HHsearch results for GI: 254780254 and protein with PDBid: 2zjr_J
>2zjr_J 50S ribosomal protein L16; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.41.4.2 PDB: 1sm1_K* 2zjp_J* 2zjq_J 1nkw_K 3cf5_J* 3dll_J* 1nwy_K* 1njm_K* 1nwx_K* 1njp_K* 1xbp_K* 1y69_K 1pnu_K 1pny_K 1vor_N 1vou_N 1vow_N 1voy_N 1vp0_N 1wki_A ...
Probab=100.00 E-value=0 Score=372.56 Aligned_cols=137 Identities=53% Similarity=0.922 Sum_probs=135.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECC
Q ss_conf 99888775510678989723477875312131032740531325999999999999742678468987549860786215
Q gi|254780254|r 1 MLRQPKNTKYPKQFKGRIKGVAKGGSRICFGNFALKAQEANRIGSSEIEAARRAISRGMKRAGRVWICVFPDVPVTAKPT 80 (138)
Q Consensus 1 mml~Pk~~KyrK~~kgr~~g~~~~~~~l~fG~yGL~a~e~g~it~~qiEaaR~~i~R~lkk~gkiwirv~P~~pvTkKp~ 80 (138)
|||+||+|||+|+|||+++|.++++|.|.||+|||+|+|+|+||++||||||++|+|+|++.|++|||||||.|||+||+
T Consensus 1 mml~PKrtKyrK~~kgr~~g~~~~~~~l~fG~yGl~a~~~g~it~~qiEa~R~~I~r~lkr~gk~wirv~p~~pvTkKp~ 80 (142)
T 2zjr_J 1 MMLLPKRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPA 80 (142)
T ss_dssp -----CCCSSCCCCCCCCCCSCSSCCSSSSSSCEEEECSCBCCBHHHHHHHHHHHHHHCSSCCCCCCCCCCCCEECCCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC
T ss_conf 98887754312566899877477888862324135981263342999999999999750328449999789974265665
Q ss_pred CCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf 440014478811069983215089997497999999999998543895179999862
Q gi|254780254|r 81 EVRMGKGKGNVEKWVCRVKPGRILFEIDGVSEEVARRAFRLGAAKLSVVTKFIQRVV 137 (138)
Q Consensus 81 e~RMGkGKG~~~~wv~~Vk~G~ilfEi~gi~~~~a~~al~~a~~KLP~k~k~i~k~~ 137 (138)
|+|||+|||++|||||+|+||+||||++|+++++|++||+++++|||++|+||+|++
T Consensus 81 e~RMGkGKG~i~~wv~~Vk~G~ilfEi~gv~~~~a~~al~~aa~KLP~k~k~I~r~~ 137 (142)
T 2zjr_J 81 ETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKREV 137 (142)
T ss_dssp SCCCSSSCCTTSEEBCCBCTTEEEECCCSSCSTTTTTHHHHHHHTCSSCEEEECSCC
T ss_pred CCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 454678888800079997789799997798999999999998752797379997164