RPSBLAST alignment of GI: 254780254 and protein with PDBid: 1vq8
>1vq8_H 50S ribosomal protein L10E; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1vq4_H* 1vq5_H* 1vq6_H* 1vq7_H* 1s72_H* 1vq9_H* 1vqk_H* 1vql_H* 1vqm_H* 1vqn_H* 1vqo_H* 1vqp_H* 2otj_H* 2otl_H* 2qa4_H* 2qex_H* 1yhq_H* 1yi2_H* 1yij_H* 1yit_H* ... Length = 171
Score = 90.7 bits (225), Expect = 1e-19
Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 31/162 (19%)
Query: 1 MLRQPKNTKYPKQFKGRIKGVAK--------GGSRICFGNF----ALKAQEANRIGSSEI 48
M R Y + + I G+ G + ++ +L +E ++ +
Sbjct: 5 MYRDIDKPAYTR--REYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSL 62
Query: 49 EAARRAISR------GMKRAGRVWICVFPDVPVTAKPTEVR---------MGKGKGNVEK 93
EA+R + +R G + ++ + FP + M G +
Sbjct: 63 EASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVG 122
Query: 94 WVCRVKPGRILFEIDGVSE--EVARRAFRLGAAKLSVVTKFI 133
RV+ G LF E E + AFR K++ +
Sbjct: 123 TAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRID 164