PSIBLAST alignment of GI: 254780255 and protein with PDB id: 1vs5

gi|116666550|pdb|1VS5|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 233
>gi|116666602|pdb|1VS7|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 233
 Score =  269 bits (689), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%)

Query: 1   MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
           MGQK++P   RLG+   WNS WFA   E+   L  D K+R+YL   L +A V++I+IER 
Sbjct: 1   MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60

Query: 61  HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
            K+ R+ +++ARPG++IGKKG D+EK+RK ++++      +++ EV KPE++A L+A SI
Sbjct: 61  AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120

Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
             QLERRV+FRRAMKRAVQ+AMR GA G+KV  SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
            IDY T+ A T YG  G+KV++   + +           PAA+ +  ++ 
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230