEEEECSCBCCBHHHHHHHHHHHHHHCSSCCCCCCCCCCCCEECCCSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC
T ss_conf             98887754312566899877477888862324135981263342999999999999750328449999789974265665


Q ss_pred             CCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf             440014478811069983215089997497999999999998543895179999862
Q gi|254780254|r   81 EVRMGKGKGNVEKWVCRVKPGRILFEIDGVSEEVARRAFRLGAAKLSVVTKFIQRVV  137 (138)
Q Consensus        81 e~RMGkGKG~~~~wv~~Vk~G~ilfEi~gi~~~~a~~al~~a~~KLP~k~k~i~k~~  137 (138)
                      |+|||+|||++|||||+|+||+||||++|+++++|++||+++++|||++|+||+|++
T Consensus        81 e~RMGkGKG~i~~wv~~Vk~G~ilfEi~gv~~~~a~~al~~aa~KLP~k~k~I~r~~  137 (142)
T 2zjr_J           81 ETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKREV  137 (142)
T ss_dssp             SCCCSSSCCTTSEEBCCBCTTEEEECCCSSCSTTTTTHHHHHHHTCSSCEEEECSCC
T ss_pred             CCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             454678888800079997789799997798999999999998752797379997164