HHSEARCH alignment of GI: 254780254 and SCOP domain: d1vqoh1

Alignment
>d1vqoh1 d.41.4.1 (H:1-163) Ribosomal protein L10e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=100.00  E-value=3.2e-37  Score=230.76  Aligned_cols=100  Identities=20%  Similarity=0.273  Sum_probs=93.8

Q ss_pred             CCEEECCCEEECHHHHHHHHHHHHHHCCC------CCEEEEEECCCCEEEEECC---------CCCCCCCCCCCCEEEEE
Q ss_conf             03274053132599999999999974267------8468987549860786215---------44001447881106998
Q gi|254780254|r   33 FALKAQEANRIGSSEIEAARRAISRGMKR------AGRVWICVFPDVPVTAKPT---------EVRMGKGKGNVEKWVCR   97 (138)
Q Consensus        33 yGL~a~e~g~it~~qiEaaR~~i~R~lkk------~gkiwirv~P~~pvTkKp~---------e~RMGkGKG~~~~wv~~   97 (138)
                      ++|+++|+++|+++||||||++++|+|++      .+++|||||||+|||++|.         |+|||+|||++++|||+
T Consensus        47 ~~L~a~e~~~i~~~~iEAaR~a~~r~l~k~~G~~~~~~~~irvfP~~~v~~kp~~~~agadrl~~~Mg~gkG~p~~~aAr  126 (163)
T d1vqoh1          47 ISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAAR  126 (163)
T ss_dssp             EEEEESSCEEEEHHHHHHHHHHHHHHHHHHHCTTCSCEEEECCCCCEEEEECC-----------CCSTTCCCEEEEEEEE
T ss_pred             EEEEECCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             99987366024389999999999750144327556606999956761055274452013001034556787885389999


Q ss_pred             ECCCEEEEEECCCC--HHHHHHHHHHHHHHCCCEEEE
Q ss_conf             32150899974979--999999999985438951799
Q gi|254780254|r   98 VKPGRILFEIDGVS--EEVARRAFRLGAAKLSVVTKF  132 (138)
Q Consensus        98 Vk~G~ilfEi~gi~--~~~a~~al~~a~~KLP~k~k~  132 (138)
                      |++|+||||+.+++  .+.|++||++|++|||++|+|
T Consensus       127 Vk~G~ilfei~~~~~~~~~akeALr~A~~KLP~~tkI  163 (163)
T d1vqoh1         127 VQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRI  163 (163)
T ss_dssp             ECTTCEEEEEEECSTTHHHHHHHHHHHGGGSSSCEEE
T ss_pred             ECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEC
T ss_conf             8799899999742316899999999873428996079


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Ribosomal protein L16p/L10e
family: Ribosomal protein L10e
domain: Ribosomal protein L10e
species: Archaeon Haloarcula marismortui [TaxId: 2238]