HHsearch alignment of GI: 254780255 and MMDB domain: 3gku_A_61-140

>3gku_A (A:61-140) Probable RNA-binding protein; APC21302, structural genomics, PSI-2, protein structure initiative; 2.95A {Clostridium symbiosum atcc 14940}
Probab=95.43  E-value=0.01  Score=35.27  Aligned_cols=59  Identities=25%  Similarity=0.435  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHCCCC-CEEEEE--CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             9999999877422642-215532--5885189999737410013565348998987640358
Q gi|254780255|r   38 KIREYLQCHLKQAGVA-KILIER--THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN   96 (227)
Q Consensus        38 ~IR~fi~k~l~~agis-~i~I~R--t~~~i~I~I~~~kP~~iiGkkg~~i~~l~~~L~~~~~   96 (227)
                      .+++|++..+...|+. .+.|.-  ..+.+.+.|....++++|||+|+.++.|+..++...+
T Consensus         5 ~~~~~L~~il~~mg~~~~v~i~~~~~~~~i~i~i~g~~~g~LIGk~G~tL~ALQ~L~~~~~~   66 (80)
T 3gku_A            5 KAIEFLEQVFDAXNXAVDISVEYNETEKEXNVNLKGDDXGILIGKRGQTLDSLQYLVSLVVN   66 (80)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEEEETTTTEEEEEEECHHHHHCSTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             66899999999769964899999548538999943750543226970678999999999998