PSIBLAST alignment of GI: 254780255 and protein with PDB id: 1fjg

gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin Length = 239
>gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit Length = 239

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 140/215 (65%)

Query: 1   MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
           MG KI+PI FRLG+   W SRW+A   +Y  LL ED +IR  L+  L  AG+A++ IER 
Sbjct: 1   MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERA 60

Query: 61  HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
             N  + V+ A+PG++IG+ G  I  +R++L+ +T   + L+V EV  P ++A L+AQ +
Sbjct: 61  ADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRV 120

Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
           A+Q+ERR   RRA+K+AVQ  M  GA G KVI SGR+ GAE +RTE   +GRVPL TLRA
Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRA 180

Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
           +IDYG A+A T YG  G+K Y+ L + +       
Sbjct: 181 NIDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKA 215