HHsearch results for GI: 254780254 and protein with PDBid: 2zkr_h

>2zkr_h 60S ribosomal protein L10; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1i_I 3jyw_I
Probab=100.00  E-value=2.8e-36  Score=226.75  Aligned_cols=115  Identities=19%  Similarity=0.150  Sum_probs=103.8

Q ss_pred             CCCCCCCCCCHH-HCCEEECCCEEECHHHHHHHHHHHHHHC-----CCCCEEEEEECCCCEEEEECC---------CCCC
Q ss_conf             347787531213-1032740531325999999999999742-----678468987549860786215---------4400
Q gi|254780254|r   20 GVAKGGSRICFG-NFALKAQEANRIGSSEIEAARRAISRGM-----KRAGRVWICVFPDVPVTAKPT---------EVRM   84 (138)
Q Consensus        20 g~~~~~~~l~fG-~yGL~a~e~g~it~~qiEaaR~~i~R~l-----kk~gkiwirv~P~~pvTkKp~---------e~RM   84 (138)
                      .++.+++...|+ .+.|+|+|+++|+++||||||++++|+|     ++++++|||+|||+|+|.+|.         |+||
T Consensus        36 mGn~k~~~~~f~~~~~L~a~e~~qI~~~alEAARia~nr~l~k~~Gk~~~~l~iRv~P~~~lr~nk~~s~aGAdrl~~gM  115 (214)
T 2zkr_h           36 LGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGM  115 (214)
T ss_dssp             EECSSSCSTTCSEEEEEEESSCEEEEHHHHHHHHHHHHHHHHHHHCTTCCEEEECCCCCEEEEECTTTCCSSCSSTTSSS
T ss_pred             CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             67776664535628999876774327889999999999988764165675799996898146752310024555312355


Q ss_pred             CCCCCCCCEEEEEECCCEEEEEECCC--CHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             14478811069983215089997497--999999999998543895179999
Q gi|254780254|r   85 GKGKGNVEKWVCRVKPGRILFEIDGV--SEEVARRAFRLGAAKLSVVTKFIQ  134 (138)
Q Consensus        85 GkGKG~~~~wv~~Vk~G~ilfEi~gi--~~~~a~~al~~a~~KLP~k~k~i~  134 (138)
                      |+|||+|++|+|+|++|++|||+.+.  +++.|++||++|++|||++|+||.
T Consensus       116 g~gkGkp~~~aArV~~G~iifei~~~~~~~~~akeALrrA~~KLP~~~kIvv  167 (214)
T 2zkr_h          116 RGAFGKPQGTVAKVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHI  167 (214)
T ss_dssp             TTCCCEEEEEEEEECTTCEEEEEEECSTTHHHHHHHHHHHHHTSSSCEEEEE
T ss_pred             CCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             6787887769998559988999985167889999999986054899759999