RPSBLAST alignment of GI: 254780254 and protein with PDBid: 1ffk
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ... Length = 157
Score = 103 bits (258), Expect = 2e-23
Identities = 25/149 (16%), Positives = 45/149 (30%), Gaps = 15/149 (10%)
Query: 1 MLRQPKNTKYPK-QFKGRIKGVA----KGGSRICFGNF----ALKAQEANRIGSSEIEAA 51
R Y + ++ I G K G+ + ++ +I + +EAA
Sbjct: 5 HFRNSIKPAYTRREYISGIPGKGIAQFKMGNNGAGPTYPAQVENVVEKPVQIRHNALEAA 64
Query: 52 RRAISRGMKRAG-----RVWICVFPDVPVTAKPTEVRMGKGKGNVEKWVCRVKPGRILFE 106
R A +R ++ +G + I FP V + M G R F
Sbjct: 65 RNAANRFVQNSGAAANYKFRIRKFPF-HVIREQDGDGMRAPFGKSVGTAARSHGANHDFI 123
Query: 107 IDGVSEEVARRAFRLGAAKLSVVTKFIQR 135
+ A+R K++
Sbjct: 124 AWVNPDPAVEFAWRRAYMKVTPTVNIDSS 152