BLAST/PSIBLAST alignment of GI: 254780255 and GI: 86357311 at iteration 1
>gi|86357311|ref|YP_469203.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42] Length = 244
>gi|190891361|ref|YP_001977903.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652] Length = 244
>gi|123765804|sp|Q2K9L0|RS3_RHIEC RecName: Full=30S ribosomal protein S3 Length = 244
>gi|226697748|sp|B3PWS7|RS3_RHIE6 RecName: Full=30S ribosomal protein S3 Length = 244
>gi|86281413|gb|ABC90476.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42] Length = 244
>gi|190696640|gb|ACE90725.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652] Length = 244
>gi|327191391|gb|EGE58417.1| ribosomal protein S3 [Rhizobium etli CNPAF512] Length = 244
 Score =  320 bits (820), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 189/227 (83%), Gaps = 3/227 (1%)

Query: 1   MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
           MGQKINPI FRLG+N TW+SRWFA  +EYG LLHEDLK+R+++   LKQAG++K++IER 
Sbjct: 1   MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60

Query: 61  HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
           HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61  HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDATLVAQSI 120

Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
           AQQLERRV FRRAMKRAVQSAMR GA+G+K+  +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
            IDYGTA AETA+G CGIKV++  + E+ + D    A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWI-FKGEILEHDPM--ASERRALEGDA 224