HHsearch alignment of GI: 254780255 and MMDB domain: 1ega_A_182-284

>1ega_A (A:182-284) Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli}
Probab=96.83  E-value=0.006  Score=36.59  Aligned_cols=79  Identities=28%  Similarity=0.396  Sum_probs=55.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEEC---CCC---CEEEEEECCC---CCCCCCCCHHHHHH----HHHH
Q ss_conf             125799998999999999877422--6422155325---885---1899997374---10013565348998----9876
Q gi|254780255|r   27 SEYGALLHEDLKIREYLQCHLKQA--GVAKILIERT---HKN---CRIIVYSARP---GLIIGKKGTDIEKI----RKKL   91 (227)
Q Consensus        27 k~Y~~~L~eD~~IR~fi~k~l~~a--gis~i~I~Rt---~~~---i~I~I~~~kP---~~iiGkkg~~i~~l----~~~L   91 (227)
                      .....++.|  .||+.+..+++..  .-..++|++-   .++   +...|++.++   +++||++|..++++    +..|
T Consensus         7 ~~~~~~i~E--iIReki~~~l~~EiPy~~~v~ie~~~~~~~~~l~I~~~I~v~k~sqk~ivIGk~G~~ik~I~~~ar~~L   84 (103)
T 1ega_A            7 RSQRFMASE--IIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDM   84 (103)
T ss_dssp             CSHHHHHHH--HHHHHHHHHHGGGCCTTEEEEEEEEECCSSCSEEEEEEEEESSHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHH--HHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             666675788--858888753564463466899999997489957999999997689457998799725899999999999


Q ss_pred             HCCCCCEEEEEE-EEEC
Q ss_conf             403587057879-9813
Q gi|254780255|r   92 SNMTNSEIHLSV-NEVP  107 (227)
Q Consensus        92 ~~~~~~~v~i~v-~ei~  107 (227)
                      +++|+.++.+++ .+++
T Consensus        85 ~~l~~~~V~L~L~Vkv~  101 (103)
T 1ega_A           85 QEMFEAPVHLELWVKVK  101 (103)
T ss_dssp             HHHTTSCEEEEEEEEET
T ss_pred             HHHHCCCEEEEEEEEEC
T ss_conf             99849986999999967