BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780255|ref|YP_003064668.1| 30S ribosomal protein S3 [Candidatus Liberibacter asiaticus str. psy62] (227 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|86357311|ref|YP_469203.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42] gi|190891361|ref|YP_001977903.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652] gi|123765804|sp|Q2K9L0|RS3_RHIEC RecName: Full=30S ribosomal protein S3 gi|226697748|sp|B3PWS7|RS3_RHIE6 RecName: Full=30S ribosomal protein S3 gi|86281413|gb|ABC90476.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42] gi|190696640|gb|ACE90725.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652] gi|327191391|gb|EGE58417.1| ribosomal protein S3 [Rhizobium etli CNPAF512] Length = 244 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 189/227 (83%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 224 >gi|209548941|ref|YP_002280858.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226697749|sp|B5ZYU1|RS3_RHILW RecName: Full=30S ribosomal protein S3 gi|209534697|gb|ACI54632.1| ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 243 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 189/227 (83%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRAMEGDA 224 >gi|227821762|ref|YP_002825732.1| 30S ribosomal protein S3 [Sinorhizobium fredii NGR234] gi|254764541|sp|C3MAY6|RS3_RHISN RecName: Full=30S ribosomal protein S3 gi|227340761|gb|ACP24979.1| 30S ribosomal protein S3 [Sinorhizobium fredii NGR234] Length = 237 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKAAGIAKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+ Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224 >gi|150396213|ref|YP_001326680.1| 30S ribosomal protein S3 [Sinorhizobium medicae WSM419] gi|189045338|sp|A6U865|RS3_SINMW RecName: Full=30S ribosomal protein S3 gi|150027728|gb|ABR59845.1| ribosomal protein S3 [Sinorhizobium medicae WSM419] Length = 237 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKAAGIAKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+ Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224 >gi|15965115|ref|NP_385468.1| 30S ribosomal protein S3 [Sinorhizobium meliloti 1021] gi|307314365|ref|ZP_07593971.1| ribosomal protein S3 [Sinorhizobium meliloti BL225C] gi|307322077|ref|ZP_07601453.1| ribosomal protein S3 [Sinorhizobium meliloti AK83] gi|27734523|sp|Q92QG4|RS3_RHIME RecName: Full=30S ribosomal protein S3 gi|15074295|emb|CAC45941.1| Probable 30S ribosomal protein S3 [Sinorhizobium meliloti 1021] gi|306892259|gb|EFN23069.1| ribosomal protein S3 [Sinorhizobium meliloti AK83] gi|306899063|gb|EFN29705.1| ribosomal protein S3 [Sinorhizobium meliloti BL225C] Length = 237 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKSAGIAKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+ Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224 >gi|116251546|ref|YP_767384.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. viciae 3841] gi|241204171|ref|YP_002975267.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|123261672|sp|Q1MID5|RS3_RHIL3 RecName: Full=30S ribosomal protein S3 gi|115256194|emb|CAK07275.1| putative 30S ribosomal protein S3 [Rhizobium leguminosarum bv. viciae 3841] gi|240858061|gb|ACS55728.1| ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 243 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 188/227 (82%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIG+KG DI+K+RKKLS MTNSE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRAMEGDA 224 >gi|222085681|ref|YP_002544211.1| ribosomal protein S3 [Agrobacterium radiobacter K84] gi|254764507|sp|B9JDT4|RS3_AGRRK RecName: Full=30S ribosomal protein S3 gi|221723129|gb|ACM26285.1| ribosomal protein S3 [Agrobacterium radiobacter K84] Length = 241 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 152/227 (66%), Positives = 187/227 (82%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMDELKQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DI+K+RKKLS+MTNSE HL++ EV KPEI+A L+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIDKLRKKLSDMTNSETHLNIVEVRKPEIDAVLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 224 >gi|15889236|ref|NP_354917.1| 30S ribosomal protein S3 [Agrobacterium tumefaciens str. C58] gi|27734508|sp|Q8UE24|RS3_AGRT5 RecName: Full=30S ribosomal protein S3 gi|15157063|gb|AAK87702.1| 30S ribosomal protein S3 [Agrobacterium tumefaciens str. C58] Length = 243 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 157/227 (69%), Positives = 186/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRW+A +EYG LLHEDLKIR YL LKQAG+AK++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRGLEGDA 224 >gi|119383517|ref|YP_914573.1| 30S ribosomal protein S3 [Paracoccus denitrificans PD1222] gi|152060888|sp|A1B033|RS3_PARDP RecName: Full=30S ribosomal protein S3 gi|119373284|gb|ABL68877.1| SSU ribosomal protein S3P [Paracoccus denitrificans PD1222] Length = 240 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 134/225 (59%), Positives = 172/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRW+A +YG LL EDLKIR++++ KQAGV++++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADDKDYGNLLLEDLKIRDFIKKEAKQAGVSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG+IIGKKG DIE +RKKL+N T SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIETLRKKLANFTGSELHLNIVEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG G+KV++ + E+ + D P A R + Sbjct: 181 DIDYALSEASTPYGIIGVKVWIF-KGEIMEHD---PQARDRRATE 221 >gi|163760805|ref|ZP_02167884.1| 30S ribosomal protein S3 [Hoeflea phototrophica DFL-43] gi|162281849|gb|EDQ32141.1| 30S ribosomal protein S3 [Hoeflea phototrophica DFL-43] Length = 234 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 149/227 (65%), Positives = 184/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR+YL LKQAG++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGKLLHEDLKIRKYLLAELKQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPGLIIGKKG DIEK+R+KL MT SE HL++ EV KPE++ATL+AQSI Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRRKLGEMTQSETHLNIVEVRKPEVDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR+VQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV++ + E+ + D A+E R E D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWIF-KGEILEHDPM--ASERRATEGDA 224 >gi|254470501|ref|ZP_05083905.1| ribosomal protein S3 [Pseudovibrio sp. JE062] gi|211960812|gb|EEA96008.1| ribosomal protein S3 [Pseudovibrio sp. JE062] Length = 238 Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats. Identities = 143/226 (63%), Positives = 175/226 (77%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED +IREYL LKQA V+K++IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFASKNEYGDLLHEDFRIREYLLKELKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++S RPG++IGKKG DIE++RKKLS MTNSE+HL++ EV KPE +A L+A SI Sbjct: 61 HKKCRVTIHSGRPGVVIGKKGADIERLRKKLSAMTNSEVHLNIVEVRKPETDAALVAASI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGTA A TAYG+CG+KV++ + E+ + D P A R + Sbjct: 181 DIDYGTATAHTAYGACGVKVWIF-KGEILEHD---PMASERRATEG 222 >gi|325293330|ref|YP_004279194.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3] gi|325061183|gb|ADY64874.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3] Length = 243 Score = 288 bits (736), Expect = 5e-76, Method: Composition-based stats. Identities = 156/227 (68%), Positives = 186/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRW+A +EYG LLHEDLKIR YL LKQAG+AK++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRGLEGDA 224 >gi|319783326|ref|YP_004142802.1| ribosomal protein S3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169214|gb|ADV12752.1| ribosomal protein S3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 241 Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats. Identities = 146/227 (64%), Positives = 181/227 (79%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYGTA A TAYG CG+KV+V + E+ + D A+E R E D+ Sbjct: 181 DVDYGTAEAHTAYGICGVKVWVF-KGEILEHDPM--ASERRASESDA 224 >gi|298291444|ref|YP_003693383.1| ribosomal protein S3 [Starkeya novella DSM 506] gi|296927955|gb|ADH88764.1| ribosomal protein S3 [Starkeya novella DSM 506] Length = 235 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 138/226 (61%), Positives = 178/226 (78%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA V+KI+IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFAGKGEYGQLLHEDIKIREMLLKLLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++ MTNSE+ +++ E+ KPEI+A L+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVAEMTNSEVFINIVEIRKPEIDARLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A T YG+CG+KV++ + E+ + D A + R E + Sbjct: 181 DVDYGTATAFTTYGTCGVKVWIF-KGEILEHDPM--AQDKRQAEGE 223 >gi|154245629|ref|YP_001416587.1| ribosomal protein S3 [Xanthobacter autotrophicus Py2] gi|226697776|sp|A7IFY7|RS3_XANP2 RecName: Full=30S ribosomal protein S3 gi|154159714|gb|ABS66930.1| ribosomal protein S3 [Xanthobacter autotrophicus Py2] Length = 252 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 138/227 (60%), Positives = 179/227 (78%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA V+K++IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFANKGEYGKLLHEDIKIREMLFKQLKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +YS RPG++IGKKG DI+K+RKK+S MT+SE+ +++ E+ KPEI+A L+A+SI Sbjct: 61 HKKCRVTIYSGRPGVVIGKKGADIDKLRKKVSEMTSSEVFINIVEIRKPEIDARLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYGTA A T YG+CG+KV+V + E+ + D A + R E+++ Sbjct: 181 DVDYGTATAFTTYGTCGVKVWVF-KGEILEHDPM--AQDKRQAEQEA 224 >gi|304321446|ref|YP_003855089.1| 30S ribosomal protein S3 [Parvularcula bermudensis HTCC2503] gi|303300348|gb|ADM09947.1| 30S ribosomal protein S3 [Parvularcula bermudensis HTCC2503] Length = 241 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 176/227 (77%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+N TW+SRWFA YG LLHEDL+IR +LQ LK AGV++I+IER Sbjct: 1 MGQKVSPIGLRLGINRTWDSRWFASKGNYGDLLHEDLRIRNFLQKRLKNAGVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG++IGKKG DIEK+R++L M++SE L++ E+ KPE++ATL+A++I Sbjct: 61 HKKCRVTIYTARPGVVIGKKGADIEKLRQELQKMSSSETVLNIVEIRKPEVDATLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR FRRAMKRA+Q+AMR GA G++V SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRASFRRAMKRAMQTAMRMGALGIRVNCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T YG+ GIKV++ + E+ D D A+E R+VE + Sbjct: 181 DIDYGIATARTTYGAIGIKVWIF-KGEILDHDPM--ASERRLVESQT 224 >gi|144900890|emb|CAM77754.1| 30S ribosomal protein S3 [Magnetospirillum gryphiswaldense MSR-1] Length = 228 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 134/227 (59%), Positives = 173/227 (76%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA G +Y +LHEDLK+R+YL+ L QAGV++++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFADG-DYAKMLHEDLKLRDYLRKKLAQAGVSRVIIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +++ARPG++IGKKG DIE +RK LS MT E+HL++ E+ KPE++A L+A+SI Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKTLSKMTGGEVHLNIVEIRKPELDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVSFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A+T YG+CGIKV+V + E+ D P A+ + +S Sbjct: 180 DIDYGIGTAKTTYGTCGIKVWVF-KGEILAHD---PMAQDKRAAGES 222 >gi|254780255|ref|YP_003064668.1| 30S ribosomal protein S3 [Candidatus Liberibacter asiaticus str. psy62] gi|254039932|gb|ACT56728.1| 30S ribosomal protein S3 [Candidatus Liberibacter asiaticus str. psy62] Length = 227 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT Sbjct: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI Sbjct: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS Sbjct: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 >gi|39936307|ref|NP_948583.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris CGA009] gi|316933533|ref|YP_004108515.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris DX-1] gi|61215590|sp|Q6N4U0|RS3_RHOPA RecName: Full=30S ribosomal protein S3; AltName: Full=RRP-S3 gi|39650162|emb|CAE28685.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris CGA009] gi|315601247|gb|ADU43782.1| ribosomal protein S3 [Rhodopseudomonas palustris DX-1] Length = 235 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAEG 222 >gi|192292031|ref|YP_001992636.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris TIE-1] gi|226697751|sp|B3QBX4|RS3_RHOPT RecName: Full=30S ribosomal protein S3 gi|192285780|gb|ACF02161.1| ribosomal protein S3 [Rhodopseudomonas palustris TIE-1] Length = 235 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAES 222 >gi|23502104|ref|NP_698231.1| 30S ribosomal protein S3 [Brucella suis 1330] gi|62290138|ref|YP_221931.1| 30S ribosomal protein S3 [Brucella abortus bv. 1 str. 9-941] gi|82700061|ref|YP_414635.1| 30S ribosomal protein S3 [Brucella melitensis biovar Abortus 2308] gi|148559744|ref|YP_001259147.1| 30S ribosomal protein S3 [Brucella ovis ATCC 25840] gi|189024376|ref|YP_001935144.1| Ribosomal protein S3 [Brucella abortus S19] gi|225627697|ref|ZP_03785734.1| ribosomal protein S3 [Brucella ceti str. Cudo] gi|237815646|ref|ZP_04594643.1| ribosomal protein S3 [Brucella abortus str. 2308 A] gi|254689447|ref|ZP_05152701.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870] gi|254693932|ref|ZP_05155760.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya] gi|254697582|ref|ZP_05159410.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59] gi|254701968|ref|ZP_05163796.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513] gi|254710298|ref|ZP_05172109.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94] gi|254714295|ref|ZP_05176106.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1] gi|254717732|ref|ZP_05179543.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1] gi|254719285|ref|ZP_05181096.1| 30S ribosomal protein S3 [Brucella sp. 83/13] gi|254730476|ref|ZP_05189054.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292] gi|256031792|ref|ZP_05445406.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1] gi|256061307|ref|ZP_05451457.1| 30S ribosomal protein S3 [Brucella neotomae 5K33] gi|256159962|ref|ZP_05457680.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1] gi|256255193|ref|ZP_05460729.1| 30S ribosomal protein S3 [Brucella ceti B1/94] gi|256257693|ref|ZP_05463229.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68] gi|256369651|ref|YP_003107161.1| 30S ribosomal protein S3 [Brucella microti CCM 4915] gi|260168926|ref|ZP_05755737.1| 30S ribosomal protein S3 [Brucella sp. F5/99] gi|260546686|ref|ZP_05822425.1| ribosomal protein S3 [Brucella abortus NCTC 8038] gi|260754970|ref|ZP_05867318.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870] gi|260758186|ref|ZP_05870534.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292] gi|260762012|ref|ZP_05874355.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59] gi|260883979|ref|ZP_05895593.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68] gi|261214224|ref|ZP_05928505.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya] gi|261219575|ref|ZP_05933856.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1] gi|261222389|ref|ZP_05936670.1| 30S ribosomal protein S3 [Brucella ceti B1/94] gi|261317861|ref|ZP_05957058.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94] gi|261322070|ref|ZP_05961267.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1] gi|261325314|ref|ZP_05964511.1| 30S ribosomal protein S3 [Brucella neotomae 5K33] gi|261752536|ref|ZP_05996245.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513] gi|261758419|ref|ZP_06002128.1| ribosomal protein S3 [Brucella sp. F5/99] gi|265984285|ref|ZP_06097020.1| 30S ribosomal protein S3 [Brucella sp. 83/13] gi|265988890|ref|ZP_06101447.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1] gi|265998354|ref|ZP_06110911.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1] gi|297248533|ref|ZP_06932251.1| 30S ribosomal protein S3 [Brucella abortus bv. 5 str. B3196] gi|306838037|ref|ZP_07470895.1| ribosomal protein S3 [Brucella sp. NF 2653] gi|306840307|ref|ZP_07473079.1| ribosomal protein S3 [Brucella sp. BO2] gi|306844131|ref|ZP_07476725.1| ribosomal protein S3 [Brucella sp. BO1] gi|27734491|sp|P59180|RS3_BRUSU RecName: Full=30S ribosomal protein S3 gi|75505262|sp|Q57CR4|RS3_BRUAB RecName: Full=30S ribosomal protein S3 gi|91207642|sp|Q2YRA1|RS3_BRUA2 RecName: Full=30S ribosomal protein S3 gi|189044955|sp|A5VR00|RS3_BRUO2 RecName: Full=30S ribosomal protein S3 gi|226697671|sp|B2S673|RS3_BRUA1 RecName: Full=30S ribosomal protein S3 gi|23348064|gb|AAN30146.1| ribosomal protein S3 [Brucella suis 1330] gi|62196270|gb|AAX74570.1| RpsC, ribosomal protein S3 [Brucella abortus bv. 1 str. 9-941] gi|82616162|emb|CAJ11205.1| Ribosomal protein S3:Type 2 KH domain:KH domain:Bacterial ribosomal protein S3 [Brucella melitensis biovar Abortus 2308] gi|148371001|gb|ABQ60980.1| ribosomal protein S3 [Brucella ovis ATCC 25840] gi|189019948|gb|ACD72670.1| Ribosomal protein S3 [Brucella abortus S19] gi|225617702|gb|EEH14747.1| ribosomal protein S3 [Brucella ceti str. Cudo] gi|237788944|gb|EEP63155.1| ribosomal protein S3 [Brucella abortus str. 2308 A] gi|255999813|gb|ACU48212.1| 30S ribosomal protein S3 [Brucella microti CCM 4915] gi|260095736|gb|EEW79613.1| ribosomal protein S3 [Brucella abortus NCTC 8038] gi|260668504|gb|EEX55444.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292] gi|260672444|gb|EEX59265.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59] gi|260675078|gb|EEX61899.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870] gi|260873507|gb|EEX80576.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68] gi|260915831|gb|EEX82692.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya] gi|260920973|gb|EEX87626.1| 30S ribosomal protein S3 [Brucella ceti B1/94] gi|260924664|gb|EEX91232.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1] gi|261294760|gb|EEX98256.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1] gi|261297084|gb|EEY00581.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94] gi|261301294|gb|EEY04791.1| 30S ribosomal protein S3 [Brucella neotomae 5K33] gi|261738403|gb|EEY26399.1| ribosomal protein S3 [Brucella sp. F5/99] gi|261742289|gb|EEY30215.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513] gi|262552822|gb|EEZ08812.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1] gi|264661087|gb|EEZ31348.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1] gi|264662877|gb|EEZ33138.1| 30S ribosomal protein S3 [Brucella sp. 83/13] gi|297175702|gb|EFH35049.1| 30S ribosomal protein S3 [Brucella abortus bv. 5 str. B3196] gi|306275574|gb|EFM57306.1| ribosomal protein S3 [Brucella sp. BO1] gi|306289706|gb|EFM60895.1| ribosomal protein S3 [Brucella sp. BO2] gi|306406961|gb|EFM63182.1| ribosomal protein S3 [Brucella sp. NF 2653] Length = 236 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 150/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|158424172|ref|YP_001525464.1| ribosomal protein S3 [Azorhizobium caulinodans ORS 571] gi|189044949|sp|A8IAR2|RS3_AZOC5 RecName: Full=30S ribosomal protein S3 gi|158331061|dbj|BAF88546.1| ribosomal protein S3 [Azorhizobium caulinodans ORS 571] Length = 248 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 134/226 (59%), Positives = 178/226 (78%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA +YG LLHED+KIR+ L LKQA V+K++IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFANKGDYGTLLHEDIKIRQMLLKQLKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +YSARPG++IGKKG DI+K+RKK+++MT SE+ +++ E+ KPEI+A L+A+SI Sbjct: 61 HKKCRVTIYSARPGVVIGKKGADIDKLRKKVADMTKSEVFINIVEIRKPEIDARLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A T YG+CG+KV++ + E+ + D A + R+ + Sbjct: 181 DVDYGTATAFTTYGTCGVKVWIF-KGEILEHDPM--AVDKRMTAES 223 >gi|17987046|ref|NP_539680.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M] gi|225852724|ref|YP_002732957.1| 30S ribosomal protein S3 [Brucella melitensis ATCC 23457] gi|256044877|ref|ZP_05447781.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1] gi|256113781|ref|ZP_05454585.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether] gi|256263786|ref|ZP_05466318.1| 30S ribosomal protein S3 [Brucella melitensis bv. 2 str. 63/9] gi|260565521|ref|ZP_05836005.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M] gi|265991304|ref|ZP_06103861.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995141|ref|ZP_06107698.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether] gi|27734517|sp|Q8YHN4|RS3_BRUME RecName: Full=30S ribosomal protein S3 gi|254764516|sp|C0RJJ5|RS3_BRUMB RecName: Full=30S ribosomal protein S3 gi|17982702|gb|AAL51944.1| ssu ribosomal protein s3p [Brucella melitensis bv. 1 str. 16M] gi|225641089|gb|ACO01003.1| ribosomal protein S3 [Brucella melitensis ATCC 23457] gi|260151589|gb|EEW86683.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M] gi|262766254|gb|EEZ12043.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether] gi|263002088|gb|EEZ14663.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1] gi|263093914|gb|EEZ17848.1| 30S ribosomal protein S3 [Brucella melitensis bv. 2 str. 63/9] gi|326409249|gb|ADZ66314.1| 30S ribosomal protein S3 [Brucella melitensis M28] gi|326538957|gb|ADZ87172.1| ribosomal protein S3 [Brucella melitensis M5-90] Length = 236 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|110634024|ref|YP_674232.1| 30S ribosomal protein S3 [Mesorhizobium sp. BNC1] gi|123162296|sp|Q11HQ8|RS3_MESSB RecName: Full=30S ribosomal protein S3 gi|110285008|gb|ABG63067.1| SSU ribosomal protein S3P [Chelativorans sp. BNC1] Length = 235 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 147/224 (65%), Positives = 182/224 (81%), Gaps = 3/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA +EYG LLHEDLKIR Y++ LKQA ++K++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTNEYGQLLHEDLKIRTYIENELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+R+K++ MTN+E HL++ EV KPEI+A LIAQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRRKITQMTNAETHLNIVEVRKPEIDARLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCTGRLGGAEIARIEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE Sbjct: 181 DIDYGTAEAKTAYGVCGVKVWVF-KGEILEHDPM--ASERRAVE 221 >gi|153009292|ref|YP_001370507.1| 30S ribosomal protein S3 [Ochrobactrum anthropi ATCC 49188] gi|239832116|ref|ZP_04680445.1| ribosomal protein S3 [Ochrobactrum intermedium LMG 3301] gi|189045024|sp|A6X0C4|RS3_OCHA4 RecName: Full=30S ribosomal protein S3 gi|151561180|gb|ABS14678.1| ribosomal protein S3 [Ochrobactrum anthropi ATCC 49188] gi|239824383|gb|EEQ95951.1| ribosomal protein S3 [Ochrobactrum intermedium LMG 3301] Length = 236 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPEI+ATLIAQSI Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEIDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|146340063|ref|YP_001205111.1| 30S ribosomal protein S3 [Bradyrhizobium sp. ORS278] gi|152060849|sp|A4YSJ8|RS3_BRASO RecName: Full=30S ribosomal protein S3 gi|146192869|emb|CAL76874.1| 30S ribosomal subunit protein S3 [Bradyrhizobium sp. ORS278] Length = 236 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 134/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKAEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMNEG 222 >gi|258542033|ref|YP_003187466.1| 30S ribosomal protein S3 [Acetobacter pasteurianus IFO 3283-01] gi|329114212|ref|ZP_08242974.1| 30S ribosomal protein S3 [Acetobacter pomorum DM001] gi|256633111|dbj|BAH99086.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-01] gi|256636168|dbj|BAI02137.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-03] gi|256639223|dbj|BAI05185.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-07] gi|256642277|dbj|BAI08232.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-22] gi|256645332|dbj|BAI11280.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-26] gi|256648387|dbj|BAI14328.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-32] gi|256651440|dbj|BAI17374.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654431|dbj|BAI20358.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-12] gi|326696288|gb|EGE47967.1| 30S ribosomal protein S3 [Acetobacter pomorum DM001] Length = 225 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A +Y LLHEDLK+R +L+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYADS-DYSKLLHEDLKLRAFLRRKLVGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DI+ +RK+L+ M +E+ L++ E+ KPEI+ATL+A++I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDALRKELTRMAGTEVALNIVEIRKPEIDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEILAHD---PMAQDRRAAEQA 222 >gi|84685423|ref|ZP_01013321.1| 30S ribosomal protein S3 [Maritimibacter alkaliphilus HTCC2654] gi|84666580|gb|EAQ13052.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2654] Length = 235 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 133/225 (59%), Positives = 175/225 (77%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRW+A +EYG LL EDLKIRE+++ KQAGV++++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTNEYGDLLLEDLKIREFIKEECKQAGVSRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRA Q++MR GA G++V +GRL GAE++RTE EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAAQNSMRMGALGIRVNCAGRLGGAEIARTEWLREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A+T YG GIKV++ + E+ + D P+A R ++ Sbjct: 181 DIDYALAEAKTPYGIIGIKVWIF-KGEIMEHD---PSARDRKQQE 221 >gi|294852564|ref|ZP_06793237.1| 30S ribosomal protein S3 [Brucella sp. NVSL 07-0026] gi|294821153|gb|EFG38152.1| 30S ribosomal protein S3 [Brucella sp. NVSL 07-0026] Length = 236 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 151/227 (66%), Positives = 184/227 (81%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + DS A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDSM--ASERRAVEGDN 224 >gi|148256386|ref|YP_001240971.1| 30S ribosomal protein S3 [Bradyrhizobium sp. BTAi1] gi|189044953|sp|A5ELM1|RS3_BRASB RecName: Full=30S ribosomal protein S3 gi|146408559|gb|ABQ37065.1| SSU ribosomal protein S3P [Bradyrhizobium sp. BTAi1] Length = 236 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 134/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKAEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMNEG 222 >gi|254706592|ref|ZP_05168420.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10] gi|261314051|ref|ZP_05953248.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10] gi|261303077|gb|EEY06574.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10] Length = 236 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 149/227 (65%), Positives = 182/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL G E++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGTEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|56695401|ref|YP_165749.1| 30S ribosomal protein S3 [Ruegeria pomeroyi DSS-3] gi|62287190|sp|Q5LW56|RS3_SILPO RecName: Full=30S ribosomal protein S3 gi|56677138|gb|AAV93804.1| ribosomal protein S3 [Ruegeria pomeroyi DSS-3] Length = 235 Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 134/225 (59%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL IRE+++ KQAGVA+++IER Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAIREFIKEECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+NMT+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLANMTDSELHLNIVEVRKPEMDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ++MR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNSMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYALAEASTPYGIIGIKVWIF-KGEILEHD---PQARDRKAQE 221 >gi|23014082|ref|ZP_00053919.1| COG0092: Ribosomal protein S3 [Magnetospirillum magnetotacticum MS-1] Length = 227 Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 130/227 (57%), Positives = 171/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+N TW+SRWFA Y LLH+DLK+R+YL+ L QAGV++++IER Sbjct: 1 MGQKVNPIGLRVGINRTWDSRWFAD-ENYAKLLHQDLKLRKYLRDKLAQAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +++ARPG++IGKKG DIE +RK+LS MT E+HL++ E+ KPE++A L+A+SI Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGGEVHLNIVEIRKPELDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A T YGSCG+KV+V + E+ D P A+ + ++ Sbjct: 180 DVDYGVGTAHTTYGSCGVKVWVF-KGEILAHD---PMAQDKRAAGET 222 >gi|86749421|ref|YP_485917.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris HaA2] gi|123408226|sp|Q2IXQ4|RS3_RHOP2 RecName: Full=30S ribosomal protein S3 gi|86572449|gb|ABD07006.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris HaA2] Length = 232 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 137/227 (60%), Positives = 181/227 (79%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+ Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224 >gi|163843493|ref|YP_001627897.1| 30S ribosomal protein S3 [Brucella suis ATCC 23445] gi|189044956|sp|B0CH26|RS3_BRUSI RecName: Full=30S ribosomal protein S3 gi|163674216|gb|ABY38327.1| ribosomal protein S3 [Brucella suis ATCC 23445] Length = 236 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 149/227 (65%), Positives = 183/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQ+I Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQTI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|114704490|ref|ZP_01437398.1| 30S ribosomal protein S3 [Fulvimarina pelagi HTCC2506] gi|114539275|gb|EAU42395.1| 30S ribosomal protein S3 [Fulvimarina pelagi HTCC2506] Length = 235 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 148/223 (66%), Positives = 180/223 (80%), Gaps = 3/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+N TW+SRWFA G EYG+LLHEDLKIR +L LKQA V+KI+IER Sbjct: 1 MGQKINPTGFRLGINRTWDSRWFADGREYGSLLHEDLKIRNFLLDELKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPG++IGKKG DIEK+RKKLS MT++E H+++ EV KPE +A L+AQSI Sbjct: 61 HKKCRISIHSARPGIVIGKKGADIEKLRKKLSTMTDAETHINIVEVRKPETDAALVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 +DYGTA AETAYG CG+KV++ + E+ + D A+E R V Sbjct: 181 DVDYGTAEAETAYGICGVKVWIF-KGEILEHDPM--ASERRQV 220 >gi|161619183|ref|YP_001593070.1| 30S ribosomal protein S3 [Brucella canis ATCC 23365] gi|254704512|ref|ZP_05166340.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686] gi|260566244|ref|ZP_05836714.1| ribosomal protein S3 [Brucella suis bv. 4 str. 40] gi|261755195|ref|ZP_05998904.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686] gi|189044954|sp|A9M5P4|RS3_BRUC2 RecName: Full=30S ribosomal protein S3 gi|161335994|gb|ABX62299.1| ribosomal protein S3 [Brucella canis ATCC 23365] gi|260155762|gb|EEW90842.1| ribosomal protein S3 [Brucella suis bv. 4 str. 40] gi|261744948|gb|EEY32874.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686] Length = 236 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 149/227 (65%), Positives = 182/227 (80%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQ I Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQLI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+ Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224 >gi|85715125|ref|ZP_01046109.1| 30S ribosomal protein S3 [Nitrobacter sp. Nb-311A] gi|85698040|gb|EAQ35913.1| 30S ribosomal protein S3 [Nitrobacter sp. Nb-311A] Length = 231 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A SEYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKSEYGRLLHEDVKIRELLHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ L++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVLNIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYG A A T +G+CG+KV++ + E+ + D P A+ + + D Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRLAGD 222 >gi|90424931|ref|YP_533301.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisB18] gi|123275055|sp|Q211F4|RS3_RHOPB RecName: Full=30S ribosomal protein S3 gi|90106945|gb|ABD88982.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisB18] Length = 232 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 136/227 (59%), Positives = 181/227 (79%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+ Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224 >gi|27380505|ref|NP_772034.1| 30S ribosomal protein S3 [Bradyrhizobium japonicum USDA 110] gi|34098364|sp|Q89J90|RS3_BRAJA RecName: Full=30S ribosomal protein S3 gi|27353669|dbj|BAC50659.1| 30S ribosomal protein S3 [Bradyrhizobium japonicum USDA 110] Length = 241 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 134/226 (59%), Positives = 180/226 (79%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKQEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAEG 222 >gi|13470557|ref|NP_102126.1| 30S ribosomal protein S3 [Mesorhizobium loti MAFF303099] gi|27734527|sp|Q98N51|RS3_RHILO RecName: Full=30S ribosomal protein S3 gi|14021299|dbj|BAB47912.1| 30S ribosomal protein S3 [Mesorhizobium loti MAFF303099] Length = 241 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 146/224 (65%), Positives = 179/224 (79%), Gaps = 3/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A TAYG CG+KV+V + E+ + D A+E R E Sbjct: 181 DVDYGTAEANTAYGICGVKVWVF-KGEILEHDPM--ASERRATE 221 >gi|328543364|ref|YP_004303473.1| 30S ribosomal protein S3 [Polymorphum gilvum SL003B-26A1] gi|326413109|gb|ADZ70172.1| 30S ribosomal protein S3 [Polymorphum gilvum SL003B-26A1] Length = 242 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 138/227 (60%), Positives = 173/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A EYG LLHED +IREYL LKQA V+KI+IER Sbjct: 1 MGHKVNPIGMRLGINRTWDSRWYANKGEYGTLLHEDFRIREYLMNELKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++S RPG++IGKKG DIE++RKKL +T+SE+H+++ EV KPEI+A L+A SI Sbjct: 61 HKKCRVTIHSGRPGVVIGKKGADIERLRKKLGQITSSEVHINIVEVRKPEIDANLVAASI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A TAYG+CG+KV++ + E+ + D P A R + S Sbjct: 181 DIDYGIATAHTAYGACGVKVWIF-KGEILEHD---PMASERRASEGS 223 >gi|254785085|ref|YP_003072513.1| 30S ribosomal protein S3 [Teredinibacter turnerae T7901] gi|237684180|gb|ACR11444.1| ribosomal protein S3 [Teredinibacter turnerae T7901] Length = 224 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 109/224 (48%), Positives = 155/224 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A +Y L+EDLK+R Y+Q L A V+++ IER Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYASKGDYADKLNEDLKVRAYIQKVLSHASVSRVDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IGKKG D+EK+R ++S +H+++ E+ KP+++ L+AQS+ Sbjct: 61 ANTARVTIHTARPGIVIGKKGEDVEKLRAEISKQMGVPVHINIEEIRKPDLDGVLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA+GVK+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRQGAEGVKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + + + A + + + Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEIIGGLEEAESAPKKKGAK 224 >gi|237653990|ref|YP_002890304.1| 30S ribosomal protein S3 [Thauera sp. MZ1T] gi|237625237|gb|ACR01927.1| ribosomal protein S3 [Thauera sp. MZ1T] Length = 256 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 122/230 (53%), Positives = 169/230 (73%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRWFA +Y +LHEDLK+R+YL+ L A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRDWGSRWFANSKDYAGMLHEDLKVRDYLKKRLAHASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ +YSARPG++IGKKG DIE +++ L + +H+++ EV KPE++A LIA SI Sbjct: 61 AKNARVTLYSARPGVVIGKKGEDIEALKRDLQKIVGVPVHVNIEEVRKPELDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI---PAAEHRVVEKDS 227 +IDYG + A+T YG GIKV+V + + ++ + P A++R + + Sbjct: 181 NIDYGVSEAKTTYGVIGIKVWVFKGEMLGRNEQPVAAEPEADNRRGRRGA 230 >gi|90417759|ref|ZP_01225671.1| ribosomal protein S3 [Aurantimonas manganoxydans SI85-9A1] gi|90337431|gb|EAS51082.1| ribosomal protein S3 [Aurantimonas manganoxydans SI85-9A1] Length = 235 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 148/223 (66%), Positives = 179/223 (80%), Gaps = 3/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+N TW+SRW+A EYG LLHEDLKIR YL LKQA V+KI+IER Sbjct: 1 MGQKINPTGFRLGINRTWDSRWYANTGEYGHLLHEDLKIRAYLLNELKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPG++IGKKG DIEK+RKKL+ MTN+E H+++ EV KPE +ATL+AQSI Sbjct: 61 HKKCRITIHSARPGIVIGKKGADIEKLRKKLAAMTNAETHINIVEVRKPETDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDYGTA A+TAYG CG+KV++ + E+ + D A+E R V Sbjct: 181 DIDYGTAEAKTAYGICGVKVWIF-KGEILEHDPM--ASERRQV 220 >gi|323136092|ref|ZP_08071175.1| ribosomal protein S3 [Methylocystis sp. ATCC 49242] gi|322399183|gb|EFY01702.1| ribosomal protein S3 [Methylocystis sp. ATCC 49242] Length = 251 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 171/227 (75%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGVN TW+SRWFA EY LLHED+ IRE + LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFASKGEYAKLLHEDMAIREAVMKLLKQAAVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+KIRK + +T SE+ +++ EV KPE A L+A SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVGKLTGSEVVINIVEVRKPETEAALVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYGTA A TAYG+CGIKV++ + E+ + D P A+ + + + Sbjct: 181 DVDYGTATAHTAYGACGIKVWIF-KGEILEHD---PMAQDKRAAEQA 223 >gi|91977646|ref|YP_570305.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisB5] gi|115525579|ref|YP_782490.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisA53] gi|122295414|sp|Q07KM4|RS3_RHOP5 RecName: Full=30S ribosomal protein S3 gi|123735289|sp|Q134T5|RS3_RHOPS RecName: Full=30S ribosomal protein S3 gi|91684102|gb|ABE40404.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisB5] gi|115519526|gb|ABJ07510.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisA53] Length = 232 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 136/227 (59%), Positives = 180/227 (79%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIR L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIRAILHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+ Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224 >gi|75675562|ref|YP_317983.1| 30S ribosomal protein S3 [Nitrobacter winogradskyi Nb-255] gi|91207824|sp|Q3SSW0|RS3_NITWN RecName: Full=30S ribosomal protein S3 gi|74420432|gb|ABA04631.1| SSU ribosomal protein S3P [Nitrobacter winogradskyi Nb-255] Length = 231 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 180/227 (79%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A +EYG LLHED+KIRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKAEYGRLLHEDVKIRELLHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ L++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVLNIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A A T +G+CG+KV++ + E+ + D A + R DS Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRQAGDDS 224 >gi|329889135|ref|ZP_08267478.1| ribosomal protein S3 [Brevundimonas diminuta ATCC 11568] gi|328844436|gb|EGF94000.1| ribosomal protein S3 [Brevundimonas diminuta ATCC 11568] Length = 248 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 133/227 (58%), Positives = 173/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRWFA G++Y LLH+DLK+R +L+ L AGV++I+IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWFAGGADYAKLLHQDLKLRTWLKERLSAAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I Sbjct: 61 HKKCRVTIYAARPGVVIGKKGADIEKLRKDISARTEGEVHLNIVEVRKPETDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A+T YG G+KV+V + EV + D P A+ + +++ Sbjct: 181 DIDYGFYEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWAQEA 223 >gi|260468548|ref|ZP_05813715.1| ribosomal protein S3 [Mesorhizobium opportunistum WSM2075] gi|259028704|gb|EEW30013.1| ribosomal protein S3 [Mesorhizobium opportunistum WSM2075] Length = 241 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 145/224 (64%), Positives = 179/224 (79%), Gaps = 3/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A TAYG CG+KV+V + E+ + D A+E R E Sbjct: 181 DVDYGTAEANTAYGICGVKVWVF-KGEILEHDPM--ASERRATE 221 >gi|118591178|ref|ZP_01548577.1| 30S ribosomal protein S3 [Stappia aggregata IAM 12614] gi|118436254|gb|EAV42896.1| 30S ribosomal protein S3 [Stappia aggregata IAM 12614] Length = 242 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 172/227 (75%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RLG+N TW+SRW+A +EYG LLHED +IRE L LKQA V+K++IER Sbjct: 1 MGHKTNPIGMRLGINRTWDSRWYANKNEYGDLLHEDFRIRELLLKELKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++S RPG++IGKKG DIE++RKK++++TNSE+HL++ EV KPEI+ATL+AQSI Sbjct: 61 HKKCRVSIHSGRPGVVIGKKGADIERLRKKIADITNSEVHLNIVEVRKPEIDATLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A TAYG CG+KV++ + E+ + D + + Sbjct: 181 DIDYGVASAHTAYGVCGVKVWIF-KGEILEHDPMASERRATAASEGN 226 >gi|182678343|ref|YP_001832489.1| ribosomal protein S3 [Beijerinckia indica subsp. indica ATCC 9039] gi|226697664|sp|B2IK68|RS3_BEII9 RecName: Full=30S ribosomal protein S3 gi|182634226|gb|ACB95000.1| ribosomal protein S3 [Beijerinckia indica subsp. indica ATCC 9039] Length = 241 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 138/225 (61%), Positives = 178/225 (79%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA EY LLHED++IRE L +LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANKGEYSKLLHEDMRIREVLMKNLKQAAVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+KIRK +S +T+SE+ +++ EV KPEI+ATL+A SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVSKLTDSEVVINIVEVRKPEIDATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSA+R GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +DYG A A TAYG+CGIKV++ + E+ + D P A+ R + + Sbjct: 181 DVDYGVATAHTAYGTCGIKVWIF-KGEILEHD---PMAQDRKMAE 221 >gi|83312223|ref|YP_422487.1| 30S ribosomal protein S3 [Magnetospirillum magneticum AMB-1] gi|123726906|sp|Q2W2J7|RS3_MAGMM RecName: Full=30S ribosomal protein S3 gi|82947064|dbj|BAE51928.1| Ribosomal protein S3 [Magnetospirillum magneticum AMB-1] Length = 227 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 131/227 (57%), Positives = 172/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+N TW+SRWFA Y LLH+DLK+R+YL+ L QAGV++++IER Sbjct: 1 MGQKVNPIGLRVGINRTWDSRWFAD-ETYAKLLHQDLKLRKYLREKLAQAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +++ARPG++IGKKG DIE +RK+LS MT SE+HL++ E+ KPE++A L+A+SI Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGSEVHLNIVEIRKPELDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A T YGSCG+KV+V + E+ D P A+ + ++ Sbjct: 180 DVDYGVGTAHTTYGSCGVKVWVF-KGEILAHD---PMAQDKRAAGET 222 >gi|197104702|ref|YP_002130079.1| 30S ribosomal protein S3 [Phenylobacterium zucineum HLK1] gi|226697742|sp|B4R8M3|RS3_PHEZH RecName: Full=30S ribosomal protein S3 gi|196478122|gb|ACG77650.1| 30S ribosomal protein S3 [Phenylobacterium zucineum HLK1] Length = 253 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 136/227 (59%), Positives = 174/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ RLG+N TW+SRWFA G EYG LLHED+K+R L+ L QAGV++I+IER Sbjct: 1 MGQKINPVGLRLGINRTWDSRWFADGPEYGRLLHEDIKVRRALKKRLYQAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +Y+ARPG+IIGKKG DIEK+RK ++ MT+ E+HL++ E+ KPE +A LIA++I Sbjct: 61 HKKCRITIYAARPGVIIGKKGADIEKLRKDVAAMTDGEVHLNIVEIRKPETDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A+T YG G+KV+V + EV + D P A + + +S Sbjct: 181 DVDYGFTEAKTTYGVIGVKVWVF-KGEVLEHD---PMALDKRLAGES 223 >gi|254512172|ref|ZP_05124239.1| ribosomal protein S3 [Rhodobacteraceae bacterium KLH11] gi|221535883|gb|EEE38871.1| ribosomal protein S3 [Rhodobacteraceae bacterium KLH11] Length = 236 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 134/225 (59%), Positives = 172/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE++ KQAGVA+++IER Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFINKECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLARMTDSELHLNIVEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHAEAMTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221 >gi|260432436|ref|ZP_05786407.1| ribosomal protein S3 [Silicibacter lacuscaerulensis ITI-1157] gi|260416264|gb|EEX09523.1| ribosomal protein S3 [Silicibacter lacuscaerulensis ITI-1157] Length = 236 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 134/225 (59%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE+++ KQAGVA+++IER Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFIKKECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAAMTDSELHLNIVEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHAEAMTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221 >gi|296447536|ref|ZP_06889458.1| ribosomal protein S3 [Methylosinus trichosporium OB3b] gi|296254924|gb|EFH02029.1| ribosomal protein S3 [Methylosinus trichosporium OB3b] Length = 247 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 173/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGVN TW+SRWFA EY LLHEDL IR + HLKQA V++I+IER Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFASKGEYAKLLHEDLAIRAAVAKHLKQAAVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+KIRK + +T SE+ +++ EV KPE+ ATL+A SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVGRLTGSEVVINIVEVRKPEVEATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A A TAYG+CGIKV++ + E+ + D P A+ + + + + Sbjct: 181 DVDYGVATAHTAYGACGIKVWIF-KGEILEHD---PMAQDKRLAEAA 223 >gi|92117104|ref|YP_576833.1| 30S ribosomal protein S3 [Nitrobacter hamburgensis X14] gi|122990230|sp|Q1QN24|RS3_NITHX RecName: Full=30S ribosomal protein S3 gi|91799998|gb|ABE62373.1| SSU ribosomal protein S3P [Nitrobacter hamburgensis X14] Length = 231 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 132/226 (58%), Positives = 181/226 (80%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A +EYG LLHED++IRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKNEYGRLLHEDVRIRELLHKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYG A A T +G+CG+KV++ + E+ + D P A+ + + D Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRLAGD 222 >gi|15599453|ref|NP_252947.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1] gi|107103770|ref|ZP_01367688.1| hypothetical protein PaerPA_01004841 [Pseudomonas aeruginosa PACS2] gi|116052292|ref|YP_788862.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14] gi|152987607|ref|YP_001346229.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA7] gi|218889415|ref|YP_002438279.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58] gi|296387186|ref|ZP_06876685.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAb1] gi|313111411|ref|ZP_07797216.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016] gi|27734535|sp|Q9HWE1|RS3_PSEAE RecName: Full=30S ribosomal protein S3 gi|122261441|sp|Q02T74|RS3_PSEAB RecName: Full=30S ribosomal protein S3 gi|171460872|sp|A6UZJ4|RS3_PSEA7 RecName: Full=30S ribosomal protein S3 gi|9950474|gb|AAG07645.1|AE004841_23 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1] gi|115587513|gb|ABJ13528.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14] gi|150962765|gb|ABR84790.1| ribosomal protein S3 [Pseudomonas aeruginosa PA7] gi|218769638|emb|CAW25398.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58] gi|310883718|gb|EFQ42312.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016] Length = 228 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 152/227 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y L DLK+REYLQ LK A V++I I R Sbjct: 1 MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T A T YG G+KV++ + + + +K + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPVAPAPRKKAA 227 >gi|99080096|ref|YP_612250.1| 30S ribosomal protein S3 [Ruegeria sp. TM1040] gi|259416631|ref|ZP_05740551.1| ribosomal protein S3 [Silicibacter sp. TrichCH4B] gi|122984457|sp|Q1GK28|RS3_SILST RecName: Full=30S ribosomal protein S3 gi|99036376|gb|ABF62988.1| SSU ribosomal protein S3P [Ruegeria sp. TM1040] gi|259348070|gb|EEW59847.1| ribosomal protein S3 [Silicibacter sp. TrichCH4B] Length = 239 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL +N TW+SRW+A +YG LL ED+KIRE+++ KQAGVA+++IER Sbjct: 1 MGHKVNPVGMRLQINRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKK+++MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIASMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221 >gi|315497979|ref|YP_004086783.1| ribosomal protein s3 [Asticcacaulis excentricus CB 48] gi|315415991|gb|ADU12632.1| ribosomal protein S3 [Asticcacaulis excentricus CB 48] Length = 251 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 130/227 (57%), Positives = 172/227 (75%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGVN TW+SRWFA EY LLH+DLKIR+ L+ L AGV++I+IER Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFAARQEYAKLLHQDLKIRKELKEKLNAAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +Y+ARPG++IGKKG DI+K+RK +S +T E+ L++ EV KPE+++ L+A+SI Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIDKLRKDISALTEGEVFLNLVEVRKPEVDSQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSIQSAMRLGAKGIRMNLSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ID+G A A T YG G+KV++ + EV + D P A+ + +++ Sbjct: 181 DIDFGFAEALTTYGIIGVKVWIF-KGEVLEHD---PMAQDKRWSQEA 223 >gi|254467163|ref|ZP_05080574.1| ribosomal protein S3 [Rhodobacterales bacterium Y4I] gi|206688071|gb|EDZ48553.1| ribosomal protein S3 [Rhodobacterales bacterium Y4I] Length = 236 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 132/225 (58%), Positives = 174/225 (77%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRW+A +YG LL ED+KIRE+++ KQAG+A+++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P+A R ++ Sbjct: 181 DIDYAHSEAMTPYGIIGIKVWIF-KGEIMEHD---PSARDRKAQE 221 >gi|288957428|ref|YP_003447769.1| small subunit ribosomal protein S3 [Azospirillum sp. B510] gi|288909736|dbj|BAI71225.1| small subunit ribosomal protein S3 [Azospirillum sp. B510] Length = 249 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 131/223 (58%), Positives = 169/223 (75%), Gaps = 5/223 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +Y LLH+DLK+R YLQ L+QAG ++++IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFA-KRDYANLLHQDLKLRGYLQGRLQQAGCSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI ++SARPG++IGKKG DIEK+R +LS MT SE+ L++ E+ KPEI+A LIA++I Sbjct: 60 AKKARITIHSARPGVVIGKKGADIEKLRLELSKMTGSEVSLNIVEIRKPEIDARLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 ASQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDYG A+T YG+CG+KV+V + ++ P A+ + + Sbjct: 180 DIDYGVGTAKTTYGTCGVKVWVFKGEVMAHD----PMAQDKRM 218 >gi|83594014|ref|YP_427766.1| 30S ribosomal protein S3 [Rhodospirillum rubrum ATCC 11170] gi|91207836|sp|Q2RQW6|RS3_RHORT RecName: Full=30S ribosomal protein S3 gi|83576928|gb|ABC23479.1| SSU ribosomal protein S3P [Rhodospirillum rubrum ATCC 11170] Length = 223 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 132/226 (58%), Positives = 174/226 (76%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA G +Y +LLH+DL I++YL+ L QAGV++I+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFA-GRDYASLLHQDLAIKKYLKSKLAQAGVSRIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +++ARPG++IGKKG DIE +RKKL MT +E+HL++ E+ KPE++A L+A++I Sbjct: 60 AKKARITIHTARPGVVIGKKGQDIENLRKKLQVMTGNEVHLNIVEIRKPELDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGALGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A T YG CG+KV+V + E+ + D P A+ + + Sbjct: 180 DVDYGTAAAHTTYGVCGVKVWVF-KGEIMEHD---PMAQDKRSQDQ 221 >gi|226942784|ref|YP_002797857.1| 30S ribosomal protein S3 [Azotobacter vinelandii DJ] gi|226717711|gb|ACO76882.1| 30S ribosomal protein S3 [Azotobacter vinelandii DJ] Length = 228 Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ RLG+ S W+A Y L+ DLK+REYLQ LK A V++I I R Sbjct: 1 MGQKVHPVGIRLGIVKEHTSVWYADRKNYADYLYADLKVREYLQDKLKSASVSRIDIARP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE+++ L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDSMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGQHEELKPQAPAPRKKAAK 228 >gi|70732876|ref|YP_262644.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf-5] gi|91207831|sp|Q4K539|RS3_PSEF5 RecName: Full=30S ribosomal protein S3 gi|68347175|gb|AAY94781.1| ribosomal protein S3 [Pseudomonas fluorescens Pf-5] Length = 228 Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ S W+A G Y L DL +REYLQ LK A V++I I R Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228 >gi|254475420|ref|ZP_05088806.1| ribosomal protein S3 [Ruegeria sp. R11] gi|214029663|gb|EEB70498.1| ribosomal protein S3 [Ruegeria sp. R11] Length = 235 Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 128/225 (56%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL VN TW+SRW+A +YG LL EDL+IR++++ KQAG+A+++IER Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIRDFIKEECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKK+++MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIASMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221 >gi|217976761|ref|YP_002360908.1| ribosomal protein S3 [Methylocella silvestris BL2] gi|254764535|sp|B8ELF7|RS3_METSB RecName: Full=30S ribosomal protein S3 gi|217502137|gb|ACK49546.1| ribosomal protein S3 [Methylocella silvestris BL2] Length = 239 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 140/226 (61%), Positives = 179/226 (79%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA +EYG LLHED+ IR L LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFAGKNEYGKLLHEDMAIRAALMKTLKQAAVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG++IGKKG DI+KIRK ++ MT+SE+ +++ EV KPEI+ATL+A SI Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVAKMTDSEVLINIVEVRKPEIDATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A TAYG+CGIKV++ + E+ + D A + ++ E+D Sbjct: 181 DVDYGTATAHTAYGACGIKVWIF-KGEILEHDPM--AQDKKMAEQD 223 >gi|146308917|ref|YP_001189382.1| 30S ribosomal protein S3 [Pseudomonas mendocina ymp] gi|330505201|ref|YP_004382070.1| 30S ribosomal protein S3 [Pseudomonas mendocina NK-01] gi|172046042|sp|A4XZ84|RS3_PSEMY RecName: Full=30S ribosomal protein S3 gi|145577118|gb|ABP86650.1| SSU ribosomal protein S3P [Pseudomonas mendocina ymp] gi|328919487|gb|AEB60318.1| 30S ribosomal protein S3 [Pseudomonas mendocina NK-01] Length = 228 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 3/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ RLG+ S W+A G Y L+ DLK+R YLQ LK A V++I I R Sbjct: 1 MGQKVHPVGIRLGIVKDHTSVWYADGRNYADYLNADLKVRAYLQDKLKSASVSRIDIARP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP---AAEHRVVEK 225 IDY T A T YG G+KV++ + + + A + +K Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRTEELKPQAPAPRKAAKK 228 >gi|121602435|ref|YP_989003.1| 30S ribosomal protein S3 [Bartonella bacilliformis KC583] gi|121602523|ref|YP_988973.1| 30S ribosomal protein S3 [Bartonella bacilliformis KC583] gi|152060847|sp|A1USM0|RS3_BARBK RecName: Full=30S ribosomal protein S3 gi|120614612|gb|ABM45213.1| ribosomal protein S3 [Bartonella bacilliformis KC583] gi|120614700|gb|ABM45301.1| ribosomal protein S3 [Bartonella bacilliformis KC583] Length = 236 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 145/227 (63%), Positives = 178/227 (78%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNQTWSSRWYADSGEYGRLLHEDLKIRSYVMEELKQAAISKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+R +LS MTN+E L++ E+ KPEI+AT+IAQS+ Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRHQLSEMTNAETSLNIVEIRKPEIDATIIAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY TA A TAYG CG+KV+V + E+ + D A+EHR D+ Sbjct: 181 DVDYSTAEARTAYGVCGVKVWVF-KGEILEHDPM--ASEHRATRNDN 224 >gi|319407420|emb|CBI81071.1| 30S ribosomal protein S3 [Bartonella sp. 1-1C] Length = 236 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 147/226 (65%), Positives = 181/226 (80%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIR Y+ LKQA V+K++IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYADSGEYGRLLHEDVKIRLYVVEELKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPGLIIGK+G DIEK+R+KLS MTN+E L++ E+ KPEI++T+IAQSI Sbjct: 61 HKKCRITIHSARPGLIIGKRGADIEKLRRKLSEMTNAETSLNIVEIRKPEIDSTIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGD 223 >gi|84503636|ref|ZP_01001674.1| 30S ribosomal protein S3 [Oceanicola batsensis HTCC2597] gi|84387933|gb|EAQ00985.1| 30S ribosomal protein S3 [Oceanicola batsensis HTCC2597] Length = 240 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 132/225 (58%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRW+A +YG LL ED+++RE+++ KQAGVA+I+IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDVRMREFIKEECKQAGVARIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEILEHD---PQARDRRAQE 221 >gi|209964046|ref|YP_002296961.1| 30S ribosomal protein S3 [Rhodospirillum centenum SW] gi|226697750|sp|B6IRR2|RS3_RHOCS RecName: Full=30S ribosomal protein S3 gi|209957512|gb|ACI98148.1| ribosomal protein S3 [Rhodospirillum centenum SW] Length = 225 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 170/227 (74%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA +Y LLH+DLK+R++LQ L+ AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFA-ARDYAVLLHQDLKLRKFLQGKLQAAGVSRIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGKKG DIEK+R L M E+ L++ E+ KPE++A LIA++I Sbjct: 60 AKKARVTIHTARPGVVIGKKGADIEKLRGTLGTMAGGEVSLNIVEIRKPELDARLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 ASQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+T YG+CG+KV+V + E+ D P A+ + + + Sbjct: 180 DIDYGTATAKTTYGTCGVKVWVF-KGEILAHD---PMAQDKRAMEQA 222 >gi|288942066|ref|YP_003444306.1| 30S ribosomal protein S3 [Allochromatium vinosum DSM 180] gi|288897438|gb|ADC63274.1| ribosomal protein S3 [Allochromatium vinosum DSM 180] Length = 225 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 109/219 (49%), Positives = 159/219 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S+W+A +Y LL+ DL++R++L+ L +A V++I I+R Sbjct: 1 MGQKVHPNGIRLGIVKDWTSKWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN I +++ARPG++IGKKG DI+K+R K+S M +H+++ E+ KPE++A L+A+ I Sbjct: 61 AKNAHITIHTARPGVVIGKKGEDIDKLRAKVSEMMGIPVHIAIEEIRKPELDAQLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR++Q+ MR GA+G+KV +GRLNGAE++R+E EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSIQNTMRLGAEGIKVSVAGRLNGAEIARSEWAREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A+T YG G+KV++ + D PA + Sbjct: 181 DIDYGFAEAKTTYGVLGVKVWIFKGEVFGDQLPEEPAPK 219 >gi|209884819|ref|YP_002288676.1| ribosomal protein S3 [Oligotropha carboxidovorans OM5] gi|226697738|sp|B6JET9|RS3_OLICO RecName: Full=30S ribosomal protein S3 gi|209873015|gb|ACI92811.1| ribosomal protein S3 [Oligotropha carboxidovorans OM5] Length = 233 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 132/226 (58%), Positives = 176/226 (77%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA +Y LLHED++IRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKGDYAKLLHEDVRIREVLMKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ VYSARPG++IGKKG DI+K++KK++ +T S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVSVYSARPGVVIGKKGADIDKLKKKVAEITESDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYG A A T +G+CG+KV++ + E+ + D P A+ + + + Sbjct: 181 DVDYGVATAFTTFGTCGVKVWLF-KGEILEHD---PMAQDKRLNEG 222 >gi|119899700|ref|YP_934913.1| 30S ribosomal protein S3 [Azoarcus sp. BH72] gi|152060845|sp|A1KB21|RS3_AZOSB RecName: Full=30S ribosomal protein S3 gi|119672113|emb|CAL96027.1| 30S ribosomal protein S3 [Azoarcus sp. BH72] Length = 260 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 121/230 (52%), Positives = 169/230 (73%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRWFA ++ +LHEDLK+R+YL+ L A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRDWGSRWFASSRDFSKMLHEDLKVRDYLKKRLAHASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ ++SARPG++IGKKG DIE +++ L + +H+++ EV KPEI+A LIA SI Sbjct: 61 AKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGVPVHVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI---PAAEHRVVEKDS 227 +IDYG + A+T YG GIKV+V + + ++ + P A++R + + Sbjct: 181 NIDYGVSEAQTTYGVIGIKVWVFKGEMLGRNEQPVVAEPEADNRRGRRGA 230 >gi|296116726|ref|ZP_06835336.1| 30S ribosomal protein S3 [Gluconacetobacter hansenii ATCC 23769] gi|295976938|gb|EFG83706.1| 30S ribosomal protein S3 [Gluconacetobacter hansenii ATCC 23769] Length = 225 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 125/227 (55%), Positives = 170/227 (74%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A ++Y LLH+DLK+R YL+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAD-ADYARLLHDDLKLRSYLRRKLSGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A +I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLTRMAKTDVALNIVEIRKPEIDATLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARVEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222 >gi|330993852|ref|ZP_08317784.1| 30S ribosomal protein S3 [Gluconacetobacter sp. SXCC-1] gi|329759120|gb|EGG75632.1| 30S ribosomal protein S3 [Gluconacetobacter sp. SXCC-1] Length = 225 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 125/227 (55%), Positives = 171/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A ++Y LLH+DLK+R YL+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAD-ADYARLLHDDLKLRAYLRRKLSGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A++I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLARMAKTDVALNIVEIRKPEIDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222 >gi|167645584|ref|YP_001683247.1| 30S ribosomal protein S3 [Caulobacter sp. K31] gi|189044963|sp|B0T2C8|RS3_CAUSK RecName: Full=30S ribosomal protein S3 gi|167348014|gb|ABZ70749.1| ribosomal protein S3 [Caulobacter sp. K31] Length = 249 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 129/226 (57%), Positives = 171/226 (75%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA G +YG LLH+DL +R L+ L QAGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFADGEQYGKLLHQDLAVRAMLKKRLYQAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG+IIGKKG DI+K+RK LS MT E+HL++ E+ KPE +A L+A+SI Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIDKLRKDLSVMTEGEVHLNIVEIRKPETDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A+T YG G+K ++ + EV + D A + R+ + Sbjct: 181 DIDYGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223 >gi|330953191|gb|EGH53451.1| 30S ribosomal protein S3 [Pseudomonas syringae Cit 7] Length = 228 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQNKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY A T YG G+KV++ + + PA + + Sbjct: 181 DIDYANYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228 >gi|28867860|ref|NP_790479.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato str. DC3000] gi|66047769|ref|YP_237610.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae B728a] gi|71736756|ref|YP_276700.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|77461294|ref|YP_350801.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf0-1] gi|213969220|ref|ZP_03397358.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato T1] gi|229592897|ref|YP_002875016.1| 30S ribosomal protein S3 [Pseudomonas fluorescens SBW25] gi|237797438|ref|ZP_04585899.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257483191|ref|ZP_05637232.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623843|ref|ZP_06456797.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648936|ref|ZP_06480279.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675494|ref|ZP_06496384.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae FF5] gi|301381727|ref|ZP_07230145.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato Max13] gi|302061073|ref|ZP_07252614.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato K40] gi|302130786|ref|ZP_07256776.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302189283|ref|ZP_07265956.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae 642] gi|312963362|ref|ZP_07777845.1| ribosomal protein S3 [Pseudomonas fluorescens WH6] gi|330812069|ref|YP_004356531.1| 30S ribosomal protein S3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|34098361|sp|Q889W5|RS3_PSESM RecName: Full=30S ribosomal protein S3 gi|81307864|sp|Q4ZMQ0|RS3_PSEU2 RecName: Full=30S ribosomal protein S3 gi|91207830|sp|Q48D42|RS3_PSE14 RecName: Full=30S ribosomal protein S3 gi|91207833|sp|Q3K5Z4|RS3_PSEPF RecName: Full=30S ribosomal protein S3 gi|28851096|gb|AAO54174.1| ribosomal protein S3 [Pseudomonas syringae pv. tomato str. DC3000] gi|63258476|gb|AAY39572.1| ribosomal protein S3 [Pseudomonas syringae pv. syringae B728a] gi|71557309|gb|AAZ36520.1| ribosomal protein S3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|77385297|gb|ABA76810.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf0-1] gi|213925898|gb|EEB59455.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato T1] gi|229364763|emb|CAY52756.1| 30S ribosomal protein S3 [Pseudomonas fluorescens SBW25] gi|311282442|gb|EFQ61040.1| ribosomal protein S3 [Pseudomonas fluorescens WH6] gi|320322316|gb|EFW78410.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str. B076] gi|320331974|gb|EFW87910.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str. race 4] gi|327380177|gb|AEA71527.1| 30S ribosomal protein S3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|330869425|gb|EGH04134.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879375|gb|EGH13524.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879436|gb|EGH13585.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330891925|gb|EGH24586.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. mori str. 301020] gi|330899731|gb|EGH31150.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330944849|gb|EGH46717.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. pisi str. 1704B] gi|330962519|gb|EGH62779.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330966905|gb|EGH67165.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330969815|gb|EGH69881.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330976646|gb|EGH76690.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988276|gb|EGH86379.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012419|gb|EGH92475.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331018166|gb|EGH98222.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. lachrymans str. M302278PT] gi|331020288|gb|EGI00345.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 228 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY A T YG G+KV++ + + PA + + Sbjct: 181 DIDYANYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228 >gi|294675862|ref|YP_003576477.1| 30S ribosomal protein S3 [Rhodobacter capsulatus SB 1003] gi|294474682|gb|ADE84070.1| 30S ribosomal protein S3 [Rhodobacter capsulatus SB 1003] Length = 238 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 131/225 (58%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRWFA +YG LL EDL++RE++ KQAG+A+++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLRMREFIHEEAKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+N T SE+HL++ EV KPE+++ L+A+SI Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIETLRKKLANFTASELHLNIVEVRKPELDSQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 CQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV++ + E+ + D P A R + Sbjct: 181 DIDYALDEAMTPYGIIGVKVWIF-KGEIMEHD---PQARDRKAAE 221 >gi|83858560|ref|ZP_00952082.1| 30S ribosomal protein S3 [Oceanicaulis alexandrii HTCC2633] gi|83853383|gb|EAP91235.1| 30S ribosomal protein S3 [Oceanicaulis alexandrii HTCC2633] Length = 234 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 132/223 (59%), Positives = 172/223 (77%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+N TW SRWFA+G EY LLHEDL+IREYL+ LK A V++I+IER Sbjct: 1 MGQKVNPIGLRVGINRTWESRWFAKGEEYADLLHEDLRIREYLKKELKNASVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +++ARPG++IGKKG DIEK+R+K+S M E+ L++ EV KPE++ATL+A+S+ Sbjct: 61 HKKCRITIHTARPGVVIGKKGADIEKLRRKVSKMVEGEVFLNLVEVRKPEVDATLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++Q+AMR GA G K++ GRL GAE++R E Y EG VPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSLQTAMRMGALGCKIMCGGRLGGAEIARVEKYSEGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDYG A A+TA G GIKV++ + E+ + D P A+ R + Sbjct: 181 DIDYGFAEAKTAMGIIGIKVWIY-KGEIMEHD---PMAQERRM 219 >gi|163868644|ref|YP_001609853.1| 30S ribosomal protein S3 [Bartonella tribocorum CIP 105476] gi|189044952|sp|A9IW20|RS3_BART1 RecName: Full=30S ribosomal protein S3 gi|161018300|emb|CAK01858.1| 30S ribosomal protein S3 [Bartonella tribocorum CIP 105476] Length = 236 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 146/226 (64%), Positives = 180/226 (79%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDL+IR Y+ L+QA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLRIRSYVLEELRQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIRKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+ Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CGIKV+V + E+ + D A+E R E D Sbjct: 181 DVDYGTAEAKTAYGICGIKVWVF-KGEILEHDPM--ASERRATEAD 223 >gi|149915850|ref|ZP_01904374.1| 30S ribosomal protein S3 [Roseobacter sp. AzwK-3b] gi|149810173|gb|EDM70019.1| 30S ribosomal protein S3 [Roseobacter sp. AzwK-3b] Length = 235 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDLKIR++++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIRDFIEKECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLARMTDSELHLNIVEVRKPELDAALVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV++ + E+ + D P+A R ++ Sbjct: 181 DIDYAHKEAVTPYGIIGVKVWIF-KGEIMEHD---PSARDRKAQE 221 >gi|58038849|ref|YP_190813.1| 30S ribosomal protein S3 [Gluconobacter oxydans 621H] gi|62287182|sp|Q5FTY9|RS3_GLUOX RecName: Full=30S ribosomal protein S3 gi|58001263|gb|AAW60157.1| SSU ribosomal protein S3P [Gluconobacter oxydans 621H] Length = 225 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLGVN TW+SRW+A G +Y LLHEDLK+R +L+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGVNRTWDSRWYA-GQDYARLLHEDLKLRAFLRRKLSGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DI+ +RK+LS M +++ L++ E+ KPEI+ATL+A++I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDALRKELSRMAKTDVALNIVEIRKPEIDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRA+QSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAIQSAMRLGAQGIRITCGGRLGGAEIARAEKYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222 >gi|319899093|ref|YP_004159186.1| 30S ribosomal protein S3 [Bartonella clarridgeiae 73] gi|319403057|emb|CBI76612.1| 30S ribosomal protein S3 [Bartonella clarridgeiae 73] Length = 236 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 148/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSDEYGRLLHEDLKIRLYVIEELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI++T+IAQSI Sbjct: 61 HKKCRITIHSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIIEIRKPEIDSTIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CG+KV+V + E+ + D A+E R E D Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRATEGD 223 >gi|146281176|ref|YP_001171329.1| 30S ribosomal protein S3 [Pseudomonas stutzeri A1501] gi|152060896|sp|A4VHN6|RS3_PSEU5 RecName: Full=30S ribosomal protein S3 gi|145569381|gb|ABP78487.1| ribosomal protein S3 [Pseudomonas stutzeri A1501] gi|327479329|gb|AEA82639.1| 30S ribosomal protein S3 [Pseudomonas stutzeri DSM 4166] Length = 228 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A G Y L DL +REYLQ LK A V++I I R Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRHEELKPQAPAPRKKAAK 228 >gi|254421013|ref|ZP_05034737.1| ribosomal protein S3 [Brevundimonas sp. BAL3] gi|196187190|gb|EDX82166.1| ribosomal protein S3 [Brevundimonas sp. BAL3] Length = 251 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 174/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRWFA G++Y LLH+DLK+RE+L+ L AGV++I+IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWFAAGADYSRLLHQDLKLREWLRERLAAAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIEKLRKDISAQTEGEVHLNIIEVRKPETDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRLGAKGIRMNVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A+T YG G+KV+V + EV + D P A+ + +++ Sbjct: 181 DIDYGFYEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWAQEA 223 >gi|312115693|ref|YP_004013289.1| ribosomal protein S3 [Rhodomicrobium vannielii ATCC 17100] gi|311220822|gb|ADP72190.1| ribosomal protein S3 [Rhodomicrobium vannielii ATCC 17100] Length = 254 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 129/226 (57%), Positives = 172/226 (76%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRW+A EYG LLHED +IRE++ +QAG++K++IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYADKGEYGRLLHEDFRIREFIMKQRRQAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ V++ARPG++IGKKG DIEK+R +L+ T SE++L++ EV KPE++ATL A+ I Sbjct: 61 HRKCRVTVHTARPGILIGKKGADIEKLRGQLAKFTTSEVYLNIVEVRKPELDATLAAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRA QSA+R GA GV++ +GRL GAE++R E YL+GRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRATQSALRLGAQGVRIYVAGRLGGAEIARMEWYLDGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGTAVAETAYG G+KV++ + E+ + D ++ Sbjct: 181 DIDYGTAVAETAYGVIGVKVWIF-KGEILEHDPMAQERRSLESQES 225 >gi|154253183|ref|YP_001414007.1| 30S ribosomal protein S3 [Parvibaculum lavamentivorans DS-1] gi|171769631|sp|A7HWR7|RS3_PARL1 RecName: Full=30S ribosomal protein S3 gi|154157133|gb|ABS64350.1| ribosomal protein S3 [Parvibaculum lavamentivorans DS-1] Length = 236 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 139/224 (62%), Positives = 181/224 (80%), Gaps = 3/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRWFA EYG LLHED+KIRE L+ LKQAG++KI+IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFAGRHEYGKLLHEDIKIREVLEKQLKQAGISKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG++IGKKG DIEK+R+++ +T SE+HL++ EV KPEI+ATL+A++I Sbjct: 61 HKKCRVAIHTARPGVVIGKKGADIEKLRREIGKITASEVHLNIVEVRKPEIDATLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAGGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A+TAYG+CG+KV++ + E+ + D A+E R +E Sbjct: 181 DIDYGVATAKTAYGTCGVKVWIY-KGEILEHDPM--ASERRALE 221 >gi|89070551|ref|ZP_01157840.1| 30S ribosomal protein S3 [Oceanicola granulosus HTCC2516] gi|89043858|gb|EAR50056.1| 30S ribosomal protein S3 [Oceanicola granulosus HTCC2516] Length = 235 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL ED+KIRE+++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLAKMTDSELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEAVTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221 >gi|257095034|ref|YP_003168675.1| 30S ribosomal protein S3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047558|gb|ACV36746.1| ribosomal protein S3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 282 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 161/225 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + +L+ED+K+REYL+ LK A V +ILIER Sbjct: 1 MGQKIHPAGFRLAVTRDWSSRWYANKKNFAGMLNEDIKVREYLKKKLKHASVGRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ ++SARPG++IGKKG +I+ +R L + +H+S+ E+ KPE++A LIA SI Sbjct: 61 AKNARVTIFSARPGVVIGKKGEEIDHLRVALQKIMGVPVHVSIEEIRKPELDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY T+ A T YG G+KV+V + ++ + + E E+ Sbjct: 181 DIDYATSEALTTYGLIGVKVWVFKGEILNRQEQAALSPEAAADER 225 >gi|319404419|emb|CBI78022.1| 30S ribosomal protein S3 [Bartonella rochalimae ATCC BAA-1498] Length = 236 Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 146/226 (64%), Positives = 181/226 (80%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHED+KIR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDVKIRLYVIEELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPGLIIGK+G DIEK+R+KLS MT++E L++ E+ KPEI++T+IAQSI Sbjct: 61 HKKCRITIHSARPGLIIGKRGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDSTIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGD 223 >gi|24981839|gb|AAN66090.1|AE016238_8 ribosomal protein S3 [Pseudomonas putida KT2440] Length = 237 Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 114/228 (50%), Positives = 154/228 (67%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A G+ Y L +DLK REYLQ LK A V++I I R Sbjct: 10 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 70 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 237 >gi|299135251|ref|ZP_07028442.1| ribosomal protein S3 [Afipia sp. 1NLS2] gi|298590228|gb|EFI50432.1| ribosomal protein S3 [Afipia sp. 1NLS2] Length = 234 Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 135/227 (59%), Positives = 176/227 (77%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA EY LLHED++IRE L LKQA VA+I+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKGEYAKLLHEDVRIREVLMKELKQAAVARIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ VYSARPG++IGKKG DI+K++KK++ +T S++ +++ E+ KPE++ATL+A+SI Sbjct: 61 HKKCRVSVYSARPGVVIGKKGADIDKLKKKVAEITQSDVVINIVEIRKPELDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T +G+CG+KV++ + E+ + D P A+ + + S Sbjct: 181 DIDYGVATAFTTFGTCGVKVWLF-KGEILEHD---PMAQDKRLNDTS 223 >gi|240850829|ref|YP_002972229.1| 30S ribosomal protein S3 [Bartonella grahamii as4aup] gi|240267952|gb|ACS51540.1| 30S ribosomal protein S3 [Bartonella grahamii as4aup] Length = 236 Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 148/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRSYVLEELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI ++SARPGLIIGKKG DIEK+R+KLS MT++E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRITIHSARPGLIIGKKGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+ Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CGIKV+V + E+ + D A+E R E D Sbjct: 181 DVDYGTAEAKTAYGICGIKVWVF-KGEILEHDPM--ASERRATEVD 223 >gi|329850213|ref|ZP_08265058.1| ribosomal protein S3 [Asticcacaulis biprosthecum C19] gi|328840528|gb|EGF90099.1| ribosomal protein S3 [Asticcacaulis biprosthecum C19] Length = 253 Score = 278 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 129/227 (56%), Positives = 172/227 (75%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+N TW+SRWFA+ EY LLH+DL IR+ L+ L AGV++I+IER Sbjct: 1 MGQKANPIGLRLGINRTWDSRWFAQRQEYAKLLHQDLLIRKVLKEKLNAAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +Y+ARPG++IGKKG DI+K+RK +S +T+ E+ L++ EV KPE++A L+A+SI Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIDKLRKDVSVITDGEVFLNLVEVRKPEVDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSIQSAMRLGAKGIRMNLSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ID G A A T YG G+KV++ + EV + D P+A+ + +++ Sbjct: 181 DIDMGFAEALTTYGIIGVKVWIF-KGEVLEHD---PSAQDKRWAQEA 223 >gi|302382624|ref|YP_003818447.1| ribosomal protein S3 [Brevundimonas subvibrioides ATCC 15264] gi|302193252|gb|ADL00824.1| ribosomal protein S3 [Brevundimonas subvibrioides ATCC 15264] Length = 250 Score = 278 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 133/227 (58%), Positives = 170/227 (74%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLGVN TW+SRWFA G Y LLH+DL +R +L+ L AGV++I+IER Sbjct: 1 MGQKINPIGFRLGVNRTWDSRWFADGPSYARLLHQDLALRTWLKERLNAAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I Sbjct: 61 HKKCRVTIYAARPGVVIGKKGADIEKLRKDISARTEGEVHLNIVEVRKPETDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A+T YG G+KV+V + EV + D P A+ + ++ Sbjct: 181 DIDYGFIEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWALEA 223 >gi|307946292|ref|ZP_07661627.1| ribosomal protein S3 [Roseibium sp. TrichSKD4] gi|307769956|gb|EFO29182.1| ribosomal protein S3 [Roseibium sp. TrichSKD4] Length = 242 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 136/227 (59%), Positives = 173/227 (76%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRWFA EYG LLHED +IRE+L LKQA V+KI+IER Sbjct: 1 MGHKVNPIGMRLGINRTWDSRWFAPKGEYGGLLHEDFRIREFLMNELKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK R+ ++S RPG++IGKKG DIE++RKK++++T SE+H+++ EV KPE++ATL+A SI Sbjct: 61 HKKARVTIHSGRPGVVIGKKGADIERLRKKIADITKSEVHINIVEVRKPEVDATLVAASI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQSAMR GA G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSVQSAMRLGAQGIKITCGGRLGGAEIARIEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A TAYG CG+KV++ + E+ + D P A R + S Sbjct: 181 DIDYGVASAHTAYGVCGVKVWIF-KGEILEHD---PMASERRATQGS 223 >gi|170738697|ref|YP_001767352.1| ribosomal protein S3 [Methylobacterium sp. 4-46] gi|168192971|gb|ACA14918.1| ribosomal protein S3 [Methylobacterium sp. 4-46] Length = 252 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 132/226 (58%), Positives = 174/226 (76%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRW+A EY L+HED+ IR+ L LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYANKGEYARLMHEDVAIRQALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIIEVRKPEIDATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A T YG+CGIKV+V + E+ + D P A+ + +++ Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKRAQEE 222 >gi|148545745|ref|YP_001265847.1| 30S ribosomal protein S3 [Pseudomonas putida F1] gi|161378146|ref|NP_742626.2| 30S ribosomal protein S3 [Pseudomonas putida KT2440] gi|167031506|ref|YP_001666737.1| 30S ribosomal protein S3 [Pseudomonas putida GB-1] gi|170723900|ref|YP_001751588.1| 30S ribosomal protein S3 [Pseudomonas putida W619] gi|325272013|ref|ZP_08138457.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51] gi|34098362|sp|Q88QM9|RS3_PSEPK RecName: Full=30S ribosomal protein S3 gi|172048429|sp|A5VXQ3|RS3_PSEP1 RecName: Full=30S ribosomal protein S3 gi|148509803|gb|ABQ76663.1| SSU ribosomal protein S3P [Pseudomonas putida F1] gi|166857994|gb|ABY96401.1| ribosomal protein S3 [Pseudomonas putida GB-1] gi|169761903|gb|ACA75219.1| ribosomal protein S3 [Pseudomonas putida W619] gi|313496825|gb|ADR58191.1| RpsC [Pseudomonas putida BIRD-1] gi|324102844|gb|EGC00247.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51] Length = 228 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 114/228 (50%), Positives = 154/228 (67%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A G+ Y L +DLK REYLQ LK A V++I I R Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228 >gi|302344350|ref|YP_003808879.1| ribosomal protein S3 [Desulfarculus baarsii DSM 2075] gi|301640963|gb|ADK86285.1| ribosomal protein S3 [Desulfarculus baarsii DSM 2075] Length = 219 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 114/218 (52%), Positives = 155/218 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+SRWFA +Y L+ ED +IR++L+ L AGV+ I IER Sbjct: 1 MGQKVNPIGFRLGVIRTWDSRWFANKRDYAGLVFEDHQIRKFLKKKLFHAGVSHIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPG++IGKKG++IE ++K L + E+ L ++EV KPE++A L+A+S+ Sbjct: 61 ANKAKIRIHTARPGIVIGKKGSEIESVKKALEQLIKREVMLDIHEVRKPEVDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMKRAV +A++ GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ASQLERRIAFRRAMKRAVTTALKLGAQGIRIQCSGRLGGAEMARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV + + + D D T A Sbjct: 181 DIDYGFAEARTTYGVIGVKVLIFKGEVLDDRDKTQAQA 218 >gi|319405892|emb|CBI79524.1| 30S ribosomal protein S3 [Bartonella sp. AR 15-3] Length = 236 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 147/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIR Y+ LKQA V+K++IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYADSGEYGRLLHEDVKIRLYIIEELKQAAVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI V+SARPGLIIGK+G DIEK+R+KLS MT++E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRITVHSARPGLIIGKRGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CG+KV+V + E+ + D A+E R E D Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRATEGD 223 >gi|163739444|ref|ZP_02146854.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis BS107] gi|163740238|ref|ZP_02147632.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis 2.10] gi|161386096|gb|EDQ10471.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis 2.10] gi|161387197|gb|EDQ11556.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis BS107] Length = 235 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL VN TW+SRW+A +YG LL EDL+IR++++ KQAG+A+++IER Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIRDFIKEECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIK ++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221 >gi|260577175|ref|ZP_05845152.1| ribosomal protein S3 [Rhodobacter sp. SW2] gi|259020649|gb|EEW23968.1| ribosomal protein S3 [Rhodobacter sp. SW2] Length = 236 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 130/227 (57%), Positives = 168/227 (74%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+R ++ KQAGV+K++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMRAFIHEECKQAGVSKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ T SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLTVFTKSELHLNIVEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TQQLERRVSFRRAMKRAVQNAMRIGALGIRVNVSGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY + A TAYG G+KV++ + E+ + D H ++ + Sbjct: 181 DIDYALSEAMTAYGIIGVKVWIF-KGEILEHDPQAHDRRHAEAQEGA 226 >gi|114327224|ref|YP_744381.1| 30S ribosomal protein S3 [Granulibacter bethesdensis CGDNIH1] gi|122327797|sp|Q0BUP4|RS3_GRABC RecName: Full=30S ribosomal protein S3 gi|114315398|gb|ABI61458.1| SSU ribosomal protein S3P [Granulibacter bethesdensis CGDNIH1] Length = 225 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 124/227 (54%), Positives = 170/227 (74%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A G +Y LLH+DLK+R +L+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAGG-DYSRLLHDDLKLRGHLRKKLSGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DIE +RK L+ M +++ L++ E+ KPEI+ATL+A++I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIEALRKGLTGMAGTDVALNIVEIRKPEIDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG+CG+KV++ + ++ P A+ R + + Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIFKGEILAQD----PMAQDRRAAEQA 222 >gi|114771263|ref|ZP_01448683.1| 30S ribosomal protein S3 [alpha proteobacterium HTCC2255] gi|114548188|gb|EAU51075.1| 30S ribosomal protein S3 [alpha proteobacterium HTCC2255] Length = 239 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 136/225 (60%), Positives = 177/225 (78%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRL VN TW+SRW+A G +YG+LL ED+KIRE+++ QAGVA++++ER Sbjct: 1 MGQKINPIGFRLQVNRTWDSRWYAEGDKYGSLLLEDIKIREFVKKECVQAGVARVIVERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIE +RKKL+ T+SE+HL++ EV KPE++A L+A+S+ Sbjct: 61 HKKCRVTIHSARPGVIIGKKGADIETLRKKLAAFTDSELHLNIVEVRKPEMDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRINVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIKV++ + E+ + D PAA R +E+ Sbjct: 181 DIDYARAEGMTAYGIIGIKVWIF-KGEIMEHD---PAARDRRIEE 221 >gi|167629473|ref|YP_001679972.1| 30S ribosomal protein s3 [Heliobacterium modesticaldum Ice1] gi|167592213|gb|ABZ83961.1| 30S ribosomal protein s3 [Heliobacterium modesticaldum Ice1] Length = 251 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W++RWFA G Y LLHEDLKIR++++ L AG+ +I IER Sbjct: 1 MGQKVNPKGLRIGIIKDWDARWFA-GKNYAELLHEDLKIRKFVKSKLYAAGIPRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G ++E +RK+L MT +++++ EV KPE++A L+A+++ Sbjct: 60 ANRVKVTIHTAKPGIVIGRGGAEVENLRKELEKMTGRAVNINIAEVKKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R FRRAMK++V MR GA+G+K++ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AAQLEKRTSFRRAMKQSVGRTMRLGAEGIKIMVSGRLGGAEIARTEWYNEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV++ + + + + + Sbjct: 180 DIDYGFAEARTTYGIIGVKVWIYKGEILPGAKNRTGESRE 219 >gi|16125503|ref|NP_420067.1| 30S ribosomal protein S3 [Caulobacter crescentus CB15] gi|221234249|ref|YP_002516685.1| 30S ribosomal protein S3 [Caulobacter crescentus NA1000] gi|27734530|sp|Q9A8U7|RS3_CAUCR RecName: Full=30S ribosomal protein S3 gi|254764520|sp|B8H4E0|RS3_CAUCN RecName: Full=30S ribosomal protein S3 gi|13422585|gb|AAK23235.1| ribosomal protein S3 [Caulobacter crescentus CB15] gi|220963421|gb|ACL94777.1| SSU ribosomal protein S3P [Caulobacter crescentus NA1000] Length = 250 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 128/226 (56%), Positives = 172/226 (76%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N TW+SRWFA G++YG LLH+DL +R L+ L QAGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFADGNQYGKLLHQDLAVRAALKKRLYQAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +Y+ARPG+IIGKKG DI+K+RK LS MT E+HL++ E+ KPE +A L+A+SI Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIDKLRKDLSIMTEGEVHLNIVEIRKPETDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 ID+G A A+T YG G+K ++ + EV + D A + R+ + Sbjct: 181 DIDFGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223 >gi|94498482|ref|ZP_01305038.1| 30S ribosomal protein S3 [Sphingomonas sp. SKA58] gi|94422025|gb|EAT07070.1| 30S ribosomal protein S3 [Sphingomonas sp. SKA58] Length = 231 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 127/215 (59%), Positives = 164/215 (76%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRWFA G +YG LL EDLKIR+Y+ L QA ++K++IER Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGQDYGRLLLEDLKIRQYIMKTLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+RKKL N+T+S++ L++ E+ KPE+++ L+AQ I Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGNLTSSDVSLNIVEIRKPEVDSKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEATAHTAYGVCGIKVWIF-KGEILGHDPMA 214 >gi|163733819|ref|ZP_02141261.1| 30S ribosomal protein S3 [Roseobacter litoralis Och 149] gi|161392930|gb|EDQ17257.1| 30S ribosomal protein S3 [Roseobacter litoralis Och 149] Length = 235 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 170/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKMTASELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A+TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 DIDYAHVEAKTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221 >gi|304391459|ref|ZP_07373401.1| ribosomal protein S3 [Ahrensia sp. R2A130] gi|303295688|gb|EFL90046.1| ribosomal protein S3 [Ahrensia sp. R2A130] Length = 236 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 173/225 (76%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+N TW+SRWFA +Y ++L ED+ IR Y++ LK A ++K++IER Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFATKGDYASMLDEDINIRNYIEKELKAASISKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ RPGLIIGKKG DIEK+++K+ MT++E+ +++ E+ KPE++AT++AQSI Sbjct: 61 HKKCRVTIHAGRPGLIIGKKGADIEKLKRKVQTMTSAEVSVNIVEIRKPELDATIVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQSA+R GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSVQSAIRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYGTA AETAYG CG+KV++ + E+ + D H ++ Sbjct: 181 DIDYGTAEAETAYGICGVKVWIF-KGEILEHDPMAHERRHTEAQE 224 >gi|110678727|ref|YP_681734.1| 30S ribosomal protein S3 [Roseobacter denitrificans OCh 114] gi|123065752|sp|Q16AE5|RS3_ROSDO RecName: Full=30S ribosomal protein S3 gi|109454843|gb|ABG31048.1| ribosomal protein S3 [Roseobacter denitrificans OCh 114] Length = 235 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKMTASELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 DIDYAHVEAATAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221 >gi|308047997|ref|YP_003911563.1| 30S ribosomal protein S3P [Ferrimonas balearica DSM 9799] gi|307630187|gb|ADN74489.1| SSU ribosomal protein S3P [Ferrimonas balearica DSM 9799] Length = 229 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S W+A +Y L D ++R++L+ LK A V++I IER Sbjct: 1 MGQKVHPNGIRLGITKPWSSTWYAEKKDYADNLFSDHEVRQFLKQELKNASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R K++ + ++++EV KPE++A L+ S+ Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRLKVAKLAGVPAQINISEVRKPELDAQLVGDSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKIEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG GIKV++ + + + + K Sbjct: 181 DIDYATSEAHTTYGVIGIKVWIFKGEVLGGMPVVAEEPKAQPKRKG 226 >gi|39997943|ref|NP_953894.1| 30S ribosomal protein S3 [Geobacter sulfurreducens PCA] gi|61215646|sp|Q748Z4|RS3_GEOSL RecName: Full=30S ribosomal protein S3 gi|39984888|gb|AAR36244.1| ribosomal protein S3 [Geobacter sulfurreducens PCA] gi|298506882|gb|ADI85605.1| ribosomal protein S3 [Geobacter sulfurreducens KN400] Length = 211 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 116/212 (54%), Positives = 161/212 (75%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRLGV TW+SRW+A ++Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 MGQKVNPVGFRLGVIRTWDSRWYAE-ADYSKLLHEDLKLRNFLKKRLYNSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+ARPGLIIGKKG ++E ++K+L+ +T+ EI+L++ EV KPE++A L+A+++ Sbjct: 60 ANKAKINIYTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV + + + Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQK 211 >gi|104779761|ref|YP_606259.1| 30S ribosomal protein S3 [Pseudomonas entomophila L48] gi|123381068|sp|Q1IFW0|RS3_PSEE4 RecName: Full=30S ribosomal protein S3 gi|95108748|emb|CAK13442.1| 30S ribosomal subunit protein S3 [Pseudomonas entomophila L48] Length = 228 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 113/228 (49%), Positives = 154/228 (67%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A G+ Y L +DL+ REYLQ LK A V++I I R Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLQTREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + PA + + Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228 >gi|319408759|emb|CBI82416.1| 30S ribosomal protein S3 [Bartonella schoenbuchensis R1] Length = 236 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 149/226 (65%), Positives = 182/226 (80%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRLYVIEELKQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRII++SARPGLIIGKKG DIEK+R KLS MTN+E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRIIIHSARPGLIIGKKGADIEKLRCKLSEMTNAETSLNIVEIRKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGTA A+TAYG CG+KV+V + E+ + + A+E+R +E D Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHNPM--ASENRAMESD 223 >gi|114570339|ref|YP_757019.1| 30S ribosomal protein S3P [Maricaulis maris MCS10] gi|122315789|sp|Q0ANQ6|RS3_MARMM RecName: Full=30S ribosomal protein S3 gi|114340801|gb|ABI66081.1| SSU ribosomal protein S3P [Maricaulis maris MCS10] Length = 234 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 135/226 (59%), Positives = 173/226 (76%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGVN TW SRW+A EY LLHED+KIR+ L+ LK A V+KI+IER Sbjct: 1 MGQKVNPIGLRLGVNRTWESRWYAGAGEYAKLLHEDIKIRKMLKERLKNASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ V++ARPG++IGKKG+DIE +RK+LS M + E+HL++ EV KPEI+A L+A+SI Sbjct: 61 HKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEVRKPEIDAALVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR++QSAMR GA G K++ GRL GAE++RTE Y EG VPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRMGAKGCKIVCGGRLGGAEIARTEQYNEGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGT A+TA G GIKV++ + E+ + D P A+ R +++ Sbjct: 181 DIDYGTCEAKTAMGIIGIKVWIY-KGEIMEHD---PNAQERRLQES 222 >gi|115376080|ref|ZP_01463325.1| ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1] gi|310821000|ref|YP_003953358.1| 30S ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1] gi|115366895|gb|EAU65885.1| ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1] gi|309394072|gb|ADO71531.1| 30S ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1] Length = 220 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 111/221 (50%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV TW+S+WF Y LHED++IRE+++ L AGV+K+ IER Sbjct: 1 MGQKVHPIGFRLGVIKTWDSKWF-EHKNYAQWLHEDIRIREFVKKSLNHAGVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V++ARPG++IGK+G IE ++K L T +E+ L++ EV K E +A L+A++I Sbjct: 60 ANKVKVNVHTARPGIVIGKRGAGIETVKKDLQQFTKNEVFLNIVEVRKAETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+A+Q+AM+FGA G++V SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKALQTAMKFGAKGIRVACSGRLGGAEMARYEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A+T YG G KV++ + + P +R Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWICRGEVLPGKGGQAPLPSNR 220 >gi|258512664|ref|YP_003186098.1| 30S ribosomal protein S3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479390|gb|ACV59709.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 226 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W ++W+A +Y LLHEDLKIR Y+ LK A + + IER Sbjct: 1 MGQKVNPIGLRIGIIRDWEAKWYANKKDYQELLHEDLKIRNYVMQRLKDAAIGSVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T +H+S++E+ +P++ A L+A+SI Sbjct: 61 ANRINVTIHTAKPGMVIGKGGQEVDALRNELNKLTGKRVHISISEIKQPDLCAKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMK+A+Q +MR GA GV+V SGRL GAE++RTE Y+EG VPLQTLRA Sbjct: 121 AQQLERRVAFRRAMKQAIQRSMRAGAKGVRVQVSGRLGGAEIARTEGYVEGTVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A A T YG G+KV++ + + + A V+ Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEVLPKRKNAQAEAASEAVQGG 226 >gi|83949789|ref|ZP_00958522.1| 30S ribosomal protein S3 [Roseovarius nubinhibens ISM] gi|83837688|gb|EAP76984.1| 30S ribosomal protein S3 [Roseovarius nubinhibens ISM] Length = 235 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL ED+ IRE+++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYANTKDYGNLLLEDIAIREFIEKECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAAMTDSELHLNIVEVRKPELDAALVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIKV++ + E+ + D P+A R ++ Sbjct: 181 DIDYAHSEAMTPYGIIGIKVWIF-KGEIMEHD---PSARDRKAQE 221 >gi|331005020|ref|ZP_08328427.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC1989] gi|330421186|gb|EGG95445.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC1989] Length = 228 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 155/224 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A +EY LH DL +R+Y++ L A V+++ IER Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYANSNEYADKLHADLSVRKYIETKLASASVSRVDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++ARPG++IGKKG D+EK+R ++S + +H+++ E+ KP+++A L+A+S+ Sbjct: 61 ANTAKVTIHTARPGIVIGKKGEDVEKLRNEVSKIMGVPVHINIEEIRKPDLDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRQGAQGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + + D PA + + + Sbjct: 181 DIDYSTAEAATTYGIIGVKVWIFKGEVIGDVVDAEPAPKKKNSK 224 >gi|49475788|ref|YP_033829.1| 30S ribosomal protein S3 [Bartonella henselae str. Houston-1] gi|61215538|sp|Q6G2X1|RS3_BARHE RecName: Full=30S ribosomal protein S3 gi|49238595|emb|CAF27836.1| 30S ribosomal protein s3 [Bartonella henselae str. Houston-1] Length = 236 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 145/225 (64%), Positives = 175/225 (77%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA V+KI+IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRLYVLEELKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +YSARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRVTIYSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIHKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSA+R GA+G+++ SGRL GAE++R E Y EGRVPL TLR+ Sbjct: 121 AQQLERRVAFRRAMKRAVQSALRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +DYGTA A+TAYG CG+KV+V + + P A R + Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVFKGEIL----EYDPMASERRAAE 221 >gi|188581381|ref|YP_001924826.1| ribosomal protein S3 [Methylobacterium populi BJ001] gi|179344879|gb|ACB80291.1| ribosomal protein S3 [Methylobacterium populi BJ001] Length = 248 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 133/224 (59%), Positives = 173/224 (77%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPE++ATL+A+SI Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEVDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A T YG+CGIKV+V + E+ + D P A+ + + Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220 >gi|163745546|ref|ZP_02152906.1| 30S ribosomal protein S3 [Oceanibulbus indolifex HEL-45] gi|161382364|gb|EDQ06773.1| 30S ribosomal protein S3 [Oceanibulbus indolifex HEL-45] Length = 235 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 128/225 (56%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ E+ KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRQKIAKMTKSELHLNIVEIRKPELDAHLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 DIDYAHVEAMTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221 >gi|83854971|ref|ZP_00948501.1| 30S ribosomal protein S3 [Sulfitobacter sp. NAS-14.1] gi|83941493|ref|ZP_00953955.1| 30S ribosomal protein S3 [Sulfitobacter sp. EE-36] gi|83842814|gb|EAP81981.1| 30S ribosomal protein S3 [Sulfitobacter sp. NAS-14.1] gi|83847313|gb|EAP85188.1| 30S ribosomal protein S3 [Sulfitobacter sp. EE-36] Length = 235 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 126/225 (56%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAG+A+++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECAQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+K++ +T S++HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKITKSDLHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 DIDYAHVEASTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221 >gi|103488289|ref|YP_617850.1| 30S ribosomal protein S3 [Sphingopyxis alaskensis RB2256] gi|123379480|sp|Q1GPA5|RS3_SPHAL RecName: Full=30S ribosomal protein S3 gi|98978366|gb|ABF54517.1| SSU ribosomal protein S3P [Sphingopyxis alaskensis RB2256] Length = 235 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 130/215 (60%), Positives = 165/215 (76%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL VN TW+SRWFA G +YG +L EDLKIR+Y+ L QA ++K++IER Sbjct: 1 MGQKSNPIGLRLQVNRTWDSRWFAEGEDYGRMLVEDLKIRQYVFKALPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+RKKL MT S++ L++ E+ KPE++A L+AQ I Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGEMTGSDVSLNIVEIRKPEVDAKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ADQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214 >gi|300309462|ref|YP_003773554.1| 30S ribosomal protein S3 [Herbaspirillum seropedicae SmR1] gi|300072247|gb|ADJ61646.1| 30S ribosomal subunit S3 protein [Herbaspirillum seropedicae SmR1] Length = 272 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 118/225 (52%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRW+A + + +L+EDLK+R YL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWGSRWYAGNNNFADMLNEDLKVRAYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ L+ + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALAKLMGVPVHVNIEEIRKPEADAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG AET YG G+KV+V D +++ +S + E +K Sbjct: 181 DIDYGFGEAETTYGIIGVKVWVYKGDRLANGESPVLVGEPEDDKK 225 >gi|296533993|ref|ZP_06896509.1| 30S ribosomal protein S3 [Roseomonas cervicalis ATCC 49957] gi|296265659|gb|EFH11768.1| 30S ribosomal protein S3 [Roseomonas cervicalis ATCC 49957] Length = 225 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 126/227 (55%), Positives = 169/227 (74%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRWFA +Y LLH+DLK+R+ L+ LK AGV+K++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFAGD-DYARLLHDDLKLRKTLKDRLKGAGVSKVIIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGKKG DIE +RK L+ + +E+ L++ E+ KPEI A L+A+SI Sbjct: 60 AKKPRVTIHAARPGVVIGKKGADIEVLRKDLAKLAGAEVALNIVEIRKPEIEAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAGGIRINCGGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYGTA A+T YG+CG+KV++ + E+ D P A+ + + + Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEIMAHD---PLAQDKRAAEQA 222 >gi|153210013|ref|ZP_01947564.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177'] gi|154706269|ref|YP_001425176.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111] gi|161830479|ref|YP_001596191.1| ribosomal protein S3 [Coxiella burnetii RSA 331] gi|165924132|ref|ZP_02219964.1| ribosomal protein S3 [Coxiella burnetii RSA 334] gi|212213244|ref|YP_002304180.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212] gi|212218080|ref|YP_002304867.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154] gi|189044972|sp|A9KD25|RS3_COXBN RecName: Full=30S ribosomal protein S3 gi|189044973|sp|A9NAN0|RS3_COXBR RecName: Full=30S ribosomal protein S3 gi|226697691|sp|B6J5D8|RS3_COXB1 RecName: Full=30S ribosomal protein S3 gi|226697692|sp|B6J257|RS3_COXB2 RecName: Full=30S ribosomal protein S3 gi|120575196|gb|EAX31820.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177'] gi|154355555|gb|ABS77017.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111] gi|161762346|gb|ABX77988.1| ribosomal protein S3 [Coxiella burnetii RSA 331] gi|165916414|gb|EDR35018.1| ribosomal protein S3 [Coxiella burnetii RSA 334] gi|212011654|gb|ACJ19035.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212] gi|212012342|gb|ACJ19722.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154] Length = 227 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 114/225 (50%), Positives = 158/225 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IER Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +II++SARPG+IIGKKG +IE +R ++S + +H+++ EV KPE++A L+A++I Sbjct: 61 ARNAKIIIHSARPGVIIGKKGGEIEALRDEISKVMKVPVHITIEEVRKPELDAKLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+ +R GA GVK+ SGRL GAE++RTE Y EGRVPL T RA Sbjct: 121 AQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A+T YG G+KV++ + + AA E+ Sbjct: 181 DIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEE 225 >gi|29653596|ref|NP_819288.1| SSU ribosomal protein S3P [Coxiella burnetii RSA 493] gi|30581016|sp|O85388|RS3_COXBU RecName: Full=30S ribosomal protein S3 gi|29540858|gb|AAO89802.1| SSU ribosomal protein S3P [Coxiella burnetii RSA 493] Length = 227 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 113/225 (50%), Positives = 157/225 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IER Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +II++SARPG+IIGKKG +IE +R ++ + +H+++ EV KPE++A L+A++I Sbjct: 61 ARNAKIIIHSARPGVIIGKKGGEIEALRDEIFKVMKVPVHITIEEVRKPELDAKLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+ +R GA GVK+ SGRL GAE++RTE Y EGRVPL T RA Sbjct: 121 AQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A+T YG G+KV++ + + AA E+ Sbjct: 181 DIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEE 225 >gi|162149168|ref|YP_001603629.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5] gi|209545088|ref|YP_002277317.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5] gi|189045011|sp|A9H3P5|RS3_GLUDA RecName: Full=30S ribosomal protein S3 gi|161787745|emb|CAP57341.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5] gi|209532765|gb|ACI52702.1| ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5] Length = 225 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 124/227 (54%), Positives = 171/227 (75%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRW+A G++Y LLH+DLK+R +L+ L AGV++++IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYA-GADYSRLLHDDLKLRAHLRRKLSGAGVSRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A++I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLTRMAKTDVALNIVEIRKPEIDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222 >gi|163851591|ref|YP_001639634.1| ribosomal protein S3 [Methylobacterium extorquens PA1] gi|218530400|ref|YP_002421216.1| ribosomal protein S3 [Methylobacterium chloromethanicum CM4] gi|240138759|ref|YP_002963231.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens AM1] gi|254561359|ref|YP_003068454.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens DM4] gi|163663196|gb|ABY30563.1| ribosomal protein S3 [Methylobacterium extorquens PA1] gi|218522703|gb|ACK83288.1| ribosomal protein S3 [Methylobacterium chloromethanicum CM4] gi|240008728|gb|ACS39954.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens AM1] gi|254268637|emb|CAX24596.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens DM4] Length = 248 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 134/224 (59%), Positives = 173/224 (77%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A+SI Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A T YG+CGIKV+V + E+ + D P A+ + + Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220 >gi|254282595|ref|ZP_04957563.1| ribosomal protein S3 [gamma proteobacterium NOR51-B] gi|219678798|gb|EED35147.1| ribosomal protein S3 [gamma proteobacterium NOR51-B] Length = 224 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 150/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLGV NS W+A Y L DL++REY+ L A V++++IER Sbjct: 1 MGQKVHPTGIRLGVVKDHNSVWYADSKNYAKNLISDLQVREYILKKLDAASVSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ARPG++IGKKG D+E +RK+LS +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AATARITIHTARPGIVIGKKGEDVEALRKELSAKMGVPVHINIEEIRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA+G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T AET YG G+KV++ + + D + Sbjct: 181 DIDYSTYEAETTYGIIGVKVWIFKGEVIGGDDDAPDTSRRTAAN 224 >gi|56477600|ref|YP_159189.1| 30S ribosomal protein S3 [Aromatoleum aromaticum EbN1] gi|81677438|sp|Q5P326|RS3_AZOSE RecName: Full=30S ribosomal protein S3 gi|56313643|emb|CAI08288.1| 30S ribosomal protein S3 [Aromatoleum aromaticum EbN1] Length = 278 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 118/226 (52%), Positives = 163/226 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V WNSRWFA +Y +LHEDLK+R++L+ L A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRDWNSRWFASSGDYSRMLHEDLKVRDFLKKRLAHASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++++L + +H+++ EV KPE++A LIA SI Sbjct: 61 AKNARITLFSARPGVVIGKKGEDIELLKRELQKIMGVPVHVNIEEVRKPEVDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG + A+T YG GIKV+V + + ++ + Sbjct: 181 DIDYGVSEAKTTYGIIGIKVWVYKGEMLGRNERPAVVENENEARRG 226 >gi|163796913|ref|ZP_02190870.1| 30S ribosomal protein S3 [alpha proteobacterium BAL199] gi|159177902|gb|EDP62451.1| 30S ribosomal protein S3 [alpha proteobacterium BAL199] Length = 227 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 133/226 (58%), Positives = 173/226 (76%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N TW+SRWFA Y ALLHEDL +R++LQ L+QAGV++I+IER Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFA-SKGYAALLHEDLVLRKFLQKRLRQAGVSRIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +Y+ARPG+IIGKKG DIEK+R++LS MT +++ L++ E+ KPEI+A L+A++I Sbjct: 60 AKRARITIYTARPGVIIGKKGADIEKLRQELSQMTRTDVALNIVEIRKPEIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRITCGGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+CG+KV+V + E+ D P A+ + + + Sbjct: 180 DIDYGDATAFTTYGTCGVKVWVF-KGEIMAHD---PMAQDKRLAEQ 221 >gi|108762029|ref|YP_631504.1| 30S ribosomal protein S3 [Myxococcus xanthus DK 1622] gi|122981077|sp|Q1D769|RS3_MYXXD RecName: Full=30S ribosomal protein S3 gi|108465909|gb|ABF91094.1| ribosomal protein S3 [Myxococcus xanthus DK 1622] Length = 220 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 112/221 (50%), Positives = 154/221 (69%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV TW+S+WF Y LHED++IRE+++ L AGV+K+ IER Sbjct: 1 MGQKVHPIGFRLGVIKTWDSKWF-EHKNYAQWLHEDIRIREFVKKSLNHAGVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V++ARPG++IGK+G IE ++K L T +E+ L++ EV K E +A L+A++I Sbjct: 60 ANKVKVNVHTARPGIVIGKRGAGIETVKKDLQQFTKNEVFLNIVEVRKAETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+A+Q+AM+FGA G++V SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKALQTAMKFGAKGIRVACSGRLGGAEMARYEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A+T YG G KV+V + + P +R Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWVCKGEVLPGKGGQAPMPSNR 220 >gi|126666807|ref|ZP_01737784.1| 30S ribosomal protein S3 [Marinobacter sp. ELB17] gi|126628852|gb|EAZ99472.1| 30S ribosomal protein S3 [Marinobacter sp. ELB17] Length = 227 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 109/213 (51%), Positives = 156/213 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI FRLGV NS W+A +Y L D+++RE+L L +A V+KI+IER Sbjct: 1 MGHKVNPIGFRLGVIKEHNSVWYADKKDYAKNLLNDIQVREFLDKRLVKASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++ Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDYGT A T YG G+KV++ + + + Sbjct: 181 DIDYGTYEAHTTYGVIGVKVWIFKGEILGGMEQ 213 >gi|307294980|ref|ZP_07574822.1| ribosomal protein S3 [Sphingobium chlorophenolicum L-1] gi|306879454|gb|EFN10672.1| ribosomal protein S3 [Sphingobium chlorophenolicum L-1] Length = 231 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 166/215 (77%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRWFA G++YG LL EDLKIR+Y+ +L QA ++K++IER Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGADYGRLLLEDLKIRQYIMKNLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+RKKL ++T+S++ L++ E+ KPE+++ L+AQ I Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGSLTSSDVSLNIVEIRKPEVDSKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214 >gi|170748642|ref|YP_001754902.1| ribosomal protein S3 [Methylobacterium radiotolerans JCM 2831] gi|170655164|gb|ACB24219.1| ribosomal protein S3 [Methylobacterium radiotolerans JCM 2831] Length = 248 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 132/224 (58%), Positives = 171/224 (76%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRWFA +Y L+HED+ IR L LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANKGDYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARQEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A T YG+CGIKV+V + E+ + D P A+ + + Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220 >gi|56461018|ref|YP_156299.1| ribosomal protein S3 [Idiomarina loihiensis L2TR] gi|61215389|sp|Q5QXY3|RS3_IDILO RecName: Full=30S ribosomal protein S3 gi|56180028|gb|AAV82750.1| Ribosomal protein S3 [Idiomarina loihiensis L2TR] Length = 226 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 161/226 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ WN+ W+A +E+ LH D ++R++L L+ A V++I+I+R Sbjct: 1 MGQKVHPNGIRLGISRPWNATWYANTNEFADNLHSDFQVRKFLNKELRNASVSRIVIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK++S +T + ++++EV KPE+++ L+A +I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRKQVSKLTGAPAQINISEVRKPELDSQLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+A+R GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + A R + Sbjct: 181 DIDYSTSEANTTYGIIGVKVWIFRGEVLGGLPTEEKPAPKRGKNRK 226 >gi|148260933|ref|YP_001235060.1| 30S ribosomal protein S3 [Acidiphilium cryptum JF-5] gi|326404331|ref|YP_004284413.1| 30S ribosomal protein S3 [Acidiphilium multivorum AIU301] gi|189044987|sp|A5FZV9|RS3_ACICJ RecName: Full=30S ribosomal protein S3 gi|146402614|gb|ABQ31141.1| SSU ribosomal protein S3P [Acidiphilium cryptum JF-5] gi|325051193|dbj|BAJ81531.1| 30S ribosomal protein S3 [Acidiphilium multivorum AIU301] Length = 225 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 128/227 (56%), Positives = 174/227 (76%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RLG+N TW+SRWFA G++Y +LLH+DLK+RE+L L AGV+K+LIER Sbjct: 1 MGHKVNPVGLRLGINRTWDSRWFA-GADYASLLHDDLKLREHLLGRLSGAGVSKVLIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGKKG DIE ++K+LS+M +++ L++ E+ KPEI+A L+AQ+I Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIEVLKKELSSMAKADVSLNIVEIRKPEIDAALVAQNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ID+G A A+T YG+CG+KV++ + E+ D P A+ R + + Sbjct: 180 DIDFGVATAKTTYGTCGVKVWIF-KGEIMAHD---PMAQDRRAAEQA 222 >gi|53803417|ref|YP_114782.1| 30S ribosomal protein S3 [Methylococcus capsulatus str. Bath] gi|61215439|sp|Q605B8|RS3_METCA RecName: Full=30S ribosomal protein S3 gi|53757178|gb|AAU91469.1| ribosomal protein S3 [Methylococcus capsulatus str. Bath] Length = 223 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 106/210 (50%), Positives = 148/210 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W+SRWFA Y L+ DLK+RE+L+ LK A V++I I R Sbjct: 1 MGQKVNPTGIRLGYIKDWSSRWFADSKSYPVFLNNDLKVREFLKQKLKHASVSRIQINRL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N +I +++ARPG++IGK+G DI+ +R+ +S + +SV E+ KPE++A L+A+ + Sbjct: 61 ANNAQITIHTARPGIVIGKRGEDIDALRRDVSRFMGVPVQVSVEEIRKPELDAQLVAEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRAVQ+ +R GA+G+K+ +GRLNGAE++RTE Y EGRVPL T RA Sbjct: 121 AQQLEKRIMFRRAMKRAVQNTLRVGAEGIKISVAGRLNGAEIARTEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A A T YG G+KV++ + Sbjct: 181 DIDYGFAEAVTTYGVIGVKVWIFKGEVFEP 210 >gi|192362436|ref|YP_001981214.1| 30S ribosomal protein S3 [Cellvibrio japonicus Ueda107] gi|190688601|gb|ACE86279.1| ribosomal protein S3 [Cellvibrio japonicus Ueda107] Length = 226 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 152/210 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A G++Y L+ DLK+R Y+Q L A V+++ IER Sbjct: 1 MGQKVHPNGIRLGIIKKHTSVWYADGTDYADKLNIDLKVRSYIQEKLASASVSRVDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ARPG++IGKKG D++K+R ++S +H+++ E+ KP+++A L+AQS+ Sbjct: 61 ANTARITIHTARPGIVIGKKGEDVDKLRAEISKQMGVPVHINIEEIRKPDLDAALVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRQGAEGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY TA A T YG G+KV++ + + D Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEVIGD 210 >gi|294010619|ref|YP_003544079.1| ribosomal protein S3 [Sphingobium japonicum UT26S] gi|292673949|dbj|BAI95467.1| ribosomal protein S3 [Sphingobium japonicum UT26S] Length = 231 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 165/215 (76%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRWFA G++YG LL EDLKIR+++ +L QA ++K++IER Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGADYGRLLLEDLKIRQFIMKNLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+RKKL +T+S++ L++ E+ KPEI++ L+AQ I Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGGLTSSDVSLNIVEIRKPEIDSKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214 >gi|71905967|ref|YP_283554.1| 30S ribosomal protein S3 [Dechloromonas aromatica RCB] gi|91207650|sp|Q47J97|RS3_DECAR RecName: Full=30S ribosomal protein S3 gi|71845588|gb|AAZ45084.1| SSU ribosomal protein S3P [Dechloromonas aromatica RCB] Length = 261 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 123/224 (54%), Positives = 163/224 (72%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A ++ +L+ED+K+REYL+ L A V ++LIER Sbjct: 1 MGQKIHPTGFRLAVTKNWSSRWYANSKDFPGMLNEDIKVREYLKRKLAHASVGRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ VYSARPG++IGKKG DIE++R L + +H+S+ E+ KPEI+A LIA SI Sbjct: 61 AKNARVTVYSARPGVVIGKKGEDIEQLRTDLQRIMGVPVHVSIEEIRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+KV+++GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKVMSAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV+V D + + P AE + Sbjct: 181 DIDYATSEALTTYGIIGIKVWVYKGDML--DRNEQPVAEEPAAD 222 >gi|90417575|ref|ZP_01225493.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2207] gi|90330596|gb|EAS45892.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2207] Length = 229 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 103/224 (45%), Positives = 152/224 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A +Y LH+DL +RE+++ L A V+++ IER Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYAGNKDYADKLHQDLTVREFIRKRLAHASVSRVDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R ++ N + +++ E+ KP+++A L+AQ++ Sbjct: 61 SDSARITIHTARPGIVIGKKGEDVEKLRNEIGNKMGCPVTINIEEIRKPDLDANLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA GVK+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRGGALGVKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY A T YG G+KV++ + + ++ A+ + Sbjct: 181 DIDYAAAEGNTTYGIIGVKVWIFKGEVLGGEEAEKAPAKKQDTR 224 >gi|77462265|ref|YP_351769.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides 2.4.1] gi|126461141|ref|YP_001042255.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides ATCC 17029] gi|221638119|ref|YP_002524381.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides KD131] gi|91207837|sp|Q3J5R6|RS3_RHOS4 RecName: Full=30S ribosomal protein S3 gi|152060900|sp|A3PGL7|RS3_RHOS1 RecName: Full=30S ribosomal protein S3 gi|254764543|sp|B9KL97|RS3_RHOSK RecName: Full=30S ribosomal protein S3 gi|77386683|gb|ABA77868.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides 2.4.1] gi|126102805|gb|ABN75483.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides ATCC 17029] gi|221158900|gb|ACL99879.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides KD131] Length = 238 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 130/226 (57%), Positives = 170/226 (75%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+RE++ + KQAGV+K++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMREFIHDYAKQAGVSKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ +++ARPG+IIGKKG DIE +RKKLS T SE+HL++ E+ KPE++A L+A+SI Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLSAFTKSELHLNIVEIRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ+ERRV FRRAMKR VQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQMERRVSFRRAMKRGVQNAMRIGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + E+ + D H ++ Sbjct: 181 DIDYATSEATTPYGIIGVKVWIF-KGEILEHDPQAHDRRHSEAQEG 225 >gi|240167709|ref|ZP_04746368.1| 30S ribosomal protein S3 [Mycobacterium kansasii ATCC 12478] Length = 277 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225 A IDYG A+T +G G+KV++ D V +PA R + Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAVPAGPERPRRE 228 >gi|332187763|ref|ZP_08389497.1| ribosomal protein S3 [Sphingomonas sp. S17] gi|332012113|gb|EGI54184.1| ribosomal protein S3 [Sphingomonas sp. S17] Length = 236 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL +N TW+SRWFA G +YG LL EDLKIR+Y+ L QA ++K++IER Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWFAEGHDYGRLLLEDLKIRQYIMKTLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI +++ARPG+IIGKKG DIEK+RKKL +MT+S++ L++ E+ KPEI+A L+AQ + Sbjct: 61 AKLCRISIFAARPGVIIGKKGADIEKLRKKLGSMTSSDVSLNIVEIRKPEIDAKLVAQGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMKRAVQSA+R GA+G+++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ADQLERRIAFRRAMKRAVQSALRLGAEGIRITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 ++DY A A TAYG CG+KV++ + E+ D P A+ R++ + Sbjct: 181 NVDYAEAQAHTAYGVCGVKVWIF-KGEILGHD---PMAQDRLMME 221 >gi|147676661|ref|YP_001210876.1| 30S ribosomal protein S3 [Pelotomaculum thermopropionicum SI] gi|189045026|sp|A5D5G1|RS3_PELTS RecName: Full=30S ribosomal protein S3 gi|146272758|dbj|BAF58507.1| ribosomal protein S3 [Pelotomaculum thermopropionicum SI] Length = 231 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 96/220 (43%), Positives = 152/220 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W +W+A Y ALLHED+KIR++++ L AG+++I IER Sbjct: 1 MGQKVNPKGLRIGIIRDWEGKWYADKRNYAALLHEDIKIRKFIKEKLFAAGISRIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G ++E +RK+L N+T ++ +++ E+ PE++A L+A+++ Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEIKVPELDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ V +M+ GA G+KV GRL GAE++RTE Y EG+VPL TLRA Sbjct: 121 AAQLEKRIAFRRAMKQVVSRSMKMGAKGIKVACGGRLAGAEIARTEWYSEGKVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV++ + + ++ + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYRGEVLPEAKTPAKTAAR 220 >gi|313903145|ref|ZP_07836539.1| SSU ribosomal protein S3P [Thermaerobacter subterraneus DSM 13965] gi|313466647|gb|EFR62167.1| SSU ribosomal protein S3P [Thermaerobacter subterraneus DSM 13965] Length = 226 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 104/220 (47%), Positives = 152/220 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FRLG+ W+SRW+AR E+ LL ED +IR Y++ L AG++++ IER Sbjct: 1 MGQKTHPKGFRLGIIRDWDSRWYARRQEFVDLLLEDQRIRRYIKKRLYDAGISRVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ +PG++IGK GT +E +R++L MT ++ ++V EV +PE++A L+A+SI Sbjct: 61 ANRIRLTIHAGKPGMVIGKGGTGVESLRQELERMTGRQVAINVVEVKEPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q++RRV +RRAMK+A+Q MR GA G K+ SGRL GAE+SR+E EG VPL TLRA Sbjct: 121 AAQIQRRVAWRRAMKQALQRTMRAGAKGCKIRVSGRLGGAEISRSEWTAEGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV+++ + + ++ AAE Sbjct: 181 DIDYGQAEAFTTYGQIGVKVWINRGEVLPEAKRPAEAAEQ 220 >gi|117927521|ref|YP_872072.1| 30S ribosomal protein S3 [Acidothermus cellulolyticus 11B] gi|152060838|sp|A0LRM6|RS3_ACIC1 RecName: Full=30S ribosomal protein S3 gi|117647984|gb|ABK52086.1| SSU ribosomal protein S3P [Acidothermus cellulolyticus 11B] Length = 341 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 103/225 (45%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ ++SRW+A Y + ED+ IR + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITTEFSSRWYAD-RMYRDYVKEDVAIRRMMTRGMERAGISRVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +TN ++ L++ EV PEI+A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRADLEKLTNKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL +RV FRRAM++A+QSA++ GA GV+V +GRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 AEQLSQRVSFRRAMRKALQSALKAGAKGVRVQVAGRLGGAEMSRTEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A T +G G+KV++ D V+ D RV ++ Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDVVAGRDHEAARVAARVQQR 224 >gi|220921905|ref|YP_002497206.1| ribosomal protein S3 [Methylobacterium nodulans ORS 2060] gi|219946511|gb|ACL56903.1| ribosomal protein S3 [Methylobacterium nodulans ORS 2060] Length = 251 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 132/223 (59%), Positives = 171/223 (76%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N TW+SRW+A EY L+HED+ IR+ L LKQA V+KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYANKGEYARLMHEDVAIRQALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 +DYGTA A T YG+CGIKV+V + E+ + D P A+ + Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKRA 219 >gi|261211145|ref|ZP_05925434.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC341] gi|262401877|ref|ZP_06078442.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC586] gi|260839646|gb|EEX66257.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC341] gi|262351849|gb|EEZ00980.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC586] Length = 234 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 153/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + + AAE + + Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 224 >gi|146278562|ref|YP_001168721.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides ATCC 17025] gi|189045323|sp|A4WVK2|RS3_RHOS5 RecName: Full=30S ribosomal protein S3 gi|145556803|gb|ABP71416.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides ATCC 17025] Length = 238 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 128/226 (56%), Positives = 170/226 (75%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+RE++ + KQAGV+K++IER Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMREFIHDYAKQAGVSKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H+ CR+ +++ARPG+IIGKKG DIE +RKKL+ T SE+HL++ E+ KPE++A L+A+SI Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLAAFTKSELHLNIVEIRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ+ERRV FRRAMKR VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQMERRVSFRRAMKRGVQNAMRIGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + E+ + D H ++ Sbjct: 181 DIDYATSEASTPYGIIGVKVWIF-KGEILEHDPQAHDRRHSEAQEG 225 >gi|218290000|ref|ZP_03494177.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius LAA1] gi|218239985|gb|EED07172.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius LAA1] Length = 226 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W ++W+A +Y LLHEDLKIR Y+ LK A + + IER Sbjct: 1 MGQKVNPIGLRIGIIRDWEAKWYANKKDYQVLLHEDLKIRNYVMQRLKDAAIGSVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T +H+S++E+ +P++ A L+A+SI Sbjct: 61 ANRINVTIHTAKPGMVIGKGGQEVDALRNELNKLTGKRVHISISEIKQPDLCAKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMK+A+Q +MR GA GV+V SGRL GAE++RTE Y+EG VPLQTLRA Sbjct: 121 AQQLERRVAFRRAMKQAIQRSMRAGAKGVRVQVSGRLGGAEIARTEGYVEGTVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A A T YG G+KV++ + + + A V+ Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEVLPKRKNVQAEAASEAVQGG 226 >gi|319944789|ref|ZP_08019053.1| 30S ribosomal protein S3 [Lautropia mirabilis ATCC 51599] gi|319742038|gb|EFV94461.1| 30S ribosomal protein S3 [Lautropia mirabilis ATCC 51599] Length = 282 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 164/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ L EDL++RE+L+ LK A V ++LIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYAGNKDFAGKLAEDLQVREFLKKRLKNASVGRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE+++ +L+ M +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIERLKVELTKMLGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +DYGT+ A+T YG G+KV+V D + ++ + + Sbjct: 181 DVDYGTSEAQTTYGIIGVKVWVYKGDTLGRGEAPETTEKEAAGNE 225 >gi|260427444|ref|ZP_05781423.1| ribosomal protein S3 [Citreicella sp. SE45] gi|260421936|gb|EEX15187.1| ribosomal protein S3 [Citreicella sp. SE45] Length = 236 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 131/225 (58%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL VN TW+SRW+A +YG LL ED+ IR+++ KQAGVA+++IER Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIAIRDFIHEECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ ++SARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHSARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDARLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG GIKV++ + E+ + D P+A R ++ Sbjct: 181 DIDYANVEATTPYGIIGIKVWIF-KGEIMEHD---PSARERKSQE 221 >gi|85713141|ref|ZP_01044173.1| Ribosomal protein S3 [Idiomarina baltica OS145] gi|85693011|gb|EAQ30977.1| Ribosomal protein S3 [Idiomarina baltica OS145] Length = 226 Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 160/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ WN+ W+A +E+ LH D ++R++L L+ A V++I+IER Sbjct: 1 MGQKVHPNGIRLGISRPWNATWYANTNEFADNLHSDHQVRKFLTKELRNASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R+++ +T + ++++EV KPE++A L+A +I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRQQVQKLTGAPSQINISEVRKPELDAQLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+A+R GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SGQLERRVMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + A R + Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFRGEVLGGLPTEEKPAPKRGKNRK 226 >gi|118579125|ref|YP_900375.1| 30S ribosomal protein S3 [Pelobacter propionicus DSM 2379] gi|152060889|sp|A1ALU7|RS3_PELPD RecName: Full=30S ribosomal protein S3 gi|118501835|gb|ABK98317.1| SSU ribosomal protein S3P [Pelobacter propionicus DSM 2379] Length = 210 Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 118/211 (55%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV +W+S+W+A ++Y LLHEDLKIR +L+ L +G++KI IER Sbjct: 1 MGQKVNPIGFRLGVIKSWDSKWYAE-ADYAKLLHEDLKIRAFLKKRLYSSGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+ARPGLIIGKKG+++E I+K+LSN+T+ EI +++ EV KPE++A L+A+++ Sbjct: 60 ANKTKINIYTARPGLIIGKKGSEVETIKKELSNLTSKEIFINIIEVRKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++V SA++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRIAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG GIKV + + + Sbjct: 180 DIDYGCAEAKTTYGLIGIKVLIFKGEVLPGH 210 >gi|295688912|ref|YP_003592605.1| 30S ribosomal protein S3 [Caulobacter segnis ATCC 21756] gi|295430815|gb|ADG09987.1| ribosomal protein S3 [Caulobacter segnis ATCC 21756] Length = 250 Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 128/226 (56%), Positives = 171/226 (75%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLGVN TW+SRWFA G++YG +LH+DL +R L+ L QAGV++I+IER Sbjct: 1 MGQKVNPVGLRLGVNRTWDSRWFADGAQYGKMLHQDLAVRAALKKRLYQAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CRI +Y+ARPG+IIGKKG DI+K+RK LS T E+HL++ E+ KPE +A L+A+SI Sbjct: 61 HKKCRITIYAARPGVIIGKKGADIDKLRKDLSVQTEGEVHLNIVEIRKPETDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 ID+G A A+T YG G+K ++ + EV + D A + R+ + Sbjct: 181 DIDFGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223 >gi|255263196|ref|ZP_05342538.1| ribosomal protein S3 [Thalassiobium sp. R2A62] gi|255105531|gb|EET48205.1| ribosomal protein S3 [Thalassiobium sp. R2A62] Length = 235 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 131/225 (58%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL++RE+++ QAGV++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLRMREFIKKECHQAGVSRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ V++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTVHTARPGVIIGKKGADIETLRKKLAAMTDSELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 DIDYAHVEALTAYGIIGIKTWIF-KGEIMEHD---PAARDRRQQE 221 >gi|319796211|ref|YP_004157851.1| ribosomal protein s3 [Variovorax paradoxus EPS] gi|315598674|gb|ADU39740.1| ribosomal protein S3 [Variovorax paradoxus EPS] Length = 304 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 120/219 (54%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A ++ +L ED+K+REYL+ LK A V++++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++++L + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A+T YG G+KV+V D + +D +PA E Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVE 217 >gi|15642585|ref|NP_232218.1| 30S ribosomal protein S3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730407|ref|ZP_01682752.1| ribosomal protein S3 [Vibrio cholerae V52] gi|147673134|ref|YP_001218084.1| 30S ribosomal protein S3 [Vibrio cholerae O395] gi|153217580|ref|ZP_01951261.1| ribosomal protein S3 [Vibrio cholerae 1587] gi|153827402|ref|ZP_01980069.1| ribosomal protein S3 [Vibrio cholerae MZO-2] gi|227082707|ref|YP_002811258.1| ribosomal protein S3 [Vibrio cholerae M66-2] gi|229507358|ref|ZP_04396863.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae BX 330286] gi|229509719|ref|ZP_04399200.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae B33] gi|229513513|ref|ZP_04402977.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TMA 21] gi|229516843|ref|ZP_04406289.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae RC9] gi|229521656|ref|ZP_04411074.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TM 11079-80] gi|229524571|ref|ZP_04413976.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae bv. albensis VL426] gi|229527480|ref|ZP_04416872.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae 12129(1)] gi|229606864|ref|YP_002877512.1| 30S ribosomal protein S3 [Vibrio cholerae MJ-1236] gi|254292184|ref|ZP_04962954.1| ribosomal protein S3 [Vibrio cholerae AM-19226] gi|254851130|ref|ZP_05240480.1| 30S ribosomal protein S3 [Vibrio cholerae MO10] gi|255744441|ref|ZP_05418393.1| SSU ribosomal protein S3p (S3e) [Vibrio cholera CIRS 101] gi|258622721|ref|ZP_05717739.1| 30S ribosomal protein S3 [Vibrio mimicus VM573] gi|258625746|ref|ZP_05720625.1| 30S ribosomal protein S3 [Vibrio mimicus VM603] gi|262166611|ref|ZP_06034348.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus VM223] gi|262170473|ref|ZP_06038151.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus MB-451] gi|297581432|ref|ZP_06943355.1| ribosomal protein S3 [Vibrio cholerae RC385] gi|27734537|sp|Q9KNZ0|RS3_VIBCH RecName: Full=30S ribosomal protein S3 gi|189045346|sp|A5F543|RS3_VIBC3 RecName: Full=30S ribosomal protein S3 gi|254764556|sp|C3LRQ2|RS3_VIBCM RecName: Full=30S ribosomal protein S3 gi|9657177|gb|AAF95731.1| ribosomal protein S3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121627841|gb|EAX60437.1| ribosomal protein S3 [Vibrio cholerae V52] gi|124113468|gb|EAY32288.1| ribosomal protein S3 [Vibrio cholerae 1587] gi|146315017|gb|ABQ19556.1| ribosomal protein S3 [Vibrio cholerae O395] gi|149738675|gb|EDM53017.1| ribosomal protein S3 [Vibrio cholerae MZO-2] gi|150421913|gb|EDN13890.1| ribosomal protein S3 [Vibrio cholerae AM-19226] gi|227010595|gb|ACP06807.1| ribosomal protein S3 [Vibrio cholerae M66-2] gi|227014479|gb|ACP10689.1| ribosomal protein S3 [Vibrio cholerae O395] gi|229335112|gb|EEO00597.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae 12129(1)] gi|229338152|gb|EEO03169.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae bv. albensis VL426] gi|229341250|gb|EEO06254.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TM 11079-80] gi|229345906|gb|EEO10878.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae RC9] gi|229349390|gb|EEO14346.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TMA 21] gi|229353193|gb|EEO18132.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae B33] gi|229354863|gb|EEO19784.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae BX 330286] gi|229369519|gb|ACQ59942.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae MJ-1236] gi|254846835|gb|EET25249.1| 30S ribosomal protein S3 [Vibrio cholerae MO10] gi|255737966|gb|EET93359.1| SSU ribosomal protein S3p (S3e) [Vibrio cholera CIRS 101] gi|258581984|gb|EEW06854.1| 30S ribosomal protein S3 [Vibrio mimicus VM603] gi|258584909|gb|EEW09640.1| 30S ribosomal protein S3 [Vibrio mimicus VM573] gi|261891549|gb|EEY37535.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus MB-451] gi|262026327|gb|EEY44995.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus VM223] gi|297534270|gb|EFH73108.1| ribosomal protein S3 [Vibrio cholerae RC385] gi|327485072|gb|AEA79479.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae LMA3894-4] Length = 233 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 153/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + + AAE + + Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 224 >gi|56551418|ref|YP_162257.1| 30S ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761066|ref|ZP_04759155.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752968|ref|YP_003225861.1| 30S ribosomal protein S3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|61215381|sp|Q5NQ59|RS3_ZYMMO RecName: Full=30S ribosomal protein S3 gi|56542992|gb|AAV89146.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374685|gb|EER64146.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552331|gb|ACV75277.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 231 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 129/218 (59%), Positives = 163/218 (74%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRWFA+G +YG LL ED+KIR+++ L QA ++K++IER Sbjct: 1 MGHKSNPIGMRLQINRTWDSRWFAQGGDYGQLLLEDIKIRKFIMKTLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI +Y+ARPG+IIGKKG DIEK+RKKL +MT S + L++ E+ KPEI+A L+AQ I Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRKKLDSMTESGVSLNIVEIRKPEIDAQLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKRAVQSA+R GA GV++ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAQGVRITCGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEIMAHDPLAQDR 217 >gi|317123091|ref|YP_004103094.1| 30S ribosomal protein S3P [Thermaerobacter marianensis DSM 12885] gi|315593071|gb|ADU52367.1| SSU ribosomal protein S3P [Thermaerobacter marianensis DSM 12885] Length = 226 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 104/220 (47%), Positives = 151/220 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FRLG+ W+SRW+AR E+ LL ED +IR +++ L AG++++ IER Sbjct: 1 MGQKTHPKGFRLGIIRDWDSRWYARRQEFVDLLLEDQRIRRHIKKRLYDAGISRVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ +PG++IGK GT +E +R+ L MT ++ ++V EV +PE++A L+A+SI Sbjct: 61 ANRVRITIHAGKPGMVIGKGGTGVEALRQDLERMTGRQVAINVVEVKEPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERR+ +RRAMK+A+Q AMR GA G K+ SGRL GAE+SR+E EG VPL TLRA Sbjct: 121 AAQIERRISWRRAMKQALQRAMRAGAKGCKIRVSGRLGGAEISRSEWTAEGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV+++ + + ++ AE Sbjct: 181 DIDYGQAEAFTTYGQIGVKVWINRGEVLPEAKREAAPAEQ 220 >gi|78221852|ref|YP_383599.1| 30S ribosomal protein S3 [Geobacter metallireducens GS-15] gi|91207656|sp|Q39Y00|RS3_GEOMG RecName: Full=30S ribosomal protein S3 gi|78193107|gb|ABB30874.1| SSU ribosomal protein S3P [Geobacter metallireducens GS-15] Length = 211 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 115/212 (54%), Positives = 161/212 (75%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+SRW+A ++Y LLHED+K+R +L+ L +GV+KI IER Sbjct: 1 MGQKVNPIGFRLGVIRTWDSRWYAE-ADYAKLLHEDIKLRNFLKKRLFNSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPGLIIGKKG ++E ++K+L+ +T+ EI+L++ EV KPE++A L+++++ Sbjct: 60 ASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVSENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V SA++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRVAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV + + + Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQK 211 >gi|329898716|ref|ZP_08272450.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC3088] gi|328920771|gb|EGG28227.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC3088] Length = 224 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 152/224 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ NS W+A Y L DL++R+Y++ L A V++ILIER Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYADSKNYARQLITDLEVRQYIEKVLDNASVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI + +ARPG++IGKKG D++K+RK LS +++++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARITISTARPGIVIGKKGEDVDKLRKDLSARMGVPVNINIEEIRKPDLDAKLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+A+R GA+GVK+ SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNALRQGAEGVKIQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T A T YG G+KV++ + + +S + Sbjct: 181 DIDYATYEASTTYGIIGVKVWIFKGEVIGGQESAQDGGKKPAAN 224 >gi|126739684|ref|ZP_01755376.1| 30S ribosomal protein S3 [Roseobacter sp. SK209-2-6] gi|126719330|gb|EBA16040.1| 30S ribosomal protein S3 [Roseobacter sp. SK209-2-6] Length = 236 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL VN TW+SRW+A ++G LL ED++IR++++ KQAGVA+++IER Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDFGDLLLEDIRIRDFIKTECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAAMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A T YG GIK ++ + E+ + D P A R ++ Sbjct: 181 DIDYAHSEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221 >gi|118616577|ref|YP_904909.1| 30S ribosomal protein S3 [Mycobacterium ulcerans Agy99] gi|183981059|ref|YP_001849350.1| 30S ribosomal protein S3, RpsC [Mycobacterium marinum M] gi|152060883|sp|A0PM69|RS3_MYCUA RecName: Full=30S ribosomal protein S3 gi|226697734|sp|B2HSN7|RS3_MYCMM RecName: Full=30S ribosomal protein S3 gi|118568687|gb|ABL03438.1| 30S ribosomal protein S3, RpsC [Mycobacterium ulcerans Agy99] gi|183174385|gb|ACC39495.1| 30S ribosomal protein S3, RpsC [Mycobacterium marinum M] Length = 275 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225 A IDYG A+T +G G+KV++ D V +PA R + Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAVPAGADRPRRE 228 >gi|239817867|ref|YP_002946777.1| 30S ribosomal protein S3 [Variovorax paradoxus S110] gi|239804444|gb|ACS21511.1| ribosomal protein S3 [Variovorax paradoxus S110] Length = 308 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 120/226 (53%), Positives = 166/226 (73%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A ++ +L ED+K+REYL+ LK A V++++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++++L + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGT+ A+T YG G+KV+V D + +D +PA E + + Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVETPRPDDE 224 >gi|171060663|ref|YP_001793012.1| 30S ribosomal protein S3 [Leptothrix cholodnii SP-6] gi|226697726|sp|B1Y8I1|RS3_LEPCP RecName: Full=30S ribosomal protein S3 gi|170778108|gb|ACB36247.1| ribosomal protein S3 [Leptothrix cholodnii SP-6] Length = 285 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 116/215 (53%), Positives = 163/215 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + +L ED+++RE+L+ LK A V+++ IER Sbjct: 1 MGQKIHPTGFRLPVTRNWSSRWYANNRNFAGMLAEDIEVREFLKKKLKNAAVSRVTIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++ +L+ M + +++ EV KPE++A LIA+SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKLELAKMLKVPVAVNIEEVRKPEVDAQLIAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYGTA A+T YG G+KV+V D +++ D+ + Sbjct: 181 DIDYGTAEAKTTYGVIGVKVWVYRGDRLANGDAPV 215 >gi|114766893|ref|ZP_01445815.1| 30S ribosomal protein S3 [Pelagibaca bermudensis HTCC2601] gi|114540939|gb|EAU43999.1| 30S ribosomal protein S3 [Roseovarius sp. HTCC2601] Length = 236 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 133/225 (59%), Positives = 170/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL VN TW+SRW+A +YG LL ED+ IRE++ KQAGVA+++IER Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIAIREFIHEECKQAGVARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ V++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTVHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDARLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG GIKV++ + E+ + D PAA R ++ Sbjct: 181 DIDYANVEATTPYGIIGIKVWIF-KGEIMEHD---PAARDRKSQE 221 >gi|91786173|ref|YP_547125.1| 30S ribosomal protein S3 [Polaromonas sp. JS666] gi|123165524|sp|Q12GW5|RS3_POLSJ RecName: Full=30S ribosomal protein S3 gi|91695398|gb|ABE42227.1| SSU ribosomal protein S3P [Polaromonas sp. JS666] Length = 301 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 120/226 (53%), Positives = 164/226 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+LS + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGT+ A+T YG G+KV+V D + +S + +++ Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRGESPGAKLDAAPSDEE 226 >gi|90020613|ref|YP_526440.1| 30S ribosomal protein S3 [Saccharophagus degradans 2-40] gi|123396486|sp|Q21M51|RS3_SACD2 RecName: Full=30S ribosomal protein S3 gi|89950213|gb|ABD80228.1| SSU ribosomal protein S3P [Saccharophagus degradans 2-40] Length = 224 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 154/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A +EY L++DL++R+Y+Q L A V++I IER Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYAGKAEYADKLNQDLQVRKYIQNALAHASVSRIDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IGKKG D+EK+R +L+ +H+++ E+ KP+++A L AQS+ Sbjct: 61 ANTARVTIHTARPGIVIGKKGEDVEKLRTELTKQMGVPVHINIEEIRKPDLDAALAAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA+GVKV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRTVQNAMRQGAEGVKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + + + + + + Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEIIGGIEEVEANQKKKGSK 224 >gi|300114730|ref|YP_003761305.1| 30S ribosomal protein S3 [Nitrosococcus watsonii C-113] gi|299540667|gb|ADJ28984.1| ribosomal protein S3 [Nitrosococcus watsonii C-113] Length = 223 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 108/216 (50%), Positives = 154/216 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ WNS+W+A ++ LL+ DL +R YL L A V+ I I+R Sbjct: 1 MGQKVHPIGIRLGIVKDWNSKWYADSGQFSELLNNDLAVRSYLTKKLSHALVSNIQIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++ Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSGMMGIPVHINIQEIRKPELDATLVAVNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A T YG G+KV++ + + + Sbjct: 181 DIDYGFAEARTTYGILGVKVWIFKGEVFEQPEPQVA 216 >gi|77165781|ref|YP_344306.1| 30S ribosomal protein S3 [Nitrosococcus oceani ATCC 19707] gi|254433894|ref|ZP_05047402.1| ribosomal protein S3 [Nitrosococcus oceani AFC27] gi|91207823|sp|Q3J8S0|RS3_NITOC RecName: Full=30S ribosomal protein S3 gi|76884095|gb|ABA58776.1| SSU ribosomal protein S3P [Nitrosococcus oceani ATCC 19707] gi|207090227|gb|EDZ67498.1| ribosomal protein S3 [Nitrosococcus oceani AFC27] Length = 223 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 108/217 (49%), Positives = 154/217 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS+W+A ++ LL+ DL +R YL L A V+ I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDWNSKWYADSGQFSELLNNDLAVRSYLAKKLSHALVSNIQIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++ Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSRMMGIPVHINIQEIRKPELDATLVAANV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARNEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDYG A A+T YG G+KV++ + + + A Sbjct: 181 DIDYGFAEAKTTYGILGVKVWIFKGEVFEQPEPQVAA 217 >gi|295401914|ref|ZP_06811877.1| ribosomal protein S3 [Geobacillus thermoglucosidasius C56-YS93] gi|312109267|ref|YP_003987583.1| ribosomal protein S3 [Geobacillus sp. Y4.1MC1] gi|294976044|gb|EFG51659.1| ribosomal protein S3 [Geobacillus thermoglucosidasius C56-YS93] gi|311214368|gb|ADP72972.1| ribosomal protein S3 [Geobacillus sp. Y4.1MC1] Length = 218 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 104/209 (49%), Positives = 152/209 (72%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W+SRW+A +Y LLHEDLKIREY+ L+ A V++I IER Sbjct: 1 MGQKVNPIGLRIGIIRDWDSRWYAE-KDYADLLHEDLKIREYINKRLQDAAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDY TA A+T YG G+KV++ + + Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLP 208 >gi|189424416|ref|YP_001951593.1| 30S ribosomal protein S3 [Geobacter lovleyi SZ] gi|226697717|sp|B3E7U1|RS3_GEOLS RecName: Full=30S ribosomal protein S3 gi|189420675|gb|ACD95073.1| ribosomal protein S3 [Geobacter lovleyi SZ] Length = 210 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 112/211 (53%), Positives = 160/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+S+W+A +++ LHEDLKIR++L+ L AG++KI IER Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-ADFAKNLHEDLKIRQFLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPGLIIGKKG ++E ++K L+ +T+ E+ +++NEV KPE++A L+A+++ Sbjct: 60 ANKTKINIHAARPGLIIGKKGAEVELLKKDLAAITSKEVFININEVRKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRIAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV + + + Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQ 210 >gi|88812751|ref|ZP_01127997.1| ribosomal protein S3 [Nitrococcus mobilis Nb-231] gi|88789989|gb|EAR21110.1| ribosomal protein S3 [Nitrococcus mobilis Nb-231] Length = 224 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 109/224 (48%), Positives = 158/224 (70%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P FRLG+ W S W+A + +G L+ DLK+R +++ L A ++KI IER Sbjct: 1 MGHKVHPTGFRLGITEEWRSMWYADSANFGDYLNTDLKVRNFIKHKLAHASISKIKIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN I +Y+ARPG++IGKKG DIE +R +L+ M + +H+++ E+ KPE++A L+A+++ Sbjct: 61 AKNALITIYTARPGIVIGKKGADIEALRVRLARMMDIPVHVNIEEIRKPELDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR G G+++ SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGGQGIRIQVSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A+T YG G+KV++ + + ++P + R Sbjct: 181 DIDYGLAHAKTTYGVIGVKVWIFKGEIL--DTDSVPGSTARKAR 222 >gi|121608249|ref|YP_996056.1| 30S ribosomal protein S3 [Verminephrobacter eiseniae EF01-2] gi|152060914|sp|A1WHD1|RS3_VEREI RecName: Full=30S ribosomal protein S3 gi|121552889|gb|ABM57038.1| SSU ribosomal protein S3P [Verminephrobacter eiseniae EF01-2] Length = 294 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 123/226 (54%), Positives = 167/226 (73%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYADNRDFAGMLAEDIKVREYLKTKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIESLKKELAVRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGT+ A+T YG G+KV+V D + +D +PA E +++ Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVETPRPDEE 224 >gi|88704370|ref|ZP_01102084.1| 30S ribosomal protein S3 [Congregibacter litoralis KT71] gi|88701421|gb|EAQ98526.1| 30S ribosomal protein S3 [Congregibacter litoralis KT71] Length = 222 Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 103/213 (48%), Positives = 150/213 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y L DL++R ++ L A V++++IER Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADRKNYAKQLVTDLQVRSLIEKKLDNASVSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D++K+RK+L+ +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDKLRKQLTKEMGVPVHINIEEIRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA+G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A T YG G+KV++ + + ++ Sbjct: 181 DIDYATYEAATTYGILGVKVWIFKGEVLGADEA 213 >gi|126728170|ref|ZP_01743986.1| 30S ribosomal protein S3 [Sagittula stellata E-37] gi|126711135|gb|EBA10185.1| 30S ribosomal protein S3 [Sagittula stellata E-37] Length = 240 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRW+A +YG LL EDL+IR+++ KQAG+A+++IER Sbjct: 1 MGNKTNPIGMRLQINRTWDSRWYADTKDYGDLLLEDLRIRDFIHTECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKK++NMT+SE+HL++ EV KPE++ATL+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIANMTDSELHLNIVEVRKPELDATLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYANIEATTPYGIIGIKVWIF-KGEIMEHD---PQARDRKSQE 221 >gi|134298099|ref|YP_001111595.1| 30S ribosomal protein S3 [Desulfotomaculum reducens MI-1] gi|189044975|sp|A4J117|RS3_DESRM RecName: Full=30S ribosomal protein S3 gi|134050799|gb|ABO48770.1| SSU ribosomal protein S3P [Desulfotomaculum reducens MI-1] Length = 221 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 151/216 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W +WFA Y LL ED+KIREY++ L QAG+++I IER Sbjct: 1 MGQKVNPKGLRVGIIKDWEGKWFADKRNYSNLLIEDVKIREYIKRKLYQAGISRIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G ++E +RK+L MT ++H+++ EV PE++A L+A++I Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVEALRKELEKMTAKQVHVNIVEVKTPEVDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ VQ ++R GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 121 ASQLEKRIAFRRAMKQTVQRSLRMGAKGIKIACSGRLAGAEIARTEWYSEGKVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A T YG G+KV++ + + ++ Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPEAKKPAA 216 >gi|148554268|ref|YP_001261850.1| 30S ribosomal protein S3 [Sphingomonas wittichii RW1] gi|189045373|sp|A5V5Z6|RS3_SPHWW RecName: Full=30S ribosomal protein S3 gi|148499458|gb|ABQ67712.1| SSU ribosomal protein S3P [Sphingomonas wittichii RW1] Length = 231 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 124/218 (56%), Positives = 166/218 (76%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL +N TW+SRW+A G++YG LL EDLKIR+++ + QA ++K++IER Sbjct: 1 MGQKSNPIGMRLQINRTWDSRWYADGADYGRLLLEDLKIRKHIMKAIPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI VY+ARPG+IIGKKG DIEK+R+ L MT+S++ L++ E+ KPEI++ L+AQ + Sbjct: 61 AKLCRISVYAARPGVIIGKKGADIEKLRRALGKMTSSDVSLNIVEIRKPEIDSKLVAQGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMKRAVQSA+R GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ADQLERRIAFRRAMKRAVQSALRLGAEGIRITCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 ++DY A A TAYG CGIKV++ + E+ D Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPLAQDR 217 >gi|124268621|ref|YP_001022625.1| 30S ribosomal protein S3 [Methylibium petroleiphilum PM1] gi|152060875|sp|A2SLF1|RS3_METPP RecName: Full=30S ribosomal protein S3 gi|124261396|gb|ABM96390.1| SSU ribosomal protein S3P [Methylibium petroleiphilum PM1] Length = 299 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 118/215 (54%), Positives = 162/215 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRL V W+SRW+A + +L EDLK+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPVGFRLPVTRNWSSRWYASNRNFATMLAEDLKVREYLKAKLKSAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++ +L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELTRRLGVPVAVNIEEVRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG + A+T YG G+KV+V D +++ ++ + Sbjct: 181 DIDYGFSEAKTTYGIIGVKVWVYRGDRLANGEAPV 215 >gi|34499635|ref|NP_903850.1| 30S ribosomal protein S3 [Chromobacterium violaceum ATCC 12472] gi|61215684|sp|Q7NQF8|RS3_CHRVO RecName: Full=30S ribosomal protein S3 gi|34105485|gb|AAQ61840.1| 30S ribosomal protein S3 [Chromobacterium violaceum ATCC 12472] Length = 233 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 111/227 (48%), Positives = 161/227 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL VN W+S+WFA + +L +D+++RE+L+ L A V ++ IER Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFASSQNFPEMLKQDIEVREFLKKRLGHASVGRVTIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE ++++L +H+++ EV KPE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKQELQKRLGVPVHVNIEEVRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRA+Q+AMR GA+G+K+++SGRLNG +++R+E Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRLGAEGIKIMSSGRLNGIDIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY T+ A+T YG GIKV+V + PAA + + K + Sbjct: 181 DVDYATSEAKTTYGIIGIKVWVYKGELKPGQVQATPAAPEKKMRKGA 227 >gi|323703542|ref|ZP_08115188.1| ribosomal protein S3 [Desulfotomaculum nigrificans DSM 574] gi|323531533|gb|EGB21426.1| ribosomal protein S3 [Desulfotomaculum nigrificans DSM 574] Length = 221 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 102/216 (47%), Positives = 151/216 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W +WFA Y LL ED+KIRE+++ L QAG+AKI IER Sbjct: 1 MGQKVNPKGLRIGIIKDWEGKWFADKRNYSNLLIEDVKIREFIKKKLYQAGIAKIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G ++E +RK+L MT ++++++ EV PEI+A L+A+++ Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVEALRKQLEKMTGKQVNVNIVEVKTPEIDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ VQ A+R GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 121 AAQLEKRIAFRRAMKQTVQRALRLGAKGIKIACSGRLAGAEIARTEWYSEGKVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A T YG G+KV++ + + ++ Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPEAKKPAA 216 >gi|152978147|ref|YP_001343776.1| 30S ribosomal protein S3 [Actinobacillus succinogenes 130Z] gi|189044986|sp|A6VLJ4|RS3_ACTSZ RecName: Full=30S ribosomal protein S3 gi|150839870|gb|ABR73841.1| ribosomal protein S3 [Actinobacillus succinogenes 130Z] Length = 235 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 151/230 (65%), Gaps = 6/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELMNASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + + PAA + Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 230 >gi|307823448|ref|ZP_07653677.1| ribosomal protein S3 [Methylobacter tundripaludum SV96] gi|307735433|gb|EFO06281.1| ribosomal protein S3 [Methylobacter tundripaludum SV96] Length = 223 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 106/223 (47%), Positives = 154/223 (69%), Gaps = 2/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNSRW+A +Y LH+DL +R+Y++ L A V++I I R Sbjct: 1 MGQKVHPTGIRLGIVKDWNSRWYASSQDYSVFLHQDLTVRDYIKKKLAHASVSRIQINRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N I +++ARPG++IGKKG DIE +R+ +S + + L+V E+ KPE++A L+A+ + Sbjct: 61 PNNAHITIHTARPGIVIGKKGEDIEALRQAVSKIMGIPVQLNVEEIRKPELDAQLVAEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+++RRAMKRAV + MR GA+G+K+ GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMYRRAMKRAVTNTMRLGAEGIKINVGGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE--VSDSDSTIPAAEHR 221 IDY TA A T YG GIKV++ + + ++I + + Sbjct: 181 DIDYATAEAHTTYGIIGIKVWIFKGEVFDMDAHIASINSESKK 223 >gi|68249379|ref|YP_248491.1| 30S ribosomal protein S3 [Haemophilus influenzae 86-028NP] gi|145628326|ref|ZP_01784127.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.1-21] gi|145630528|ref|ZP_01786308.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021] gi|145632137|ref|ZP_01787872.1| 30S ribosomal protein S3 [Haemophilus influenzae 3655] gi|145634806|ref|ZP_01790514.1| 30S ribosomal protein S3 [Haemophilus influenzae PittAA] gi|145636660|ref|ZP_01792327.1| 30S ribosomal protein S3 [Haemophilus influenzae PittHH] gi|145638417|ref|ZP_01794027.1| 30S ribosomal protein S3 [Haemophilus influenzae PittII] gi|145640878|ref|ZP_01796460.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021] gi|148826572|ref|YP_001291325.1| 30S ribosomal protein S3 [Haemophilus influenzae PittEE] gi|148827972|ref|YP_001292725.1| 30S ribosomal protein S3 [Haemophilus influenzae PittGG] gi|229844650|ref|ZP_04464789.1| 30S ribosomal protein S3 [Haemophilus influenzae 6P18H1] gi|229845833|ref|ZP_04465945.1| 30S ribosomal protein S3 [Haemophilus influenzae 7P49H1] gi|319897723|ref|YP_004135920.1| 30S ribosomal subunit protein s3 [Haemophilus influenzae F3031] gi|329122789|ref|ZP_08251361.1| 30S ribosomal protein S3 [Haemophilus aegyptius ATCC 11116] gi|81336194|sp|Q4QMB6|RS3_HAEI8 RecName: Full=30S ribosomal protein S3 gi|172048052|sp|A5UDU1|RS3_HAEIE RecName: Full=30S ribosomal protein S3 gi|172048056|sp|A5UHT6|RS3_HAEIG RecName: Full=30S ribosomal protein S3 gi|68057578|gb|AAX87831.1| 30S ribosomal protein S3 [Haemophilus influenzae 86-028NP] gi|144980101|gb|EDJ89760.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.1-21] gi|144983918|gb|EDJ91360.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021] gi|144987044|gb|EDJ93574.1| 30S ribosomal protein S3 [Haemophilus influenzae 3655] gi|145267972|gb|EDK07968.1| 30S ribosomal protein S3 [Haemophilus influenzae PittAA] gi|145270186|gb|EDK10122.1| 30S ribosomal protein S3 [Haemophilus influenzae PittHH] gi|145272746|gb|EDK12653.1| 30S ribosomal protein S3 [Haemophilus influenzae PittII] gi|145274392|gb|EDK14256.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.4-21] gi|148716732|gb|ABQ98942.1| 30S ribosomal protein S3 [Haemophilus influenzae PittEE] gi|148719214|gb|ABR00342.1| 30S ribosomal protein S3 [Haemophilus influenzae PittGG] gi|229810837|gb|EEP46554.1| 30S ribosomal protein S3 [Haemophilus influenzae 7P49H1] gi|229812364|gb|EEP48054.1| 30S ribosomal protein S3 [Haemophilus influenzae 6P18H1] gi|301169500|emb|CBW29101.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae 10810] gi|309751556|gb|ADO81540.1| 30S ribosomal protein S3 [Haemophilus influenzae R2866] gi|309973726|gb|ADO96927.1| 30S ribosomal protein S3 [Haemophilus influenzae R2846] gi|317433229|emb|CBY81604.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3031] gi|327472053|gb|EGF17491.1| 30S ribosomal protein S3 [Haemophilus aegyptius ATCC 11116] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + +E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224 >gi|293391701|ref|ZP_06636035.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952235|gb|EFE02354.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + PA + + + Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAALTQPEQQPADKPKKAPRG 231 >gi|254362068|ref|ZP_04978193.1| ribosomal protein S3 [Mannheimia haemolytica PHL213] gi|261493003|ref|ZP_05989545.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495177|ref|ZP_05991640.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093624|gb|EDN74589.1| ribosomal protein S3 [Mannheimia haemolytica PHL213] gi|261309153|gb|EEY10393.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311347|gb|EEY12508.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 109/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AM+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + PAA+ + + Sbjct: 181 DIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231 >gi|315633461|ref|ZP_07888751.1| 30S ribosomal protein S3 [Aggregatibacter segnis ATCC 33393] gi|315477503|gb|EFU68245.1| 30S ribosomal protein S3 [Aggregatibacter segnis ATCC 33393] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPADK 224 >gi|254463292|ref|ZP_05076708.1| ribosomal protein S3 [Rhodobacterales bacterium HTCC2083] gi|206679881|gb|EDZ44368.1| ribosomal protein S3 [Rhodobacteraceae bacterium HTCC2083] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL VN TW+SRW+A +YG LL EDL IR+++ KQAG+A+++IER Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADSKDYGNLLLEDLAIRDFVNKECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAKITDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY AETAYG GIK ++ + E+ + D P A R ++ Sbjct: 181 DIDYAHVEAETAYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221 >gi|148263146|ref|YP_001229852.1| 30S ribosomal protein S3 [Geobacter uraniireducens Rf4] gi|189045010|sp|A5GAX1|RS3_GEOUR RecName: Full=30S ribosomal protein S3 gi|146396646|gb|ABQ25279.1| SSU ribosomal protein S3P [Geobacter uraniireducens Rf4] Length = 210 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 116/211 (54%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRSFLKKRLYHSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A++I Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSGK 210 >gi|223041823|ref|ZP_03612013.1| 30S ribosomal protein S3 [Actinobacillus minor 202] gi|240947878|ref|ZP_04752318.1| 30S ribosomal protein S3 [Actinobacillus minor NM305] gi|223017392|gb|EEF15813.1| 30S ribosomal protein S3 [Actinobacillus minor 202] gi|240297840|gb|EER48276.1| 30S ribosomal protein S3 [Actinobacillus minor NM305] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 110/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AM+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMKLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + PAA+ + + Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231 >gi|16272724|ref|NP_438942.1| 30S ribosomal protein S3 [Haemophilus influenzae Rd KW20] gi|260579874|ref|ZP_05847704.1| ribosomal protein S3 [Haemophilus influenzae RdAW] gi|1173250|sp|P44372|RS3_HAEIN RecName: Full=30S ribosomal protein S3 gi|1573793|gb|AAC22442.1| ribosomal protein S3 (rpS3) [Haemophilus influenzae Rd KW20] gi|260093158|gb|EEW77091.1| ribosomal protein S3 [Haemophilus influenzae RdAW] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELASASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + +E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224 >gi|56418647|ref|YP_145965.1| 30S ribosomal protein S3 [Geobacillus kaustophilus HTA426] gi|261417613|ref|YP_003251295.1| 30S ribosomal protein S3 [Geobacillus sp. Y412MC61] gi|297528488|ref|YP_003669763.1| ribosomal protein S3 [Geobacillus sp. C56-T3] gi|319765271|ref|YP_004130772.1| ribosomal protein S3 [Geobacillus sp. Y412MC52] gi|61215363|sp|Q5L417|RS3_GEOKA RecName: Full=30S ribosomal protein S3 gi|56378489|dbj|BAD74397.1| 30S ribosomal protein S3 (BS2) [Geobacillus kaustophilus HTA426] gi|261374070|gb|ACX76813.1| ribosomal protein S3 [Geobacillus sp. Y412MC61] gi|297251740|gb|ADI25186.1| ribosomal protein S3 [Geobacillus sp. C56-T3] gi|317110137|gb|ADU92629.1| ribosomal protein S3 [Geobacillus sp. Y412MC52] Length = 218 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 153/219 (69%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W SRW+A +Y LLHEDLKIREY+ L+ A V+++ IER Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKIREYISKRLQDAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALAQLTGKRVHINIVEIKKPDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A+T YG G+KV++ + + + Sbjct: 180 DIDYGTAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218 >gi|319761144|ref|YP_004125081.1| ribosomal protein s3 [Alicycliphilus denitrificans BC] gi|330823002|ref|YP_004386305.1| 30S ribosomal protein S3 [Alicycliphilus denitrificans K601] gi|317115705|gb|ADU98193.1| ribosomal protein S3 [Alicycliphilus denitrificans BC] gi|329308374|gb|AEB82789.1| ribosomal protein S3 [Alicycliphilus denitrificans K601] Length = 290 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 121/224 (54%), Positives = 161/224 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLSVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYGT+ A+T YG G+KV+V D + D + E Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRGDLPVAETPRPDDE 224 >gi|221069444|ref|ZP_03545549.1| ribosomal protein S3 [Comamonas testosteroni KF-1] gi|264676448|ref|YP_003276354.1| ribosomal protein S3 [Comamonas testosteroni CNB-2] gi|299531230|ref|ZP_07044641.1| 30S ribosomal protein S3 [Comamonas testosteroni S44] gi|220714467|gb|EED69835.1| ribosomal protein S3 [Comamonas testosteroni KF-1] gi|262206960|gb|ACY31058.1| ribosomal protein S3 [Comamonas testosteroni CNB-2] gi|298720813|gb|EFI61759.1| 30S ribosomal protein S3 [Comamonas testosteroni S44] Length = 289 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 123/226 (54%), Positives = 166/226 (73%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A VA++LIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVARVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEALKKELAARLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG + A+T YG G+KV+V D + +D +PA E E + Sbjct: 181 DIDYGFSEAKTTYGIIGVKVWVYKGDTLGRND--LPAVETPRPEDE 224 >gi|85703995|ref|ZP_01035098.1| 30S ribosomal protein S3 [Roseovarius sp. 217] gi|149203518|ref|ZP_01880488.1| 30S ribosomal protein S3 [Roseovarius sp. TM1035] gi|85671315|gb|EAQ26173.1| 30S ribosomal protein S3 [Roseovarius sp. 217] gi|149143351|gb|EDM31390.1| 30S ribosomal protein S3 [Roseovarius sp. TM1035] Length = 235 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL +R+++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAMRKFIGEECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLAAMTASELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIKV++ + E+ + D P A R ++ Sbjct: 181 DIDYAPVEATTAYGIIGIKVWIF-KGEIMEHD---PGARDRKAQE 221 >gi|169630894|ref|YP_001704543.1| 30S ribosomal protein S3 [Mycobacterium abscessus ATCC 19977] gi|226697732|sp|B1MGE4|RS3_MYCA9 RecName: Full=30S ribosomal protein S3 gi|169242861|emb|CAM63889.1| 30S ribosomal protein S3 [Mycobacterium abscessus] Length = 277 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 104/218 (47%), Positives = 145/218 (66%), Gaps = 2/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+AK+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLATGLERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPEAEAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDYG A+T +G G+KV++ D V A Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAA 217 >gi|126724869|ref|ZP_01740712.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2150] gi|126706033|gb|EBA05123.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2150] Length = 235 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A ++ LL EDL +R+++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADSKDFSTLLLEDLAMRKFIGEECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+A++I Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLADMTDSELHLNIVEVRKPEMDAPLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A TAYG GIKV++ + E+ + D PAA R ++ Sbjct: 181 DIDYSHKEALTAYGIIGIKVWIF-KGEIMEHD---PAARDRRQQE 221 >gi|260581601|ref|ZP_05849398.1| ribosomal protein S3 [Haemophilus influenzae NT127] gi|260095194|gb|EEW79085.1| ribosomal protein S3 [Haemophilus influenzae NT127] Length = 235 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNTVSKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + +E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPTDK 224 >gi|120553658|ref|YP_958009.1| 30S ribosomal protein S3 [Marinobacter aquaeolei VT8] gi|152060872|sp|A1TYK3|RS3_MARAV RecName: Full=30S ribosomal protein S3 gi|120323507|gb|ABM17822.1| SSU ribosomal protein S3P [Marinobacter aquaeolei VT8] Length = 227 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 106/213 (49%), Positives = 153/213 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP RLGV NS W+A +Y L D+++RE+L L +A V+KI+IER Sbjct: 1 MGHKVNPTGIRLGVIKEHNSVWYADKKDYAKNLLNDIQVREFLDKRLVKASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++ Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A T YG G+KV++ + + + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGMEQ 213 >gi|114797822|ref|YP_761523.1| 30S ribosomal protein S3 [Hyphomonas neptunium ATCC 15444] gi|122942159|sp|Q0BYC0|RS3_HYPNA RecName: Full=30S ribosomal protein S3 gi|114737996|gb|ABI76121.1| ribosomal protein S3 [Hyphomonas neptunium ATCC 15444] Length = 245 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 131/224 (58%), Positives = 174/224 (77%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N T +SRW+A +++G LLHED+ IR+ ++ LKQAG++KI+IER Sbjct: 1 MGQKVNPIGLRLGINRTADSRWYADSADFGRLLHEDISIRKAIREKLKQAGISKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK C I +++ARPGL+IGKKG DIE +RK+L+ MT+ E+ +++ E+ KPEI+ATLIA I Sbjct: 61 HKKCLITIHTARPGLVIGKKGGDIEVLRKELAKMTSDEVRVNLVEIRKPEIDATLIADDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR FRRAMKR++QSAMR GA+GVKV+ SGRL GAE++RTE Y EG VPL TLRA Sbjct: 121 ARQLERRASFRRAMKRSIQSAMRLGAEGVKVVVSGRLGGAEIARTEKYAEGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYGTA A T YG G+KV+V + E+ + D P A+ + +E Sbjct: 181 DIDYGTAEATTTYGIIGVKVWVY-KGEILEHD---PMAQDKRLE 220 >gi|32035719|ref|ZP_00135600.1| COG0092: Ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209230|ref|YP_001054455.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae L20] gi|165977202|ref|YP_001652795.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303250018|ref|ZP_07336220.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253192|ref|ZP_07339341.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246695|ref|ZP_07528765.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248837|ref|ZP_07530850.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251064|ref|ZP_07532988.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253450|ref|ZP_07535321.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255680|ref|ZP_07537484.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257863|ref|ZP_07539620.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260132|ref|ZP_07541842.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262261|ref|ZP_07543910.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264470|ref|ZP_07546055.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|152060840|sp|A3N364|RS3_ACTP2 RecName: Full=30S ribosomal protein S3 gi|126098022|gb|ABN74850.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877303|gb|ABY70351.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302647874|gb|EFL78081.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651081|gb|EFL81235.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852395|gb|EFM84630.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854764|gb|EFM86954.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856894|gb|EFM89026.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859129|gb|EFM91171.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861357|gb|EFM93347.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863769|gb|EFM95695.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865778|gb|EFM97656.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868024|gb|EFM99851.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870167|gb|EFN01926.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 235 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + PAA+ + + Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231 >gi|86135769|ref|ZP_01054348.1| 30S ribosomal protein S3 [Roseobacter sp. MED193] gi|85826643|gb|EAQ46839.1| 30S ribosomal protein S3 [Roseobacter sp. MED193] Length = 236 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL +N TW+SRW+A ++G LL ED+K+R++++ KQAG+A+++IER Sbjct: 1 MGHKVNPVGMRLQINRTWDSRWYADTKDFGDLLLEDIKLRDFIKDECKQAGIARVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQSAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG GIK ++ + E+ + D P A R ++ Sbjct: 181 DIDYAHNEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221 >gi|294085964|ref|YP_003552724.1| 30S ribosomal protein S3 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665539|gb|ADE40640.1| ribosomal protein S3 [Candidatus Puniceispirillum marinum IMCC1322] Length = 231 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 131/227 (57%), Positives = 168/227 (74%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ PI R+G+N TW+SRW+A G YG LLHED+K+REYL LKQA +++++IER Sbjct: 1 MGQKVKPIGLRVGINRTWDSRWYA-GRNYGTLLHEDIKLREYLMERLKQAAISRVVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ RPGLIIGKKG DIEK+R LS E+ L++ EV KPEI+A L+A++I Sbjct: 60 AGRARVTIHAGRPGLIIGKKGQDIEKLRLDLSKRIGGEVSLNIVEVRKPEIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA GV++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLERRVGFRRAMKRAVQSAMRLGALGVRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DYG A A T YG+CGIKV+V + EV D A + R+ E+ + Sbjct: 180 EVDYGEATAFTTYGACGIKVWVF-KGEVMAHDPM--AQDKRLAEQQA 223 >gi|217967375|ref|YP_002352881.1| ribosomal protein S3 [Dictyoglomus turgidum DSM 6724] gi|226697701|sp|B8E1D9|RS3_DICTD RecName: Full=30S ribosomal protein S3 gi|217336474|gb|ACK42267.1| ribosomal protein S3 [Dictyoglomus turgidum DSM 6724] Length = 245 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FRLG+ W S W+A S+Y +LLHED IR Y++ + QAG++ I IER Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYIKKNYYQAGISLIEIERK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I +++ARPG++IG+ G++IE IRK L +TN + ++V EV PE++A L+A++ Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLVKLTNKSVFVNVQEVKNPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+E+R+ ++RAMK+A+ A+R GA GVKV+ SGRLNGAE++R+E + EGR+PLQTL Sbjct: 121 IATQIEKRINYKRAMKQAINRALRAGAKGVKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYG A A T G G+KV++ D I + V K Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEPIQELPEKAVPKK 227 >gi|221133620|ref|ZP_03559925.1| 30S ribosomal protein S3 [Glaciecola sp. HTCC2999] Length = 234 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 106/226 (46%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++Y L D ++R+YL LK A ++KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLFNDHQVRQYLTKQLKSASLSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ ++ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++ L+A SI Sbjct: 61 AKSIKVTIHTARPGVVIGKKGEDVEKLRNHVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL T RA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHR 221 IDY T+ A T YG G+KV++ + + PA + + Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFKGEVLGGLPLTQEQPAAPAPKKK 226 >gi|109896804|ref|YP_660059.1| 30S ribosomal protein S3 [Pseudoalteromonas atlantica T6c] gi|122972344|sp|Q15YN3|RS3_PSEA6 RecName: Full=30S ribosomal protein S3 gi|109699085|gb|ABG39005.1| SSU ribosomal protein S3P [Pseudoalteromonas atlantica T6c] gi|332172255|gb|AEE21509.1| ribosomal protein S3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 232 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 151/226 (66%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++Y L D ++R+YL LK A ++KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLFNDHQVRQYLTKALKTASLSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK +S + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKHVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL T RA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRIGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV--SDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + PA + Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFKGEVLGGLPLTQEQPAQPKKKGR 226 >gi|239825699|ref|YP_002948323.1| 30S ribosomal protein S3 [Geobacillus sp. WCH70] gi|259495250|sp|C5D3S3|RS3_GEOSW RecName: Full=30S ribosomal protein S3 gi|239805992|gb|ACS23057.1| ribosomal protein S3 [Geobacillus sp. WCH70] Length = 218 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 154/219 (70%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W+SRW+A +Y LLHEDLKIREY+ L+ A V++I IER Sbjct: 1 MGQKVNPVGLRIGIIRDWDSRWYAE-KDYADLLHEDLKIREYINKRLQDAAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + T + Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|49474398|ref|YP_032440.1| 30S ribosomal protein S3 [Bartonella quintana str. Toulouse] gi|61215534|sp|Q6FZC8|RS3_BARQU RecName: Full=30S ribosomal protein S3 gi|49239902|emb|CAF26300.1| 30s ribosomal protein s3 [Bartonella quintana str. Toulouse] Length = 236 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 145/224 (64%), Positives = 176/224 (78%), Gaps = 3/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLGVN TW+SRW+A EYG LLHEDL IR Y+ LKQA ++K++IER Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLSIRLYVLEELKQAAISKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +YSARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI Sbjct: 61 HKKCRVTIYSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIHKPEIDATIIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+ Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +DYGTA A+TAYG CG+KV+V + + A+E R VE Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVFKGEILEYDPI---ASERRSVE 221 >gi|119502930|ref|ZP_01625015.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2080] gi|119461276|gb|EAW42366.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2080] Length = 223 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 148/213 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ NS W+A Y L DL++R+Y+ L A V++++IER Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYADSKAYAKNLISDLEVRDYVLKKLDAASVSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ +++ARPG++IGKKG D+EK+R+ LS +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARLTIHTARPGIVIGKKGEDVEKLRRDLSAKMGVPVHINIEEIRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAQGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A T YG G+KV++ + + D Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGSEDE 213 >gi|261866789|ref|YP_003254711.1| 30S ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|2500396|sp|P55827|RS3_ACTAC RecName: Full=30S ribosomal protein S3 gi|1841328|dbj|BAA10953.1| ribosomal protein S3 [Actinobacillus actinomycetemcomitans] gi|261412121|gb|ACX81492.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 235 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPTDK 224 >gi|262273373|ref|ZP_06051187.1| SSU ribosomal protein S3p (S3e) [Grimontia hollisae CIP 101886] gi|262222351|gb|EEY73662.1| SSU ribosomal protein S3p (S3e) [Grimontia hollisae CIP 101886] Length = 229 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 154/226 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGICKPWNSTWFANSQDFADNLDGDFKVRQFLTKELSKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRARVAQLAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG GIKV++ + + P AE ++ Sbjct: 181 DIDYATSSAHTTYGVIGIKVWIFKGEVLGGMPVAEPQAEKPKKQRK 226 >gi|319775283|ref|YP_004137771.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3047] gi|317449874|emb|CBY86085.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3047] Length = 235 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 156/225 (69%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIASVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + +E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224 >gi|281602679|gb|ADA75663.1| 30S ribosomal protein S3 [Shigella flexneri 2002017] Length = 224 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY T+ A T YG G+KV++ + E+ + + E Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQPEK 219 >gi|309703726|emb|CBJ03067.1| 30S ribosomal subunit protein S3 [Escherichia coli ETEC H10407] Length = 232 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 114/230 (49%), Positives = 156/230 (67%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + K Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQRKG 230 >gi|186477582|ref|YP_001859052.1| 30S ribosomal protein S3 [Burkholderia phymatum STM815] gi|226697676|sp|B2JI60|RS3_BURP8 RecName: Full=30S ribosomal protein S3 gi|184194041|gb|ACC72006.1| ribosomal protein S3 [Burkholderia phymatum STM815] Length = 264 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229 >gi|254516917|ref|ZP_05128975.1| ribosomal protein S3 [gamma proteobacterium NOR5-3] gi|219674422|gb|EED30790.1| ribosomal protein S3 [gamma proteobacterium NOR5-3] Length = 222 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 105/213 (49%), Positives = 151/213 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A + Y L DL++R +++ L A V++I+IER Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADRNNYAKQLVNDLQVRSFIEKKLDNASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D++K+RK L+ +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDKLRKVLAEKMGVPVHINIEEIRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA+G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A T YG G+KV++ + + +S Sbjct: 181 DIDYATYEAATTYGILGVKVWIFKGEVLGADES 213 >gi|331699170|ref|YP_004335409.1| 30S ribosomal protein S3 [Pseudonocardia dioxanivorans CB1190] gi|326953859|gb|AEA27556.1| ribosomal protein S3 [Pseudonocardia dioxanivorans CB1190] Length = 271 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 103/221 (46%), Positives = 147/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED++IR L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVEIRRMLSKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNAESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPQVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A T +G G+KV++ D V +PAA Sbjct: 180 ADIDYGLFEARTTFGRIGVKVWIYKGDVVGGRREGVPAAAE 220 >gi|303256456|ref|ZP_07342470.1| ribosomal protein S3 [Burkholderiales bacterium 1_1_47] gi|331000650|ref|ZP_08324303.1| ribosomal protein S3 [Parasutterella excrementihominis YIT 11859] gi|302859947|gb|EFL83024.1| ribosomal protein S3 [Burkholderiales bacterium 1_1_47] gi|329570862|gb|EGG52573.1| ribosomal protein S3 [Parasutterella excrementihominis YIT 11859] Length = 264 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 120/225 (53%), Positives = 160/225 (71%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W SRW+A G ++ L EDLK+R+YL LK A V +ILIER Sbjct: 1 MGQKINPTGFRLPVTHDWTSRWYATGRDFARTLAEDLKVRDYLGKKLKNASVGRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++ +L + +H+++ E+ +P+++A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEVLKAELQKLMGVPVHVNIEEIRRPDLDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRQGALGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + A+T YG G+KV+V D + D A R + Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDN-TGKDVAAEAPAEREDRR 224 >gi|190151120|ref|YP_001969645.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189916251|gb|ACE62503.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 235 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEISGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + PAA+ + + Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231 >gi|85060250|ref|YP_455952.1| 30S ribosomal protein S3 [Sodalis glossinidius str. 'morsitans'] gi|123766382|sp|Q2NQM8|RS3_SODGM RecName: Full=30S ribosomal protein S3 gi|84780770|dbj|BAE75547.1| 30S ribosomal protein S3 [Sodalis glossinidius str. 'morsitans'] Length = 232 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 110/229 (48%), Positives = 159/229 (69%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++++IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELSKASVSRLVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|187476545|ref|YP_784569.1| 30S ribosomal protein S3 [Bordetella avium 197N] gi|123766202|sp|Q2L2C0|RS3_BORA1 RecName: Full=30S ribosomal protein S3 gi|115421131|emb|CAJ47615.1| 30S ribosomal protein S3 [Bordetella avium 197N] Length = 264 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 116/216 (53%), Positives = 162/216 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A ++G +L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYADDKDFGGMLAEDIRVREYLKKKLKSASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 +IDYGT+ A T YG GIKV+V D +++ + + Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPVE 216 >gi|295694843|ref|YP_003588081.1| ribosomal protein S3 [Bacillus tusciae DSM 2912] gi|295410445|gb|ADG04937.1| ribosomal protein S3 [Bacillus tusciae DSM 2912] Length = 226 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 152/227 (66%), Gaps = 7/227 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ R+G+ W S+W+A EYG LL ED+KIR+Y+ LK A V+ + IER Sbjct: 1 MGQKVSPVGLRIGIIRDWESKWYAGKKEYGKLLLEDVKIRDYIFKRLKDAAVSAVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I V++A+PG++IGK GT++E +R L++MT +H+++ EV PE++A L+A+++ Sbjct: 61 ANRVNITVHTAKPGMVIGKGGTEVEALRAALAHMTGKRVHINIAEVKNPELSAKLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+A+Q MR GA GVK+ SGRL GAE++RTE Y EG VPL TLRA Sbjct: 121 ASQLERRVAFRRAMKQAIQRTMRAGAKGVKIQVSGRLAGAEIARTEGYSEGTVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T YG G+KV++ + + P R EK S Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEIL-------PVKGDRNAEKSS 220 >gi|83648846|ref|YP_437281.1| 30S ribosomal protein S3 [Hahella chejuensis KCTC 2396] gi|123753505|sp|Q2S918|RS3_HAHCH RecName: Full=30S ribosomal protein S3 gi|83636889|gb|ABC32856.1| ribosomal protein S3 [Hahella chejuensis KCTC 2396] Length = 227 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 102/217 (47%), Positives = 151/217 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+ NS W+A Y L D+K+RE+L L++A V+K++IER Sbjct: 1 MGQKVNPVGIRLGIVKDHNSVWYADKKNYSDHLLTDIKVREFLMKKLEKASVSKVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D++++R+++ + +H+++ E+ KP+++A L+A + Sbjct: 61 PQNAKITIHTARPGIVIGKKGEDVDRLRQEVGELMKVPVHINIEEIRKPDLDAKLVASGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDY T A T YG G+KV++ + + + Sbjct: 181 DIDYATHEAHTTYGVIGVKVWIFKGEILGGIEQVRAE 217 >gi|251793833|ref|YP_003008565.1| 30S ribosomal protein S3 [Aggregatibacter aphrophilus NJ8700] gi|247535232|gb|ACS98478.1| ribosomal protein S3 [Aggregatibacter aphrophilus NJ8700] Length = 235 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFANNLEGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPADK 224 >gi|242237865|ref|YP_002986046.1| 30S ribosomal protein S3 [Dickeya dadantii Ech703] gi|242129922|gb|ACS84224.1| ribosomal protein S3 [Dickeya dadantii Ech703] Length = 233 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 160/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TWNS W+A E+ L D K+R+YL L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKTWNSTWYANTKEFADNLDSDFKVRQYLNKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|260914674|ref|ZP_05921140.1| 30S ribosomal protein S3 [Pasteurella dagmatis ATCC 43325] gi|260631273|gb|EEX49458.1| 30S ribosomal protein S3 [Pasteurella dagmatis ATCC 43325] Length = 235 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 113/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG GIKV++ + E+ + I E + EK Sbjct: 181 DIDYNTAEAHTTYGVIGIKVWIF-KGEILGGMAAIAQPEQQPAEK 224 >gi|169830442|ref|YP_001716424.1| ribosomal protein S3 [Candidatus Desulforudis audaxviator MP104C] gi|226697697|sp|B1I1J4|RS3_DESAP RecName: Full=30S ribosomal protein S3 gi|169637286|gb|ACA58792.1| ribosomal protein S3 [Candidatus Desulforudis audaxviator MP104C] Length = 218 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 154/211 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+++W+A ++ LL ED+KIR+Y++ L AG+++I IERT Sbjct: 1 MGQKVDPRGLRLGIVRDWDAKWYAGKKDFSNLLLEDVKIRDYIKSKLLAAGISRIHIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++A+PG++IG+ GT++E +RK+L +T +I +++ E+ PE++A L+A+++ Sbjct: 61 ANRVRIAIHTAKPGVVIGRGGTEVEVLRKELEKLTGRQISINIVEIKTPELDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+RRV FRRAMK+AV AM+ GA G+++ +GRL GAE++RTE Y EG+VPL TLRA Sbjct: 121 AAQLQRRVAFRRAMKQAVGRAMKLGAKGIRISVAGRLAGAEIARTEWYSEGKVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG + A+T YG G+KV++ + + + Sbjct: 181 DIDYGFSEAKTTYGKIGVKVWIYRGEILPER 211 >gi|219871736|ref|YP_002476111.1| 30S ribosomal protein S3 [Haemophilus parasuis SH0165] gi|219691940|gb|ACL33163.1| 30S ribosomal protein S3 [Haemophilus parasuis SH0165] Length = 234 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 112/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINISEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AAQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + V +S+ A + K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKPARKG 232 >gi|160895846|ref|YP_001561428.1| 30S ribosomal protein S3 [Delftia acidovorans SPH-1] gi|160361430|gb|ABX33043.1| ribosomal protein S3 [Delftia acidovorans SPH-1] Length = 290 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 117/219 (53%), Positives = 159/219 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG + A+T YG G+KV+V D + +D Sbjct: 181 DIDYGFSEAKTTYGVIGVKVWVYKGDTLGRNDLPAAETP 219 >gi|114319625|ref|YP_741308.1| 30S ribosomal protein S3 [Alkalilimnicola ehrlichii MLHE-1] gi|122312451|sp|Q0ABG9|RS3_ALHEH RecName: Full=30S ribosomal protein S3 gi|114226019|gb|ABI55818.1| SSU ribosomal protein S3P [Alkalilimnicola ehrlichii MLHE-1] Length = 226 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 108/219 (49%), Positives = 155/219 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P FRLGV W S W+A S +G L+ DL++R +++ L A V++I IER Sbjct: 1 MGHKVHPTGFRLGVTEDWRSMWYAGSSNFGEYLNTDLQVRNFIRKKLAHASVSRIRIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN + +++ARPG++IGKKG DI+++R +++ + +H+++ E+ KPE++A L+A+S+ Sbjct: 61 AKNALVTIHTARPGIVIGKKGEDIDRLRGEVARLMGVPVHINIEEIRKPELDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 +IDYG A A T YG G+KV+V + + E Sbjct: 181 NIDYGVAEAHTTYGVIGVKVWVFKGEIIDSDAQPAAGGE 219 >gi|319942179|ref|ZP_08016495.1| 30S ribosomal protein S3 [Sutterella wadsworthensis 3_1_45B] gi|319804232|gb|EFW01124.1| 30S ribosomal protein S3 [Sutterella wadsworthensis 3_1_45B] Length = 260 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 114/213 (53%), Positives = 153/213 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W SRW+A G +Y L EDLK+R +L L+ A VA++LIER Sbjct: 1 MGQKINPTGFRLPVTRNWTSRWYANGRDYPNTLQEDLKVRSFLLKKLRNASVARVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N RI ++++RPG++IGK+G DIE ++ ++ M +H+++ EV +PE++A LIA I Sbjct: 61 ANNARITIFTSRPGIVIGKQGADIEALKTEVQKMMGVPVHVNIEEVRRPELDAQLIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+RV+FRRAMKRA+Q+AMR GA G+KV +SGRLNGA+++R E Y EGRVPLQTLRA Sbjct: 121 TQQLEKRVMFRRAMKRAMQNAMRLGALGIKVQSSGRLNGADIARDEWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +IDY T+ A T YG G+KV+V D + Sbjct: 181 NIDYATSEAHTTYGVVGVKVWVYKGDNFGAEEP 213 >gi|159042844|ref|YP_001531638.1| 30S ribosomal protein S3 [Dinoroseobacter shibae DFL 12] gi|189044976|sp|A8LM60|RS3_DINSH RecName: Full=30S ribosomal protein S3 gi|157910604|gb|ABV92037.1| ribosomal protein S3 RpsC [Dinoroseobacter shibae DFL 12] Length = 240 Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE+++ KQAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFIKEECKQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRRKIAAMTDSELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+A+R GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAVRMGAQGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 ID+ A TAYG GIKV++ + E+ + D H +++ Sbjct: 181 DIDFANVEATTAYGIIGIKVWIF-KGEIMEHDPQARDRRHAELQE 224 >gi|322515629|ref|ZP_08068607.1| 30S ribosomal protein S3 [Actinobacillus ureae ATCC 25976] gi|322118280|gb|EFX90563.1| 30S ribosomal protein S3 [Actinobacillus ureae ATCC 25976] Length = 234 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 111/224 (49%), Positives = 153/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + + + I + + V+ Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEQQPAVQ 224 >gi|197117329|ref|YP_002137756.1| 30S ribosomal protein S3 [Geobacter bemidjiensis Bem] gi|322418370|ref|YP_004197593.1| 30S ribosomal protein S3 [Geobacter sp. M18] gi|226697716|sp|B5EFQ6|RS3_GEOBB RecName: Full=30S ribosomal protein S3 gi|197086689|gb|ACH37960.1| ribosomal protein S3 [Geobacter bemidjiensis Bem] gi|320124757|gb|ADW12317.1| ribosomal protein S3 [Geobacter sp. M18] Length = 211 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 114/212 (53%), Positives = 161/212 (75%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++ Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 AMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSAKK 211 >gi|325577133|ref|ZP_08147617.1| 30S ribosomal protein S3 [Haemophilus parainfluenzae ATCC 33392] gi|301155336|emb|CBW14802.1| 30S ribosomal subunit protein S3 [Haemophilus parainfluenzae T3T1] gi|325160715|gb|EGC72836.1| 30S ribosomal protein S3 [Haemophilus parainfluenzae ATCC 33392] Length = 235 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 114/225 (50%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVNPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLTKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + E+ + + +E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224 >gi|296131842|ref|YP_003639089.1| ribosomal protein S3 [Thermincola sp. JR] gi|296030420|gb|ADG81188.1| ribosomal protein S3 [Thermincola potens JR] Length = 220 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 153/218 (70%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W+++W+A +Y L ED+K+REY++ L AG+++I IER Sbjct: 1 MGQKVHPKGLRIGIIKDWDAKWYAE-KDYADFLLEDIKVREYVKKKLYAAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+++E +RK L MT ++ +++ EV PE++A L+A++I Sbjct: 60 ANRLKLTIHTAKPGIVIGRGGSEVEALRKSLEKMTGKQVSVNIVEVKVPELDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+AV MR GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AAQLERRVSFRRAMKQAVSRTMRMGAQGIKIACSGRLAGAEMARTEWYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A+T YG G+K ++ + + + +++ + Sbjct: 180 DIDYGFAEADTTYGKIGVKAWIYRGEVLPEVKTSVASE 217 >gi|254438563|ref|ZP_05052057.1| ribosomal protein S3 [Octadecabacter antarcticus 307] gi|254451173|ref|ZP_05064610.1| ribosomal protein S3 [Octadecabacter antarcticus 238] gi|198254009|gb|EDY78323.1| ribosomal protein S3 [Octadecabacter antarcticus 307] gi|198265579|gb|EDY89849.1| ribosomal protein S3 [Octadecabacter antarcticus 238] Length = 238 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDLKI+ +++ QAG+++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIKAFIKKECAQAGISRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAALTASELHLNILEVRKPELDAQLVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A+TAYG GIK ++ + E+ + D P+A R +++ Sbjct: 181 DIDYAHVEAQTAYGIIGIKTWIF-KGEIMEHD---PSAHDRKLQE 221 >gi|311693277|gb|ADP96150.1| 30S ribosomal protein S3 [marine bacterium HP15] Length = 227 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 107/213 (50%), Positives = 153/213 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP RLGV NS W+A EY L D+++RE+L L +A V+KI+IER Sbjct: 1 MGHKVNPTGIRLGVIKEHNSVWYADKKEYSKNLLNDIQVREFLDKRLVKASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++ Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A T YG G+KV++ + + + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGMEQ 213 >gi|317049834|ref|YP_004117482.1| 30S ribosomal protein S3 [Pantoea sp. At-9b] gi|316951451|gb|ADU70926.1| ribosomal protein S3 [Pantoea sp. At-9b] Length = 232 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 157/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++N+ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVANIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|251787977|ref|YP_003002698.1| 30S ribosomal protein S3 [Dickeya zeae Ech1591] gi|271502240|ref|YP_003335266.1| 30S ribosomal protein S3 [Dickeya dadantii Ech586] gi|307132833|ref|YP_003884849.1| 30S ribosomal subunit protein S3 [Dickeya dadantii 3937] gi|247536598|gb|ACT05219.1| ribosomal protein S3 [Dickeya zeae Ech1591] gi|270345795|gb|ACZ78560.1| ribosomal protein S3 [Dickeya dadantii Ech586] gi|306530362|gb|ADN00293.1| 30S ribosomal subunit protein S3 [Dickeya dadantii 3937] Length = 233 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 159/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TWNS W+A E+ L D K+R+YL L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKTWNSTWYANTKEFADNLDSDFKVRQYLNKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|15603274|ref|NP_246348.1| 30S ribosomal protein S3 [Pasteurella multocida subsp. multocida str. Pm70] gi|27734533|sp|Q9CL37|RS3_PASMU RecName: Full=30S ribosomal protein S3 gi|12721784|gb|AAK03493.1| RpS3 [Pasteurella multocida subsp. multocida str. Pm70] Length = 235 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG GIKV++ + E+ + I E + +K Sbjct: 181 DIDYNTAEAHTTYGVIGIKVWIF-KGEILGGMAAIAQPEQQPADK 224 >gi|300718699|ref|YP_003743502.1| 30S ribosomal protein S3 [Erwinia billingiae Eb661] gi|299064535|emb|CAX61655.1| 30S ribosomal protein S3 [Erwinia billingiae Eb661] Length = 232 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 159/230 (69%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKDS 227 IDY T+ A T YG G+KV++ + + + PAA+ + ++ S Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKS 230 >gi|311277731|ref|YP_003939962.1| ribosomal protein S3 [Enterobacter cloacae SCF1] gi|308746926|gb|ADO46678.1| ribosomal protein S3 [Enterobacter cloacae SCF1] Length = 232 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 113/229 (49%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|291619169|ref|YP_003521911.1| RpsC [Pantoea ananatis LMG 20103] gi|291154199|gb|ADD78783.1| RpsC [Pantoea ananatis LMG 20103] gi|327395499|dbj|BAK12921.1| 30S ribosomal protein S3 RpsC [Pantoea ananatis AJ13355] Length = 232 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVAKIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|33594485|ref|NP_882129.1| 30S ribosomal protein S3 [Bordetella pertussis Tohama I] gi|33594757|ref|NP_882400.1| 30S ribosomal protein S3 [Bordetella parapertussis 12822] gi|33599028|ref|NP_886588.1| 30S ribosomal protein S3 [Bordetella bronchiseptica RB50] gi|61215724|sp|Q7VTC7|RS3_BORPE RecName: Full=30S ribosomal protein S3 gi|61215729|sp|Q7W2F0|RS3_BORPA RecName: Full=30S ribosomal protein S3 gi|61215738|sp|Q7WRB9|RS3_BORBR RecName: Full=30S ribosomal protein S3 gi|33564561|emb|CAE43877.1| 30S ribosomal protein S3 [Bordetella pertussis Tohama I] gi|33564833|emb|CAE39776.1| 30S ribosomal protein S3 [Bordetella parapertussis] gi|33575074|emb|CAE30537.1| 30S ribosomal protein S3 [Bordetella bronchiseptica RB50] Length = 263 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 119/218 (54%), Positives = 161/218 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRWFA +G +L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWTSRWFADDKAFGTMLAEDIRVREYLKKKLKSASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIENLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYGT+ A T YG GIKV+V D +++ + AA Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPPEAA 218 >gi|87199276|ref|YP_496533.1| 30S ribosomal protein S3 [Novosphingobium aromaticivorans DSM 12444] gi|123749869|sp|Q2G8X4|RS3_NOVAD RecName: Full=30S ribosomal protein S3 gi|87134957|gb|ABD25699.1| SSU ribosomal protein S3P [Novosphingobium aromaticivorans DSM 12444] Length = 231 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 125/225 (55%), Positives = 166/225 (73%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRW+A G Y +L EDLKIR+Y+ +L QA ++K++IER Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWYAEGRNYAQMLEEDLKIRKYIVENLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+R KL+ MT S++ L++ E+ KPEI++ L+AQ + Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRSKLATMTGSDVKLNIVEIRKPEIDSKLVAQGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +IDY A A TAYG GIKV++ + E+ D P A+ R++ + Sbjct: 181 NIDYAEAEAHTAYGVIGIKVWIF-KGEILGHD---PMAQDRLMME 221 >gi|156932240|ref|YP_001436156.1| 30S ribosomal protein S3 [Cronobacter sakazakii ATCC BAA-894] gi|260599633|ref|YP_003212204.1| 30S ribosomal protein S3 [Cronobacter turicensis z3032] gi|189044981|sp|A7MPI5|RS3_ENTS8 RecName: Full=30S ribosomal protein S3 gi|156530494|gb|ABU75320.1| hypothetical protein ESA_00011 [Cronobacter sakazakii ATCC BAA-894] gi|260218810|emb|CBA34161.1| 30S ribosomal protein S3 [Cronobacter turicensis z3032] Length = 233 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLNKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|138893791|ref|YP_001124244.1| 30S ribosomal protein S3 [Geobacillus thermodenitrificans NG80-2] gi|196251018|ref|ZP_03149700.1| ribosomal protein S3 [Geobacillus sp. G11MC16] gi|152060863|sp|A4IJJ5|RS3_GEOTN RecName: Full=30S ribosomal protein S3 gi|134265304|gb|ABO65499.1| Ribosomal protein S3 [Geobacillus thermodenitrificans NG80-2] gi|196209490|gb|EDY04267.1| ribosomal protein S3 [Geobacillus sp. G11MC16] Length = 218 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 101/219 (46%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W SRW+A +Y LLHEDLK+REY+ L+ A V+++ IER Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKVREYINKRLQDAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALAQLTGKRVHINIVEIKKPDLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + + Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218 >gi|254483419|ref|ZP_05096648.1| ribosomal protein S3 [marine gamma proteobacterium HTCC2148] gi|214036293|gb|EEB76971.1| ribosomal protein S3 [marine gamma proteobacterium HTCC2148] Length = 223 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 152/219 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ NS W+A Y L DL++REY++ L+ A V++I+IER Sbjct: 1 MGQKVHPIGIRLGIVKEHNSIWYADSKNYAKQLINDLQVREYIEKALEHASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D++ +RK L+ +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDALRKILTEKMGVPVHINIEEIRKPDLDAKLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAQGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T A T YG G+KV++ + + ++ + Sbjct: 181 DIDYATYEAATTYGIIGVKVWIFKGEVIGADEAAEAPKK 219 >gi|322831078|ref|YP_004211105.1| ribosomal protein S3 [Rahnella sp. Y9602] gi|321166279|gb|ADW71978.1| ribosomal protein S3 [Rahnella sp. Y9602] Length = 232 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 110/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A ++ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKDFADNLDGDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|152972221|ref|YP_001337367.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|188535272|ref|YP_001909069.1| 30S ribosomal protein S3 [Erwinia tasmaniensis Et1/99] gi|206580744|ref|YP_002236287.1| ribosomal protein S3 [Klebsiella pneumoniae 342] gi|238896810|ref|YP_002921555.1| 30S ribosomal protein S3 [Klebsiella pneumoniae NTUH-K2044] gi|259909993|ref|YP_002650349.1| 30S ribosomal protein S3 [Erwinia pyrifoliae Ep1/96] gi|262045171|ref|ZP_06018198.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288933272|ref|YP_003437331.1| ribosomal protein S3 [Klebsiella variicola At-22] gi|290512075|ref|ZP_06551443.1| 30S ribosomal protein S3 [Klebsiella sp. 1_1_55] gi|292489843|ref|YP_003532733.1| 30S ribosomal protein S3 [Erwinia amylovora CFBP1430] gi|292900885|ref|YP_003540254.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC 49946] gi|330002288|ref|ZP_08304282.1| ribosomal protein S3 [Klebsiella sp. MS 92-3] gi|189045015|sp|A6TEW6|RS3_KLEP7 RecName: Full=30S ribosomal protein S3 gi|226697710|sp|B2VK58|RS3_ERWT9 RecName: Full=30S ribosomal protein S3 gi|226697722|sp|B5XNA0|RS3_KLEP3 RecName: Full=30S ribosomal protein S3 gi|150957070|gb|ABR79100.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|188030314|emb|CAO98203.1| 30S ribosomal protein S3 [Erwinia tasmaniensis Et1/99] gi|206569802|gb|ACI11578.1| ribosomal protein S3 [Klebsiella pneumoniae 342] gi|224965615|emb|CAX57147.1| 30S ribosomal protein S3 [Erwinia pyrifoliae Ep1/96] gi|238549137|dbj|BAH65488.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037491|gb|EEW38735.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|283480090|emb|CAY76006.1| 30S ribosomal protein S3 [Erwinia pyrifoliae DSM 12163] gi|288888001|gb|ADC56319.1| ribosomal protein S3 [Klebsiella variicola At-22] gi|289775865|gb|EFD83865.1| 30S ribosomal protein S3 [Klebsiella sp. 1_1_55] gi|291200733|emb|CBJ47866.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC 49946] gi|291555280|emb|CBA23577.1| 30S ribosomal protein S3 [Erwinia amylovora CFBP1430] gi|310765592|gb|ADP10542.1| 30S ribosomal protein S3 [Erwinia sp. Ejp617] gi|312174025|emb|CBX82278.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC BAA-2158] gi|328537361|gb|EGF63611.1| ribosomal protein S3 [Klebsiella sp. MS 92-3] Length = 232 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|167854927|ref|ZP_02477703.1| 30S ribosomal protein S3 [Haemophilus parasuis 29755] gi|167853994|gb|EDS25232.1| 30S ribosomal protein S3 [Haemophilus parasuis 29755] Length = 234 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 112/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLGGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINISEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AAQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + V +S+ A + K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKPARKG 232 >gi|227115266|ref|ZP_03828922.1| 30S ribosomal protein S3 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328943|ref|ZP_03832967.1| 30S ribosomal protein S3 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690177|ref|YP_003019367.1| ribosomal protein S3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261823226|ref|YP_003261332.1| 30S ribosomal protein S3 [Pectobacterium wasabiae WPP163] gi|259495254|sp|C6DG68|RS3_PECCP RecName: Full=30S ribosomal protein S3 gi|251756755|gb|ACT14831.1| ribosomal protein S3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|261607239|gb|ACX89725.1| ribosomal protein S3 [Pectobacterium wasabiae WPP163] Length = 233 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRKYLTKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|293393305|ref|ZP_06637619.1| 30S ribosomal protein S3 [Serratia odorifera DSM 4582] gi|291424215|gb|EFE97430.1| 30S ribosomal protein S3 [Serratia odorifera DSM 4582] Length = 232 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|82701906|ref|YP_411472.1| 30S ribosomal protein S3 [Nitrosospira multiformis ATCC 25196] gi|91207822|sp|Q2YAZ1|RS3_NITMU RecName: Full=30S ribosomal protein S3 gi|82409971|gb|ABB74080.1| SSU ribosomal protein S3P [Nitrosospira multiformis ATCC 25196] Length = 286 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 114/214 (53%), Positives = 158/214 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+S+W+A G + +L+ED+K+REYL+ L A V +++IER Sbjct: 1 MGQKIHPTGFRLSVLKNWSSKWYANGKSFPGMLNEDIKVREYLKKKLAHASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE +R L + +H+++ E+ KPEI+A LIA +I Sbjct: 61 SKNARITIYSSRPGVVIGKKGEDIEVLRGALQKLMGVPVHVNIEEIRKPEIDAQLIADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 +DYG + A+T YG GIKV+V + + + Sbjct: 181 DLDYGVSEAKTTYGVIGIKVWVFKGEVIGRGEQA 214 >gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] gi|16131193|ref|NP_417773.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12 substr. MG1655] gi|16762849|ref|NP_458466.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766723|ref|NP_462338.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|26249904|ref|NP_755944.1| 30S ribosomal protein S3 [Escherichia coli CFT073] gi|29144336|ref|NP_807678.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|30065385|ref|NP_839556.1| 30S ribosomal protein S3 [Shigella flexneri 2a str. 2457T] gi|56415353|ref|YP_152428.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181938|ref|YP_218355.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|74313833|ref|YP_312252.1| 30S ribosomal protein S3 [Shigella sonnei Ss046] gi|82545677|ref|YP_409624.1| 30S ribosomal protein S3 [Shigella boydii Sb227] gi|82778610|ref|YP_404959.1| 30S ribosomal protein S3 [Shigella dysenteriae Sd197] gi|89110696|ref|AP_004476.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12 substr. W3110] gi|91212747|ref|YP_542733.1| 30S ribosomal protein S3 [Escherichia coli UTI89] gi|110643553|ref|YP_671283.1| 30S ribosomal protein S3 [Escherichia coli 536] gi|110807162|ref|YP_690682.1| 30S ribosomal protein S3 [Shigella flexneri 5 str. 8401] gi|117625593|ref|YP_858916.1| 30S ribosomal protein S3 [Escherichia coli APEC O1] gi|146313379|ref|YP_001178453.1| 30S ribosomal protein S3 [Enterobacter sp. 638] gi|157148891|ref|YP_001456209.1| 30S ribosomal protein S3 [Citrobacter koseri ATCC BAA-895] gi|157157923|ref|YP_001464782.1| 30S ribosomal protein S3 [Escherichia coli E24377A] gi|157162788|ref|YP_001460106.1| 30S ribosomal protein S3 [Escherichia coli HS] gi|161506014|ref|YP_001573126.1| 30S ribosomal protein S3 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161616460|ref|YP_001590425.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168468007|ref|ZP_02701844.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168753080|ref|ZP_02778087.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4401] gi|168769178|ref|ZP_02794185.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4486] gi|168784357|ref|ZP_02809364.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4076] gi|170018450|ref|YP_001723404.1| 30S ribosomal protein S3 [Escherichia coli ATCC 8739] gi|170683377|ref|YP_001745576.1| 30S ribosomal protein S3 [Escherichia coli SMS-3-5] gi|170769550|ref|ZP_02904003.1| ribosomal protein S3 [Escherichia albertii TW07627] gi|187732278|ref|YP_001881998.1| 30S ribosomal protein S3 [Shigella boydii CDC 3083-94] gi|188492004|ref|ZP_02999274.1| ribosomal protein S3 [Escherichia coli 53638] gi|191174669|ref|ZP_03036144.1| ribosomal protein S3 [Escherichia coli F11] gi|194445051|ref|YP_002042684.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451812|ref|YP_002047457.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194737846|ref|YP_002116376.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195939863|ref|ZP_03085245.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. EC4024] gi|197249433|ref|YP_002148353.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264520|ref|ZP_03164594.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364283|ref|YP_002143920.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198242497|ref|YP_002217396.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388649|ref|ZP_03215261.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354938|ref|YP_002228739.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858676|ref|YP_002245327.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208806555|ref|ZP_03248892.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4206] gi|208811995|ref|ZP_03253324.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4045] gi|208821473|ref|ZP_03261793.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4042] gi|209400495|ref|YP_002272770.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4115] gi|209920780|ref|YP_002294864.1| 30S ribosomal protein S3 [Escherichia coli SE11] gi|213161928|ref|ZP_03347638.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213417257|ref|ZP_03350401.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425756|ref|ZP_03358506.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581214|ref|ZP_03363040.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612415|ref|ZP_03370241.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646530|ref|ZP_03376583.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|215488614|ref|YP_002331045.1| 30S ribosomal protein S3 [Escherichia coli O127:H6 str. E2348/69] gi|217324648|ref|ZP_03440732.1| ribosomal protein S3 [Escherichia coli O157:H7 str. TW14588] gi|218550589|ref|YP_002384380.1| 30S ribosomal protein S3 [Escherichia fergusonii ATCC 35469] gi|218555871|ref|YP_002388784.1| 30S ribosomal protein S3 [Escherichia coli IAI1] gi|218560375|ref|YP_002393288.1| 30S ribosomal protein S3 [Escherichia coli S88] gi|218691600|ref|YP_002399812.1| 30S ribosomal protein S3 [Escherichia coli ED1a] gi|218697006|ref|YP_002404673.1| 30S ribosomal protein S3 [Escherichia coli 55989] gi|218702076|ref|YP_002409705.1| 30S ribosomal protein S3 [Escherichia coli IAI39] gi|218706921|ref|YP_002414440.1| 30S ribosomal protein S3 [Escherichia coli UMN026] gi|224585229|ref|YP_002639028.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|227883445|ref|ZP_04001250.1| 30S ribosomal protein S3 [Escherichia coli 83972] gi|237703044|ref|ZP_04533525.1| 30S ribosomal subunit protein S3 [Escherichia sp. 3_2_53FAA] gi|237728649|ref|ZP_04559130.1| 30S ribosomal protein S3 [Citrobacter sp. 30_2] gi|238902405|ref|YP_002928201.1| 30S ribosomal subunit protein S3 [Escherichia coli BW2952] gi|238913851|ref|ZP_04657688.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|253771862|ref|YP_003034693.1| 30S ribosomal protein S3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038475|ref|ZP_04872531.1| 30S ribosomal subunit protein S3 [Escherichia sp. 1_1_43] gi|254163242|ref|YP_003046350.1| 30S ribosomal protein S3 [Escherichia coli B str. REL606] gi|254795251|ref|YP_003080088.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. TW14359] gi|256020673|ref|ZP_05434538.1| 30S ribosomal protein S3 [Shigella sp. D9] gi|256025958|ref|ZP_05439823.1| 30S ribosomal protein S3 [Escherichia sp. 4_1_40B] gi|260846112|ref|YP_003223890.1| 30S ribosomal subunit protein S3 [Escherichia coli O103:H2 str. 12009] gi|260857435|ref|YP_003231326.1| 30S ribosomal subunit protein S3 [Escherichia coli O26:H11 str. 11368] gi|260870057|ref|YP_003236459.1| 30S ribosomal subunit protein S3 [Escherichia coli O111:H- str. 11128] gi|261224619|ref|ZP_05938900.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str. FRIK2000] gi|261254487|ref|ZP_05947020.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str. FRIK966] gi|261342784|ref|ZP_05970642.1| ribosomal protein S3 [Enterobacter cancerogenus ATCC 35316] gi|283788050|ref|YP_003367915.1| 30S ribosomal subunit protein S3 [Citrobacter rodentium ICC168] gi|283835731|ref|ZP_06355472.1| hypothetical protein CIT292_10123 [Citrobacter youngae ATCC 29220] gi|291284672|ref|YP_003501490.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. CB9615] gi|293406911|ref|ZP_06650835.1| 30S ribosomal protein S3 [Escherichia coli FVEC1412] gi|293412733|ref|ZP_06655401.1| 30S ribosomal protein S3 [Escherichia coli B354] gi|293416731|ref|ZP_06659368.1| 30S ribosomal protein S3 [Escherichia coli B185] gi|293453632|ref|ZP_06664051.1| 30S ribosomal protein S3 [Escherichia coli B088] gi|296105022|ref|YP_003615168.1| 30S ribosomal protein S3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|297516602|ref|ZP_06934988.1| 30S ribosomal protein S3 [Escherichia coli OP50] gi|298382651|ref|ZP_06992246.1| 30S ribosomal protein S3 [Escherichia coli FVEC1302] gi|300815476|ref|ZP_07095701.1| ribosomal protein S3 [Escherichia coli MS 107-1] gi|300822883|ref|ZP_07103019.1| ribosomal protein S3 [Escherichia coli MS 119-7] gi|300896662|ref|ZP_07115178.1| ribosomal protein S3 [Escherichia coli MS 198-1] gi|300903562|ref|ZP_07121484.1| ribosomal protein S3 [Escherichia coli MS 84-1] gi|300918287|ref|ZP_07134891.1| ribosomal protein S3 [Escherichia coli MS 115-1] gi|300921877|ref|ZP_07138033.1| ribosomal protein S3 [Escherichia coli MS 182-1] gi|300932207|ref|ZP_07147486.1| ribosomal protein S3 [Escherichia coli MS 187-1] gi|300935312|ref|ZP_07150322.1| ribosomal protein S3 [Escherichia coli MS 21-1] gi|300946536|ref|ZP_07160801.1| ribosomal protein S3 [Escherichia coli MS 116-1] gi|300954811|ref|ZP_07167238.1| ribosomal protein S3 [Escherichia coli MS 175-1] gi|300973993|ref|ZP_07172400.1| ribosomal protein S3 [Escherichia coli MS 200-1] gi|300979885|ref|ZP_07174761.1| ribosomal protein S3 [Escherichia coli MS 45-1] gi|301018822|ref|ZP_07183066.1| ribosomal protein S3 [Escherichia coli MS 69-1] gi|301021136|ref|ZP_07185176.1| ribosomal protein S3 [Escherichia coli MS 196-1] gi|301046085|ref|ZP_07193263.1| ribosomal protein S3 [Escherichia coli MS 185-1] gi|301305523|ref|ZP_07211615.1| ribosomal protein S3 [Escherichia coli MS 124-1] gi|301325119|ref|ZP_07218653.1| ribosomal protein S3 [Escherichia coli MS 78-1] gi|301643866|ref|ZP_07243897.1| ribosomal protein S3 [Escherichia coli MS 146-1] gi|306816343|ref|ZP_07450481.1| 30S ribosomal protein S3 [Escherichia coli NC101] gi|307139997|ref|ZP_07499353.1| 30S ribosomal protein S3 [Escherichia coli H736] gi|307315107|ref|ZP_07594690.1| ribosomal protein S3 [Escherichia coli W] gi|309785636|ref|ZP_07680267.1| ribosomal protein S3 [Shigella dysenteriae 1617] gi|309794589|ref|ZP_07689011.1| ribosomal protein S3 [Escherichia coli MS 145-7] gi|312968361|ref|ZP_07782571.1| ribosomal protein S3 [Escherichia coli 2362-75] gi|312972425|ref|ZP_07786599.1| ribosomal protein S3 [Escherichia coli 1827-70] gi|331644010|ref|ZP_08345139.1| ribosomal protein S3 [Escherichia coli H736] gi|331649111|ref|ZP_08350197.1| ribosomal protein S3 [Escherichia coli M605] gi|331654907|ref|ZP_08355906.1| ribosomal protein S3 [Escherichia coli M718] gi|331659604|ref|ZP_08360542.1| ribosomal protein S3 [Escherichia coli TA206] gi|331664927|ref|ZP_08365828.1| ribosomal protein S3 [Escherichia coli TA143] gi|331670143|ref|ZP_08370982.1| ribosomal protein S3 [Escherichia coli TA271] gi|331674817|ref|ZP_08375574.1| ribosomal protein S3 [Escherichia coli TA280] gi|331679383|ref|ZP_08380053.1| ribosomal protein S3 [Escherichia coli H591] gi|331684956|ref|ZP_08385542.1| ribosomal protein S3 [Escherichia coli H299] gi|62287194|sp|Q5PIV8|RS3_SALPA RecName: Full=30S ribosomal protein S3 gi|62288973|sp|P0A7V3|RS3_ECOLI RecName: Full=30S ribosomal protein S3 gi|62288974|sp|P0A7V4|RS3_ECOL6 RecName: Full=30S ribosomal protein S3 gi|62288975|sp|P0A7V5|RS3_ECO57 RecName: Full=30S ribosomal protein S3 gi|62288976|sp|P0A7V6|RS3_SALTY RecName: Full=30S ribosomal protein S3 gi|62288977|sp|P0A7V7|RS3_SALTI RecName: Full=30S ribosomal protein S3 gi|75505516|sp|Q57J38|RS3_SALCH RecName: Full=30S ribosomal protein S3 gi|91207838|sp|Q31VW2|RS3_SHIBS RecName: Full=30S ribosomal protein S3 gi|91207839|sp|Q32B37|RS3_SHIDS RecName: Full=30S ribosomal protein S3 gi|91207840|sp|Q3YWU5|RS3_SHISS RecName: Full=30S ribosomal protein S3 gi|122366320|sp|Q0SZY8|RS3_SHIF8 RecName: Full=30S ribosomal protein S3 gi|122957942|sp|Q0TCE7|RS3_ECOL5 RecName: Full=30S ribosomal protein S3 gi|122990715|sp|Q1R612|RS3_ECOUT RecName: Full=30S ribosomal protein S3 gi|152060860|sp|A1AGK2|RS3_ECOK1 RecName: Full=30S ribosomal protein S3 gi|189044965|sp|A8AQL0|RS3_CITK8 RecName: Full=30S ribosomal protein S3 gi|189044977|sp|A7ZSK3|RS3_ECO24 RecName: Full=30S ribosomal protein S3 gi|189044978|sp|A8A5B9|RS3_ECOHS RecName: Full=30S ribosomal protein S3 gi|189044979|sp|B1IPY5|RS3_ECOLC RecName: Full=30S ribosomal protein S3 gi|189044980|sp|A4WFC2|RS3_ENT38 RecName: Full=30S ribosomal protein S3 gi|189045331|sp|A9MN54|RS3_SALAR RecName: Full=30S ribosomal protein S3 gi|189045332|sp|A9MSZ2|RS3_SALPB RecName: Full=30S ribosomal protein S3 gi|226697702|sp|B7MCS9|RS3_ECO45 RecName: Full=30S ribosomal protein S3 gi|226697703|sp|B5YTN5|RS3_ECO5E RecName: Full=30S ribosomal protein S3 gi|226697704|sp|B7NLN3|RS3_ECO7I RecName: Full=30S ribosomal protein S3 gi|226697705|sp|B7M1M8|RS3_ECO8A RecName: Full=30S ribosomal protein S3 gi|226697706|sp|B7NDT5|RS3_ECOLU RecName: Full=30S ribosomal protein S3 gi|226697707|sp|B6I228|RS3_ECOSE RecName: Full=30S ribosomal protein S3 gi|226697708|sp|B1LHC8|RS3_ECOSM RecName: Full=30S ribosomal protein S3 gi|226697711|sp|B7LRT0|RS3_ESCF3 RecName: Full=30S ribosomal protein S3 gi|226697752|sp|B5F7T9|RS3_SALA4 RecName: Full=30S ribosomal protein S3 gi|226697753|sp|B5FJK8|RS3_SALDC RecName: Full=30S ribosomal protein S3 gi|226697754|sp|B5R285|RS3_SALEP RecName: Full=30S ribosomal protein S3 gi|226697755|sp|B5RH21|RS3_SALG2 RecName: Full=30S ribosomal protein S3 gi|226697756|sp|B4TKK9|RS3_SALHS RecName: Full=30S ribosomal protein S3 gi|226697757|sp|B4SUT4|RS3_SALNS RecName: Full=30S ribosomal protein S3 gi|226697758|sp|B5BGY0|RS3_SALPK RecName: Full=30S ribosomal protein S3 gi|226697759|sp|B4TXD6|RS3_SALSV RecName: Full=30S ribosomal protein S3 gi|226697760|sp|B2U2T2|RS3_SHIB3 RecName: Full=30S ribosomal protein S3 gi|254764529|sp|B7UK38|RS3_ECO27 RecName: Full=30S ribosomal protein S3 gi|254764530|sp|B7L4K3|RS3_ECO55 RecName: Full=30S ribosomal protein S3 gi|254764531|sp|B7N198|RS3_ECO81 RecName: Full=30S ribosomal protein S3 gi|254764544|sp|C0Q0B0|RS3_SALPC RecName: Full=30S ribosomal protein S3 gi|259495244|sp|C4ZUG9|RS3_ECOBW RecName: Full=30S ribosomal protein S3 gi|25294476|pir||AG1006 30S ribosomal chain protein S3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|116666550|pdb|1VS5|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666602|pdb|1VS7|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032364|pdb|3E1A|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032421|pdb|3E1C|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097324|pdb|3I1M|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097376|pdb|3I1O|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097428|pdb|3I1Q|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097482|pdb|3I1S|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097536|pdb|3I1Z|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097591|pdb|3I21|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560309|pdb|3KC4|C Chain C, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|308198689|pdb|3OR9|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198710|pdb|3ORA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634281|pdb|3IZV|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634306|pdb|3IZW|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|26110332|gb|AAN82518.1|AE016767_278 30S ribosomal protein S3 [Escherichia coli CFT073] gi|42832|emb|CAA26466.1| unnamed protein product [Escherichia coli] gi|606248|gb|AAA58111.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12 substr. MG1655] gi|1789710|gb|AAC76339.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12 substr. MG1655] gi|13363652|dbj|BAB37602.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str. Sakai] gi|16421991|gb|AAL22297.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16505155|emb|CAD08179.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139974|gb|AAO71538.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|30043647|gb|AAP19367.1| 30S ribosomal subunit protein S3 [Shigella flexneri 2a str. 2457T] gi|56129610|gb|AAV79116.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129571|gb|AAX67274.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|73857310|gb|AAZ90017.1| 30S ribosomal subunit protein S3 [Shigella sonnei Ss046] gi|81242758|gb|ABB63468.1| 30S ribosomal subunit protein S3 [Shigella dysenteriae Sd197] gi|81247088|gb|ABB67796.1| 30S ribosomal subunit protein S3 [Shigella boydii Sb227] gi|85676727|dbj|BAE77977.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K12 substr. W3110] gi|91074321|gb|ABE09202.1| 30S ribosomal subunit protein S3 [Escherichia coli UTI89] gi|110345145|gb|ABG71382.1| 30S ribosomal protein S3 [Escherichia coli 536] gi|110616710|gb|ABF05377.1| 30S ribosomal subunit protein S3 [Shigella flexneri 5 str. 8401] gi|115514717|gb|ABJ02792.1| 30S ribosomal subunit protein S3 [Escherichia coli APEC O1] gi|145320255|gb|ABP62402.1| SSU ribosomal protein S3P [Enterobacter sp. 638] gi|157068468|gb|ABV07723.1| ribosomal protein S3 [Escherichia coli HS] gi|157079953|gb|ABV19661.1| ribosomal protein S3 [Escherichia coli E24377A] gi|157086096|gb|ABV15774.1| hypothetical protein CKO_04729 [Citrobacter koseri ATCC BAA-895] gi|160867361|gb|ABX23984.1| hypothetical protein SARI_04195 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161365824|gb|ABX69592.1| hypothetical protein SPAB_04275 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|169753378|gb|ACA76077.1| ribosomal protein S3 [Escherichia coli ATCC 8739] gi|170121607|gb|EDS90538.1| ribosomal protein S3 [Escherichia albertii TW07627] gi|170521095|gb|ACB19273.1| ribosomal protein S3 [Escherichia coli SMS-3-5] gi|187429270|gb|ACD08544.1| ribosomal protein S3 [Shigella boydii CDC 3083-94] gi|188487203|gb|EDU62306.1| ribosomal protein S3 [Escherichia coli 53638] gi|188998459|gb|EDU67457.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4076] gi|189358885|gb|EDU77304.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4401] gi|189361723|gb|EDU80142.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4486] gi|190905052|gb|EDV64716.1| ribosomal protein S3 [Escherichia coli F11] gi|194403714|gb|ACF63936.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194410116|gb|ACF70335.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713348|gb|ACF92569.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628911|gb|EDX48321.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095760|emb|CAR61330.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213136|gb|ACH50533.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242775|gb|EDY25395.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937013|gb|ACH74346.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605747|gb|EDZ04292.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274719|emb|CAR39775.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710479|emb|CAR34837.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|208726356|gb|EDZ75957.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4206] gi|208733272|gb|EDZ81959.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4045] gi|208741596|gb|EDZ89278.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4042] gi|209161895|gb|ACI39328.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4115] gi|209757098|gb|ACI76861.1| 30S ribosomal subunit protein S3 [Escherichia coli] gi|209757100|gb|ACI76862.1| 30S ribosomal subunit protein S3 [Escherichia coli] gi|209757102|gb|ACI76863.1| 30S ribosomal subunit protein S3 [Escherichia coli] gi|209757104|gb|ACI76864.1| 30S ribosomal subunit protein S3 [Escherichia coli] gi|209757106|gb|ACI76865.1| 30S ribosomal subunit protein S3 [Escherichia coli] gi|209914039|dbj|BAG79113.1| 30S ribosomal protein S3 [Escherichia coli SE11] gi|215266686|emb|CAS11125.1| 30S ribosomal subunit protein S3 [Escherichia coli O127:H6 str. E2348/69] gi|217320869|gb|EEC29293.1| ribosomal protein S3 [Escherichia coli O157:H7 str. TW14588] gi|218353738|emb|CAV00027.1| 30S ribosomal subunit protein S3 [Escherichia coli 55989] gi|218358130|emb|CAQ90777.1| 30S ribosomal subunit protein S3 [Escherichia fergusonii ATCC 35469] gi|218362639|emb|CAR00265.1| 30S ribosomal subunit protein S3 [Escherichia coli IAI1] gi|218367144|emb|CAR04918.1| 30S ribosomal subunit protein S3 [Escherichia coli S88] gi|218372062|emb|CAR19922.1| 30S ribosomal subunit protein S3 [Escherichia coli IAI39] gi|218429164|emb|CAR10116.2| 30S ribosomal subunit protein S3 [Escherichia coli ED1a] gi|218434018|emb|CAR14935.1| 30S ribosomal subunit protein S3 [Escherichia coli UMN026] gi|222035023|emb|CAP77766.1| 30S ribosomal protein S3 [Escherichia coli LF82] gi|224469757|gb|ACN47587.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|226838981|gb|EEH71004.1| 30S ribosomal subunit protein S3 [Escherichia sp. 1_1_43] gi|226902308|gb|EEH88567.1| 30S ribosomal subunit protein S3 [Escherichia sp. 3_2_53FAA] gi|226909271|gb|EEH95189.1| 30S ribosomal protein S3 [Citrobacter sp. 30_2] gi|227839589|gb|EEJ50055.1| 30S ribosomal protein S3 [Escherichia coli 83972] gi|238859798|gb|ACR61796.1| 30S ribosomal subunit protein S3 [Escherichia coli BW2952] gi|242378841|emb|CAQ33633.1| 30S ribosomal subunit protein S3, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322906|gb|ACT27508.1| ribosomal protein S3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975143|gb|ACT40814.1| 30S ribosomal protein S3 [Escherichia coli B str. REL606] gi|253979299|gb|ACT44969.1| 30S ribosomal protein S3 [Escherichia coli BL21(DE3)] gi|254594651|gb|ACT74012.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str. TW14359] gi|257756084|dbj|BAI27586.1| 30S ribosomal subunit protein S3 [Escherichia coli O26:H11 str. 11368] gi|257761259|dbj|BAI32756.1| 30S ribosomal subunit protein S3 [Escherichia coli O103:H2 str. 12009] gi|257766413|dbj|BAI37908.1| 30S ribosomal subunit protein S3 [Escherichia coli O111:H- str. 11128] gi|260447667|gb|ACX38089.1| ribosomal protein S3 [Escherichia coli DH1] gi|261248590|emb|CBG26428.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995643|gb|ACY90528.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|281180349|dbj|BAI56679.1| 30S ribosomal protein S3 [Escherichia coli SE15] gi|282951504|emb|CBG91203.1| 30S ribosomal subunit protein S3 [Citrobacter rodentium ICC168] gi|284923320|emb|CBG36414.1| 30S ribosomal subunit protein S3 [Escherichia coli 042] gi|288314962|gb|EFC53900.1| ribosomal protein S3 [Enterobacter cancerogenus ATCC 35316] gi|290764545|gb|ADD58506.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. CB9615] gi|291068410|gb|EFE06519.1| ribosomal protein S3 [Citrobacter youngae ATCC 29220] gi|291321758|gb|EFE61189.1| 30S ribosomal protein S3 [Escherichia coli B088] gi|291425722|gb|EFE98756.1| 30S ribosomal protein S3 [Escherichia coli FVEC1412] gi|291431307|gb|EFF04292.1| 30S ribosomal protein S3 [Escherichia coli B185] gi|291468380|gb|EFF10873.1| 30S ribosomal protein S3 [Escherichia coli B354] gi|294489965|gb|ADE88721.1| ribosomal protein S3 [Escherichia coli IHE3034] gi|295059481|gb|ADF64219.1| 30S ribosomal protein S3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295096955|emb|CBK86045.1| SSU ribosomal protein S3P [Enterobacter cloacae subsp. cloacae NCTC 9394] gi|298276487|gb|EFI18005.1| 30S ribosomal protein S3 [Escherichia coli FVEC1302] gi|299881666|gb|EFI89877.1| ribosomal protein S3 [Escherichia coli MS 196-1] gi|300301911|gb|EFJ58296.1| ribosomal protein S3 [Escherichia coli MS 185-1] gi|300309003|gb|EFJ63523.1| ribosomal protein S3 [Escherichia coli MS 200-1] gi|300318240|gb|EFJ68024.1| ribosomal protein S3 [Escherichia coli MS 175-1] gi|300359493|gb|EFJ75363.1| ribosomal protein S3 [Escherichia coli MS 198-1] gi|300399532|gb|EFJ83070.1| ribosomal protein S3 [Escherichia coli MS 69-1] gi|300404435|gb|EFJ87973.1| ribosomal protein S3 [Escherichia coli MS 84-1] gi|300409396|gb|EFJ92934.1| ribosomal protein S3 [Escherichia coli MS 45-1] gi|300414548|gb|EFJ97858.1| ribosomal protein S3 [Escherichia coli MS 115-1] gi|300421725|gb|EFK05036.1| ribosomal protein S3 [Escherichia coli MS 182-1] gi|300453782|gb|EFK17402.1| ribosomal protein S3 [Escherichia coli MS 116-1] gi|300459468|gb|EFK22961.1| ribosomal protein S3 [Escherichia coli MS 21-1] gi|300460031|gb|EFK23524.1| ribosomal protein S3 [Escherichia coli MS 187-1] gi|300524649|gb|EFK45718.1| ribosomal protein S3 [Escherichia coli MS 119-7] gi|300532368|gb|EFK53430.1| ribosomal protein S3 [Escherichia coli MS 107-1] gi|300839218|gb|EFK66978.1| ribosomal protein S3 [Escherichia coli MS 124-1] gi|300847998|gb|EFK75758.1| ribosomal protein S3 [Escherichia coli MS 78-1] gi|301077769|gb|EFK92575.1| ribosomal protein S3 [Escherichia coli MS 146-1] gi|301159977|emb|CBW19496.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|305850739|gb|EFM51196.1| 30S ribosomal protein S3 [Escherichia coli NC101] gi|306905456|gb|EFN35991.1| ribosomal protein S3 [Escherichia coli W] gi|307555402|gb|ADN48177.1| 30S ribosomal protein S3 [Escherichia coli ABU 83972] gi|307628349|gb|ADN72653.1| 30S ribosomal protein S3 [Escherichia coli UM146] gi|308121639|gb|EFO58901.1| ribosomal protein S3 [Escherichia coli MS 145-7] gi|308926756|gb|EFP72232.1| ribosomal protein S3 [Shigella dysenteriae 1617] gi|310334802|gb|EFQ01007.1| ribosomal protein S3 [Escherichia coli 1827-70] gi|312287186|gb|EFR15096.1| ribosomal protein S3 [Escherichia coli 2362-75] gi|312914457|dbj|BAJ38431.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|312947865|gb|ADR28692.1| 30S ribosomal protein S3 [Escherichia coli O83:H1 str. NRG 857C] gi|313647376|gb|EFS11828.1| ribosomal protein S3 [Shigella flexneri 2a str. 2457T] gi|315062606|gb|ADT76933.1| 30S ribosomal subunit protein S3 [Escherichia coli W] gi|315137889|dbj|BAJ45048.1| 30S ribosomal protein S3 [Escherichia coli DH1] gi|315255897|gb|EFU35865.1| ribosomal protein S3 [Escherichia coli MS 85-1] gi|315284611|gb|EFU44056.1| ribosomal protein S3 [Escherichia coli MS 110-3] gi|315292369|gb|EFU51721.1| ribosomal protein S3 [Escherichia coli MS 153-1] gi|315298612|gb|EFU57867.1| ribosomal protein S3 [Escherichia coli MS 16-3] gi|315616991|gb|EFU97603.1| ribosomal protein S3 [Escherichia coli 3431] gi|320087879|emb|CBY97642.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|320180148|gb|EFW55087.1| SSU ribosomal protein S3p (S3e) [Shigella boydii ATCC 9905] gi|320187032|gb|EFW61744.1| SSU ribosomal protein S3p (S3e) [Shigella flexneri CDC 796-83] gi|320191655|gb|EFW66305.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str. EC1212] gi|320199498|gb|EFW74088.1| SSU ribosomal protein S3p (S3e) [Escherichia coli EC4100B] gi|320639619|gb|EFX09213.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. G5101] gi|320645117|gb|EFX14133.1| 30S ribosomal protein S3 [Escherichia coli O157:H- str. 493-89] gi|320650428|gb|EFX18894.1| 30S ribosomal protein S3 [Escherichia coli O157:H- str. H 2687] gi|320655953|gb|EFX23873.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661405|gb|EFX28820.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. USDA 5905] gi|320666427|gb|EFX33410.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. LSU-61] gi|321226481|gb|EFX51531.1| SSU ribosomal protein S3p (S3e) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615025|gb|EFY11949.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617312|gb|EFY14213.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625534|gb|EFY22359.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626376|gb|EFY23185.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632112|gb|EFY28865.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635009|gb|EFY31732.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643290|gb|EFY39857.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646626|gb|EFY43133.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649972|gb|EFY46391.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652689|gb|EFY49029.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659554|gb|EFY55798.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665504|gb|EFY61691.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670398|gb|EFY66537.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670471|gb|EFY66605.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675047|gb|EFY71130.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681584|gb|EFY77613.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685928|gb|EFY81917.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716425|gb|EFZ07996.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131792|gb|ADX19222.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323154152|gb|EFZ40355.1| ribosomal protein S3 [Escherichia coli EPECa14] gi|323162993|gb|EFZ48828.1| ribosomal protein S3 [Escherichia coli E128010] gi|323164878|gb|EFZ50669.1| ribosomal protein S3 [Shigella sonnei 53G] gi|323173950|gb|EFZ59578.1| ribosomal protein S3 [Escherichia coli LT-68] gi|323179150|gb|EFZ64724.1| ribosomal protein S3 [Escherichia coli 1180] gi|323182792|gb|EFZ68193.1| ribosomal protein S3 [Escherichia coli 1357] gi|323189081|gb|EFZ74365.1| ribosomal protein S3 [Escherichia coli RN587/1] gi|323194036|gb|EFZ79236.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196446|gb|EFZ81597.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202315|gb|EFZ87360.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207336|gb|EFZ92286.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211228|gb|EFZ96073.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216063|gb|EGA00794.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223446|gb|EGA07774.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226824|gb|EGA11014.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231814|gb|EGA15924.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233233|gb|EGA17328.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237300|gb|EGA21365.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245535|gb|EGA29534.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249041|gb|EGA32963.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250664|gb|EGA34545.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256893|gb|EGA40607.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263042|gb|EGA46589.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266042|gb|EGA49537.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272799|gb|EGA56202.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|323376807|gb|ADX49075.1| ribosomal protein S3 [Escherichia coli KO11] gi|323934488|gb|EGB30896.1| ribosomal protein S3 [Escherichia coli E1520] gi|323939264|gb|EGB35476.1| ribosomal protein S3 [Escherichia coli E482] gi|323944265|gb|EGB40341.1| ribosomal protein S3 [Escherichia coli H120] gi|323950228|gb|EGB46110.1| ribosomal protein S3 [Escherichia coli H252] gi|323954563|gb|EGB50346.1| ribosomal protein S3 [Escherichia coli H263] gi|323959535|gb|EGB55188.1| ribosomal protein S3 [Escherichia coli H489] gi|323966276|gb|EGB61711.1| ribosomal protein S3 [Escherichia coli M863] gi|323970118|gb|EGB65392.1| ribosomal protein S3 [Escherichia coli TA007] gi|323974733|gb|EGB69846.1| ribosomal protein S3 [Escherichia coli TW10509] gi|324009005|gb|EGB78224.1| ribosomal protein S3 [Escherichia coli MS 57-2] gi|324014930|gb|EGB84149.1| ribosomal protein S3 [Escherichia coli MS 60-1] gi|324017868|gb|EGB87087.1| ribosomal protein S3 [Escherichia coli MS 117-3] gi|324111993|gb|EGC05972.1| ribosomal protein S3 [Escherichia fergusonii B253] gi|324116296|gb|EGC10216.1| ribosomal protein S3 [Escherichia coli E1167] gi|325498880|gb|EGC96739.1| 30S ribosomal protein S3 [Escherichia fergusonii ECD227] gi|326342559|gb|EGD66333.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str. 1044] gi|326344546|gb|EGD68295.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str. 1125] gi|326625177|gb|EGE31522.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630087|gb|EGE36430.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|327250962|gb|EGE62655.1| ribosomal protein S3 [Escherichia coli STEC_7v] gi|330909356|gb|EGH37870.1| SSU ribosomal protein S3p (S3e) [Escherichia coli AA86] gi|331036304|gb|EGI08530.1| ribosomal protein S3 [Escherichia coli H736] gi|331041609|gb|EGI13753.1| ribosomal protein S3 [Escherichia coli M605] gi|331046922|gb|EGI19000.1| ribosomal protein S3 [Escherichia coli M718] gi|331052819|gb|EGI24852.1| ribosomal protein S3 [Escherichia coli TA206] gi|331057437|gb|EGI29423.1| ribosomal protein S3 [Escherichia coli TA143] gi|331062205|gb|EGI34125.1| ribosomal protein S3 [Escherichia coli TA271] gi|331067726|gb|EGI39124.1| ribosomal protein S3 [Escherichia coli TA280] gi|331072555|gb|EGI43880.1| ribosomal protein S3 [Escherichia coli H591] gi|331077327|gb|EGI48539.1| ribosomal protein S3 [Escherichia coli H299] gi|332085465|gb|EGI90631.1| ribosomal protein S3 [Shigella boydii 5216-82] gi|332086053|gb|EGI91217.1| ribosomal protein S3 [Shigella dysenteriae 155-74] gi|332090373|gb|EGI95471.1| ribosomal protein S3 [Shigella boydii 3594-74] gi|332104221|gb|EGJ07567.1| 30S ribosomal protein S3 [Shigella sp. D9] Length = 233 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|220930971|ref|YP_002507879.1| ribosomal protein S3 [Halothermothrix orenii H 168] gi|254764533|sp|B8D0D0|RS3_HALOH RecName: Full=30S ribosomal protein S3 gi|219992281|gb|ACL68884.1| ribosomal protein S3 [Halothermothrix orenii H 168] Length = 214 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 101/214 (47%), Positives = 153/214 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + Y LL EDLKIR +++ + AG+++I+IER Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKNNYADLLQEDLKIRNHVKNKMYDAGISRIVIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ VY+ARPG++IG+ G++++ +RK + MT + ++V EV PE++A L+A++I Sbjct: 61 ANRLKLDVYTARPGMVIGRGGSEVDALRKDIEQMTGKNVQINVVEVEDPELDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+A+ AMR GA+G KV +SGRL GAE++RTE Y +GRVPL TLRA Sbjct: 121 AAQLERRISFRRAMKQAMNRAMRMGAEGFKVQSSGRLGGAEMARTEGYSDGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A T YG G+KV+++ + + + + Sbjct: 181 DIDYGFAEAYTTYGKIGVKVWINKGEVLPEVEDK 214 >gi|326315230|ref|YP_004232902.1| 30S ribosomal protein S3 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372066|gb|ADX44335.1| ribosomal protein S3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 293 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 120/218 (55%), Positives = 163/218 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYGT+ A+T YG G+KV+V D + +D + Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPVAET 218 >gi|238754181|ref|ZP_04615539.1| 30S ribosomal protein S3 [Yersinia ruckeri ATCC 29473] gi|238707677|gb|EEQ00037.1| 30S ribosomal protein S3 [Yersinia ruckeri ATCC 29473] Length = 232 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELVKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|253701916|ref|YP_003023105.1| 30S ribosomal protein S3 [Geobacter sp. M21] gi|259495249|sp|C6E4Q1|RS3_GEOSM RecName: Full=30S ribosomal protein S3 gi|251776766|gb|ACT19347.1| ribosomal protein S3 [Geobacter sp. M21] Length = 211 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 114/212 (53%), Positives = 160/212 (75%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPGLIIGKKG+++E ++K+L+ +T E++L++ EV KPE++A L+A+++ Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTEKEVYLNIQEVRKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 AMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSAKK 211 >gi|161510956|ref|YP_089234.2| 30S ribosomal protein S3 [Mannheimia succiniciproducens MBEL55E] gi|61215475|sp|Q65QW1|RS3_MANSM RecName: Full=30S ribosomal protein S3 Length = 235 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 6/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W+S WFA ++ + L D K+R++L L A V++I IER Sbjct: 1 MGQKVNPHGIRLGIVKPWSSTWFANTQDFASNLDGDFKVRKFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + PAA + Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 230 >gi|213861394|ref|ZP_03385864.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 220 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY T+ A T YG G+KV++ + E+ + + E Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQPEK 219 >gi|310817003|ref|YP_003964967.1| 30S ribosomal protein S3 [Ketogulonicigenium vulgare Y25] gi|308755738|gb|ADO43667.1| 30S ribosomal protein S3 [Ketogulonicigenium vulgare Y25] Length = 238 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RL VN TW+SRW+A +YG LL EDLKI+++++ KQAG++ ++IER Sbjct: 1 MGNKVNPVGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIKDFVRKEAKQAGISHVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKLS +T+SE+HL++ EV KPE++A L+ +SI Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIETLRKKLSALTDSELHLNIVEVRKPELDAALVGESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A+TAYG GIKV++ + E+ + D P A R + + Sbjct: 181 DIDYALSEAQTAYGIIGIKVWIF-KGEILEHD---PQAHDRRITE 221 >gi|92112560|ref|YP_572488.1| 30S ribosomal protein S3 [Chromohalobacter salexigens DSM 3043] gi|122990610|sp|Q1R0G9|RS3_CHRSD RecName: Full=30S ribosomal protein S3 gi|91795650|gb|ABE57789.1| SSU ribosomal protein S3P [Chromohalobacter salexigens DSM 3043] Length = 232 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 149/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ S W+A Y L+ DL++R +L+ LK A V+ I IER Sbjct: 1 MGQKVNPTGIRLGIVKDHRSVWYAERGAYADKLNNDLEVRRFLEQRLKNASVSDITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N RI +++ARPG++IGKKG D++++R+ +S M +H+++ EV KPE++A L+AQ++ Sbjct: 61 ANNARITIHTARPGIVIGKKGEDVDRLRRDVSEMMGVPVHVNIEEVRKPELDAQLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 CGQLERRVMFRRAMKRAVQNAMRLGAGGIKIQLSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T A T YG G+KV+V + + + + Sbjct: 181 DIDYATYEAHTTYGVIGVKVWVFKGEILGGIEEVRAKQKQAQAP 224 >gi|206901441|ref|YP_002250707.1| ribosomal protein S3 [Dictyoglomus thermophilum H-6-12] gi|226697700|sp|B5YDU9|RS3_DICT6 RecName: Full=30S ribosomal protein S3 gi|206740544|gb|ACI19602.1| ribosomal protein S3 [Dictyoglomus thermophilum H-6-12] Length = 245 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FRLG+ W S W+A S+Y +LLHED IR YL+ + QAG++ I IER Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYLKKNYYQAGISLIEIERK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I +++ARPG++IG+ G++IE IRK L +TN + ++V EV PE++A L+A++ Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLIKLTNKNVFVNVQEVKNPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+E+R+ ++RAMK+A+ A+R GA G+KV+ SGRLNGAE++R+E + EGR+PLQTL Sbjct: 121 IAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYG A A T G G+KV++ D I + V K Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQELPEKAVPKK 227 >gi|157372770|ref|YP_001480759.1| 30S ribosomal protein S3 [Serratia proteamaculans 568] gi|172047789|sp|A8GKJ1|RS3_SERP5 RecName: Full=30S ribosomal protein S3 gi|157324534|gb|ABV43631.1| ribosomal protein S3 [Serratia proteamaculans 568] Length = 232 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLIKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++N+ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVANIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|78064930|ref|YP_367699.1| 30S ribosomal protein S3 [Burkholderia sp. 383] gi|107024297|ref|YP_622624.1| 30S ribosomal protein S3 [Burkholderia cenocepacia AU 1054] gi|115350328|ref|YP_772167.1| 30S ribosomal protein S3 [Burkholderia ambifaria AMMD] gi|116688378|ref|YP_834001.1| 30S ribosomal protein S3 [Burkholderia cenocepacia HI2424] gi|134294449|ref|YP_001118184.1| 30S ribosomal protein S3 [Burkholderia vietnamiensis G4] gi|170700700|ref|ZP_02891695.1| ribosomal protein S3 [Burkholderia ambifaria IOP40-10] gi|170731688|ref|YP_001763635.1| 30S ribosomal protein S3 [Burkholderia cenocepacia MC0-3] gi|171318354|ref|ZP_02907512.1| ribosomal protein S3 [Burkholderia ambifaria MEX-5] gi|172059347|ref|YP_001806999.1| 30S ribosomal protein S3 [Burkholderia ambifaria MC40-6] gi|206558647|ref|YP_002229407.1| 30S ribosomal protein S3 [Burkholderia cenocepacia J2315] gi|91207644|sp|Q39KG1|RS3_BURS3 RecName: Full=30S ribosomal protein S3 gi|122324260|sp|Q0BJ40|RS3_BURCM RecName: Full=30S ribosomal protein S3 gi|123071807|sp|Q1BRV4|RS3_BURCA RecName: Full=30S ribosomal protein S3 gi|152060850|sp|A0K3N1|RS3_BURCH RecName: Full=30S ribosomal protein S3 gi|189044961|sp|A4JAP6|RS3_BURVG RecName: Full=30S ribosomal protein S3 gi|226697672|sp|B1YRD6|RS3_BURA4 RecName: Full=30S ribosomal protein S3 gi|226697673|sp|B1JU28|RS3_BURCC RecName: Full=30S ribosomal protein S3 gi|226697674|sp|B4E5C6|RS3_BURCJ RecName: Full=30S ribosomal protein S3 gi|77965675|gb|ABB07055.1| SSU ribosomal protein S3P [Burkholderia sp. 383] gi|105894486|gb|ABF77651.1| SSU ribosomal protein S3P [Burkholderia cenocepacia AU 1054] gi|115280316|gb|ABI85833.1| SSU ribosomal protein S3P [Burkholderia ambifaria AMMD] gi|116646467|gb|ABK07108.1| SSU ribosomal protein S3P [Burkholderia cenocepacia HI2424] gi|134137606|gb|ABO53349.1| SSU ribosomal protein S3P [Burkholderia vietnamiensis G4] gi|169814930|gb|ACA89513.1| ribosomal protein S3 [Burkholderia cenocepacia MC0-3] gi|170134370|gb|EDT02703.1| ribosomal protein S3 [Burkholderia ambifaria IOP40-10] gi|171096432|gb|EDT41331.1| ribosomal protein S3 [Burkholderia ambifaria MEX-5] gi|171991864|gb|ACB62783.1| ribosomal protein S3 [Burkholderia ambifaria MC40-6] gi|198034684|emb|CAR50551.1| 30S ribosomal protein S3 [Burkholderia cenocepacia J2315] Length = 266 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 117/229 (51%), Positives = 166/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE+++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEQLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229 >gi|330430095|gb|AEC21429.1| 30S ribosomal protein S3 [Pusillimonas sp. T7-7] Length = 267 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 121/218 (55%), Positives = 163/218 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRL VN W+SRW+A +G +L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPIGFRLAVNRNWSSRWYADDKAFGGMLAEDIRVREYLKKKLKSASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIENLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYGT+ A+T YG GIKV+V D + + + A Sbjct: 181 NIDYGTSEAQTTYGIIGIKVWVYKGDMLPNGELPPETA 218 >gi|317494336|ref|ZP_07952750.1| ribosomal protein S3 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917586|gb|EFV38931.1| ribosomal protein S3 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 233 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 157/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|83591270|ref|YP_431279.1| 30S ribosomal protein S3 [Moorella thermoacetica ATCC 39073] gi|123766691|sp|Q2RFQ3|RS3_MOOTA RecName: Full=30S ribosomal protein S3 gi|83574184|gb|ABC20736.1| SSU ribosomal protein S3P [Moorella thermoacetica ATCC 39073] Length = 219 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 153/211 (72%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+SRW+A G EY LLHEDLKIRE+++ L QAG+A + IER Sbjct: 1 MGQKVHPKGLRLGIIRDWDSRWYA-GKEYKTLLHEDLKIREFIKKRLYQAGIASVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IV +A+PG++IG+ G ++E +RK L +T +++L++ E+ KPE+NA L+A+++ Sbjct: 60 ANRIKVIVNTAKPGIVIGRGGAEVEALRKDLERLTGKQVNLNIAEIKKPELNAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+AV AMR GA G+K+ GRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AAQLEKRIAFRRAMKQAVGRAMRLGAQGIKIACGGRLAGAEIARTEWYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG G+KV++ + + + Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPER 210 >gi|257791918|ref|YP_003182524.1| 30S ribosomal protein S3 [Eggerthella lenta DSM 2243] gi|317489924|ref|ZP_07948416.1| ribosomal protein S3 [Eggerthella sp. 1_3_56FAA] gi|325829995|ref|ZP_08163453.1| ribosomal protein S3 [Eggerthella sp. HGA1] gi|257475815|gb|ACV56135.1| ribosomal protein S3 [Eggerthella lenta DSM 2243] gi|316910922|gb|EFV32539.1| ribosomal protein S3 [Eggerthella sp. 1_3_56FAA] gi|325488162|gb|EGC90599.1| ribosomal protein S3 [Eggerthella sp. HGA1] Length = 237 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 113/219 (51%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W SRW+A +Y L DL IR++L L +A V+KI IER Sbjct: 1 MGQKVSPTGFRLGITEEWRSRWYAD-KDYAKNLANDLAIRKFLDKQLARAAVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIV +ARPG++IGKKG +I+ +RKKL + N + + V EV +PE++A LIAQS+ Sbjct: 60 GDKIKIIVTTARPGVVIGKKGAEIDSLRKKLEKVANGPVSIEVVEVKRPELDAALIAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAKGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A T GS G++V+V + + + PA E Sbjct: 180 KIDYGFATAATTMGSIGVQVWVYHGEVLPGQKAPQPALE 218 >gi|330447031|ref|ZP_08310681.1| ribosomal protein S3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491222|dbj|GAA05178.1| ribosomal protein S3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 229 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 154/227 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG G+KV++ + + P AE ++ S Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPVEEPKAEKPKKQRKS 227 >gi|332107872|gb|EGJ09096.1| 30S ribosomal protein S3 [Rubrivivax benzoatilyticus JA2] Length = 289 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 115/220 (52%), Positives = 160/220 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRWFA + +L EDL++R+YL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLSVTRAWGSRWFASNRNFAGMLAEDLQVRDYLKTKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++ +L+ + +++ EV KPE++A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKAELTKRLGVPVAVNIEEVRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG + A+T YG G+KV+V D +++ ++ A Sbjct: 181 DIDYGFSEAKTTYGVIGVKVWVYRGDRLANGEAPQLAKTE 220 >gi|89902549|ref|YP_525020.1| 30S ribosomal protein S3 [Rhodoferax ferrireducens T118] gi|122996738|sp|Q21RW4|RS3_RHOFD RecName: Full=30S ribosomal protein S3 gi|89347286|gb|ABD71489.1| SSU ribosomal protein S3P [Rhodoferax ferrireducens T118] Length = 298 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 120/224 (53%), Positives = 165/224 (73%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL ++ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER Sbjct: 1 MGQKIHPTGFRLSISRNWASRWYANDRDFAGMLAEDIKVREYLKAKLKNASVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++++LS + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYGT+ A+T YG G+KV+V D + +D +PAA + Sbjct: 181 DIDYGTSEAQTTYGIIGVKVWVYKGDTLGRND--LPAAVEARTD 222 >gi|226329487|ref|ZP_03805005.1| hypothetical protein PROPEN_03396 [Proteus penneri ATCC 35198] gi|225202673|gb|EEG85027.1| hypothetical protein PROPEN_03396 [Proteus penneri ATCC 35198] Length = 224 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYAGTNEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKNVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY T+ A+T YG G+KV++ + E+ + + AE Sbjct: 181 DIDYNTSEAQTTYGVLGVKVWIF-KGEILGGMAAVEQAEK 219 >gi|326385093|ref|ZP_08206763.1| 30S ribosomal protein S3 [Gordonia neofelifaecis NRRL B-59395] gi|326196178|gb|EGD53382.1| 30S ribosomal protein S3 [Gordonia neofelifaecis NRRL B-59395] Length = 267 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ WNSRW+A +Y + ED+ IR+ L L++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWNSRWYAD-KQYAEYVKEDVAIRKLLSTGLERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEADAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G G++V SGRL GAE+SR E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPGVKGIRVQCSGRLGGAEMSRKEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A T +G G+KV++ D V AA Sbjct: 180 ADIDYGLYEARTTFGRIGVKVWIYKGDIVGGRRELAAAAPAE 221 >gi|319787919|ref|YP_004147394.1| ribosomal protein S3 [Pseudoxanthomonas suwonensis 11-1] gi|317466431|gb|ADV28163.1| ribosomal protein S3 [Pseudoxanthomonas suwonensis 11-1] Length = 242 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 118/226 (52%), Positives = 158/226 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG+ WNS+W+A EY L DLK+R+ L+ L QAG+++ILIER Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYAGKGEYADYLAADLKVRKMLRKKLAQAGISRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S M H++V+EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVSEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG GIKV+V + + E + Sbjct: 181 DIDYGFAEAHTTYGVIGIKVWVYKGEIFDFAQVGQEKQEEASSPRG 226 >gi|326793564|ref|YP_004311384.1| ribosomal protein S3 [Marinomonas mediterranea MMB-1] gi|326544328|gb|ADZ89548.1| ribosomal protein S3 [Marinomonas mediterranea MMB-1] Length = 226 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 154/227 (67%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y LL DL++R+YL+ L QA V++I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRKYLEEKLVQASVSRIEIQRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE+++ L+AQ+I Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRNAVSKMMGVPVHINIEEIRKPELDSKLVAQNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T A T YG G+KV++ + + + AE +K S Sbjct: 181 DIDYATYEASTTYGIIGVKVWIFKGEILGGIEQV--RAEKGAQKKKS 225 >gi|304399285|ref|ZP_07381151.1| ribosomal protein S3 [Pantoea sp. aB] gi|308188351|ref|YP_003932482.1| 30S ribosomal protein S3 [Pantoea vagans C9-1] gi|304353211|gb|EFM17592.1| ribosomal protein S3 [Pantoea sp. aB] gi|308058861|gb|ADO11033.1| 30S ribosomal protein S3 [Pantoea vagans C9-1] Length = 232 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 157/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA +E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTNEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVAKIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|183600747|ref|ZP_02962240.1| hypothetical protein PROSTU_04341 [Providencia stuartii ATCC 25827] gi|188019725|gb|EDU57765.1| hypothetical protein PROSTU_04341 [Providencia stuartii ATCC 25827] Length = 233 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDYKVRQYLNKELAKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|121997643|ref|YP_001002430.1| 30S ribosomal protein S3 [Halorhodospira halophila SL1] gi|152060865|sp|A1WVB6|RS3_HALHL RecName: Full=30S ribosomal protein S3 gi|121589048|gb|ABM61628.1| SSU ribosomal protein S3P [Halorhodospira halophila SL1] Length = 228 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 108/223 (48%), Positives = 155/223 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K +P FRLGV W S W+A S +G L+ DL++RE+++ LK A V++I IER Sbjct: 1 MGNKTHPTGFRLGVTEDWRSMWYADSSNFGKYLNTDLEVREFIRERLKNASVSRIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN + +++ARPG++IGKKG DI+++R +++ +H+++ E+ KPE ++ L+A+SI Sbjct: 61 AKNALVTIHTARPGIVIGKKGEDIDRLRGEVAARMGVPVHINIEEIRKPEADSKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRA+KRAV +A R GA G+KV SGRLNG+E++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRALKRAVGNAQRVGAQGIKVQVSGRLNGSEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDYG A A+T YG G+KV++ + + + PA + Sbjct: 181 DIDYGFAEAKTTYGVIGVKVWIFKGEIIDTENEGAPAERVKRA 223 >gi|163859267|ref|YP_001633565.1| 30S ribosomal protein S3 [Bordetella petrii DSM 12804] gi|226697669|sp|A9IIZ1|RS3_BORPD RecName: Full=30S ribosomal protein S3 gi|163262995|emb|CAP45298.1| 30S ribosomal protein S3 [Bordetella petrii] Length = 263 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 119/218 (54%), Positives = 163/218 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRWFA +G++L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGSMLAEDIRVREYLKKKLKSASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYGT+ A T YG GIKV+V D +++ + AA Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPPEAA 218 >gi|320540603|ref|ZP_08040253.1| 30S ribosomal subunit protein S3 [Serratia symbiotica str. Tucson] gi|320029534|gb|EFW11563.1| 30S ribosomal subunit protein S3 [Serratia symbiotica str. Tucson] Length = 232 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLAKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVDVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|86158363|ref|YP_465148.1| SSU ribosomal protein S3P [Anaeromyxobacter dehalogenans 2CP-C] gi|123723040|sp|Q2IJ82|RS3_ANADE RecName: Full=30S ribosomal protein S3 gi|85774874|gb|ABC81711.1| SSU ribosomal protein S3P [Anaeromyxobacter dehalogenans 2CP-C] Length = 224 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 155/209 (74%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV +W+S+W+ Y LHED+K+RE+++ L QAG+++I IER Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIKLREFVKEKLGQAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V++ARPG++IGK+G IE I+K L +T++E++L+V EV K E +A L+A++I Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKDLQGLTDNEVYLNVVEVRKAETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G KV++ + + Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLP 208 >gi|253998020|ref|YP_003050083.1| 30S ribosomal protein S3 [Methylovorus sp. SIP3-4] gi|313200087|ref|YP_004038745.1| 30S ribosomal protein S3 [Methylovorus sp. MP688] gi|253984699|gb|ACT49556.1| ribosomal protein S3 [Methylovorus sp. SIP3-4] gi|312439403|gb|ADQ83509.1| ribosomal protein S3 [Methylovorus sp. MP688] Length = 237 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 125/229 (54%), Positives = 166/229 (72%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + A+L+ D+K+R++L+ L A V+KI+IER Sbjct: 1 MGQKIHPFGFRLSVQKNWSSRWYANSKNFPAMLNSDIKVRDFLKKKLSHAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIA+SI Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRSSLQGLMGVPVHLNIEEVRKPEIDATLIAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS---DSDSTIPAAEHRVVEKD 226 IDYG A A+T YG GIKV+V + + + +PA + V K Sbjct: 181 DIDYGVAEAKTTYGIIGIKVWVFKGEVFGTHAEQQAAVPAEPEKKVRKS 229 >gi|197122345|ref|YP_002134296.1| ribosomal protein S3 [Anaeromyxobacter sp. K] gi|220917127|ref|YP_002492431.1| ribosomal protein S3 [Anaeromyxobacter dehalogenans 2CP-1] gi|226697661|sp|B4UBA5|RS3_ANASK RecName: Full=30S ribosomal protein S3 gi|254764508|sp|B8J866|RS3_ANAD2 RecName: Full=30S ribosomal protein S3 gi|196172194|gb|ACG73167.1| ribosomal protein S3 [Anaeromyxobacter sp. K] gi|219954981|gb|ACL65365.1| ribosomal protein S3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 224 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 155/209 (74%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV +W+S+W+ Y LHED+K+RE+++ L QAG+++I IER Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIKLREFVKEKLGQAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V++ARPG++IGK+G IE I+K L +T++E++L+V EV K E +A L+A++I Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKDLQGLTDNEVYLNVVEVRKAETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G KV++ + + Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLP 208 >gi|330432118|gb|AEC17177.1| 30S ribosomal protein S3 [Gallibacterium anatis UMN179] Length = 235 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 155/225 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S W+A ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWYANTQDFADNLDGDFKVRKFLTKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A+SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA A T YG G+KV++ + + + + + + + +K Sbjct: 181 DIDYNTAEANTTYGVIGVKVWIFKGEILGGMAAVMQSEQQQPADK 225 >gi|54022706|ref|YP_116948.1| 30S ribosomal protein S3 [Nocardia farcinica IFM 10152] gi|61215424|sp|Q5Z1V7|RS3_NOCFA RecName: Full=30S ribosomal protein S3 gi|54014214|dbj|BAD55584.1| putative ribosomal protein S3 [Nocardia farcinica IFM 10152] Length = 267 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 148/219 (67%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRKLLATGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRAELEKLTGKQVQLNILEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A+T +G G+KV++ D V A+ Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELTAAS 218 >gi|50122945|ref|YP_052112.1| 30S ribosomal protein S3 [Pectobacterium atrosepticum SCRI1043] gi|61215521|sp|Q6CZX6|RS3_ERWCT RecName: Full=30S ribosomal protein S3 gi|49613471|emb|CAG76922.1| 30S ribosomal subunit protein S3 [Pectobacterium atrosepticum SCRI1043] Length = 233 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRKYLTKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + P+A+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPSAQPKKQQRK 230 >gi|329298527|ref|ZP_08255863.1| 30S ribosomal protein S3 [Plautia stali symbiont] Length = 232 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 156/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTEEFADNLDSDFKVRQFLNKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARP ++IGKKG D+EK+R ++N+ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPAIVIGKKGEDVEKLRTVVANIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|126736606|ref|ZP_01752346.1| ribosomal protein S3 [Roseobacter sp. CCS2] gi|126713919|gb|EBA10790.1| ribosomal protein S3 [Roseobacter sp. CCS2] Length = 233 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 123/227 (54%), Positives = 172/227 (75%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRW+A +YG LL EDL+I+++++ Q+GV++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIKDFIKKECAQSGVSRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIEGLRKKLAALTDSELHLNIVEVRKPELDAALVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 GQQLERRVSFRRAMKRSVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A T YG GIKV++ + E+ + D + +H +++ + Sbjct: 181 DIDYALYEAMTPYGIIGIKVFIY-KGEIMEHDPSAHDRKHAELQEGA 226 >gi|94500987|ref|ZP_01307512.1| ribosomal protein S3 [Oceanobacter sp. RED65] gi|94426927|gb|EAT11910.1| ribosomal protein S3 [Oceanobacter sp. RED65] Length = 230 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 154/226 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ NS W+A Y L D+++R ++ L++A V+K+ IER Sbjct: 1 MGQKVHPTGIRLGITKDHNSVWYAGKDTYADQLLTDIQVRSMIEKRLEKASVSKVTIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +I +++ARPG++IGKKG D++ +RK +++M +HL++ E+ KP+++A L+AQS+ Sbjct: 61 AQTAKITIHTARPGIVIGKKGEDVDALRKDVADMMGIPVHLNIEEIRKPDLDAKLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ANQLERRVMFRRAMKRAVQNAMRGGAEGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T A T YG G+KV++ + + D A+ +K Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGIDEVRARAKSGGAKKQ 226 >gi|52308149|gb|AAU38649.1| RpsC protein [Mannheimia succiniciproducens MBEL55E] Length = 246 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 6/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W+S WFA ++ + L D K+R++L L A V++I IER Sbjct: 12 MGQKVNPHGIRLGIVKPWSSTWFANTQDFASNLDGDFKVRKFLNKELANASVSRITIERP 71 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 72 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 131 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 132 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 191 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + PAA + Sbjct: 192 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 241 >gi|292492427|ref|YP_003527866.1| ribosomal protein S3 [Nitrosococcus halophilus Nc4] gi|291581022|gb|ADE15479.1| ribosomal protein S3 [Nitrosococcus halophilus Nc4] Length = 223 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 109/217 (50%), Positives = 156/217 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS+W+A S++ LL+ DL +R +L L A V+ I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDWNSKWYADSSQFSDLLNNDLGVRSHLTKKLSHALVSNIQIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++ Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSEMMGIPVHINIQEIRKPELDATLVAANV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARNEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 +IDYG A A+T YG G+KV++ + D + A Sbjct: 181 NIDYGFAEAKTTYGVLGVKVWIFKGEVFEQPDQQVTA 217 >gi|258543827|ref|ZP_05704061.1| 30S ribosomal protein S3 [Cardiobacterium hominis ATCC 15826] gi|258520916|gb|EEV89775.1| 30S ribosomal protein S3 [Cardiobacterium hominis ATCC 15826] Length = 245 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 157/227 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV+ W S+W+A G +Y L +D ++RE+++ L A V++I IER Sbjct: 6 MGQKVHPIGFRLGVSKDWVSKWYAEGKDYANFLEKDFEVREFIRKKLAHASVSQIQIERP 65 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPG++IG+KG DIE +++++S++ +++ E+ +PE++A L+A I Sbjct: 66 RNGAQITIFTARPGIVIGRKGEDIEVLKQEISSIMGVPTSVNIEEIRRPELDAYLVADGI 125 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERRV+FRRAMKR+V S MR GA G+KV +GRLNGAE++RTE Y EGRVPL TLRA Sbjct: 126 AKQLERRVMFRRAMKRSVASTMRLGAAGIKVSIAGRLNGAEIARTEWYREGRVPLHTLRA 185 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T YG G+KV++ + + D+ EK + Sbjct: 186 DIDYGFAEAHTTYGVIGVKVWIFKGENLEGLDANGNVVGEVPEEKRA 232 >gi|167564411|ref|ZP_02357327.1| 30S ribosomal protein S3 [Burkholderia oklahomensis EO147] gi|167571557|ref|ZP_02364431.1| 30S ribosomal protein S3 [Burkholderia oklahomensis C6786] Length = 266 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229 >gi|27364209|ref|NP_759737.1| 30S ribosomal protein S3 [Vibrio vulnificus CMCP6] gi|37678565|ref|NP_933174.1| 30S ribosomal protein S3 [Vibrio vulnificus YJ016] gi|320157595|ref|YP_004189974.1| 30S ribosomal protein S3p (S3e) [Vibrio vulnificus MO6-24/O] gi|29427440|sp|Q8DE45|RS3_VIBVU RecName: Full=30S ribosomal protein S3 gi|61215668|sp|Q7MPI2|RS3_VIBVY RecName: Full=30S ribosomal protein S3 gi|27360327|gb|AAO09264.1| ribosomal protein S3 [Vibrio vulnificus CMCP6] gi|37197305|dbj|BAC93145.1| ribosomal protein S3 [Vibrio vulnificus YJ016] gi|319932907|gb|ADV87771.1| SSU ribosomal protein S3p (S3e) [Vibrio vulnificus MO6-24/O] Length = 233 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 154/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELSKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + + + AAE + + Sbjct: 181 DIDYATSSAHTTYGVIGIKVWIFKGEILGGMPAATEAAEPKADK 224 >gi|270264367|ref|ZP_06192633.1| 30S ribosomal protein S3 [Serratia odorifera 4Rx13] gi|270041503|gb|EFA14601.1| 30S ribosomal protein S3 [Serratia odorifera 4Rx13] Length = 232 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLIKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|33152952|ref|NP_874305.1| 30S ribosomal protein S3 [Haemophilus ducreyi 35000HP] gi|61215714|sp|Q7VKD7|RS3_HAEDU RecName: Full=30S ribosomal protein S3 gi|33149177|gb|AAP96694.1| 30S ribosomal protein S3 [Haemophilus ducreyi 35000HP] Length = 234 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 113/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + V +S+ A + K Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEQQPAAQPKKQARKG 232 >gi|121603126|ref|YP_980455.1| 30S ribosomal protein S3 [Polaromonas naphthalenivorans CJ2] gi|152060890|sp|A1VIQ6|RS3_POLNA RecName: Full=30S ribosomal protein S3 gi|120592095|gb|ABM35534.1| SSU ribosomal protein S3P [Polaromonas naphthalenivorans CJ2] Length = 295 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 121/225 (53%), Positives = 164/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL ++ W+SRW+A ++ +L ED+K+REYL+ LK A V+++LIER Sbjct: 1 MGQKINPTGFRLSISRNWSSRWYANNRDFAGMLAEDIKVREYLKKKLKNAAVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+LS + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEALKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYGT+ A+T YG G+KV+V D + +D T E+ Sbjct: 181 DIDYGTSEAQTTYGIIGVKVWVYKGDTLGRNDGTGAKMIEVADEE 225 >gi|317401543|gb|EFV82172.1| 30S ribosomal protein S3 [Achromobacter xylosoxidans C54] Length = 263 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 117/212 (55%), Positives = 161/212 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRWFA +G++L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGSMLAEDIRVREYLKKKLKSASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYGT+ A T YG GIKV+V D +++ + Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGE 212 >gi|89893223|ref|YP_516710.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense Y51] gi|123091860|sp|Q250M6|RS3_DESHY RecName: Full=30S ribosomal protein S3 gi|89332671|dbj|BAE82266.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense Y51] Length = 219 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 105/212 (49%), Positives = 150/212 (70%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W RWFA Y LLHEDLK+R++++ L+QAGV K+ IER Sbjct: 1 MGQKVNPKGLRVGIIRDWEGRWFAD-KNYLELLHEDLKVRKFVKTKLQQAGVPKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ GT++E +RK+L MT ++ +++ EV KPE++A L+A+S+ Sbjct: 60 ANRVKVSIHAAKPGIVIGRGGTEVENLRKQLEAMTGKQVAVNIVEVKKPELDAQLVAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMK+ VQ MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AQQLEKRVSFRRAMKQTVQRTMRQGGQGIKISCSGRLGGAEIARTEWYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAKK 211 >gi|238921436|ref|YP_002934951.1| 30S ribosomal protein S3 [Edwardsiella ictaluri 93-146] gi|294638046|ref|ZP_06716306.1| ribosomal protein S3 [Edwardsiella tarda ATCC 23685] gi|259495245|sp|C5BGL9|RS3_EDWI9 RecName: Full=30S ribosomal protein S3 gi|238871005|gb|ACR70716.1| 30S ribosomal protein S3, putative [Edwardsiella ictaluri 93-146] gi|291088838|gb|EFE21399.1| ribosomal protein S3 [Edwardsiella tarda ATCC 23685] Length = 233 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 157/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLNKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVAEIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|22127865|ref|NP_671288.1| 30S ribosomal protein S3 [Yersinia pestis KIM 10] gi|45440073|ref|NP_991612.1| 30S ribosomal protein S3 [Yersinia pestis biovar Microtus str. 91001] gi|51597982|ref|YP_072173.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 32953] gi|108814013|ref|YP_649780.1| 30S ribosomal protein S3 [Yersinia pestis Nepal516] gi|123444092|ref|YP_001008062.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|145597458|ref|YP_001161533.1| 30S ribosomal protein S3 [Yersinia pestis Pestoides F] gi|150260737|ref|ZP_01917465.1| 30S ribosomal protein S3 [Yersinia pestis CA88-4125] gi|153949533|ref|YP_001402857.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 31758] gi|162419812|ref|YP_001605181.1| 30S ribosomal protein S3 [Yersinia pestis Angola] gi|165927901|ref|ZP_02223733.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str. F1991016] gi|166010543|ref|ZP_02231441.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213311|ref|ZP_02239346.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167419228|ref|ZP_02310981.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425626|ref|ZP_02317379.1| ribosomal protein S3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022550|ref|YP_001719055.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis YPIII] gi|186897178|ref|YP_001874290.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis PB1/+] gi|218927421|ref|YP_002345296.1| 30S ribosomal protein S3 [Yersinia pestis CO92] gi|229836303|ref|ZP_04456470.1| 30S ribosomal subunit protein S3 [Yersinia pestis Pestoides A] gi|229840073|ref|ZP_04460232.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842155|ref|ZP_04462310.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis str. India 195] gi|229904545|ref|ZP_04519656.1| 30S ribosomal subunit protein S3 [Yersinia pestis Nepal516] gi|238752681|ref|ZP_04614152.1| 30S ribosomal protein S3 [Yersinia rohdei ATCC 43380] gi|238758770|ref|ZP_04619944.1| 30S ribosomal protein S3 [Yersinia aldovae ATCC 35236] gi|238763724|ref|ZP_04624683.1| 30S ribosomal protein S3 [Yersinia kristensenii ATCC 33638] gi|238783175|ref|ZP_04627201.1| 30S ribosomal protein S3 [Yersinia bercovieri ATCC 43970] gi|238788904|ref|ZP_04632694.1| 30S ribosomal protein S3 [Yersinia frederiksenii ATCC 33641] gi|238792944|ref|ZP_04636574.1| 30S ribosomal protein S3 [Yersinia intermedia ATCC 29909] gi|238797232|ref|ZP_04640733.1| 30S ribosomal protein S3 [Yersinia mollaretii ATCC 43969] gi|270488238|ref|ZP_06205312.1| ribosomal protein S3 [Yersinia pestis KIM D27] gi|294502294|ref|YP_003566356.1| 30S ribosomal protein S3 [Yersinia pestis Z176003] gi|332163253|ref|YP_004299830.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|27734519|sp|Q8ZJA6|RS3_YERPE RecName: Full=30S ribosomal protein S3 gi|61215489|sp|Q664S7|RS3_YERPS RecName: Full=30S ribosomal protein S3 gi|123073065|sp|Q1CCV0|RS3_YERPN RecName: Full=30S ribosomal protein S3 gi|152060915|sp|A1JS29|RS3_YERE8 RecName: Full=30S ribosomal protein S3 gi|152060916|sp|A4TGZ8|RS3_YERPP RecName: Full=30S ribosomal protein S3 gi|189045347|sp|A7FNM9|RS3_YERP3 RecName: Full=30S ribosomal protein S3 gi|226697779|sp|B2K5M4|RS3_YERPB RecName: Full=30S ribosomal protein S3 gi|226697780|sp|A9R902|RS3_YERPG RecName: Full=30S ribosomal protein S3 gi|226697781|sp|B1JIW7|RS3_YERPY RecName: Full=30S ribosomal protein S3 gi|21961000|gb|AAM87539.1|AE014002_12 30S ribosomal subunit protein S3 [Yersinia pestis KIM 10] gi|45434928|gb|AAS60489.1| 30S ribosomal protein S3 [Yersinia pestis biovar Microtus str. 91001] gi|51591264|emb|CAH22930.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 32953] gi|108777661|gb|ABG20180.1| SSU ribosomal protein S3P [Yersinia pestis Nepal516] gi|115346032|emb|CAL18898.1| 30S ribosomal protein S3 [Yersinia pestis CO92] gi|122091053|emb|CAL13936.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|145209154|gb|ABP38561.1| SSU ribosomal protein S3P [Yersinia pestis Pestoides F] gi|149290145|gb|EDM40222.1| 30S ribosomal protein S3 [Yersinia pestis CA88-4125] gi|152961028|gb|ABS48489.1| ribosomal protein S3 [Yersinia pseudotuberculosis IP 31758] gi|162352627|gb|ABX86575.1| ribosomal protein S3 [Yersinia pestis Angola] gi|165920177|gb|EDR37478.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990633|gb|EDR42934.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205609|gb|EDR50089.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166963222|gb|EDR59243.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055316|gb|EDR65110.1| ribosomal protein S3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749084|gb|ACA66602.1| ribosomal protein S3 [Yersinia pseudotuberculosis YPIII] gi|186700204|gb|ACC90833.1| ribosomal protein S3 [Yersinia pseudotuberculosis PB1/+] gi|229678663|gb|EEO74768.1| 30S ribosomal subunit protein S3 [Yersinia pestis Nepal516] gi|229690465|gb|EEO82519.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis str. India 195] gi|229696439|gb|EEO86486.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706371|gb|EEO92378.1| 30S ribosomal subunit protein S3 [Yersinia pestis Pestoides A] gi|238698026|gb|EEP90784.1| 30S ribosomal protein S3 [Yersinia kristensenii ATCC 33638] gi|238703067|gb|EEP95610.1| 30S ribosomal protein S3 [Yersinia aldovae ATCC 35236] gi|238709108|gb|EEQ01355.1| 30S ribosomal protein S3 [Yersinia rohdei ATCC 43380] gi|238715971|gb|EEQ07957.1| 30S ribosomal protein S3 [Yersinia bercovieri ATCC 43970] gi|238718869|gb|EEQ10684.1| 30S ribosomal protein S3 [Yersinia mollaretii ATCC 43969] gi|238722931|gb|EEQ14581.1| 30S ribosomal protein S3 [Yersinia frederiksenii ATCC 33641] gi|238727798|gb|EEQ19322.1| 30S ribosomal protein S3 [Yersinia intermedia ATCC 29909] gi|262360374|gb|ACY57095.1| 30S ribosomal protein S3 [Yersinia pestis D106004] gi|262364326|gb|ACY60883.1| 30S ribosomal protein S3 [Yersinia pestis D182038] gi|270336742|gb|EFA47519.1| ribosomal protein S3 [Yersinia pestis KIM D27] gi|294352753|gb|ADE63094.1| 30S ribosomal protein S3 [Yersinia pestis Z176003] gi|318607738|emb|CBY29236.1| SSU ribosomal protein S3p (S3e) [Yersinia enterocolitica subsp. palearctica Y11] gi|320013348|gb|ADV96919.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Medievalis str. Harbin 35] gi|325667483|gb|ADZ44127.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861849|emb|CBX72020.1| 30S ribosomal protein S3 [Yersinia enterocolitica W22703] Length = 232 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|325529684|gb|EGD06547.1| 30S ribosomal protein S3 [Burkholderia sp. TJI49] Length = 266 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 166/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE+++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIEQLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229 >gi|212708987|ref|ZP_03317115.1| hypothetical protein PROVALCAL_00019 [Providencia alcalifaciens DSM 30120] gi|261346929|ref|ZP_05974573.1| ribosomal protein S3 [Providencia rustigianii DSM 4541] gi|212688353|gb|EEB47881.1| hypothetical protein PROVALCAL_00019 [Providencia alcalifaciens DSM 30120] gi|282564994|gb|EFB70529.1| ribosomal protein S3 [Providencia rustigianii DSM 4541] Length = 233 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDFKVRQYLNKELAKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|256821668|ref|YP_003145631.1| 30S ribosomal protein S3 [Kangiella koreensis DSM 16069] gi|256795207|gb|ACV25863.1| ribosomal protein S3 [Kangiella koreensis DSM 16069] Length = 233 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ + W+A ++ L D+ IR++L LK A ++++ IER Sbjct: 1 MGQKVHPTGIRLGIVKKHTATWYAERGDFADYLESDINIRKWLFKELKNASISRVDIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGKKG DIEK+R K++NM +SV +V KPE++A L+ ++ Sbjct: 61 AKAIRVTIHTARPGIVIGKKGEDIEKLRAKIANMAGVSAQVSVEQVRKPELDAQLVGDNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA+G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRLGAEGIKIEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG GIKV++ + + + P + + + Sbjct: 181 DIDYATSEALTTYGIIGIKVWIFKGEVLPGQEKVEPKEDKKPRRRK 226 >gi|260772102|ref|ZP_05881019.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14] gi|260612969|gb|EEX38171.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14] Length = 232 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLTKELAKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + ++++EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINISEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIF-KGEILGGMPAANAVEPKADK 223 >gi|320173955|gb|EFW49131.1| SSU ribosomal protein S3p (S3e) [Shigella dysenteriae CDC 74-1112] Length = 233 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAYTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|74316429|ref|YP_314169.1| 30S ribosomal protein S3 [Thiobacillus denitrificans ATCC 25259] gi|91207848|sp|Q3SLP3|RS3_THIDA RecName: Full=30S ribosomal protein S3 gi|74055924|gb|AAZ96364.1| ribosomal protein S3 [Thiobacillus denitrificans ATCC 25259] Length = 234 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 118/226 (52%), Positives = 163/226 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV W ++W+ + L ED+K+R+YL+ L A V+K+LIER Sbjct: 1 MGQKIHPIGFRLGVQRIWTAKWYGSNRNFSDTLLEDIKVRDYLKKKLSHASVSKVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S RPG++IGKKG DIE +R +L+ + + +H+++ EV KPE +A ++A I Sbjct: 61 AKNARITIFSGRPGVVIGKKGEDIEVLRGELARLMSVPVHVNIEEVRKPETDAQIVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A+T YG GIKV+V D ++ + A + + +K Sbjct: 181 EIDYGFAEAKTTYGIIGIKVWVYKGDALTRGEQPAAAEQEKRGKKS 226 >gi|161523435|ref|YP_001578447.1| 30S ribosomal protein S3 [Burkholderia multivorans ATCC 17616] gi|189351792|ref|YP_001947420.1| 30S ribosomal protein S3 [Burkholderia multivorans ATCC 17616] gi|221201571|ref|ZP_03574609.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2M] gi|221207354|ref|ZP_03580364.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2] gi|221213492|ref|ZP_03586467.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD1] gi|254253511|ref|ZP_04946829.1| 30S ribosomal protein S3 [Burkholderia dolosa AUO158] gi|226697675|sp|A9ADJ9|RS3_BURM1 RecName: Full=30S ribosomal protein S3 gi|124896120|gb|EAY70000.1| 30S ribosomal protein S3 [Burkholderia dolosa AUO158] gi|160340864|gb|ABX13950.1| ribosomal protein S3 [Burkholderia multivorans ATCC 17616] gi|189335814|dbj|BAG44884.1| small subunit ribosomal protein S3 [Burkholderia multivorans ATCC 17616] gi|221166944|gb|EED99415.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD1] gi|221172942|gb|EEE05379.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2] gi|221178387|gb|EEE10796.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2M] Length = 266 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229 >gi|253991682|ref|YP_003043038.1| 30S ribosomal protein S3 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783132|emb|CAQ86297.1| 30S ribosomal protein S3 [Photorhabdus asymbiotica] Length = 233 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELAKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINISEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|120609047|ref|YP_968725.1| 30S ribosomal protein S3 [Acidovorax citrulli AAC00-1] gi|152060836|sp|A1TJ13|RS3_ACIAC RecName: Full=30S ribosomal protein S3 gi|120587511|gb|ABM30951.1| SSU ribosomal protein S3P [Acidovorax citrulli AAC00-1] Length = 293 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A T YG G+KV+V D + +D +PA E Sbjct: 181 DIDYGTSEAFTTYGVIGLKVWVYKGDTLGRND--LPAVE 217 >gi|117620103|ref|YP_854847.1| ribosomal protein S3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|152060841|sp|A0KF27|RS3_AERHH RecName: Full=30S ribosomal protein S3 gi|117561510|gb|ABK38458.1| ribosomal protein S3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 237 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 149/210 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVAAIAGVPAQINISEVRKPELDGKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210 >gi|89076318|ref|ZP_01162659.1| 30S ribosomal protein S3 [Photobacterium sp. SKA34] gi|90581684|ref|ZP_01237472.1| 30S ribosomal protein S3 [Vibrio angustum S14] gi|89048022|gb|EAR53611.1| 30S ribosomal protein S3 [Photobacterium sp. SKA34] gi|90437099|gb|EAS62302.1| 30S ribosomal protein S3 [Vibrio angustum S14] Length = 229 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 154/227 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG G+KV++ + + P AE ++ S Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPVEEPKAEKPKKQRKS 227 >gi|260770919|ref|ZP_05879848.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972] gi|260614156|gb|EEX39346.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972] gi|315178965|gb|ADT85879.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218] Length = 233 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELSKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIF-KGEILGGMPAANAVEPKADK 223 >gi|257065027|ref|YP_003144699.1| SSU ribosomal protein S3P [Slackia heliotrinireducens DSM 20476] gi|256792680|gb|ACV23350.1| SSU ribosomal protein S3P [Slackia heliotrinireducens DSM 20476] Length = 244 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 108/219 (49%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRW+A +Y L DL IR++L+ L++A V+KI IER Sbjct: 1 MGQKVMPTGFRLGITEDWRSRWYAD-KDYAKNLENDLAIRKFLEKQLEKAAVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+ +ARPG++IGKKG +IE +RK ++ + N +++ V EV +PE++A L+A+S+ Sbjct: 60 GDKIKIIITTARPGVVIGKKGAEIENLRKDVAKVANGAVNIEVIEVKRPELDAVLVAKSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAQGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A T G+ G+KV++ + + PA E Sbjct: 180 KIDYGFATARTTMGAIGVKVWIYHGEVLPGGKVPQPALE 218 >gi|301630258|ref|XP_002944239.1| PREDICTED: 30S ribosomal protein S3-like [Xenopus (Silurana) tropicalis] Length = 291 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A+T YG G+KV+V D + +D +PAAE Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217 >gi|290477186|ref|YP_003470101.1| 30S ribosomal subunit protein S3 [Xenorhabdus bovienii SS-2004] gi|289176534|emb|CBJ83343.1| 30S ribosomal subunit protein S3 [Xenorhabdus bovienii SS-2004] Length = 233 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELVKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|219666496|ref|YP_002456931.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense DCB-2] gi|254764528|sp|B8G1X2|RS3_DESHD RecName: Full=30S ribosomal protein S3 gi|219536756|gb|ACL18495.1| ribosomal protein S3 [Desulfitobacterium hafniense DCB-2] Length = 219 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 106/212 (50%), Positives = 150/212 (70%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W RWFA Y LLHEDLK+R++++ L+QAGV K+ IER Sbjct: 1 MGQKVNPKGLRVGIIRDWEGRWFAD-KNYLELLHEDLKVRKFVKTKLQQAGVPKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+A+PG++IG+ GT++E +RK+L MT ++ +++ EV KPE++A L+A+S+ Sbjct: 60 ANRVKVSIYAAKPGIVIGRGGTEVENLRKQLEAMTGKQVAVNIVEVKKPELDAQLVAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMK+ VQ MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AQQLEKRVSFRRAMKQTVQRTMRQGGQGIKISCSGRLGGAEIARTEWYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAKK 211 >gi|330827889|ref|YP_004390841.1| 30S ribosomal protein S3 [Aeromonas veronii B565] gi|328803025|gb|AEB48224.1| 30S ribosomal protein S3 [Aeromonas veronii B565] Length = 237 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 149/210 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVATIAGVPAQINISEVRKPELDGKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210 >gi|268593547|ref|ZP_06127768.1| ribosomal protein S3 [Providencia rettgeri DSM 1131] gi|291310825|gb|EFE51278.1| ribosomal protein S3 [Providencia rettgeri DSM 1131] Length = 233 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 111/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDYKVRQYLNKELAKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|15803841|ref|NP_289875.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 EDL933] gi|25294470|pir||G85996 30S ribosomal subunit protein S3 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12517946|gb|AAG58435.1|AE005557_4 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str. EDL933] Length = 233 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y E RVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREXRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|319778737|ref|YP_004129650.1| SSU ribosomal protein S3p (S3e) [Taylorella equigenitalis MCE9] gi|317108761|gb|ADU91507.1| SSU ribosomal protein S3p (S3e) [Taylorella equigenitalis MCE9] Length = 296 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 119/216 (55%), Positives = 160/216 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRL V WNSRWFA ++G +L +DL++REYL+ LKQA V ++LIER Sbjct: 1 MGQKVHPTGFRLAVTRNWNSRWFAEDKDFGTMLAQDLRVREYLKRKLKQASVGRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI V++ARPG+IIGK G DI+ ++ L + +H+++ E+ KPE++A LIA SI Sbjct: 61 EKNARITVFTARPGVIIGKGGDDIDALKSDLQRIMGVPVHINIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+KV ASGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAIQNAMRAGAQGIKVAASGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 +DY T+ A T YG GIKV+V D + + ++ + Sbjct: 181 MVDYATSEALTTYGLLGIKVWVYKGDLLPNGEAPVE 216 >gi|224827023|ref|ZP_03700120.1| ribosomal protein S3 [Lutiella nitroferrum 2002] gi|224600689|gb|EEG06875.1| ribosomal protein S3 [Lutiella nitroferrum 2002] Length = 233 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 113/226 (50%), Positives = 155/226 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL VN W+S+WFA ++ +L +D+ +R +L+ L A V ++ IER Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFANSHDFADMLKQDIDVRAFLKKRLANASVGRVTIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE ++K+L +H+++ EV KPEI+A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKKELQKRLGVPVHVNIEEVRKPEIDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY T+ A T YG GIKV+V + P A + K Sbjct: 181 DVDYATSEANTTYGIIGIKVWVYKGELKPGQVQAAPVATEKKTRKG 226 >gi|58583200|ref|YP_202216.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625038|ref|YP_452410.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710837|ref|ZP_02242044.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575496|ref|YP_001912425.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|289665143|ref|ZP_06486724.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|325916493|ref|ZP_08178762.1| SSU ribosomal protein S3P [Xanthomonas vesicatoria ATCC 35937] gi|75508102|sp|Q5GWU0|RS3_XANOR RecName: Full=30S ribosomal protein S3 gi|123752714|sp|Q2NZZ1|RS3_XANOM RecName: Full=30S ribosomal protein S3 gi|58427794|gb|AAW76831.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368978|dbj|BAE70136.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519948|gb|ACD57893.1| ribosomal protein S3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|325537282|gb|EGD09009.1| SSU ribosomal protein S3P [Xanthomonas vesicatoria ATCC 35937] Length = 244 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 156/208 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG++ WNS+W+A ++ A L DLK+RE L+ L QAGV+KILIER Sbjct: 1 MGHKVHPTGIRLGISKDWNSKWYANKGDFAAYLAADLKVREMLRKKLAQAGVSKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV++ + Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208 >gi|293602629|ref|ZP_06685072.1| 30S ribosomal protein S3 [Achromobacter piechaudii ATCC 43553] gi|311109606|ref|YP_003982459.1| 30S ribosomal protein S3 [Achromobacter xylosoxidans A8] gi|292819001|gb|EFF78039.1| 30S ribosomal protein S3 [Achromobacter piechaudii ATCC 43553] gi|310764295|gb|ADP19744.1| ribosomal protein S3 [Achromobacter xylosoxidans A8] Length = 264 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 117/212 (55%), Positives = 160/212 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRWFA +G +L ED+++REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGTMLAEDIRVREYLKKKLKSASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYGT+ A T YG GIKV+V D +++ + Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGE 212 >gi|89095531|ref|ZP_01168436.1| 30S ribosomal protein S3 [Oceanospirillum sp. MED92] gi|89080206|gb|EAR59473.1| 30S ribosomal protein S3 [Oceanospirillum sp. MED92] Length = 226 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A SEY + L DL++REYL L++A V++I IER Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADKSEYASKLQNDLQVREYLDKQLEKASVSRIEIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE++A L+AQ + Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRNTVSEMMGVPVHINIEEIRKPELDARLVAQGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKIQLGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T A T YG G+KV++ + E+ + A ++ +K Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIF-KGEILGGIEQVRAEKNAPKKKG 225 >gi|238061115|ref|ZP_04605824.1| 30S ribosomal protein S3 [Micromonospora sp. ATCC 39149] gi|237882926|gb|EEP71754.1| 30S ribosomal protein S3 [Micromonospora sp. ATCC 39149] Length = 288 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A+I+YG A T +G G+KV++ D V ++ A E+ Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226 >gi|320529802|ref|ZP_08030879.1| ribosomal protein S3 [Selenomonas artemidis F0399] gi|320137820|gb|EFW29725.1| ribosomal protein S3 [Selenomonas artemidis F0399] Length = 223 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+ Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L +T+ + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTDKRVDINIAEIKQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYGTA A T YG GIKV++ + + D AA+ R Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKQQPKAAKERS 221 >gi|289811445|ref|ZP_06542074.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 212 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 110/210 (52%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210 >gi|119773360|ref|YP_926100.1| 30S ribosomal protein S3 [Shewanella amazonensis SB2B] gi|152060903|sp|A1S224|RS3_SHEAM RecName: Full=30S ribosomal protein S3 gi|119765860|gb|ABL98430.1| SSU ribosomal protein S3P [Shewanella amazonensis SB2B] Length = 230 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 159/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y LH D ++R++L+ L+ A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLHSDWEVRKFLEKKLEAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +++ ++ + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAEVAKISGTPAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ + T YG GIKV+V + + + + + ++ Sbjct: 181 DIDYATSESHTTYGVIGIKVWVFKGEVLDGMLPQVEEPKQQQPKRK 226 >gi|197287074|ref|YP_002152946.1| 30S ribosomal protein S3 [Proteus mirabilis HI4320] gi|227354928|ref|ZP_03839342.1| 30S ribosomal protein S3 [Proteus mirabilis ATCC 29906] gi|194684561|emb|CAR46389.1| 30S ribosomal protein S3 [Proteus mirabilis HI4320] gi|227165010|gb|EEI49849.1| 30S ribosomal protein S3 [Proteus mirabilis ATCC 29906] Length = 233 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 159/230 (69%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYAGTNEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKNVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|113460214|ref|YP_718271.1| 30S ribosomal protein S3 [Haemophilus somnus 129PT] gi|170718252|ref|YP_001785272.1| 30S ribosomal protein S3 [Haemophilus somnus 2336] gi|123131900|sp|Q0I157|RS3_HAES1 RecName: Full=30S ribosomal protein S3 gi|112822257|gb|ABI24346.1| SSU ribosomal protein S3P [Haemophilus somnus 129PT] gi|168826381|gb|ACA31752.1| ribosomal protein S3 [Haemophilus somnus 2336] Length = 235 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 107/223 (47%), Positives = 150/223 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER Sbjct: 1 MGQKVHPHGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRQFLNKELANASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVAGSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY T+ A T YG G+KV++ + + + E + Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPA 223 >gi|108809248|ref|YP_653164.1| 30S ribosomal protein S3 [Yersinia pestis Antiqua] gi|167398347|ref|ZP_02303871.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|123372094|sp|Q1C2V3|RS3_YERPA RecName: Full=30S ribosomal protein S3 gi|108781161|gb|ABG15219.1| SSU ribosomal protein S3P [Yersinia pestis Antiqua] gi|167050851|gb|EDR62259.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 232 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ISQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229 >gi|237806881|ref|YP_002891321.1| 30S ribosomal protein S3 [Tolumonas auensis DSM 9187] gi|237499142|gb|ACQ91735.1| ribosomal protein S3 [Tolumonas auensis DSM 9187] Length = 238 Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 153/210 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +NS W+A E+ LH D ++R+YL LK A +++I+IER Sbjct: 1 MGQKVHPNGIRLGITKPFNSTWYANTKEFADNLHGDFQVRQYLTKELKAASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK+++++ +++ EV KPE+++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKQIASIAGVPAQINIAEVRKPELDSQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210 >gi|84515640|ref|ZP_01003001.1| 30S ribosomal protein S3 [Loktanella vestfoldensis SKA53] gi|84510082|gb|EAQ06538.1| 30S ribosomal protein S3 [Loktanella vestfoldensis SKA53] Length = 238 Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 127/227 (55%), Positives = 170/227 (74%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RL VN TW+SRWFA EYG LL EDLKI+ +++ Q+GV++++IER Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWFANTREYGDLLLEDLKIKAFIRKECAQSGVSRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ +++ARPG+IIGKKG DIE +R+KL+N+T SE+HL++ EV KPE++A L+A+SI Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIEGLRQKLANLTKSELHLNIVEVRKPELDAALVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 GQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A T YG GIKV++ + E+ + D +H +++ + Sbjct: 181 DIDYALFEAMTPYGIIGIKVFIY-KGEIMEHDPQGHDRKHAELQEGA 226 >gi|124514437|gb|EAY55950.1| ribosomal protein S3 [Leptospirillum rubarum] Length = 226 Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 115/227 (50%), Positives = 162/227 (71%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG TW+SRW+A+ + LLHEDLKIR+ ++ L AG+AKI IERT Sbjct: 1 MGQKVHPIGFRLGYIKTWSSRWYAQ-KGFADLLHEDLKIRKMVKKKLFHAGIAKIEIERT 59 Query: 61 HKNC--RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 K+ RI +++ARPGLIIGKKG +IEK++ +L T S + +++ E+ KPE+ A LIA+ Sbjct: 60 GKDALARISIHTARPGLIIGKKGLEIEKLKSELEETTKSHVSINIKEIKKPELEAQLIAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 S+A QLE+R+ +RRAMK++V SA+RFGA GVK+ +GRL G+E++RTE Y EGRVPL TL Sbjct: 120 SVASQLEKRISYRRAMKKSVSSALRFGALGVKICCAGRLGGSEIARTEWYREGRVPLHTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA ID+G A A T +G G+KV+V + + + + + R + Sbjct: 180 RADIDFGFAEASTTFGKIGVKVWVYRGEILPGQEEVLSKPKERRGRQ 226 >gi|222056699|ref|YP_002539061.1| ribosomal protein S3 [Geobacter sp. FRC-32] gi|254764532|sp|B9M6H2|RS3_GEOSF RecName: Full=30S ribosomal protein S3 gi|221565988|gb|ACM21960.1| ribosomal protein S3 [Geobacter sp. FRC-32] Length = 210 Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 114/211 (54%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV TW+S+W+A ++ LLHEDLK++ +L+ L +GV+KI IER Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDFAKLLHEDLKLKSFLKKRLYHSGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L++++I Sbjct: 60 AGKAKINIYTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVSENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSGK 210 >gi|222109499|ref|YP_002551763.1| 30S ribosomal protein s3 [Acidovorax ebreus TPSY] gi|221728943|gb|ACM31763.1| ribosomal protein S3 [Acidovorax ebreus TPSY] Length = 288 Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A+T YG G+KV+V D + +D +PAAE Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217 >gi|241765223|ref|ZP_04763206.1| ribosomal protein S3 [Acidovorax delafieldii 2AN] gi|241365103|gb|EER59982.1| ribosomal protein S3 [Acidovorax delafieldii 2AN] Length = 293 Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A+T YG G+KV+V D + +D +PA E Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVE 217 >gi|332041529|gb|EGI77889.1| 30S ribosomal protein S3 [Hylemonella gracilis ATCC 19624] Length = 296 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 118/220 (53%), Positives = 159/220 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKTKLKNASVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE +++ L + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKRDLGKQLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYGT+ A+T YG G+KV+V D + ++ Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDNLGRNEQPATTEPR 220 >gi|114778818|ref|ZP_01453625.1| 30S ribosomal protein S3 [Mariprofundus ferrooxydans PV-1] gi|114550949|gb|EAU53513.1| 30S ribosomal protein S3 [Mariprofundus ferrooxydans PV-1] Length = 216 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 108/210 (51%), Positives = 151/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FR+GV W S W+A +GA L ED+K+R +++ LK AGV++I+IER Sbjct: 1 MGQKVNPIGFRVGVIRNWESVWYASDKNFGAQLREDIKLRRHVKERLKHAGVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V+++RPG++IGKKG++I+ +R +L E+ + + EV +PE A L+A+++ Sbjct: 61 ADKIKVTVHTSRPGVVIGKKGSEIDAVRNELVREFGQEVQVFIVEVRRPEAEAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERRV FRRAMKRAVQSAMR GA GV++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AFQMERRVAFRRAMKRAVQSAMRMGAKGVRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 +DYG A A T YG G+KV+V ++ D Sbjct: 181 DVDYGFAEAHTTYGVIGVKVWVFNGIKLGD 210 >gi|121592718|ref|YP_984614.1| 30S ribosomal protein S3 [Acidovorax sp. JS42] gi|152060839|sp|A1W2R3|RS3_ACISJ RecName: Full=30S ribosomal protein S3 gi|120604798|gb|ABM40538.1| SSU ribosomal protein S3P [Acidovorax sp. JS42] Length = 288 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER Sbjct: 1 MGQKIHPTGFRLSVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGT+ A+T YG G+KV+V D + +D +PAAE Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217 >gi|206602681|gb|EDZ39162.1| Ribosomal protein S3 [Leptospirillum sp. Group II '5-way CG'] Length = 226 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 115/227 (50%), Positives = 161/227 (70%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG TW+SRW+A+ + LLHEDLKIR+ ++ L AG+AKI IERT Sbjct: 1 MGQKVHPIGFRLGYIKTWSSRWYAQ-KGFADLLHEDLKIRKMVKKKLFHAGIAKIEIERT 59 Query: 61 HKNC--RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 K+ RI +++ARPGLIIGKKG +IEK++ +L T S + +++ E+ KPE+ A LIA+ Sbjct: 60 GKDALARISIHTARPGLIIGKKGLEIEKLKSELEETTKSHVSINIKEIKKPELEAQLIAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 S+A QLE+R+ +RRAMK++V SA+RFGA GVK+ +GRL G+E++RTE Y EGRVPL TL Sbjct: 120 SVASQLEKRISYRRAMKKSVSSALRFGALGVKICCAGRLGGSEIARTEWYREGRVPLHTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA ID+G A A T +G G+KV+V + + + + R + Sbjct: 180 RADIDFGFAEASTTFGKIGVKVWVYRGEILPGQEEVASKPKERRGRQ 226 >gi|134096315|ref|YP_001101390.1| 30S ribosomal protein S3 [Herminiimonas arsenicoxydans] gi|189045012|sp|A4G9T2|RS3_HERAR RecName: Full=30S ribosomal protein S3 gi|133740218|emb|CAL63269.1| 30S ribosomal protein S3 [Herminiimonas arsenicoxydans] Length = 283 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 118/225 (52%), Positives = 159/225 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRW+A S + +L+EDLK+R YL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLSVTRNWASRWYAGNSNFATMLNEDLKVRAYLKTKLKNASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ L+ M +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALTKMMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG AET YG GIKV+V D + + + + ++ Sbjct: 181 EIDYGFGEAETTYGIIGIKVWVYKGDRLPSGEPPVDLTKEDDTKR 225 >gi|209521379|ref|ZP_03270092.1| ribosomal protein S3 [Burkholderia sp. H160] gi|209498199|gb|EDZ98341.1| ribosomal protein S3 [Burkholderia sp. H160] Length = 268 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229 >gi|167587766|ref|ZP_02380154.1| 30S ribosomal protein S3 [Burkholderia ubonensis Bu] Length = 266 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLKEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229 >gi|317050534|ref|YP_004111650.1| 30S ribosomal protein S3 [Desulfurispirillum indicum S5] gi|316945618|gb|ADU65094.1| ribosomal protein S3 [Desulfurispirillum indicum S5] Length = 230 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 157/227 (69%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TWNS+W+A +Y LHEDL+I ++L+ L AG++++ IER Sbjct: 1 MGQKVHPTGLRLGIIKTWNSKWYAN-KDYADFLHEDLRIEKHLRKELYHAGISRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGKKG +IEK+RK LS+MT I ++V EV KPE++A L+A+++ Sbjct: 60 PGKVNITLHTARPGIVIGKKGAEIEKVRKSLSDMTKKNIFVNVKEVKKPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+AV M+ G +G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AMQLERRVAFRRAMKKAVGMTMKMGGEGIRIACAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG G+KV++S + + S +++ Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWMSHGEILDTSKKAQKVEAAAGATREA 226 >gi|145300929|ref|YP_001143770.1| ribosomal protein S3 [Aeromonas salmonicida subsp. salmonicida A449] gi|152060842|sp|A4ST00|RS3_AERS4 RecName: Full=30S ribosomal protein S3 gi|142853701|gb|ABO92022.1| ribosomal protein S3 [Aeromonas salmonicida subsp. salmonicida A449] Length = 236 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 108/210 (51%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ +T ++++EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVAVITGVPAQINISEVRKPELDGKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210 >gi|300721371|ref|YP_003710642.1| 30S ribosomal subunit protein S3 [Xenorhabdus nematophila ATCC 19061] gi|297627859|emb|CBJ88405.1| 30S ribosomal subunit protein S3 [Xenorhabdus nematophila ATCC 19061] Length = 224 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 154/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELVKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKAVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAV +AMR GA G+K SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVHNAMRLGAKGIKEEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY T+ A T YG G+KV++ + E+ + + AE Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQAEK 219 >gi|296163315|ref|ZP_06846076.1| ribosomal protein S3 [Burkholderia sp. Ch1-1] gi|295886454|gb|EFG66311.1| ribosomal protein S3 [Burkholderia sp. Ch1-1] Length = 268 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229 >gi|187925610|ref|YP_001897252.1| 30S ribosomal protein S3 [Burkholderia phytofirmans PsJN] gi|295677926|ref|YP_003606450.1| ribosomal protein S3 [Burkholderia sp. CCGE1002] gi|307731249|ref|YP_003908473.1| 30S ribosomal protein S3 [Burkholderia sp. CCGE1003] gi|323527596|ref|YP_004229749.1| 30S ribosomal protein S3 [Burkholderia sp. CCGE1001] gi|226697677|sp|B2T745|RS3_BURPP RecName: Full=30S ribosomal protein S3 gi|187716804|gb|ACD18028.1| ribosomal protein S3 [Burkholderia phytofirmans PsJN] gi|295437769|gb|ADG16939.1| ribosomal protein S3 [Burkholderia sp. CCGE1002] gi|307585784|gb|ADN59182.1| ribosomal protein S3 [Burkholderia sp. CCGE1003] gi|323384598|gb|ADX56689.1| ribosomal protein S3 [Burkholderia sp. CCGE1001] Length = 268 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229 >gi|153004779|ref|YP_001379104.1| ribosomal protein S3 [Anaeromyxobacter sp. Fw109-5] gi|189044983|sp|A7HBM4|RS3_ANADF RecName: Full=30S ribosomal protein S3 gi|152028352|gb|ABS26120.1| ribosomal protein S3 [Anaeromyxobacter sp. Fw109-5] Length = 224 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 111/218 (50%), Positives = 157/218 (72%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV +W+S+W+ Y LHED+ +REY++ L QAG+++I IER Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIHLREYVKEKLGQAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V++ARPG++IGK+G IE I+K+L T++E++L+V EV K E +A L+A++I Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKELQGKTDNEVYLNVVEVRKAETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A+T YG G KV++ + + S S P Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLPQSASARPPR 217 >gi|21241743|ref|NP_641325.1| 30S ribosomal protein S3 [Xanthomonas axonopodis pv. citri str. 306] gi|294627847|ref|ZP_06706426.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664000|ref|ZP_06729414.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|27734501|sp|Q8PNR9|RS3_XANAC RecName: Full=30S ribosomal protein S3 gi|21107114|gb|AAM35861.1| 30S ribosomal protein S3 [Xanthomonas axonopodis pv. citri str. 306] gi|292597761|gb|EFF41919.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606229|gb|EFF49466.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 244 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 156/208 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG+ WNS+W+A +E+ + L DLK+RE L+ L QAGV+KILIER Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKAEFASYLAADLKVREMLRKKLAQAGVSKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV++ + Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208 >gi|78046561|ref|YP_362736.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325925381|ref|ZP_08186783.1| SSU ribosomal protein S3P [Xanthomonas perforans 91-118] gi|91207850|sp|Q3BWX7|RS3_XANC5 RecName: Full=30S ribosomal protein S3 gi|78034991|emb|CAJ22636.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325544259|gb|EGD15640.1| SSU ribosomal protein S3P [Xanthomonas perforans 91-118] Length = 244 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 156/208 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG+ WNS+W+A +E+ + L DLK+RE L+ L QAGV+KILIER Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKAEFASYLAADLKVREMLRKKLAQAGVSKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSQLMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV++ + Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208 >gi|297618378|ref|YP_003703537.1| ribosomal protein S3 [Syntrophothermus lipocalidus DSM 12680] gi|297146215|gb|ADI02972.1| ribosomal protein S3 [Syntrophothermus lipocalidus DSM 12680] Length = 222 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 155/221 (70%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W+S+W+A +Y LLHED IR+Y++ + AG++K+ IERT Sbjct: 1 MGQKVHPKGLRIGIIRDWDSKWYAD-RDYTDLLHEDYHIRKYIKENFFAAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++A+PG+IIG+ GT++E++R+ L +T +++++ E+ KPE++A ++A+++ Sbjct: 60 GNRVRVSIHTAKPGIIIGRGGTEVERLRQDLGKLTGKTVNINIVEIKKPELDAQIVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERRV +RRAMK+AVQ MR GA+G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AAQIERRVAYRRAMKQAVQRTMRAGAEGIKIAVSGRLAGAEIARTEWYAEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A T YG GIK++++ + + + Sbjct: 180 DIDYGFAEAMTTYGKIGIKIWINRGEVLPAAKQPAKKTGEE 220 >gi|118496858|ref|YP_897908.1| 30S ribosomal protein S3 [Francisella tularensis subsp. novicida U112] gi|152060861|sp|A0Q4I9|RS3_FRATN RecName: Full=30S ribosomal protein S3 gi|118422764|gb|ABK89154.1| 30S ribosomal protein S3 [Francisella novicida U112] gi|328675413|gb|AEB28088.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida 3523] gi|328676327|gb|AEB27197.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida Fx1] Length = 223 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSSYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+ Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY TA A T YG G+KV++ + + AE + +K + Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222 >gi|300022547|ref|YP_003755158.1| ribosomal protein S3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524368|gb|ADJ22837.1| ribosomal protein S3 [Hyphomicrobium denitrificans ATCC 51888] Length = 275 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 126/226 (55%), Positives = 170/226 (75%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+N TW+SRWFA EYG LLHED IR ++ ++AG++K++IER Sbjct: 1 MGQKVNPVGLRVGINRTWDSRWFAARGEYGKLLHEDRAIRNHIMKEQREAGISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK CR+ V +ARPG++IGKKG IE++R L+ +T+SE+HL++ E+ KPEI+ATLIA+ I Sbjct: 61 HKKCRVTVQTARPGILIGKKGEKIERLRADLAKLTSSEVHLNILEIRKPEIDATLIAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKRAVQSA+R GA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRAVQSALRLGAIGIRINVAGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 ID+G VA TAYG GIKV+V + E+ + D + +++ Sbjct: 181 DIDFGYGVARTAYGIIGIKVWVF-KGEIIEHDPMAADKKLAEMQES 225 >gi|212637960|ref|YP_002314480.1| 30S ribosomal protein S3 [Anoxybacillus flavithermus WK1] gi|226697662|sp|B7GJ73|RS3_ANOFW RecName: Full=30S ribosomal protein S3 gi|212559440|gb|ACJ32495.1| Ribosomal protein S3 [Anoxybacillus flavithermus WK1] Length = 218 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 104/216 (48%), Positives = 149/216 (68%), Gaps = 1/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W SRW+A +Y LLHEDLKIREYL L A V++I IER Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKIREYLTKRLSDAAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP++ A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIVEIKKPDLEAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E RV FRRA K+A+Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQIENRVSFRRAQKQAIQRTMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY TA A+T YG G+KV++ + + T Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKTEE 215 >gi|91785459|ref|YP_560665.1| 30S ribosomal protein S3 [Burkholderia xenovorans LB400] gi|122970104|sp|Q13TH6|RS3_BURXL RecName: Full=30S ribosomal protein S3 gi|91689413|gb|ABE32613.1| SSU ribosomal protein S3P [Burkholderia xenovorans LB400] Length = 268 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 117/229 (51%), Positives = 165/229 (72%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKSELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + AE + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229 >gi|325921487|ref|ZP_08183342.1| SSU ribosomal protein S3P [Xanthomonas gardneri ATCC 19865] gi|325548034|gb|EGD19033.1| SSU ribosomal protein S3P [Xanthomonas gardneri ATCC 19865] Length = 244 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 115/208 (55%), Positives = 155/208 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG+ WNS+W+A +++ L DLK+RE L+ L QAG++KILIER Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKADFAGYLAADLKVREMLRKKLAQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSAMMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV++ + Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208 >gi|313888812|ref|ZP_07822473.1| ribosomal protein S3 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845181|gb|EFR32581.1| ribosomal protein S3 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 251 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 94/214 (43%), Positives = 147/214 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + LL ED IR+Y++ L AG+AKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYADKKNFADLLVEDNNIRKYVKKKLYAAGIAKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IG+ G +E++R ++ +T+ + ++V E+ P+++A ++A+ I Sbjct: 61 ANRVKISIHTAKPGMVIGRGGAGVEELRTEIEKLTDKSVVINVEEIKNPDLDAQIVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERRV FRRAMK+A+Q MR GA G+K +GR+ GA+++RTE Y EG +PLQTLRA Sbjct: 121 AEALERRVAFRRAMKQAIQRTMRQGALGIKTSVAGRVGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A+T YG G+KV++ + + + + Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPEIEDE 214 >gi|77918321|ref|YP_356136.1| 30S ribosomal protein S3 [Pelobacter carbinolicus DSM 2380] gi|91207825|sp|Q3A6P1|RS3_PELCD RecName: Full=30S ribosomal protein S3 gi|77544404|gb|ABA87966.1| SSU ribosomal protein S3P [Pelobacter carbinolicus DSM 2380] Length = 210 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 120/211 (56%), Positives = 159/211 (75%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV TW+SRW+A G EY LLHED+K+R YL+ L AGVAKI +ER Sbjct: 1 MGQKVHPIGFRLGVVKTWSSRWYAEG-EYSQLLHEDIKLRNYLKKRLYHAGVAKIELERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I VY+ARPG+IIGKKG ++E ++K L+ +T+ E+ +++ EV KPEI+A L+A+++ Sbjct: 60 ASKAKINVYAARPGIIIGKKGAEVEALKKDLARLTDKEVFINIQEVRKPEIDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V A++FGA G+K+ SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ATQLERRVAFRRAMKKSVSMALKFGAQGIKITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSQD 210 >gi|310659496|ref|YP_003937217.1| 30S ribosomal protein S3 [Clostridium sticklandii DSM 519] gi|308826274|emb|CBH22312.1| 30S ribosomal subunit protein S3 [Clostridium sticklandii] Length = 263 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 106/232 (45%), Positives = 156/232 (67%), Gaps = 7/232 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+N W+S+WFA ++ A L ED KIR+ L+ L +G+ KI IER+ Sbjct: 1 MGQKVNPHGLRVGINKDWDSKWFANKGDFAAFLQEDFKIRKVLKKKLYLSGIPKIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IGK G IE+I+ ++ MT ++ +++ EV +PE+++ L+A++I Sbjct: 61 GNKVKLNIFTAKPGMVIGKGGQGIEEIKSEVEKMTGKQVFVNILEVKRPEMDSQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+A+Q AMR GA G+KV SGRL GAE++RTE Y EG VPL TLRA Sbjct: 121 ALALERRVAFRRAMKQAMQRAMRSGAKGIKVSTSGRLGGAEMARTEGYSEGNVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-------DSTIPAAEHRVVEK 225 IDYG A A+T YG G+KV++ + + DS +P E + + Sbjct: 181 DIDYGFAEADTTYGKLGVKVWICKGEILPTRKGPKRELDSVMPKEEKKKPRR 232 >gi|190572950|ref|YP_001970795.1| 30S ribosomal protein S3 [Stenotrophomonas maltophilia K279a] gi|194364540|ref|YP_002027150.1| 30S ribosomal protein S3 [Stenotrophomonas maltophilia R551-3] gi|254521448|ref|ZP_05133503.1| ribosomal protein S3 [Stenotrophomonas sp. SKA14] gi|190010872|emb|CAQ44481.1| putative 30S ribosomal protein S3 [Stenotrophomonas maltophilia K279a] gi|194347344|gb|ACF50467.1| ribosomal protein S3 [Stenotrophomonas maltophilia R551-3] gi|219719039|gb|EED37564.1| ribosomal protein S3 [Stenotrophomonas sp. SKA14] Length = 244 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 120/232 (51%), Positives = 162/232 (69%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++PI RLG++ WNS+W+A +E+ L DLK+RE L+ L QAG++KILIER Sbjct: 1 MGHKVHPIGIRLGISKDWNSKWYANKAEFAGYLAADLKVREMLRKKLAQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVGGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A+T YG GIKV++ + + P+ R D Sbjct: 181 DIDYGFAEAKTTYGIIGIKVWIYKGEVFDFSQVGQEKQDDTPSRNDRHDRGD 232 >gi|187932137|ref|YP_001892122.1| 30S ribosomal protein S3 [Francisella tularensis subsp. mediasiatica FSC147] gi|226697715|sp|B2SDX9|RS3_FRATM RecName: Full=30S ribosomal protein S3 gi|187713046|gb|ACD31343.1| 30S ribosomal protein S3 [Francisella tularensis subsp. mediasiatica FSC147] Length = 223 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+ Sbjct: 61 AQNAKITIHTARPGIVIGKKGDDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY TA A T YG G+KV++ + + AE + +K + Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222 >gi|310644196|ref|YP_003948955.1| 30S ribosomal protein s3 [Paenibacillus polymyxa SC2] gi|309249147|gb|ADO58714.1| 30S ribosomal protein S3 [Paenibacillus polymyxa SC2] Length = 221 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 154/219 (70%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIRE+L+ LK + V+++ IER Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREHLKKRLKDSAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV FRRA+K+A+Q MR GA G+K GRL GAE++R+E Y EG VPL TLR Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYGTA A T YG G+KV++ + + + P Sbjct: 180 ADIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQE 218 >gi|94266247|ref|ZP_01289954.1| ribosomal protein S3 [delta proteobacterium MLMS-1] gi|93453173|gb|EAT03637.1| ribosomal protein S3 [delta proteobacterium MLMS-1] Length = 219 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 150/227 (66%), Gaps = 9/227 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL + TW+S W+A +Y ED +R+YL+ L AGV++I I RT Sbjct: 1 MGQKVNPIGLRLNIVRTWDSIWYAD-RDYARNFLEDQSLRKYLKKRLYHAGVSRIQIART 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IGKKG +I+ ++ L T L + EV +PE +A L+A+++ Sbjct: 60 GDKIRVRLHTARPGVVIGKKGAEIDVLKNDLERRTGRSCALDIQEVRRPEADAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMK+A+ A++FGA GV++ SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AQQLERRIAFRRAMKKAINMALKFGAKGVRIACSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG G+KV++ + +S+ E R E+ + Sbjct: 180 DIDYGLAEAKTTYGVIGVKVWIFKGEVLSE--------EDRRPEEQA 218 >gi|89053082|ref|YP_508533.1| 30S ribosomal protein S3 [Jannaschia sp. CCS1] gi|123401403|sp|Q28UV4|RS3_JANSC RecName: Full=30S ribosomal protein S3 gi|88862631|gb|ABD53508.1| SSU ribosomal protein S3P [Jannaschia sp. CCS1] Length = 247 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 128/238 (53%), Positives = 172/238 (72%), Gaps = 13/238 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL------------K 48 MG K+NPI RL VN TW+SRW+A +YG LL ED+KIR+Y++ Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIRDYIKKGWWEHVAKRDKRPAG 60 Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108 AG++KI+IER HK CR+ ++SARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ E+ K Sbjct: 61 DAGISKIIIERPHKKCRVTIHSARPGVIIGKKGADIEGLRKKLAEITDSELHLNIVEIRK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 PE++A L+A+SIAQQLERRV FRRAMKRAVQ+AMR G+ G++V +GRL GAE++RTE Y Sbjct: 121 PELDARLVAESIAQQLERRVSFRRAMKRAVQNAMRMGSLGIRVNVAGRLGGAEIARTEWY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 EGRVPL TLRA IDY A AETAYG GIK ++ + E+ + D + + +++ Sbjct: 181 REGRVPLHTLRADIDYAHAEAETAYGIIGIKTWIF-KGEIMEHDPSAHDRRQQELQES 237 >gi|315501427|ref|YP_004080314.1| ribosomal protein s3 [Micromonospora sp. L5] gi|315408046|gb|ADU06163.1| ribosomal protein S3 [Micromonospora sp. L5] Length = 295 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPACKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A+I+YG A T +G G+KV++ D V ++ AA Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGREAPAEAAP 219 >gi|255659509|ref|ZP_05404918.1| ribosomal protein S3 [Mitsuokella multacida DSM 20544] gi|260848061|gb|EEX68068.1| ribosomal protein S3 [Mitsuokella multacida DSM 20544] Length = 222 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ TW+++W+A ++ LHED+KIR+YL+ L+ AGV++I ER+ Sbjct: 1 MGQKVNPHGIRLGIVKTWDAKWYAD-KDFADNLHEDIKIRDYLKNSLQAAGVSRIETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L N T + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNYTTKRVDINIAEIKQPDMDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AQQLERRIAFRRAMKQAVGRTMRLGAKGIKIACSGRLGGAEIARKESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A T YG GIKV++ + + + AAE Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPERKQAKTAAE 218 >gi|118473160|ref|YP_885825.1| 30S ribosomal protein S3 [Mycobacterium smegmatis str. MC2 155] gi|152060880|sp|A0QSD7|RS3_MYCS2 RecName: Full=30S ribosomal protein S3 gi|118174447|gb|ABK75343.1| ribosomal protein S3 [Mycobacterium smegmatis str. MC2 155] Length = 275 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 148/228 (64%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTEWKSRWYAD-KQYKDYVKEDVAIRKLLATGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE--HRVVEK 225 A IDYG A+T +G G+KV++ D V AA R + Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAAPASDRPRRE 227 >gi|118465225|ref|YP_883600.1| 30S ribosomal protein S3 [Mycobacterium avium 104] gi|152060876|sp|A0QL12|RS3_MYCA1 RecName: Full=30S ribosomal protein S3 gi|118166512|gb|ABK67409.1| ribosomal protein S3 [Mycobacterium avium 104] Length = 280 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214 >gi|145596428|ref|YP_001160725.1| ribosomal protein S3 [Salinispora tropica CNB-440] gi|189045333|sp|A4XBP0|RS3_SALTO RecName: Full=30S ribosomal protein S3 gi|145305765|gb|ABP56347.1| SSU ribosomal protein S3P [Salinispora tropica CNB-440] Length = 288 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYVGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR KL +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGKLEKLTGKQVQLNIIEVKSPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A+I+YG A T +G G+KV++ D V ++ A E+ Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226 >gi|238928149|ref|ZP_04659909.1| 30S ribosomal protein s3 [Selenomonas flueggei ATCC 43531] gi|238884109|gb|EEQ47747.1| 30S ribosomal protein s3 [Selenomonas flueggei ATCC 43531] Length = 223 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 101/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W++RW+A + LHED+KIR+YL+ L+ AGV ++ ER+ Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KNFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L N+T+ + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNLTDKRVDINIAEIKQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYGTA A T YG GIKV++ + + D + + R Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKNQPKNGKERS 221 >gi|21230370|ref|NP_636287.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769636|ref|YP_244398.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris str. 8004] gi|188992848|ref|YP_001904858.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris str. B100] gi|27734500|sp|Q8PC44|RS3_XANCP RecName: Full=30S ribosomal protein S3 gi|81304409|sp|Q4URE5|RS3_XANC8 RecName: Full=30S ribosomal protein S3 gi|21111926|gb|AAM40211.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574968|gb|AAY50378.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris str. 8004] gi|167734608|emb|CAP52818.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris] Length = 244 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 156/208 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG+ WNS+W+A +++ A L DLK+RE L+ L QAG++KILIER Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYASKADFAAYLAADLKVREMLRKKLAQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV++ + Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208 >gi|118595329|ref|ZP_01552676.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181] gi|118441107|gb|EAV47734.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181] Length = 292 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 122/226 (53%), Positives = 164/226 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLGV W+S+W++ + +LL D+K+RE+L L A V++I+IER Sbjct: 1 MGQKINPIGFRLGVTKDWSSKWYSNSKNFASLLQNDIKVREFLNKKLANAAVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I +YSARPG++IGKKG DIE +R L ++ + L++ E+ KPE++ATLIAQSI Sbjct: 61 AKNAKITIYSARPGIVIGKKGEDIETLRSSLQSLMGIPVQLNIEEIRKPEVDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA GVK+++SGRLNG E++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGVKIMSSGRLNGIEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A+T YG GIKV++ + + T+ V E+ Sbjct: 181 DIDYGVARAQTTYGIIGIKVWIFKGERFEEPAKTVNLDNKEVAEEK 226 >gi|302869966|ref|YP_003838603.1| 30S ribosomal protein S3 [Micromonospora aurantiaca ATCC 27029] gi|302572825|gb|ADL49027.1| ribosomal protein S3 [Micromonospora aurantiaca ATCC 27029] Length = 295 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPACKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A+I+YG A T +G G+KV++ D V ++ AA Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGREAPAEAAP 219 >gi|89255676|ref|YP_513037.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica LVS] gi|115314177|ref|YP_762900.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica OSU18] gi|134302579|ref|YP_001122550.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501626|ref|YP_001427691.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009883|ref|ZP_02274814.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica FSC200] gi|254368628|ref|ZP_04984643.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp. holarctica FSC022] gi|290953206|ref|ZP_06557827.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica URFT1] gi|295313574|ref|ZP_06804163.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica URFT1] gi|122325782|sp|Q0BNS1|RS3_FRATO RecName: Full=30S ribosomal protein S3 gi|123094541|sp|Q2A5G4|RS3_FRATH RecName: Full=30S ribosomal protein S3 gi|152060862|sp|A4IZS8|RS3_FRATW RecName: Full=30S ribosomal protein S3 gi|189045009|sp|A7N9T2|RS3_FRATF RecName: Full=30S ribosomal protein S3 gi|89143507|emb|CAJ78683.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica LVS] gi|115129076|gb|ABI82263.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica OSU18] gi|134050356|gb|ABO47427.1| ribosomal protein S3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156252229|gb|ABU60735.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121536|gb|EDO65721.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp. holarctica FSC022] Length = 223 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+ Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY TA A T YG G+KV++ + + AE + +K + Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222 >gi|269140565|ref|YP_003297266.1| 30S ribosomal protein S3 [Edwardsiella tarda EIB202] gi|267986226|gb|ACY86055.1| 30S ribosomal protein S3 [Edwardsiella tarda EIB202] gi|304560353|gb|ADM43017.1| SSU ribosomal protein S3p (S3e) [Edwardsiella tarda FL6-60] Length = 233 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 110/230 (47%), Positives = 156/230 (67%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R++L L++A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLNKELEKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVAEIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QL RRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLVRRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|313895402|ref|ZP_07828959.1| ribosomal protein S3 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976297|gb|EFR41755.1| ribosomal protein S3 [Selenomonas sp. oral taxon 137 str. F0430] Length = 223 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 155/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+ Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L +T+ + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTDKRVDINIAEIKQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYGTA A T YG GIKV++ + + D AA+ R Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKSEVLPDKKQQPKAAKERS 221 >gi|152993899|ref|YP_001359620.1| 30S ribosomal protein S3 [Sulfurovum sp. NBC37-1] gi|189045340|sp|A6QCQ4|RS3_SULNB RecName: Full=30S ribosomal protein S3 gi|151425760|dbj|BAF73263.1| 30S ribosomal protein S3 [Sulfurovum sp. NBC37-1] Length = 232 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 152/227 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + ED KIR++L+ L AGV+ I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAKERTADFIAEDYKIRKFLKKELFYAGVSNIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI + +ARPG+IIGKKG DIEK++ L M ++ +++ E +P+ + L A+++ Sbjct: 61 AKKLRINIITARPGIIIGKKGADIEKLKTTLVKMLGKDVAINIKEEKRPQASGQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A++ GA G+K+ SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVIQGALKSGAKGIKISVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A+T YG GIKV++ + ++ PA E + + S Sbjct: 181 KIDYGFAEAQTTYGIIGIKVWIFKGEVLAKGIQPEPAEEKKGGRRPS 227 >gi|23097580|ref|NP_691046.1| 30S ribosomal protein S3 [Oceanobacillus iheyensis HTE831] gi|27734493|sp|P59182|RS3_OCEIH RecName: Full=30S ribosomal protein S3 gi|22775803|dbj|BAC12081.1| 30S ribosomal protein S3 [Oceanobacillus iheyensis HTE831] Length = 213 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 105/211 (49%), Positives = 148/211 (70%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+G+ W S+W+A G +Y LLHED+KIREYL+ L A V+ I IER Sbjct: 1 MGQKINPTGLRVGIIKDWESKWYA-GKDYADLLHEDIKIREYLENRLSTAAVSSIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G+++E +RK L+N+T +H+++ E+ K +++ATL+A SI Sbjct: 60 ANRVNITIHTGKPGMVIGKGGSEVEALRKSLNNLTGKRVHINIVEIKKVDLDATLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQAIQRAMRGGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYGTA A+T YG G+KV++ + + Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTK 210 >gi|269104018|ref|ZP_06156715.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163916|gb|EEZ42412.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 232 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 109/230 (47%), Positives = 157/230 (68%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQDFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV---SDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG GIKV++ + + +++ P A+ ++ S Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIFKGEVLGGMPAANAVEPKADKPKKQRKS 230 >gi|149376678|ref|ZP_01894437.1| 30S ribosomal protein S3 [Marinobacter algicola DG893] gi|149359051|gb|EDM47516.1| 30S ribosomal protein S3 [Marinobacter algicola DG893] Length = 227 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 107/213 (50%), Positives = 155/213 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP RLGV NS W+A +EY L D+++RE+L L +A V+KI+IER Sbjct: 1 MGHKVNPTGMRLGVIKEHNSVWYAEKAEYANNLLNDIQVREFLDKRLVKASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++ Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY T A+T YG G+KV++ + + + Sbjct: 181 DIDYSTYEAKTTYGIIGVKVWIFKGEILGGMEQ 213 >gi|226939192|ref|YP_002794263.1| 30S ribosomal protein S3 [Laribacter hongkongensis HLHK9] gi|254764534|sp|C1DAS3|RS3_LARHH RecName: Full=30S ribosomal protein S3 gi|226714116|gb|ACO73254.1| RpsC [Laribacter hongkongensis HLHK9] Length = 233 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 115/226 (50%), Positives = 157/226 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+S+WFA + +L ED+ +RE+L+ LK A V++I IER Sbjct: 1 MGQKIDPRGFRLAVTRNWSSKWFANSQNFPGMLKEDIDVREFLKAKLKNASVSRITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +++ARPG++IGKKG DIE ++++L +H+++ EV KPEI+A +IA I Sbjct: 61 AKSARITIHTARPGVVIGKKGEDIEVLKQELQKRMGVPVHVNIEEVRKPEIDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY T+ A T YG GIKV+V D S P + + K Sbjct: 181 DVDYATSEAHTTYGVIGIKVWVYKGDMKPGQVSAEPTQPEKKMRKG 226 >gi|33357880|pdb|1P6G|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357957|pdb|1P87|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754041|pdb|2AVY|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754097|pdb|2AW7|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138055|pdb|2I2P|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138126|pdb|2I2U|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836025|pdb|2QOU|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836088|pdb|2QOW|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836129|pdb|2QOY|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836192|pdb|2QP0|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429700|pdb|2QAL|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429752|pdb|2QAN|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429810|pdb|2QB9|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429862|pdb|2QBB|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429914|pdb|2QBD|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429966|pdb|2QBF|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430020|pdb|2QBH|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430073|pdb|2QBJ|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431373|pdb|2Z4K|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431426|pdb|2Z4M|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988790|pdb|2VHO|C Chain C, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988811|pdb|2VHP|C Chain C, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107280|pdb|3DF1|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107332|pdb|3DF3|C Chain C, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|329665994|pdb|3J00|C Chain C, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 232 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 4/229 (1%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 60 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 120 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 180 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 IDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 229 >gi|85709051|ref|ZP_01040117.1| 30S ribosomal protein S3 [Erythrobacter sp. NAP1] gi|85690585|gb|EAQ30588.1| 30S ribosomal protein S3 [Erythrobacter sp. NAP1] Length = 231 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 127/225 (56%), Positives = 168/225 (74%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL +N TW+SRW+A G +Y LL ED+K+R+Y+ L QA ++K++IER Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGRDYAGLLAEDIKMRKYILESLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+R KLS MT+SE+ L++ E+ KPEI+A L+AQ + Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRAKLSTMTSSEVKLNIVEIRKPEIDAKLVAQGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRAVQSA+R GA+G+K++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKIVCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +IDY A TAYG GIKV++ + E+ D P A+ R++ + Sbjct: 181 NIDYAETEALTAYGIIGIKVWIF-KGEILAHD---PTAQDRLMME 221 >gi|108797992|ref|YP_638189.1| 30S ribosomal protein S3 [Mycobacterium sp. MCS] gi|119867088|ref|YP_937040.1| 30S ribosomal protein S3 [Mycobacterium sp. KMS] gi|126433654|ref|YP_001069345.1| 30S ribosomal protein S3 [Mycobacterium sp. JLS] gi|123070587|sp|Q1BDA1|RS3_MYCSS RecName: Full=30S ribosomal protein S3 gi|152060881|sp|A3PVC7|RS3_MYCSJ RecName: Full=30S ribosomal protein S3 gi|152060882|sp|A1UBP2|RS3_MYCSK RecName: Full=30S ribosomal protein S3 gi|108768411|gb|ABG07133.1| SSU ribosomal protein S3P [Mycobacterium sp. MCS] gi|119693177|gb|ABL90250.1| SSU ribosomal protein S3P [Mycobacterium sp. KMS] gi|126233454|gb|ABN96854.1| SSU ribosomal protein S3P [Mycobacterium sp. JLS] Length = 287 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYKDYVKEDVAIRRLLATGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESVAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225 A IDYG A+T +G G+KV++ D V PA R + Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELTAAAPAGADRPRRE 228 >gi|152964663|ref|YP_001360447.1| ribosomal protein S3 [Kineococcus radiotolerans SRS30216] gi|189045014|sp|A6W5U4|RS3_KINRD RecName: Full=30S ribosomal protein S3 gi|151359180|gb|ABS02183.1| ribosomal protein S3 [Kineococcus radiotolerans SRS30216] Length = 282 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 4/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+ IR + +++AG++K+ Sbjct: 1 MGQKVNPFGFRLGITTDHRSRWFADSTKTGQRYADYVKEDVAIRRLMSKGMERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRTELEKLTGKQVQLNILEVKNPEVDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAM++ +Q+ MR GA G++V +GRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLASRVSFRRAMRKGMQTTMRSGAKGIRVQCAGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 TLRA+IDYG A T +G G+KV++ D S + AA R + Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYHGDITSRELAQSQAAAPRAPRR 229 >gi|146328784|ref|YP_001210145.1| 30S ribosomal protein S3 [Dichelobacter nodosus VCS1703A] gi|172047328|sp|A5EX93|RS3_DICNV RecName: Full=30S ribosomal protein S3 gi|146232254|gb|ABQ13232.1| 30S ribosomal protein S3 [Dichelobacter nodosus VCS1703A] Length = 239 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 112/227 (49%), Positives = 157/227 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV+ W S+W+A G++Y L +D ++RE+L+ L A V+KI IER Sbjct: 1 MGQKIHPIGFRLGVSKDWTSKWYAEGTDYANYLEKDFEVREFLRKKLAHASVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPG++IGKKG DIE ++K++ + +++ E+ +PE+++ L+A +I Sbjct: 61 RNGAQITIFTARPGIVIGKKGEDIEILKKEVGKILGVATSINIEEIRRPELDSYLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERRV+FRRAMKRAV S MR GA GVKV SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AKQLERRVMFRRAMKRAVASTMRLGAVGVKVSISGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T YG G+KV++ + + ++ EK + Sbjct: 181 DIDYGLAEAYTTYGVIGVKVWIFKGENLEGLEADTSNTNELSDEKRN 227 >gi|37528537|ref|NP_931882.1| 30S ribosomal protein S3 [Photorhabdus luminescens subsp. laumondii TTO1] gi|61215674|sp|Q7MYF7|RS3_PHOLL RecName: Full=30S ribosomal protein S3 gi|36787975|emb|CAE17092.1| 30S ribosomal protein S3 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 233 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 109/230 (47%), Positives = 158/230 (68%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS W+A E+ L D K+R+YL+ L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLKKELAKASISRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINISEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERR++FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRIMFRRAMKRAVQNAMRQGAKGIKVEVSGRLGGAEIARPEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230 >gi|152998265|ref|YP_001343100.1| 30S ribosomal protein S3 [Marinomonas sp. MWYL1] gi|150839189|gb|ABR73165.1| ribosomal protein S3 [Marinomonas sp. MWYL1] Length = 226 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 152/226 (67%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y LL DL++R +L+ L QA V++I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRAFLEKKLVQASVSRIEIQRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE++A L+AQ+I Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRNAVSEMMGVPVHINIEEIRKPEMDAKLVAQNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA--AEHRVVE 224 IDY T A T YG G+KV++ + + + A+ + + Sbjct: 181 DIDYATYEAATTYGIIGVKVWIFKGEILGGIEQVRADKGAQKKKSK 226 >gi|260893366|ref|YP_003239463.1| ribosomal protein S3 [Ammonifex degensii KC4] gi|260865507|gb|ACX52613.1| ribosomal protein S3 [Ammonifex degensii KC4] Length = 220 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 146/211 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN++W+A ++ L ED+KIR +++ AGV+ I+IER Sbjct: 1 MGQKVDPRGLRLGIIRDWNAKWYAENKDFANFLLEDVKIRRHIKQKFYHAGVSNIVIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+ G ++E +R++L MT ++ +++ E+ PE++A L+A++I Sbjct: 61 ANRIRVTIHTARPGMVIGRGGAEVENLRRELEEMTGKQVSINIVEIKVPELDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERRV +RRAMK+A+ AMR GA G+KV SGRL GAE++RTE EGRVPL TLRA Sbjct: 121 ASQIERRVAYRRAMKQAIARAMRMGAKGIKVEVSGRLAGAEIARTEWLREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG G+KV++ D + Sbjct: 181 DIDYGFAEAITTYGKIGVKVWIYKGDVLPQR 211 >gi|157690906|ref|YP_001485368.1| 30S ribosomal protein S3 [Bacillus pumilus SAFR-032] gi|194017609|ref|ZP_03056220.1| ribosomal protein S3 [Bacillus pumilus ATCC 7061] gi|172045995|sp|A8F991|RS3_BACP2 RecName: Full=30S ribosomal protein S3 gi|157679664|gb|ABV60808.1| ribosomal protein S3 [Bacillus pumilus SAFR-032] gi|194010881|gb|EDW20452.1| ribosomal protein S3 [Bacillus pumilus ATCC 7061] Length = 218 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+WFA G +Y LHEDLKIRE++ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWFA-GKDYADFLHEDLKIREFISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+ +Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQTIQRTMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + +T + Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKNTAEGGK 218 >gi|304310022|ref|YP_003809620.1| 30S ribosomal protein S3 [gamma proteobacterium HdN1] gi|301795755|emb|CBL43954.1| 30S ribosomal protein S3 [gamma proteobacterium HdN1] Length = 227 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 156/223 (69%), Gaps = 2/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +S W+A +G L +D+K+REYL LK A V++I IER Sbjct: 1 MGQKVHPTGIRLGIVKKHSSTWYASPKNFGDYLLKDIKVREYLSEKLKAASVSRIEIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI + +ARPG++IGKKG D+EK+RK+++++ +H+++ E+ KPE++A L+A+ I Sbjct: 61 AENARITIKTARPGIVIGKKGEDVEKLRKEVASIMQVPVHINIEEIRKPELDAKLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQGTMRLGAKGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD--STIPAAEHR 221 IDY TA AET YGS G+KV++ + + + A R Sbjct: 181 DIDYATARAETTYGSIGVKVWIFKGEVLGGVEPVEDTKVAPKR 223 >gi|153869561|ref|ZP_01999135.1| 30S ribosomal protein S3 [Beggiatoa sp. PS] gi|152073947|gb|EDN70859.1| 30S ribosomal protein S3 [Beggiatoa sp. PS] Length = 211 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 109/209 (52%), Positives = 154/209 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ W+S+W+A +Y L+ DLK+R +++ L A V+++ IER Sbjct: 1 MGQKVHPIGMRLGIIKDWSSKWYANSQDYPVYLNTDLKVRAFIKKKLAPASVSEVRIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RII+++ARPG++IGKKG DI+K+R +S M +H+SV E+ KPE++A L+A S+ Sbjct: 61 ARNARIIIHTARPGIVIGKKGEDIDKLRAIVSKMMGIPVHISVEEIRKPELDAYLVAVSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR++FRRAMKR V +AMR GA G+++ SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRIMFRRAMKRVVGNAMRLGAQGIRINVSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G+KV++ + + Sbjct: 181 DIDYGFAEAQTTYGIIGVKVWIFKGEIIG 209 >gi|308070969|ref|YP_003872574.1| 30S ribosomal protein S3 [Paenibacillus polymyxa E681] gi|305860248|gb|ADM72036.1| 30S ribosomal protein S3 [Paenibacillus polymyxa E681] Length = 221 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 154/219 (70%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+W+A G ++G LL ED++IRE+L+ LK + V+++ IER Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVRIREHLKKRLKDSAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV FRRA+K+A+Q MR GA G+K GRL GAE++R+E Y EG VPL TLR Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYGTA A T YG G+KV++ + + + P Sbjct: 180 ADIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQE 218 >gi|317126867|ref|YP_004093149.1| ribosomal protein S3 [Bacillus cellulosilyticus DSM 2522] gi|315471815|gb|ADU28418.1| ribosomal protein S3 [Bacillus cellulosilyticus DSM 2522] Length = 219 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W S+W+A +Y LLHED+KIREYL+ LK+A ++ + IER Sbjct: 1 MGQKVNPTGLRVGIIKDWESKWYAD-KDYADLLHEDIKIREYLEKRLKEASLSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +Y+A+PG++IGK G+++E +RK L+ +T +H+++NEV P+++A L+A ++ Sbjct: 60 ANRVNVTIYTAKPGMVIGKGGSEVEALRKALNQLTGKRVHININEVKYPDMDARLVADNV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK+ +Q MR GA G+K SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAMKQVIQRTMRSGAKGIKTEVSGRLGGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYGTA A+T YG G+KV++ + + Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTK 210 >gi|238025938|ref|YP_002910169.1| 30S ribosomal protein S3 [Burkholderia glumae BGR1] gi|330815255|ref|YP_004358960.1| 30S ribosomal protein S3 [Burkholderia gladioli BSR3] gi|237875132|gb|ACR27465.1| 30S ribosomal protein S3 [Burkholderia glumae BGR1] gi|327367648|gb|AEA59004.1| 30S ribosomal protein S3 [Burkholderia gladioli BSR3] Length = 266 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 116/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + E + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229 >gi|323141362|ref|ZP_08076253.1| ribosomal protein S3 [Phascolarctobacterium sp. YIT 12067] gi|322414111|gb|EFY04939.1| ribosomal protein S3 [Phascolarctobacterium sp. YIT 12067] Length = 222 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A G +Y L ED+KIRE+++ L +G++K+ IER Sbjct: 1 MGQKVNPHGLRVGVIKGWDSKWYA-GKDYEKFLLEDIKIREFIKEKLFLSGISKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++A+PG++IG++G++IE ++ L MT S I +++ EV P+++ATL+A++I Sbjct: 60 SNKARISIHTAKPGMVIGRQGSNIELLKSDLKKMTESAIEINIVEVKTPDMDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ V MR GA G+K+ GRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQCVGRTMRMGAKGIKITCGGRLGGAEIARSESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDYGTA A T YG GIKV++ + + +S A + Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIYKGEVLPESKEAAKVAPAKEA 222 >gi|88801213|ref|ZP_01116754.1| ribosomal protein S3 [Reinekea sp. MED297] gi|88776051|gb|EAR07285.1| ribosomal protein S3 [Reinekea sp. MED297] Length = 228 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 159/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ NS W+A Y L D+++R YL+ L++A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYAGSDTYSEKLLNDIEVRAYLEKKLEKASVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+E +R++L+ M +H+++ E+ KP+++ L+AQSI Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVELLRQELTQMMGIPVHINIEEIRKPDLDGKLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRA+Q+AMR GA+G++V SGRL GAE++R+E YLEGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAMQNAMRGGAEGIRVQVSGRLGGAEIARSEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY TA A T YG G+KV++ + + + ++ + + Sbjct: 181 DIDYATAEANTTYGIIGVKVWIFKGEVLGGIEEVRAKSKAQPKKNS 226 >gi|167582617|ref|ZP_02375491.1| 30S ribosomal protein S3 [Burkholderia thailandensis TXDOH] gi|167838206|ref|ZP_02465065.1| 30S ribosomal protein S3 [Burkholderia thailandensis MSMB43] Length = 266 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + E + +++ Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229 >gi|119468274|ref|ZP_01611400.1| 30S ribosomal subunit protein S3 [Alteromonadales bacterium TW-7] gi|119448267|gb|EAW29531.1| 30S ribosomal subunit protein S3 [Alteromonadales bacterium TW-7] Length = 233 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 104/210 (49%), Positives = 149/210 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++ L D K+R +L LK A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSDQLFGDHKVRAFLTKELKTASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210 >gi|15827996|ref|NP_302259.1| 30S ribosomal protein S3 [Mycobacterium leprae TN] gi|3122828|sp|O32987|RS3_MYCLE RecName: Full=30S ribosomal protein S3 gi|2344838|emb|CAB11440.1| ribosomal protein S3 [Mycobacterium leprae] gi|13093549|emb|CAC30811.1| 30S ribosomal protein S3 [Mycobacterium leprae] Length = 281 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTGWKSRWYAD-KQYAEYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTCKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225 A IDYG A+T +G G+KV++ D V PA R + Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDIVGGKREVTAVAPAGAERARRE 228 >gi|221230473|ref|YP_002503889.1| 30S ribosomal protein S3 [Mycobacterium leprae Br4923] gi|254764537|sp|B8ZSB3|RS3_MYCLB RecName: Full=30S ribosomal protein S3 gi|219933580|emb|CAR71953.1| 30S ribosomal protein S3 [Mycobacterium leprae Br4923] Length = 281 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTGWKSRWYAD-KQYAEYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTCKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225 A IDYG A+T +G G+KV++ D V PA R + Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDIVGGKREVTAVAPAGAERARRE 228 >gi|77359122|ref|YP_338697.1| 30S ribosomal protein S3 [Pseudoalteromonas haloplanktis TAC125] gi|91207832|sp|Q3IF19|RS3_PSEHT RecName: Full=30S ribosomal protein S3 gi|76874033|emb|CAI85254.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas haloplanktis TAC125] Length = 233 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 106/210 (50%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSAQLFGDHKVRTFLTKELKTASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210 >gi|295106945|emb|CBL04488.1| SSU ribosomal protein S3P [Gordonibacter pamelaeae 7-10-1-b] Length = 237 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 108/219 (49%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W SRW++ +Y L DL IR++L +L +A V+K+ IER Sbjct: 1 MGQKVSPTGFRLGITEDWRSRWYSD-KDYAKNLENDLAIRKFLDKYLARAAVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IV +ARPG++IGKKG +I+ +RKKL + + + + V EV +PE++A LIAQS+ Sbjct: 60 GDKIKVIVTTARPGVVIGKKGAEIDSLRKKLEKVASGPVSIEVVEVKRPELDAALIAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAKGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A T GS G++V+V + + + PA E Sbjct: 180 KIDYGFCTAATTMGSIGVQVWVYHGEMLPGQKAPNPALE 218 >gi|294496991|ref|YP_003560691.1| 30S ribosomal protein S3 [Bacillus megaterium QM B1551] gi|295702356|ref|YP_003595431.1| 30S ribosomal protein S3 [Bacillus megaterium DSM 319] gi|294346928|gb|ADE67257.1| 30S ribosomal protein S3 [Bacillus megaterium QM B1551] gi|294800015|gb|ADF37081.1| 30S ribosomal protein S3 [Bacillus megaterium DSM 319] Length = 218 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W SRWFA G +Y LLHEDLK+REY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRVGVIRDWESRWFA-GKDYADLLHEDLKVREYIAKRLNDAAVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRLNVTIHTAKPGMVIGKGGTEVESLRKALNQLTGKRVHINILEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRSMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A A+T YG G+KV++ + + T + Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|90409296|ref|ZP_01217393.1| 30S ribosomal protein S3 [Psychromonas sp. CNPT3] gi|90309590|gb|EAS37778.1| 30S ribosomal protein S3 [Psychromonas sp. CNPT3] Length = 229 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 106/226 (46%), Positives = 149/226 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ ++S W+A E+ L D IR++L LK A ++K+ IER Sbjct: 1 MGQKVHPNGIRLGITKAFSSTWYAGKKEFADNLFSDHLIRKFLTEKLKNASLSKVTIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ M ++++EV KPE++A L+A SI Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRTAIAKMAGVPAQINISEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + + K Sbjct: 181 DIDYSTSEALTVYGIIGVKVWIFKGEVLGGLPLQQEQQPSKPKRKG 226 >gi|56707484|ref|YP_169380.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669955|ref|YP_666512.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis FSC198] gi|61215376|sp|Q5NHW2|RS3_FRATT RecName: Full=30S ribosomal protein S3 gi|123063579|sp|Q14JB4|RS3_FRAT1 RecName: Full=30S ribosomal protein S3 gi|56603976|emb|CAG44964.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320288|emb|CAL08347.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis FSC198] gi|282158628|gb|ADA78019.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis NE061598] Length = 222 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 105/222 (47%), Positives = 153/222 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++AR G++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+ Sbjct: 61 AQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 +DY TA A T YG G+KV++ + + + + R Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQIAEKKNNKKRS 222 >gi|119718119|ref|YP_925084.1| 30S ribosomal protein S3 [Nocardioides sp. JS614] gi|152060887|sp|A1SNL2|RS3_NOCSJ RecName: Full=30S ribosomal protein S3 gi|119538780|gb|ABL83397.1| SSU ribosomal protein S3P [Nocardioides sp. JS614] Length = 278 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG++ SRW+A Y + + ED+ IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKINPNGFRLGISTDHKSRWYAD-KLYKSYVGEDVAIRKLLSKGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q++MR GA G+++ SGRLNGAE+SRTE Y EGRVPL TLRA Sbjct: 120 AEQLSGRVQFRRAMRKAMQTSMRSGAKGIRIQCSGRLNGAEMSRTEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ + Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGEV 206 >gi|152980649|ref|YP_001355095.1| small subunit ribosomal protein S3 [Janthinobacterium sp. Marseille] gi|189045013|sp|A6T3J8|RS3_JANMA RecName: Full=30S ribosomal protein S3 gi|151280726|gb|ABR89136.1| small subunit ribosomal protein S3 [Janthinobacterium sp. Marseille] Length = 283 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 118/215 (54%), Positives = 160/215 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A S + +L+EDLK+R YL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYAGNSNFATMLNEDLKVRAYLKTKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ L+ M +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALTKMMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG AET YG GIKV+V D +++ ++ + Sbjct: 181 DIDYGFGEAETTYGIIGIKVWVYKGDRLANGEAPV 215 >gi|53720815|ref|YP_109801.1| 30S ribosomal protein S3 [Burkholderia pseudomallei K96243] gi|53723848|ref|YP_104160.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 23344] gi|76811070|ref|YP_335134.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710b] gi|121601078|ref|YP_994450.1| 30S ribosomal protein S3 [Burkholderia mallei SAVP1] gi|124383473|ref|YP_001027901.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10229] gi|126441331|ref|YP_001060744.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 668] gi|126450100|ref|YP_001082996.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10247] gi|126452567|ref|YP_001068028.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106a] gi|134283153|ref|ZP_01769854.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 305] gi|167001693|ref|ZP_02267485.1| 30S ribosomal protein S3 [Burkholderia mallei PRL-20] gi|167721571|ref|ZP_02404807.1| 30S ribosomal protein S3 [Burkholderia pseudomallei DM98] gi|167740545|ref|ZP_02413319.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 14] gi|167817750|ref|ZP_02449430.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 91] gi|167826147|ref|ZP_02457618.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 9] gi|167847659|ref|ZP_02473167.1| 30S ribosomal protein S3 [Burkholderia pseudomallei B7210] gi|167896231|ref|ZP_02483633.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 7894] gi|167904613|ref|ZP_02491818.1| 30S ribosomal protein S3 [Burkholderia pseudomallei NCTC 13177] gi|167912878|ref|ZP_02499969.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 112] gi|167920838|ref|ZP_02507929.1| 30S ribosomal protein S3 [Burkholderia pseudomallei BCC215] gi|217424767|ref|ZP_03456264.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 576] gi|226198160|ref|ZP_03793731.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pakistan 9] gi|237814139|ref|YP_002898590.1| ribosomal protein S3 [Burkholderia pseudomallei MSHR346] gi|242315858|ref|ZP_04814874.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106b] gi|254174687|ref|ZP_04881348.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 10399] gi|254180345|ref|ZP_04886943.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1655] gi|254190308|ref|ZP_04896816.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pasteur 52237] gi|254198497|ref|ZP_04904918.1| 30S ribosomal protein S3 [Burkholderia pseudomallei S13] gi|254201233|ref|ZP_04907597.1| 30S ribosomal protein S3 [Burkholderia mallei FMH] gi|254206574|ref|ZP_04912925.1| 30S ribosomal protein S3 [Burkholderia mallei JHU] gi|254259494|ref|ZP_04950548.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710a] gi|254300582|ref|ZP_04968027.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 406e] gi|254357112|ref|ZP_04973386.1| 30S ribosomal protein S3 [Burkholderia mallei 2002721280] gi|61215449|sp|Q62GL1|RS3_BURMA RecName: Full=30S ribosomal protein S3 gi|61215462|sp|Q63Q17|RS3_BURPS RecName: Full=30S ribosomal protein S3 gi|91207643|sp|Q3JMR9|RS3_BURP1 RecName: Full=30S ribosomal protein S3 gi|152060851|sp|A3P0A7|RS3_BURP0 RecName: Full=30S ribosomal protein S3 gi|189044957|sp|A3MRW0|RS3_BURM7 RecName: Full=30S ribosomal protein S3 gi|189044958|sp|A2S7I2|RS3_BURM9 RecName: Full=30S ribosomal protein S3 gi|189044959|sp|A1V897|RS3_BURMS RecName: Full=30S ribosomal protein S3 gi|189044960|sp|A3NEH3|RS3_BURP6 RecName: Full=30S ribosomal protein S3 gi|52211229|emb|CAH37218.1| 30S ribosomal protein S3 [Burkholderia pseudomallei K96243] gi|52427271|gb|AAU47864.1| ribosomal protein S3 [Burkholderia mallei ATCC 23344] gi|76580523|gb|ABA49998.1| ribosomal protein S3 [Burkholderia pseudomallei 1710b] gi|121229888|gb|ABM52406.1| 30S ribosomal protein S3 [Burkholderia mallei SAVP1] gi|124291493|gb|ABN00762.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10229] gi|126220824|gb|ABN84330.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 668] gi|126226209|gb|ABN89749.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106a] gi|126242970|gb|ABO06063.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10247] gi|134245348|gb|EBA45441.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 305] gi|147747127|gb|EDK54203.1| 30S ribosomal protein S3 [Burkholderia mallei FMH] gi|147752116|gb|EDK59182.1| 30S ribosomal protein S3 [Burkholderia mallei JHU] gi|148026176|gb|EDK84261.1| 30S ribosomal protein S3 [Burkholderia mallei 2002721280] gi|157810491|gb|EDO87661.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 406e] gi|157937984|gb|EDO93654.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pasteur 52237] gi|160695732|gb|EDP85702.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 10399] gi|169655237|gb|EDS87930.1| 30S ribosomal protein S3 [Burkholderia pseudomallei S13] gi|184210884|gb|EDU07927.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1655] gi|217392223|gb|EEC32248.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 576] gi|225929680|gb|EEH25696.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pakistan 9] gi|237503075|gb|ACQ95393.1| ribosomal protein S3 [Burkholderia pseudomallei MSHR346] gi|242139097|gb|EES25499.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106b] gi|243062590|gb|EES44776.1| 30S ribosomal protein S3 [Burkholderia mallei PRL-20] gi|254218183|gb|EET07567.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710a] Length = 266 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + E + +++ Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229 >gi|83719069|ref|YP_443566.1| 30S ribosomal protein S3 [Burkholderia thailandensis E264] gi|167620731|ref|ZP_02389362.1| 30S ribosomal protein S3 [Burkholderia thailandensis Bt4] gi|123726556|sp|Q2SU33|RS3_BURTA RecName: Full=30S ribosomal protein S3 gi|83652894|gb|ABC36957.1| ribosomal protein S3 [Burkholderia thailandensis E264] Length = 266 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D+ + E + +++ Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229 >gi|87122977|ref|ZP_01078838.1| 30S ribosomal protein S3 [Marinomonas sp. MED121] gi|86161745|gb|EAQ63049.1| 30S ribosomal protein S3 [Marinomonas sp. MED121] Length = 226 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 154/226 (68%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y LL DL++R+YL+ L QA V++I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRKYLEGKLVQASVSRIEIQRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ RI +++ARPG++IGKKG D+EK+R +S+M +H+++ E+ KPE++A L+AQ+I Sbjct: 61 AQSARITIHTARPGIVIGKKGEDVEKLRNAVSDMMGVPVHINIEEIRKPELDAKLVAQNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS--TIPAAEHRVVE 224 IDY T A T YG G+K ++ + + + A+ + + Sbjct: 181 DIDYATYEANTTYGIIGVKTWIFKGEILGGIEQVRANKGAQKKKSK 226 >gi|313884389|ref|ZP_07818150.1| ribosomal protein S3 [Eremococcus coleocola ACS-139-V-Col8] gi|312620173|gb|EFR31601.1| ribosomal protein S3 [Eremococcus coleocola ACS-139-V-Col8] Length = 219 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 145/219 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++WFA Y LHEDL+IR Y+ L A V++I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWFANNKNYADFLHEDLRIRNYVYGKLTDASVSQIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R LS +T ++H+++ E+ +P ++A L+A I Sbjct: 61 ANRVIVSIHTAKPGMVIGKGGAEVDTLRNDLSKLTGKKVHINIVEIKEPSLDAKLVALDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++RTE Y EG VPL TLR+ Sbjct: 121 AQQLENRVAFRRAQKQAIQRVMRAGAQGIKTQVSGRLNGADMARTEHYSEGTVPLHTLRS 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +++ + Sbjct: 181 DIDYAWEEADTTYGKIGVKVWICRGEILPGQENSGKGGK 219 >gi|297717886|gb|ADI50086.1| SSU ribosomal protein S3p [Candidatus Odyssella thessalonicensis L13] Length = 225 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 115/208 (55%), Positives = 162/208 (77%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W+SRWF+ +Y LH+DL+IR +++ +L QAGVAK++IER Sbjct: 1 MGQKVNPVGLRLGINKLWDSRWFS-KKDYAKNLHQDLEIRRFVEKNLAQAGVAKVVIERL 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGKKG DI+K+RKKLS++ N+++ +++ EV KPEI+A LIA++I Sbjct: 60 AKKARLTIHTARPGVLIGKKGADIDKLRKKLSDIANTDVTINLVEVRKPEIDAKLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ+ERRV FRRAMKRA+QS++R GA G++V SGRL GAE++R E Y EGRVPL TLR+ Sbjct: 120 AQQIERRVSFRRAMKRAMQSSLRLGAQGIRVNCSGRLGGAEIARMEWYREGRVPLHTLRS 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 +DY A+T YG GIKV+V + + Sbjct: 180 DVDYALGEAKTTYGIIGIKVWVYKGEIL 207 >gi|297537537|ref|YP_003673306.1| 30S ribosomal protein S3 [Methylotenera sp. 301] gi|297256884|gb|ADI28729.1| ribosomal protein S3 [Methylotenera sp. 301] Length = 241 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 124/211 (58%), Positives = 158/211 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRL V W+SRW+A + A+L D+K+RE+L L A V++ILIER Sbjct: 1 MGQKIHPIGFRLSVQKNWSSRWYANSKNFPAMLQGDIKVREFLNKKLASAAVSRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIAQSI Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRATLQGLMGVPVHLNIEEVRKPEIDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG GIKV+V + + + Sbjct: 181 DIDYGVAEASTTYGIIGIKVWVFKGEIFAGN 211 >gi|304438368|ref|ZP_07398309.1| 30S ribosomal protein S3 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368734|gb|EFM22418.1| 30S ribosomal protein S3 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 223 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 152/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+ Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L +T + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTEKRVDINIAEIKQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYGTA A T YG GIKV++ + + D + R Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKQAPKNNKERS 221 >gi|289579136|ref|YP_003477763.1| ribosomal protein S3 [Thermoanaerobacter italicus Ab9] gi|289528849|gb|ADD03201.1| ribosomal protein S3 [Thermoanaerobacter italicus Ab9] Length = 221 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 151/218 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A + LL ED+KIR Y++ L AG++KI+IER Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKNFSKLLIEDIKIRNYIKEKLYAAGISKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A+++ Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|133924|sp|P23309|RS3_BACST RecName: Full=30S ribosomal protein S3; AltName: Full=BS2; AltName: Full=BS3/BS4 gi|580921|emb|CAA38740.1| ribosomal protein S3 [Geobacillus stearothermophilus] Length = 218 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W SRW+A +Y L+HEDLKIREY+ L+ A V+++ IER Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLVHEDLKIREYINKRLQDAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L+ +T H+++ E+ KP+++A L+A++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALTQLTGKREHINIVEIKKPDLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR G GVK + RL GAE++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRPGRKGVKTMVVRRLGGAEIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + + Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218 >gi|315125268|ref|YP_004067271.1| 30S ribosomal protein S3 [Pseudoalteromonas sp. SM9913] gi|315013781|gb|ADT67119.1| 30S ribosomal protein S3 [Pseudoalteromonas sp. SM9913] Length = 233 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 105/210 (50%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYANSKDFSAQLFGDHKVRTFLTKELKAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210 >gi|255020771|ref|ZP_05292829.1| SSU ribosomal protein S3p (S3e) [Acidithiobacillus caldus ATCC 51756] gi|254969767|gb|EET27271.1| SSU ribosomal protein S3p (S3e) [Acidithiobacillus caldus ATCC 51756] Length = 220 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 109/221 (49%), Positives = 163/221 (73%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ WNSRW+++G ++ L ED+++RE+++ L A +++I+IER Sbjct: 1 MGQKTNPIGLRLGIIKNWNSRWYSKG-DFKDKLVEDIRVREFIRKRLGGAAISQIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ RI +++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+ Sbjct: 60 ARSARITLHTARPGVVIGKKGEDIEKLRLDVQRQMGVPVHINVEEIRKPELDAQLVAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLERRIMFRRAMKRAVTNAMRFGAKGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A+T YG G+KV++ + + S + +++ + Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWIFKGEILEWSTAQGGSSQQK 220 >gi|15607847|ref|NP_215221.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Rv] gi|15840114|ref|NP_335151.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis CDC1551] gi|31791892|ref|NP_854385.1| 30S ribosomal protein S3 [Mycobacterium bovis AF2122/97] gi|121636629|ref|YP_976852.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660482|ref|YP_001282005.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra] gi|148821912|ref|YP_001286666.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis F11] gi|215402491|ref|ZP_03414672.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987] gi|215425949|ref|ZP_03423868.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T92] gi|215429548|ref|ZP_03427467.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054] gi|218752357|ref|ZP_03531153.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis GM 1503] gi|219556556|ref|ZP_03535632.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T17] gi|224989101|ref|YP_002643788.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797650|ref|YP_003030651.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 1435] gi|254231027|ref|ZP_04924354.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis C] gi|254549668|ref|ZP_05140115.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185589|ref|ZP_05763063.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis CPHL_A] gi|260199717|ref|ZP_05767208.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T46] gi|260203878|ref|ZP_05771369.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis K85] gi|289442108|ref|ZP_06431852.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T46] gi|289446267|ref|ZP_06436011.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CPHL_A] gi|289552964|ref|ZP_06442174.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 605] gi|289568651|ref|ZP_06448878.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T17] gi|289573315|ref|ZP_06453542.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis K85] gi|289744431|ref|ZP_06503809.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987] gi|289749214|ref|ZP_06508592.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T92] gi|289752754|ref|ZP_06512132.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054] gi|289760834|ref|ZP_06520212.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis GM 1503] gi|294996202|ref|ZP_06801893.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 210] gi|297633206|ref|ZP_06950986.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN 4207] gi|297730186|ref|ZP_06959304.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN R506] gi|306774818|ref|ZP_07413155.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu001] gi|306781449|ref|ZP_07419786.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu002] gi|306783359|ref|ZP_07421681.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu003] gi|306787729|ref|ZP_07426051.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu004] gi|306794497|ref|ZP_07432799.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu005] gi|306796462|ref|ZP_07434764.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu006] gi|306806531|ref|ZP_07443199.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu007] gi|306970920|ref|ZP_07483581.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu010] gi|307078650|ref|ZP_07487820.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu011] gi|307083214|ref|ZP_07492327.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu012] gi|313657513|ref|ZP_07814393.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN V2475] gi|61236258|sp|P0A5X6|RS3_MYCTU RecName: Full=30S ribosomal protein S3 gi|61236268|sp|P0A5X7|RS3_MYCBO RecName: Full=30S ribosomal protein S3 gi|152060877|sp|A1KGI8|RS3_MYCBP RecName: Full=30S ribosomal protein S3 gi|189045021|sp|A5U093|RS3_MYCTA RecName: Full=30S ribosomal protein S3 gi|254764536|sp|C1AL41|RS3_MYCBT RecName: Full=30S ribosomal protein S3 gi|1806175|emb|CAB06470.1| PROBABLE 30S RIBOSOMAL PROTEIN S3 RPSC [Mycobacterium tuberculosis H37Rv] gi|13880264|gb|AAK44965.1| ribosomal protein S3 [Mycobacterium tuberculosis CDC1551] gi|31617479|emb|CAD93589.1| PROBABLE 30S RIBOSOMAL PROTEIN S3 RPSC [Mycobacterium bovis AF2122/97] gi|121492276|emb|CAL70743.1| Probable 30S ribosomal protein S3 rpsC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600086|gb|EAY59096.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis C] gi|148504634|gb|ABQ72443.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra] gi|148720439|gb|ABR05064.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis F11] gi|224772214|dbj|BAH25020.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319153|gb|ACT23756.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 1435] gi|289415027|gb|EFD12267.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T46] gi|289419225|gb|EFD16426.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CPHL_A] gi|289437596|gb|EFD20089.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 605] gi|289537746|gb|EFD42324.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis K85] gi|289542405|gb|EFD46053.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T17] gi|289684959|gb|EFD52447.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987] gi|289689801|gb|EFD57230.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T92] gi|289693341|gb|EFD60770.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054] gi|289708340|gb|EFD72356.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis GM 1503] gi|308216708|gb|EFO76107.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu001] gi|308325750|gb|EFP14601.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu002] gi|308331853|gb|EFP20704.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu003] gi|308335640|gb|EFP24491.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu004] gi|308337097|gb|EFP25948.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu005] gi|308343121|gb|EFP31972.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu006] gi|308347008|gb|EFP35859.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu007] gi|308359541|gb|EFP48392.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu010] gi|308363446|gb|EFP52297.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu011] gi|308367084|gb|EFP55935.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu012] gi|323720834|gb|EGB29901.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CDC1551A] gi|326905071|gb|EGE52004.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis W-148] gi|328457431|gb|AEB02854.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 4207] Length = 274 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|294341604|emb|CAZ90021.1| 30S ribosomal protein S3 [Thiomonas sp. 3As] Length = 274 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 121/226 (53%), Positives = 159/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRW+A ++Y +L ED+ +REYL LK A V+++LIER Sbjct: 1 MGQKIHPTGFRLAVTRGWASRWYAPSTQYAKMLSEDIMVREYLAKRLKNASVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++ +L+ + + + EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELAKRLGVPVAVDIEEVRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPLQTLRA Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARREWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +IDY T+ A+T YG G+KV+V D + AE E+D Sbjct: 181 NIDYATSEAKTTYGVIGVKVWVYKGDTPAKGAIVPAKAEPAAPEED 226 >gi|296137300|ref|YP_003644542.1| ribosomal protein S3 [Thiomonas intermedia K12] gi|295797422|gb|ADG32212.1| ribosomal protein S3 [Thiomonas intermedia K12] Length = 278 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 121/226 (53%), Positives = 159/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W SRW+A ++Y +L ED+ +REYL LK A V+++LIER Sbjct: 1 MGQKIHPTGFRLAVTRGWASRWYAPSTQYAKMLSEDIMVREYLAKRLKNASVSRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YSARPG++IGKKG DIE ++ +L+ + + + EV KPEI+A LIA SI Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELAKRLGVPVAVDIEEVRKPEIDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPLQTLRA Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARREWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +IDY T+ A+T YG G+KV+V D + AE E+D Sbjct: 181 NIDYATSEAKTTYGVIGVKVWVYKGDTPAKGAIVPAKAEPAAPEED 226 >gi|296141109|ref|YP_003648352.1| ribosomal protein S3 [Tsukamurella paurometabola DSM 20162] gi|296029243|gb|ADG80013.1| ribosomal protein S3 [Tsukamurella paurometabola DSM 20162] Length = 268 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG++KI IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKKLTDGLERAGISKIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E +A L+AQ I Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNSEADAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A+T +G G+KV++ D V + Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDVVGGRRELAAPS 218 >gi|91774641|ref|YP_544397.1| 30S ribosomal protein S3 [Methylobacillus flagellatus KT] gi|123078974|sp|Q1H4N1|RS3_METFK RecName: Full=30S ribosomal protein S3 gi|91708628|gb|ABE48556.1| SSU ribosomal protein S3P [Methylobacillus flagellatus KT] Length = 236 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 126/228 (55%), Positives = 164/228 (71%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + + A+L D+K+RE+L+ L A V+KI+IER Sbjct: 1 MGQKIHPFGFRLSVQKNWSSRWYANSNNFPAMLSSDIKVREFLKKKLAHAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIA+SI Sbjct: 61 AKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEVRKPEIDATLIAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKD 226 IDYG A A+T YG GIKV+V + + PA + V K Sbjct: 181 DIDYGVAEAKTTYGIIGIKVWVFKGEVFGNKIEQAAQPAEPEKKVRKS 228 >gi|258651369|ref|YP_003200525.1| 30S ribosomal protein S3 [Nakamurella multipartita DSM 44233] gi|258554594|gb|ACV77536.1| ribosomal protein S3 [Nakamurella multipartita DSM 44233] Length = 279 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 148/210 (70%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ WNSRW+A Y + ED++IR+ + +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWNSRWYAD-KSYADYVAEDVQIRKLMSKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVRNPESDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++++QSA R G+++ SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVSFRRAMRKSMQSAQRSPQVKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 A IDYG A+T +G G+KV++ D+V Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGDKVG 209 >gi|299065421|emb|CBJ36590.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum CMR15] Length = 265 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|127511098|ref|YP_001092295.1| 30S ribosomal protein S3 [Shewanella loihica PV-4] gi|152060904|sp|A3Q988|RS3_SHELP RecName: Full=30S ribosomal protein S3 gi|126636393|gb|ABO22036.1| SSU ribosomal protein S3P [Shewanella loihica PV-4] Length = 229 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 110/225 (48%), Positives = 157/225 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +++ +T +++ E+ KPE++A L+A+ I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNEVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA + T YG G+KV+V + + + + + K Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPALEEPKQQPKRK 225 >gi|319654874|ref|ZP_08008949.1| 30S ribosomal protein S3 [Bacillus sp. 2_A_57_CT2] gi|317393437|gb|EFV74200.1| 30S ribosomal protein S3 [Bacillus sp. 2_A_57_CT2] Length = 218 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 103/214 (48%), Positives = 151/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LLHEDLK+REY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRVGVIRDWESKWYA-GKDYADLLHEDLKVREYITKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK GT++E +RK L+++T +H+++ E+ + +I+A L+A++I Sbjct: 60 ANRLNITIHTAKPGMVIGKGGTEVEALRKSLNSLTGKRVHINILEIKRADIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQTIQRAMRAGAKGIKTMVSGRLGGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY TA A+T YG G+KV++ + + T Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKT 213 >gi|139438586|ref|ZP_01772102.1| Hypothetical protein COLAER_01100 [Collinsella aerofaciens ATCC 25986] gi|133776125|gb|EBA39945.1| Hypothetical protein COLAER_01100 [Collinsella aerofaciens ATCC 25986] Length = 236 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRWFA +Y L DL+IR+YL+ L +A V+++ IER Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDLEIRKYLEKRLSRAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 ++I+ +ARPG++IGKKG +I+ +R +L + + ++ + V E+ +PE++A L+A Sbjct: 60 GDKVKVIILTARPGVVIGKKGAEIDTLRTELEKVAGVSKGQLSVDVVEIKRPELDANLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA IDYGTAVA T G+CG+KV++ L +++ PA E Sbjct: 180 LRAKIDYGTAVASTTMGACGVKVWIYLGEKLPGQPVPNPALE 221 >gi|148652244|ref|YP_001279337.1| 30S ribosomal protein S3 [Psychrobacter sp. PRwf-1] gi|189045300|sp|A5WCJ6|RS3_PSYWF RecName: Full=30S ribosomal protein S3 gi|148571328|gb|ABQ93387.1| SSU ribosomal protein S3P [Psychrobacter sp. PRwf-1] Length = 247 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 110/222 (49%), Positives = 153/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L DL++R+YL+ L A ++ I+IER Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYADPKQYSEYLLNDLQVRDYLRKKLDNAMISHIMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I + +ARPG++IGKKG DIEK++K+L+ M +++ E+ P+++A L+A+ I Sbjct: 61 TGAAKITISTARPGIVIGKKGEDIEKLQKELTKMMGVPAQVNIEEITSPDLDARLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAQGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST-IPAAEHR 221 IDY + AET YG+ G+KV+V + + DS P E + Sbjct: 181 DIDYASVRAETTYGTIGVKVWVFRGEILDGMDSVYNPPKEDK 222 >gi|54778756|gb|AAV39590.1| ribosomal protein S3 [synthetic construct] Length = 260 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 4/229 (1%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 26 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 85 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 86 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 145 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 146 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 205 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 206 IDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 254 >gi|120402322|ref|YP_952151.1| 30S ribosomal protein S3 [Mycobacterium vanbaalenii PYR-1] gi|152060884|sp|A1T4P5|RS3_MYCVP RecName: Full=30S ribosomal protein S3 gi|119955140|gb|ABM12145.1| SSU ribosomal protein S3P [Mycobacterium vanbaalenii PYR-1] Length = 280 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTEWKSRWYAD-KQYADYIKEDVAIRKLLATGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESVAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELT 215 >gi|291482494|dbj|BAI83569.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. natto BEST195] Length = 218 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 99/209 (47%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDY T+ A+T YG G+KV++ + + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLP 208 >gi|148982468|ref|ZP_01816770.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3] gi|145960459|gb|EDK25836.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3] Length = 232 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223 >gi|187930358|ref|YP_001900845.1| 30S ribosomal protein S3 [Ralstonia pickettii 12J] gi|226697747|sp|B2UEL3|RS3_RALPJ RecName: Full=30S ribosomal protein S3 gi|187727248|gb|ACD28413.1| ribosomal protein S3 [Ralstonia pickettii 12J] Length = 262 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|119478126|ref|ZP_01618205.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2143] gi|119448832|gb|EAW30075.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2143] Length = 227 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 108/222 (48%), Positives = 153/222 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ S W+A G Y L DL++RE+L+ L A V++I+IER Sbjct: 1 MGQKVHPIGIRLGITKQHTSIWYAEGGAYAEHLINDLEVREFLEKKLNSASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG+IIGKKG D++K+RK+LS +H+++ E+ KP+++A L+AQ++ Sbjct: 61 AQTARITIHTARPGIIIGKKGEDVDKLRKELSAKMGVPVHINIEEIRKPDLDAKLVAQNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR VQ+AMR GA G+KV SGR+ GAE++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRVVQNAMRQGAQGIKVQVSGRVGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T YG G+KV++ + + + A+ + Sbjct: 181 DIDYSAYEAATTYGIIGVKVWIFKGEVIGGVEEVEVQAKGKK 222 >gi|261409515|ref|YP_003245756.1| 30S ribosomal protein S3 [Paenibacillus sp. Y412MC10] gi|315649693|ref|ZP_07902777.1| ribosomal protein S3 [Paenibacillus vortex V453] gi|329922023|ref|ZP_08277816.1| ribosomal protein S3 [Paenibacillus sp. HGF5] gi|261285978|gb|ACX67949.1| ribosomal protein S3 [Paenibacillus sp. Y412MC10] gi|315274881|gb|EFU38257.1| ribosomal protein S3 [Paenibacillus vortex V453] gi|328942406|gb|EGG38670.1| ribosomal protein S3 [Paenibacillus sp. HGF5] Length = 221 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 154/219 (70%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIREYL+ LK + V++I IER Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREYLKNKLKDSAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEVLRGQVTKIAGGKKVHINISEIKNPELDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTSVSGRLGGAEIARTEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYGTA A T YG G+KV++ + + + Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPTAKKQAAQE 218 >gi|170729003|ref|YP_001763029.1| 30S ribosomal protein S3 [Shewanella woodyi ATCC 51908] gi|169814350|gb|ACA88934.1| ribosomal protein S3 [Shewanella woodyi ATCC 51908] Length = 229 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 156/226 (69%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L D ++R++L+ +LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLTSDWEVRKFLEKNLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A+ I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222 IDY TA + T YG G+KV+V + + + + + Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVLPAHEEPKQQPKRKP 226 >gi|254468886|ref|ZP_05082292.1| ribosomal protein S3 [beta proteobacterium KB13] gi|207087696|gb|EDZ64979.1| ribosomal protein S3 [beta proteobacterium KB13] Length = 282 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 122/226 (53%), Positives = 159/226 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLGV W+S+WF + L+ D+K+RE+L L A V+KI+IER Sbjct: 1 MGQKINPIGFRLGVQKNWSSKWFTSTKNFPVFLNNDIKVREFLNKKLANAAVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN ++ + +ARPG++IGKKG DIE +R L + + L++ EV KPEI+ATLIAQSI Sbjct: 61 AKNAKVTIMTARPGIVIGKKGEDIENLRSDLQGLMGIPVQLNIEEVRKPEIDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A+T YG GIKV++ + D P + V +K Sbjct: 181 DIDYGVARAQTQYGIIGIKVWIYKGEVFQDDKVASPITKDVVGDKS 226 >gi|297582456|ref|YP_003698236.1| 30S ribosomal protein S3 [Bacillus selenitireducens MLS10] gi|297140913|gb|ADH97670.1| ribosomal protein S3 [Bacillus selenitireducens MLS10] Length = 219 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 152/211 (72%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+GV W S+W+A G +Y LLHED++IRE+L+ L +A V+ I IER Sbjct: 1 MGQKINPNGLRVGVIKGWESKWYA-GKDYADLLHEDIRIREFLENRLTEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L++MT +H+++NE+ +P++++ L+A++I Sbjct: 60 ANRVNVTIFTAKPGMVIGKGGSEVEALRKALNDMTGKRVHININEIKRPDLDSKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK+ +Q MR GA G++ SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAMKQTIQRTMRSGAKGIRTQVSGRLGGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYGTA A+T YG GIKV++ + + Sbjct: 180 DIDYGTAEADTTYGKLGIKVWIYKGEVLPTK 210 >gi|253577185|ref|ZP_04854505.1| 30S ribosomal protein S3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843429|gb|EES71457.1| 30S ribosomal protein S3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 222 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 156/220 (70%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIRE+L+ LK + V++I IER Sbjct: 1 MGQKVNPVGLRVGIIRDWESKWYA-GKDFGDLLLEDVKIREHLKNKLKDSAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +++A+PG++IGK G+++E +R +++ + ++H++++E+ P+++A L+A+S Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRGEITKIAGGKKVHINISEIKHPDLDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTAVSGRLGGAEIARTEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYGTA A T YG G+KV++ + + + A E Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPTAKKQQAAQE 219 >gi|326388203|ref|ZP_08209806.1| 30S ribosomal protein S3 [Novosphingobium nitrogenifigens DSM 19370] gi|326207369|gb|EGD58183.1| 30S ribosomal protein S3 [Novosphingobium nitrogenifigens DSM 19370] Length = 231 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 124/218 (56%), Positives = 156/218 (71%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRWFA G Y LL EDL IR+Y+ L QA ++K++IER Sbjct: 1 MGHKTNPIGLRLQINRTWDSRWFAEGRSYAQLLKEDLTIRKYIVEKLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CR+ +Y+ARPG+IIGKKG DIEK+R KLS +T S++ L++ E+ KPEI+A L+AQ I Sbjct: 61 AKVCRVSIYAARPGVIIGKKGADIEKLRAKLSTLTASDVKLNIVEIRKPEIDAKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDY A A TAYG GIK ++ + E+ D Sbjct: 181 NIDYAEAEAHTAYGVIGIKTWIF-KGEILGHDPLAQDR 217 >gi|292669853|ref|ZP_06603279.1| 30S ribosomal protein S3 [Selenomonas noxia ATCC 43541] gi|292648650|gb|EFF66622.1| 30S ribosomal protein S3 [Selenomonas noxia ATCC 43541] Length = 223 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 101/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+ Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L N+T+ + +++ E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNLTDKRVDINIAEIKQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYGTA A T YG GIKV++ + + D + R Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLHDKKQQSRNGKERS 221 >gi|309782840|ref|ZP_07677560.1| ribosomal protein S3 [Ralstonia sp. 5_7_47FAA] gi|308918264|gb|EFP63941.1| ribosomal protein S3 [Ralstonia sp. 5_7_47FAA] Length = 262 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|207721892|ref|YP_002252330.1| 30s ribosomal protein s3 [Ralstonia solanacearum MolK2] gi|300702786|ref|YP_003744387.1| 30S ribosomal protein S3 [Ralstonia solanacearum CFBP2957] gi|206587060|emb|CAQ17644.1| 30s ribosomal protein s3 [Ralstonia solanacearum MolK2] gi|299070448|emb|CBJ41743.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum CFBP2957] Length = 264 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|241664526|ref|YP_002982886.1| 30S ribosomal protein S3 [Ralstonia pickettii 12D] gi|240866553|gb|ACS64214.1| ribosomal protein S3 [Ralstonia pickettii 12D] Length = 264 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|17547732|ref|NP_521134.1| 30S ribosomal protein S3 [Ralstonia solanacearum GMI1000] gi|27734516|sp|Q8XV18|RS3_RALSO RecName: Full=30S ribosomal protein S3 gi|17430037|emb|CAD16722.1| probable 30s ribosomal protein s3 [Ralstonia solanacearum GMI1000] Length = 264 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|160932195|ref|ZP_02079586.1| hypothetical protein CLOLEP_01030 [Clostridium leptum DSM 753] gi|156868797|gb|EDO62169.1| hypothetical protein CLOLEP_01030 [Clostridium leptum DSM 753] Length = 223 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA+ ++G L ED +R++L+ L AGV KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDKDFGDTLVEDYNLRKHLKKKLYGAGVPKIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI ++ A+PG++IGK G +IEK+R + + N + +++ EV P++NA L+A++I Sbjct: 61 ASKVRIHIHCAKPGMVIGKGGAEIEKLRLECEKILNKPVAINIVEVKSPDLNAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMK+A+ AMRFGA G+K GRL GAE++RTE Y EG +PLQT+RA Sbjct: 121 AQQLEKRISFRRAMKQAIGRAMRFGAKGIKTQVGGRLGGAEIARTEQYHEGTIPLQTIRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A T YG G+KV++ + + ++ P A K Sbjct: 181 DIDYGFAEAATTYGRIGVKVWLYRGEVL--QNAGRPRARREGGNK 223 >gi|111220552|ref|YP_711346.1| 30S ribosomal protein S3 [Frankia alni ACN14a] gi|122954579|sp|Q0RRR5|RS3_FRAAA RecName: Full=30S ribosomal protein S3 gi|111148084|emb|CAJ59752.1| 30S ribosomal protein S3 [Frankia alni ACN14a] Length = 350 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A T +G G+KV++ D V Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >gi|325123598|gb|ADY83121.1| 30S ribosomal protein S3 [Acinetobacter calcoaceticus PHEA-2] Length = 265 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 159/228 (69%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226 IDY T AET YG+ G+KV++ + + PA AE R ++ Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAKRG 228 >gi|59710849|ref|YP_203625.1| 30S ribosomal protein S3 [Vibrio fischeri ES114] gi|197334087|ref|YP_002155002.1| ribosomal protein S3 [Vibrio fischeri MJ11] gi|75507109|sp|Q5E8A9|RS3_VIBF1 RecName: Full=30S ribosomal protein S3 gi|226697774|sp|B5FG15|RS3_VIBFM RecName: Full=30S ribosomal protein S3 gi|59478950|gb|AAW84737.1| 30S ribosomal subunit protein S3 [Vibrio fischeri ES114] gi|197315577|gb|ACH65024.1| ribosomal protein S3 [Vibrio fischeri MJ11] Length = 232 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 111/224 (49%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R+YL LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTKELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + EV A E + + Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIF-KGEVLGGMPAANAVEPKADK 223 >gi|159039828|ref|YP_001539081.1| ribosomal protein S3 [Salinispora arenicola CNS-205] gi|189045330|sp|A8M523|RS3_SALAI RecName: Full=30S ribosomal protein S3 gi|157918663|gb|ABW00091.1| ribosomal protein S3 [Salinispora arenicola CNS-205] Length = 288 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR KL +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGKLEKLTGKQVQLNIIEVKSPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A+I+YG A T +G G+KV++ D V ++ A E+ Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226 >gi|2113872|emb|CAA73678.1| rpsC [Mycobacterium bovis BCG] Length = 274 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE++R+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMNRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|332038831|gb|EGI75273.1| 30S ribosomal protein S3 [Pseudoalteromonas haloplanktis ANT/505] Length = 233 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 105/210 (50%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSAQLFGDHKVRTFLTKELKTASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210 >gi|256380592|ref|YP_003104252.1| ribosomal protein S3 [Actinosynnema mirum DSM 43827] gi|255924895|gb|ACU40406.1| ribosomal protein S3 [Actinosynnema mirum DSM 43827] Length = 275 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 102/231 (44%), Positives = 150/231 (64%), Gaps = 6/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLSRGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTKKQVQLNILEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G++V GRL GAE+SR+E Y +GRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSSQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 A IDYG A T +G G+KV++ D V + + R +D Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGDVVGGISAKRERDAAPSAERAPRRD 230 >gi|296168563|ref|ZP_06850367.1| 30S ribosomal protein S3 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896626|gb|EFG76265.1| 30S ribosomal protein S3 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 279 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|152973962|ref|YP_001373479.1| 30S ribosomal protein S3 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189044950|sp|A7GK26|RS3_BACCN RecName: Full=30S ribosomal protein S3 gi|152022714|gb|ABS20484.1| ribosomal protein S3 [Bacillus cytotoxicus NVH 391-98] Length = 219 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W SRWFA +Y LLHED+KIREY+ LK + V+K+ IER Sbjct: 1 MGQKVNPVGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYITARLKDSSVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK GT++E +RK L+ +T +H+++ EV K +++A L+A++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKKADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY TA A+T YG G+KV++ + + Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPSKKKASEEGGK 219 >gi|294142927|ref|YP_003558905.1| 30S ribosomal protein S3 [Shewanella violacea DSS12] gi|293329396|dbj|BAJ04127.1| ribosomal protein S3 [Shewanella violacea DSS12] Length = 229 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R++L+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKFLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVQVSGRLGGAEIARYEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE----VSDSDSTIPAAEHRV 222 IDY TA + T YG G+KV++ + V + + + Sbjct: 181 DIDYSTAESHTQYGVIGVKVWIFKGEVLDGIVPAHEEPKQQPKRKP 226 >gi|145225619|ref|YP_001136297.1| 30S ribosomal protein S3 [Mycobacterium gilvum PYR-GCK] gi|315445972|ref|YP_004078851.1| 30S ribosomal protein S3P [Mycobacterium sp. Spyr1] gi|189045020|sp|A4TEB8|RS3_MYCGI RecName: Full=30S ribosomal protein S3 gi|145218105|gb|ABP47509.1| SSU ribosomal protein S3P [Mycobacterium gilvum PYR-GCK] gi|315264275|gb|ADU01017.1| SSU ribosomal protein S3P [Mycobacterium sp. Spyr1] Length = 278 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 144/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYIKEDVAIRKLLATGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESRAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|289669350|ref|ZP_06490425.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 244 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 155/208 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P RLG++ WNS+W+A ++ A L DLK+RE L+ L QAGV+KILIER Sbjct: 1 MGHKVHPTGIRLGISKDWNSKWYANKGDFAAYLAADLKVREMLRKKLAQAGVSKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG GIKV + + Sbjct: 181 DIDYGFAEASTTYGIIGIKVLIYKGEVF 208 >gi|304438901|ref|ZP_07398824.1| 30S ribosomal protein S3 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372567|gb|EFM26150.1| 30S ribosomal protein S3 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 252 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 96/224 (42%), Positives = 148/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+S+W+A ++ LL ED KIREY++ L AG+AK+ IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYANKKDFSDLLIEDNKIREYIKTKLYAAGIAKVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + + +PG++IG+ G +E++R +L +T + ++V E+ +++A L+A+SI Sbjct: 61 ANRVKVSISTGKPGMVIGRGGVGVEELRAELEKLTGKSVVVNVEEIKNLDMDAVLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERR+ FRRAMK+A+Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 121 AEALERRISFRRAMKQAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A+T YG G+KV++ + + + + P + Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPQARNGQPRERDNRKK 224 >gi|220935486|ref|YP_002514385.1| ribosomal protein S3 [Thioalkalivibrio sp. HL-EbGR7] gi|219996796|gb|ACL73398.1| ribosomal protein S3 [Thioalkalivibrio sp. HL-EbGR7] Length = 228 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 114/226 (50%), Positives = 157/226 (69%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLGV+ WNS W+A G +Y +L +DL+IRE+L+ L QA V++I I R Sbjct: 1 MGQKVHPVGFRLGVSSEWNSTWYADGRDYANVLAKDLEIREFLKERLSQASVSRIEIARP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + I +++ARPG++IGKKG DIE +RK+ + + + +++ E+ KPE++A L+A Sbjct: 61 ARQAFITIHTARPGIVIGKKGEDIEALRKEAAAKLGLDVNSVKINIEEIRKPEVDAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLERR++FRRAMKRAV +AMR GA GVKV +GRLNGAE++R+E Y EGRVPL T Sbjct: 121 EGIAQQLERRIMFRRAMKRAVGNAMRLGALGVKVHVAGRLNGAEIARSEWYREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 LRA IDYG A A T YG G+KV+V + T E + Sbjct: 181 LRADIDYGFAEARTTYGVIGVKVWVFKGEVFDFEQKTDGGQEGKAA 226 >gi|296268556|ref|YP_003651188.1| 30S ribosomal protein S3 [Thermobispora bispora DSM 43833] gi|296091343|gb|ADG87295.1| ribosomal protein S3 [Thermobispora bispora DSM 43833] Length = 278 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 96/207 (46%), Positives = 145/207 (70%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ + SRW+A Y + ED+ IR LQ +++AG++++ IERT Sbjct: 1 MGQKVHPHGFRLGITTDFKSRWYAE-KLYKDYVAEDVAIRRMLQKGMERAGISRVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ + Sbjct: 60 TDRVQVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+AM+ GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKSGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDV 206 >gi|300690166|ref|YP_003751161.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum PSI07] gi|299077226|emb|CBJ49852.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum PSI07] Length = 264 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 115/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +++ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNEAPVVEEPQEERRK 225 >gi|326390655|ref|ZP_08212210.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus JW 200] gi|325993333|gb|EGD51770.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus JW 200] Length = 221 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 151/218 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKDFSKLLIEDIKIRNYIKEKLYSAGIPKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|254294434|ref|YP_003060457.1| ribosomal protein S3 [Hirschia baltica ATCC 49814] gi|254042965|gb|ACT59760.1| ribosomal protein S3 [Hirschia baltica ATCC 49814] Length = 253 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 127/239 (53%), Positives = 169/239 (70%), Gaps = 19/239 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--------------- 45 MGQK+NPI RLGVN T +SRW+A ++G LLHEDL++R+Y+Q Sbjct: 1 MGQKVNPIGLRLGVNRTADSRWYADSVDFGRLLHEDLRLRKYIQEWRPKDDNSGKRTGEV 60 Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105 ++AG++KI+IER HK CRI V+++RPG++IGKKG DIEK+RK LS E+ +++ E Sbjct: 61 LARRAGISKIIIERPHKKCRITVHTSRPGMVIGKKGADIEKLRKDLSKFVTDEVFVNLVE 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 V KPEI+A L+A+ +A+QLERRV FRRAMKR +QSAMR GA+G+++ +GRL GAE++RT Sbjct: 121 VRKPEIDAKLVAEDVARQLERRVSFRRAMKRTIQSAMRLGAEGIRLNVAGRLGGAEIART 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 E Y EGRVPL TLRA IDYG A A T YG GIKV++ + E+ + D P A R E Sbjct: 181 EWYREGRVPLHTLRADIDYGVAEAMTTYGIIGIKVWIF-KGEIMEHD---PMARDRKAE 235 >gi|153840303|ref|ZP_01992970.1| ribosomal protein S3 [Vibrio parahaemolyticus AQ3810] gi|149746038|gb|EDM57168.1| ribosomal protein S3 [Vibrio parahaemolyticus AQ3810] Length = 240 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 108/222 (48%), Positives = 152/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY T+ A T YG GIK ++ + E+ A E + Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVELKA 221 >gi|297545323|ref|YP_003677625.1| ribosomal protein S3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843098|gb|ADH61614.1| ribosomal protein S3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 221 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 150/218 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A + L ED+KIR Y++ L AG++KI+IER Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKNFSKFLIEDIKIRNYIKEKLYAAGISKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IGK G I+K+R++L MTN I L++ EV PE++A L+A+++ Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTIILNIVEVKTPELSAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|227499189|ref|ZP_03929324.1| 30S ribosomal protein S3P [Acidaminococcus sp. D21] gi|226904636|gb|EEH90554.1| 30S ribosomal protein S3P [Acidaminococcus sp. D21] Length = 227 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 159/227 (70%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+WFA +Y L ED+KIRE+++ QAG++++ IERT Sbjct: 1 MGQKVNPHGFRVGVIDDWDSKWFAD-KDYQKYLLEDIKIREFIKDKQFQAGISRVAIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +Y+A+PG++IG++G++IE ++K L+ +T+S++ +++ EV P+++ATL+A+++ Sbjct: 60 EQKMRISIYTAKPGIVIGRQGSNIELLKKDLAKLTDSKLDINIIEVKSPDMDATLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ V MR GA G+K+ SGRL GAE++RTE Y +G +PL TLRA Sbjct: 120 AGQLERRIAFRRAMKQCVGRTMRLGAKGIKITCSGRLGGAEIARTESYRDGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +IDYGTA A T YG GIKV++ + + + E + Sbjct: 180 NIDYGTAEAHTTYGRIGIKVWIYKGEVLPTVKAAAKKEAPEGQEGGA 226 >gi|312795780|ref|YP_004028702.1| SSU ribosomal protein S3P [Burkholderia rhizoxinica HKI 454] gi|312167555|emb|CBW74558.1| SSU ribosomal protein S3P [Burkholderia rhizoxinica HKI 454] Length = 267 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 118/227 (51%), Positives = 166/227 (73%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+ +REYL+ LK A V++++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTQFAGMLKEDIGVREYLKKKLKNASVSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ ++S+RPG++IGKKG DIE ++ +L +H+++ EV KPE +A LIA SI Sbjct: 61 AKNARLTIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEVRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A+T YG G+KV+V D + +D +P AE V +K + Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRND--MPVAEEPVEDKRA 225 >gi|71891981|ref|YP_277711.1| 30S ribosomal protein S3 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|91207640|sp|Q493K2|RS3_BLOPB RecName: Full=30S ribosomal protein S3 gi|71796087|gb|AAZ40838.1| 30S ribosomal subunit protein S3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 236 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 115/210 (54%), Positives = 151/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TW+S W+A ++ L D K+R +L L +A V++I+IER Sbjct: 1 MGQKVHPNGVRLGITKTWHSTWYANNKDFSDNLGNDFKVRHFLMQKLSKALVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ VY+ARPGLIIGKKG DIEK+RK ++ ++ L++ EV KPE++A L+A +I Sbjct: 61 AKSIRVTVYTARPGLIIGKKGEDIEKLRKNIARISGVPTQLNIAEVRKPELDAKLLADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRVVFRRAMKR VQ+AMR GA G+KV SGRL+GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVVFRRAMKRVVQNAMRLGAKGIKVEVSGRLSGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY + A T YG GIKV+V + + D Sbjct: 181 DIDYSLSEARTTYGIIGIKVWVFKGEILGD 210 >gi|94312242|ref|YP_585452.1| 30S ribosomal protein S3 [Cupriavidus metallidurans CH34] gi|123081148|sp|Q1LI43|RS3_RALME RecName: Full=30S ribosomal protein S3 gi|93356094|gb|ABF10183.1| 30S ribosomal subunit protein S3 [Cupriavidus metallidurans CH34] Length = 265 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 114/221 (51%), Positives = 160/221 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG + AET YG G+KV+V D + +D+ + Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQE 221 >gi|307543831|ref|YP_003896310.1| 30S ribosomal protein S3 [Halomonas elongata DSM 2581] gi|307215855|emb|CBV41125.1| 30S ribosomal protein S3 [Halomonas elongata DSM 2581] Length = 232 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 111/220 (50%), Positives = 153/220 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ S W+A Y L+ DL++R +L+ LK A V+ I+IER Sbjct: 1 MGQKVNPTGIRLGIVKDHTSVWYAERGAYADKLNNDLEVRSFLEERLKNASVSNIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N RI +++ARPG++IGKKG D++K+R+ LS M +H+++ EV KPE++A L+AQ+I Sbjct: 61 ANNARITIHTARPGIVIGKKGEDVDKLRRDLSQMMGVPVHVNIEEVRKPELDAKLVAQNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRSVQNAMRLGAGGIKVQLSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 ID+ T A+T YG G+KV++ + + + A+ Sbjct: 181 DIDFATYEAKTTYGIIGVKVWIFKGEILGGIEEVRAKAKQ 220 >gi|149192563|ref|ZP_01870730.1| 30S ribosomal protein S3 [Vibrio shilonii AK1] gi|148833604|gb|EDL50674.1| 30S ribosomal protein S3 [Vibrio shilonii AK1] Length = 232 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 109/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223 >gi|296333119|ref|ZP_06875573.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672821|ref|YP_003864492.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii str. W23] gi|296149735|gb|EFG90630.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411064|gb|ADM36182.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii str. W23] Length = 218 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVESLRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + T + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|56480312|ref|NP_709102.2| 30S ribosomal protein S3 [Shigella flexneri 2a str. 301] gi|27734495|sp|P59184|RS3_SHIFL RecName: Full=30S ribosomal protein S3 gi|56383863|gb|AAN44809.2| 30S ribosomal subunit protein S3 [Shigella flexneri 2a str. 301] Length = 233 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++ RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHRNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + PAA+ + ++ Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230 >gi|312127232|ref|YP_003992106.1| 30S ribosomal protein S3 [Caldicellulosiruptor hydrothermalis 108] gi|312793933|ref|YP_004026856.1| 30S ribosomal protein S3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877371|ref|ZP_07737336.1| ribosomal protein S3 [Caldicellulosiruptor lactoaceticus 6A] gi|311777251|gb|ADQ06737.1| ribosomal protein S3 [Caldicellulosiruptor hydrothermalis 108] gi|311795845|gb|EFR12209.1| ribosomal protein S3 [Caldicellulosiruptor lactoaceticus 6A] gi|312181073|gb|ADQ41243.1| ribosomal protein S3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 222 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFQKYVLEDYKIRRHIKEKLYHAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222 >gi|51244982|ref|YP_064866.1| 30S ribosomal protein S3 [Desulfotalea psychrophila LSv54] gi|61215519|sp|Q6AP65|RS3_DESPS RecName: Full=30S ribosomal protein S3 gi|50876019|emb|CAG35859.1| probable 30S ribosomal protein S3 [Desulfotalea psychrophila LSv54] Length = 217 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RL + TW+S W+A +Y L ED KIR++L+ L AG++ + IERT Sbjct: 1 MGQKVNPLGIRLNITRTWDSVWYAD-KDYSTFLIEDQKIRKFLKKRLSHAGLSSVKIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG +IE ++++L + + ++ L + EV +PE +A L+A +I Sbjct: 60 GEQVRIKLFTARPGIVIGKKGAEIEILKRELEKLVSRKVTLDIQEVRRPEADAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL RRV FRRAMK+AV SA+RFG G+K+ SGRL GAE+SR E EGRVPL TLRA Sbjct: 120 AQQLARRVAFRRAMKKAVSSALRFGVQGIKIACSGRLGGAEMSRCEWVREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +DY + + T YG G+KV++ + +SD D Sbjct: 180 DVDYALSESHTTYGIIGVKVWIFKGEVLSDKDK 212 >gi|146297279|ref|YP_001181050.1| ribosomal protein S3 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|189044962|sp|A4XLS4|RS3_CALS8 RecName: Full=30S ribosomal protein S3 gi|145410855|gb|ABP67859.1| SSU ribosomal protein S3P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 222 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W+SRWFA ++ L ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRLGIIKDWDSRWFANDKDFEKYLLEDYKIRRHIKEKLYNAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRIKVIIHTAKPGIVIGRAGSGVEALRKELEKITGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDVLPQKGAAAEKGGDK 222 >gi|323340380|ref|ZP_08080637.1| 30S ribosomal protein S3 [Lactobacillus ruminis ATCC 25644] gi|323092156|gb|EFZ34771.1| 30S ribosomal protein S3 [Lactobacillus ruminis ATCC 25644] Length = 218 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+G+ W+++W+A ++ + LHEDL IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPTGLRVGIIRDWDAKWYAE-KDFASNLHEDLHIRKYIEKKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++A+PG++IGK G+++EK+RK+L+N+T +H+++ E+ KP+++A L+ +SI Sbjct: 60 AKRVNVSIHTAKPGMVIGKGGSEVEKLRKELNNLTGKRVHINIVEIKKPDLDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK+A+Q MR GA G+KV +GRLNGA++SR E + EG VPL TLRA Sbjct: 120 AQQLENRVAFRRAMKQAIQRTMRAGAQGIKVQVAGRLNGADMSRVERFSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG G+KV++ + + + + Sbjct: 180 DIDYAWVEARTTYGQLGVKVWIYRGEVLPEKKDNSKGGK 218 >gi|218667516|ref|YP_002424836.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 23270] gi|218519729|gb|ACK80315.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 228 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 111/221 (50%), Positives = 156/221 (70%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ WNSRW+ S++ L ED+K+R++++ L V+ I+IER Sbjct: 9 MGQKTNPIGLRLGIIKNWNSRWY-GKSDFQEKLLEDIKVRQFIRERLAGGAVSDIIIERP 67 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ RI V++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+ Sbjct: 68 ARSARITVHTARPGIVIGKKGEDIEKLRHDVQKRMGVPVHINVEEIRKPELDAQLVAESV 127 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL RR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 128 AQQLVRRIMFRRAMKRAVTNAMRFGALGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 187 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A T YG G+KV++ + + S + AA + Sbjct: 188 DIDYGFAEANTTYGIIGVKVWIFKGEILEWSTAQTAAARQK 228 >gi|213158829|ref|YP_002320827.1| ribosomal protein S3 [Acinetobacter baumannii AB0057] gi|226697655|sp|B7IA33|RS3_ACIB5 RecName: Full=30S ribosomal protein S3 gi|213057989|gb|ACJ42891.1| ribosomal protein S3 [Acinetobacter baumannii AB0057] Length = 250 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L +LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKNLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226 >gi|83748155|ref|ZP_00945182.1| SSU ribosomal protein S3P [Ralstonia solanacearum UW551] gi|207723101|ref|YP_002253506.1| 30s ribosomal protein s3 [Ralstonia solanacearum IPO1609] gi|83725123|gb|EAP72274.1| SSU ribosomal protein S3P [Ralstonia solanacearum UW551] gi|206588294|emb|CAQ18992.1| 30s ribosomal protein s3 [Ralstonia solanacearum IPO1609] Length = 264 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 162/225 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKVELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + AET YG G+KV+V D + +D+ + K Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225 >gi|269217129|ref|ZP_06160983.1| ribosomal protein S3 [Slackia exigua ATCC 700122] gi|269129266|gb|EEZ60351.1| ribosomal protein S3 [Slackia exigua ATCC 700122] Length = 237 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 109/219 (49%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRW+A +Y L DL IR +L+ L +A V+KI IER Sbjct: 1 MGQKVMPTGFRLGITEDWRSRWYAD-KDYAKTLENDLAIRRFLEKKLARAAVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIV +ARPG++IGKKG +I+ +RK+++ + ++++ V EV +PE++ATL+A+SI Sbjct: 60 GDKTKIIVTTARPGVVIGKKGAEIDALRKEVAKVATGQVNIEVIEVKRPELDATLVARSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGALGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A T GS G+KV++ + + PA E Sbjct: 180 KIDYGFTTASTTMGSIGVKVWIYHGEMLPGGKVPQPALE 218 >gi|73542857|ref|YP_297377.1| 30S ribosomal protein S3 [Ralstonia eutropha JMP134] gi|91207835|sp|Q46WF0|RS3_RALEJ RecName: Full=30S ribosomal protein S3 gi|72120270|gb|AAZ62533.1| SSU ribosomal protein S3P [Ralstonia eutropha JMP134] Length = 264 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 113/220 (51%), Positives = 160/220 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++R++L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVRDFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG + AET YG G+KV+V D + +D+ + Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQ 220 >gi|307267008|ref|ZP_07548524.1| ribosomal protein S3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306917993|gb|EFN48251.1| ribosomal protein S3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 221 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 151/218 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYANDKDFSKLLIEDIKIRNYIKEKLYSAGIPKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|89100343|ref|ZP_01173208.1| 30S ribosomal protein S3 [Bacillus sp. NRRL B-14911] gi|89084964|gb|EAR64100.1| 30S ribosomal protein S3 [Bacillus sp. NRRL B-14911] Length = 218 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+WFA G +Y LLHEDLK+REY+ L A ++K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWFA-GKDYAELLHEDLKVREYITKRLSDASLSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ K +I+A L+A++I Sbjct: 60 ANRLNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKKADIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTMVSGRLGGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + T + Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|119947120|ref|YP_944800.1| ribosomal protein S3 [Psychromonas ingrahamii 37] gi|152060897|sp|A1T0D6|RS3_PSYIN RecName: Full=30S ribosomal protein S3 gi|119865724|gb|ABM05201.1| SSU ribosomal protein S3P [Psychromonas ingrahamii 37] Length = 230 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 153/228 (67%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ ++S W+A ++ A L D +IR++L LK A ++KI IER Sbjct: 1 MGQKVHPNGIRLGITKAFSSTWYAGKKDFAANLFSDFEIRKFLTEKLKNASLSKITIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ M ++++EV KPE++A L+A SI Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRTAIAKMAGVPAQINISEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVE 224 IDY T+ A T YG G+KV++ + + + P+ R Sbjct: 181 DIDYSTSEAHTVYGIIGVKVWIFKGEVLGGLPLQVEEQQPSKPKRKSR 228 >gi|198282643|ref|YP_002218964.1| 30S ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247164|gb|ACH82757.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 53993] Length = 220 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 111/221 (50%), Positives = 156/221 (70%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ WNSRW+ S++ L ED+K+R++++ L V+ I+IER Sbjct: 1 MGQKTNPIGLRLGIIKNWNSRWY-GKSDFQEKLLEDIKVRQFIRERLAGGAVSDIIIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ RI V++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+ Sbjct: 60 ARSARITVHTARPGIVIGKKGEDIEKLRHDVQKRMGVPVHINVEEIRKPELDAQLVAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL RR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLVRRIMFRRAMKRAVTNAMRFGALGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDYG A A T YG G+KV++ + + S + AA + Sbjct: 180 DIDYGFAEANTTYGIIGVKVWIFKGEILEWSTAQTAAARQK 220 >gi|222529724|ref|YP_002573606.1| 30S ribosomal protein S3 [Caldicellulosiruptor bescii DSM 6725] gi|254764510|sp|B9MKH5|RS3_ANATD RecName: Full=30S ribosomal protein S3 gi|222456571|gb|ACM60833.1| ribosomal protein S3 [Caldicellulosiruptor bescii DSM 6725] Length = 222 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFEKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222 >gi|153867894|ref|ZP_01998088.1| 30S ribosomal protein S3 [Beggiatoa sp. SS] gi|152144786|gb|EDN71912.1| 30S ribosomal protein S3 [Beggiatoa sp. SS] Length = 218 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 154/209 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W+S+W+A +Y L+ DLK+ E+++ L QA ++++ IER Sbjct: 7 MGQKVPPTGFRLGIIKDWSSKWYASSKDYANYLNTDLKVPEFIKKKLAQASLSEVRIERP 66 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RII+++ARPG++IGKKG DI+K+R +++ M +H+SV E+ KPE++A L+A S+ Sbjct: 67 ARNARIIIHTARPGIVIGKKGEDIDKLRTQVTEMMGIPVHISVEEIRKPEVDAHLVAVSV 126 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR V +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA Sbjct: 127 AQQLERRIMFRRAMKRVVGNAMRLGAQGIRINVSGRLNGAEIARKEWYREGRVPLHTLRA 186 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A T YG G+KV++ + + Sbjct: 187 DIDYGFAEAHTTYGVIGVKVWIFKGEIIG 215 >gi|95931437|ref|ZP_01314143.1| ribosomal protein S3 [Desulfuromonas acetoxidans DSM 684] gi|95132505|gb|EAT14198.1| ribosomal protein S3 [Desulfuromonas acetoxidans DSM 684] Length = 211 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 112/212 (52%), Positives = 157/212 (74%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLGV TW S+W+A +Y +HEDLK+R YL+ L AG++KI IER Sbjct: 1 MGQKVHPVGFRLGVIRTWESKWYAD-EDYARFVHEDLKLRNYLKKRLYHAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+ARPG+IIGK+G+++E ++++L+ +T+ EI L++ EV KPE+NA L+A+ + Sbjct: 60 AGKMKLNIYAARPGIIIGKRGSEVEALKQELAKLTDKEIFLNIQEVRKPEMNAQLVAEGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR+V ++RFGA G+K+ SGRL GAE+SRTE Y EGRVPL T+RA Sbjct: 120 ALQLERRVAFRRAMKRSVGQSLRFGAQGIKITCSGRLGGAEMSRTEWYREGRVPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV + + +S Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSREQ 211 >gi|312140912|ref|YP_004008248.1| 30S ribosomal protein s3 rpsc [Rhodococcus equi 103S] gi|325675450|ref|ZP_08155134.1| 30S ribosomal protein S3 [Rhodococcus equi ATCC 33707] gi|311890251|emb|CBH49569.1| 30S ribosomal protein S3 RpsC [Rhodococcus equi 103S] gi|325553421|gb|EGD23099.1| 30S ribosomal protein S3 [Rhodococcus equi ATCC 33707] Length = 265 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRAELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A+T +G G+KV++ D V AA Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELSAAAP 219 >gi|238021596|ref|ZP_04602022.1| hypothetical protein GCWU000324_01496 [Kingella oralis ATCC 51147] gi|237866210|gb|EEP67252.1| hypothetical protein GCWU000324_01496 [Kingella oralis ATCC 51147] Length = 232 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 160/226 (70%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRL VN W+S+WFA+ +++ +L +D+ +REYL L A V +I+IER Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTDFATVLKQDIDVREYLSKRLANASVGRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IG+KG DIE +++ L + +H+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGQKGADIEILKQDLEKLLGVAVHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY T+ A T YG G+KV+V + P E+R + Sbjct: 181 DVDYATSEALTTYGIIGLKVWVYKGE--MGQVQAQPERENRRSNRK 224 >gi|209693930|ref|YP_002261858.1| 30S ribosomal protein S3 [Aliivibrio salmonicida LFI1238] gi|226697660|sp|B6EPT1|RS3_ALISL RecName: Full=30S ribosomal protein S3 gi|208007881|emb|CAQ78011.1| 30S ribosomal subunit protein S3 [Aliivibrio salmonicida LFI1238] Length = 232 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R+YL LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTKELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIAEVRKPELDAHLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAQGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY TA A T YG G+KV++ + EV A E + + Sbjct: 181 DIDYATASAHTQYGVIGVKVWIF-KGEVLGGMPAANAVEPKADK 223 >gi|163752600|ref|ZP_02159779.1| ribosomal protein S3 [Shewanella benthica KT99] gi|161327512|gb|EDP98719.1| ribosomal protein S3 [Shewanella benthica KT99] Length = 229 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 153/226 (67%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYAKNLNSDWEVRKYLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL T RA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGAEIARYEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222 IDY TA + T YG G+KV+V + V + + + Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPAHEEPKQQPKRKP 226 >gi|302871504|ref|YP_003840140.1| ribosomal protein S3 [Caldicellulosiruptor obsidiansis OB47] gi|302574363|gb|ADL42154.1| ribosomal protein S3 [Caldicellulosiruptor obsidiansis OB47] Length = 222 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFDKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKVAASEKGGDK 222 >gi|78044912|ref|YP_361112.1| 30S ribosomal protein S3 [Carboxydothermus hydrogenoformans Z-2901] gi|91207645|sp|Q3A9S2|RS3_CARHZ RecName: Full=30S ribosomal protein S3 gi|77997027|gb|ABB15926.1| ribosomal protein S3 [Carboxydothermus hydrogenoformans Z-2901] Length = 222 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 156/219 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W+++WFA Y LLHEDLKIR+Y++ QAG+++I+IER Sbjct: 1 MGQKVHPKGLRIGIIKDWDAKWFADKKHYQELLHEDLKIRKYIKTKFYQAGISRIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++ARPG++IGK GT+IE +RK+L MT +I++++ E+ PEI+A L+A++I Sbjct: 61 SNRVKVTIHTARPGMVIGKGGTEIEVLRKELEKMTGKQININIAEIKVPEIDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ ++RAMK+AV A++ GA G+KV SGRL GAE++R+E Y EG+VPL TLRA Sbjct: 121 AAQIEKRISYKRAMKQAVSRALKMGAQGIKVACSGRLAGAEIARSEWYSEGKVPLTTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A T YG G+KV++ + + + + E Sbjct: 181 DIDYGFAEALTTYGKIGVKVWIYKGEVLPEVKKESVSTE 219 >gi|167036807|ref|YP_001664385.1| 30S ribosomal protein S3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039526|ref|YP_001662511.1| 30S ribosomal protein S3 [Thermoanaerobacter sp. X514] gi|256752638|ref|ZP_05493490.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus CCSD1] gi|300915223|ref|ZP_07132538.1| ribosomal protein S3 [Thermoanaerobacter sp. X561] gi|307725147|ref|YP_003904898.1| 30S ribosomal protein S3 [Thermoanaerobacter sp. X513] gi|320115229|ref|YP_004185388.1| 30S ribosomal protein S3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853766|gb|ABY92175.1| ribosomal protein S3 [Thermoanaerobacter sp. X514] gi|166855641|gb|ABY94049.1| ribosomal protein S3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748458|gb|EEU61510.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus CCSD1] gi|300888947|gb|EFK84094.1| ribosomal protein S3 [Thermoanaerobacter sp. X561] gi|307582208|gb|ADN55607.1| ribosomal protein S3 [Thermoanaerobacter sp. X513] gi|319928320|gb|ADV79005.1| ribosomal protein S3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 221 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 151/218 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER Sbjct: 1 MGQKVHPYGLRVGVTQDWLTKWYADDKDFSKLLIEDIKIRNYIKEKLYAAGIPKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|167626800|ref|YP_001677300.1| 30S ribosomal protein S3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667381|ref|ZP_04754959.1| 30S ribosomal protein S3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875930|ref|ZP_05248640.1| 30S ribosomal protein S3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596801|gb|ABZ86799.1| 30S ribosomal protein S3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841951|gb|EET20365.1| 30S ribosomal protein S3 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 222 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 154/219 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ NS W+A S+Y L+ED+K+RE+L L A V+KI IER Sbjct: 1 MGQKVNPNGIRLGIVKEHNSTWYADSSDYATKLNEDIKVREFLHKKLASAAVSKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A S+ Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGVPVQINIEEVRKPEIDAKLVADSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 +DY T+ A T YG G+KV++ + + + + Sbjct: 181 DVDYATSKALTTYGIIGVKVWIYKGEVLPGQMNQKNNKK 219 >gi|54307547|ref|YP_128567.1| 30S ribosomal protein S3 [Photobacterium profundum SS9] gi|61215569|sp|Q6LVB0|RS3_PHOPR RecName: Full=30S ribosomal protein S3 gi|46911967|emb|CAG18765.1| putative ribosomal protein S3 [Photobacterium profundum SS9] Length = 229 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 155/227 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R++L LK+A +++++IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLIKELKKASLSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRAHISKIAGVPAQINISEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG G+KV++ + + P A+ ++ S Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPIEEPKADKPKKQRKS 227 >gi|311070769|ref|YP_003975692.1| 30S ribosomal protein S3 [Bacillus atrophaeus 1942] gi|310871286|gb|ADP34761.1| 30S ribosomal protein S3 [Bacillus atrophaeus 1942] Length = 218 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + T + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|317131375|ref|YP_004090689.1| ribosomal protein S3 [Ethanoligenens harbinense YUAN-3] gi|315469354|gb|ADU25958.1| ribosomal protein S3 [Ethanoligenens harbinense YUAN-3] Length = 221 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 145/210 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA+ + +G LL ED +R YL+ L AG+ +I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDNVFGDLLVEDYNLRNYLKKKLFSAGIPRIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI ++ A+PG++IGK G +I+K+R +L + +++ EV P++NA L+A++I Sbjct: 61 ASRVRIHIHCAKPGMVIGKGGVEIDKLRTELEARLGKPVSINIVEVRSPDVNAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+++ AM+ GA G+KV +GRL GAE++R E Y EG +PLQTLRA Sbjct: 121 AAQLEKRISFRRAMKQSIGRAMKLGAKGIKVTVAGRLGGAEIARVEHYHEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG + A+T YG G+KV++ + + + Sbjct: 181 DIDYGFSEAKTTYGRIGVKVWIYKGEVLPE 210 >gi|304315946|ref|YP_003851091.1| ribosomal protein S3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777448|gb|ADL68007.1| ribosomal protein S3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 221 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 104/218 (47%), Positives = 156/218 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+GV+ W+++WFA+ ++ LL ED+KIR++++ + +GV KI IER Sbjct: 1 MGQKINPRGLRVGVSQDWDAKWFAKDKDFSDLLIEDIKIRDFIKNKIYASGVPKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I VY+A+PG++IGK G IE++R+++ MTN ++ +++ EV PE++A L+A++I Sbjct: 61 ANRIKIDVYTAKPGMVIGKGGAGIEELRQEIEKMTNKKVIINIVEVKNPELDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 ASQLERRISFRRAMKQSISRAMKQGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYG A A T YG G+KV+++ + + + A Sbjct: 181 NIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|307694146|ref|ZP_07636383.1| ribosomal protein S3 [Ruminococcaceae bacterium D16] Length = 287 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 108/216 (50%), Positives = 146/216 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A+ G LL ED KIR+YL+ L AG+ KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAKNELVGDLLVEDKKIRDYLKKTLYSAGIPKIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI ++ ARPG++IGK G +I+KI KL M + L + EV +++A L+A++I Sbjct: 61 NAKVRIYLHCARPGVVIGKGGEEIKKIEAKLVKMIGKPVDLKIVEVKNADMDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMK A+ AMR GA G+K SGRL GAE++RTE Y +G +PLQTLRA Sbjct: 121 AQQLEKRIGFRRAMKNAMGRAMRSGARGIKTCCSGRLGGAEIARTEHYHDGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A T YG G+KV++ + ++ + T P Sbjct: 181 DIDYGFAEAATTYGRIGVKVWIYKGEVLTQALRTTP 216 >gi|221307934|ref|ZP_03589781.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str. 168] gi|221312255|ref|ZP_03594060.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317189|ref|ZP_03598483.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321452|ref|ZP_03602746.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767030|ref|NP_388003.2| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str. 168] gi|321313793|ref|YP_004206080.1| 30S ribosomal protein S3 [Bacillus subtilis BSn5] gi|239938933|sp|P21465|RS3_BACSU RecName: Full=30S ribosomal protein S3; Short=BS3; AltName: Full=BS2 gi|1165309|gb|AAC45962.1| S3 [Bacillus subtilis] gi|225184657|emb|CAB11898.2| ribosomal protein S3 (BS3) [Bacillus subtilis subsp. subtilis str. 168] gi|320020067|gb|ADV95053.1| 30S ribosomal protein S3 [Bacillus subtilis BSn5] Length = 218 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218 >gi|56961938|ref|YP_173660.1| 30S ribosomal protein S3 [Bacillus clausii KSM-K16] gi|61215396|sp|Q5WLQ6|RS3_BACSK RecName: Full=30S ribosomal protein S3 gi|56908172|dbj|BAD62699.1| 30S ribosomal protein S3 [Bacillus clausii KSM-K16] Length = 220 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 150/211 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W+S+W+A +Y LLHED+ IRE+++ LK A V+K+ IER Sbjct: 1 MGQKVNPVGLRVGVIRDWDSKWYAGKKDYADLLHEDIAIREHVEGRLKDASVSKVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + +A+PG++IGK G+++E +RK L+ +T +H++++E+ + +++A L+A++I Sbjct: 61 ANRVNITISTAKPGMVIGKGGSEVEALRKSLNELTGKRVHINISEIKQADLDAKLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 121 ARQLENRISFRRAMKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYGTA A+T YG G+K++V + + Sbjct: 181 DIDYGTAEADTTYGKIGVKIWVYRGEVLPTK 211 >gi|41410265|ref|NP_963101.1| 30S ribosomal protein S3 [Mycobacterium avium subsp. paratuberculosis K-10] gi|61215641|sp|Q73SA8|RS3_MYCPA RecName: Full=30S ribosomal protein S3 gi|41399099|gb|AAS06717.1| RpsC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 280 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPYGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A I YG A+T +G G+KV++ D V Sbjct: 180 ADIGYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214 >gi|154684640|ref|YP_001419801.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens FZB42] gi|308172013|ref|YP_003918718.1| 30S ribosomal protein S3 (BS3) [Bacillus amyloliquefaciens DSM 7] gi|171854993|sp|A7Z0P4|RS3_BACA2 RecName: Full=30S ribosomal protein S3 gi|154350491|gb|ABS72570.1| RpsC [Bacillus amyloliquefaciens FZB42] gi|307604877|emb|CBI41248.1| ribosomal protein S3 (BS3) [Bacillus amyloliquefaciens DSM 7] gi|328551823|gb|AEB22315.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens TA208] gi|328910082|gb|AEB61678.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens LL3] Length = 218 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIRE++ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREFISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + T + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|315122812|ref|YP_004063301.1| 30S ribosomal protein S3 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496214|gb|ADR52813.1| 30S ribosomal protein S3 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 225 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 179/227 (78%), Positives = 201/227 (88%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPILFRLGVNCTW+SRWFARGSEYG LLHEDLKIR+YL+ +LKQAGVAKILIERT Sbjct: 1 MGQKINPILFRLGVNCTWSSRWFARGSEYGTLLHEDLKIRKYLEGNLKQAGVAKILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 HK C I VYSARPGLIIGKKG+DI++IRK LS MT SEIHL+VNEV KPEINATLIAQSI Sbjct: 61 HKKCFITVYSARPGLIIGKKGSDIDRIRKNLSKMTPSEIHLNVNEVSKPEINATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRVVFRRAMKRAVQSAMRFGA+G+K+I SGRLNG ELSRTECYLEGRVPLQTLRA Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGAEGIKIICSGRLNGLELSRTECYLEGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +IDYG+A+A+TAYG CG+KVYVS+R+ ++ R +EK + Sbjct: 181 NIDYGSAIAKTAYGICGVKVYVSIREV--SDSDNATSSNRRPLEKSN 225 >gi|284049251|ref|YP_003399590.1| ribosomal protein S3 [Acidaminococcus fermentans DSM 20731] gi|283953472|gb|ADB48275.1| ribosomal protein S3 [Acidaminococcus fermentans DSM 20731] Length = 225 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 159/219 (72%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+WFA +Y L ED+KIR++++ QAG++++ IERT Sbjct: 1 MGQKVNPHGFRVGVIADWDSKWFAD-KDYQKNLLEDIKIRDFIKDKQFQAGISRVTIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +Y+A+PG++IG++G++IE ++K L+ MT+S++ +++ EV +P+++ATL+A+++ Sbjct: 60 EQKMRISIYTAKPGIVIGRQGSNIELLKKDLAKMTDSKLDINIIEVKQPDMDATLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ V MR GA G+K+ +GRL GAE++RTE Y +G +PL TLRA Sbjct: 120 ASQLERRIAFRRAMKQCVGRTMRLGAKGIKIQCAGRLGGAEIARTESYRDGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 +IDYGTA A T YG GIKV++ + + A E Sbjct: 180 NIDYGTAEAHTTYGRIGIKVWIYKGEVLPTKAVKKEAPE 218 >gi|169794600|ref|YP_001712393.1| 30S ribosomal protein S3 [Acinetobacter baumannii AYE] gi|184159592|ref|YP_001847931.1| 30S ribosomal protein S3 [Acinetobacter baumannii ACICU] gi|215482189|ref|YP_002324371.1| ribosomal protein S3 [Acinetobacter baumannii AB307-0294] gi|239503228|ref|ZP_04662538.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB900] gi|260557033|ref|ZP_05829250.1| ribosomal protein S3 [Acinetobacter baumannii ATCC 19606] gi|294839741|ref|ZP_06784424.1| 30S ribosomal protein S3 [Acinetobacter sp. 6013113] gi|294842659|ref|ZP_06787342.1| 30S ribosomal protein S3 [Acinetobacter sp. 6014059] gi|294860419|ref|ZP_06798188.1| 30S ribosomal protein S3 [Acinetobacter sp. 6013150] gi|301345016|ref|ZP_07225757.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB056] gi|301512053|ref|ZP_07237290.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB058] gi|301595190|ref|ZP_07240198.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB059] gi|152060837|sp|A3M978|RS3_ACIBT RecName: Full=30S ribosomal protein S3 gi|226697654|sp|B7GW08|RS3_ACIB3 RecName: Full=30S ribosomal protein S3 gi|226697656|sp|B2HZA2|RS3_ACIBC RecName: Full=30S ribosomal protein S3 gi|226697658|sp|B0V6X4|RS3_ACIBY RecName: Full=30S ribosomal protein S3 gi|169147527|emb|CAM85388.1| 30S ribosomal protein S3 [Acinetobacter baumannii AYE] gi|183211186|gb|ACC58584.1| 30S ribosomal subunit protein S3 [Acinetobacter baumannii ACICU] gi|193078474|gb|ABO13472.2| 30S ribosomal protein S3 [Acinetobacter baumannii ATCC 17978] gi|213987863|gb|ACJ58162.1| ribosomal protein S3 [Acinetobacter baumannii AB307-0294] gi|260409639|gb|EEX02940.1| ribosomal protein S3 [Acinetobacter baumannii ATCC 19606] gi|322509502|gb|ADX04956.1| 30S ribosomal protein S3 [Acinetobacter baumannii 1656-2] gi|323519522|gb|ADX93903.1| 30S ribosomal protein S3 [Acinetobacter baumannii TCDC-AB0715] Length = 250 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226 >gi|84394584|ref|ZP_00993288.1| 30S ribosomal protein S3 [Vibrio splendidus 12B01] gi|86148903|ref|ZP_01067148.1| 30S ribosomal protein S3 [Vibrio sp. MED222] gi|218710743|ref|YP_002418364.1| 30S ribosomal protein S3 [Vibrio splendidus LGP32] gi|254764557|sp|B7VLF1|RS3_VIBSL RecName: Full=30S ribosomal protein S3 gi|84374804|gb|EAP91747.1| 30S ribosomal protein S3 [Vibrio splendidus 12B01] gi|85833311|gb|EAQ51524.1| 30S ribosomal protein S3 [Vibrio sp. MED222] gi|218323762|emb|CAV20118.1| Ribosomal protein S3 [Vibrio splendidus LGP32] Length = 232 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA +E+ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTNEFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223 >gi|120596995|ref|YP_961569.1| 30S ribosomal protein S3 [Shewanella sp. W3-18-1] gi|146294835|ref|YP_001185259.1| 30S ribosomal protein S3 [Shewanella putrefaciens CN-32] gi|152060906|sp|A1REC0|RS3_SHESW RecName: Full=30S ribosomal protein S3 gi|189045337|sp|A4YBX7|RS3_SHEPC RecName: Full=30S ribosomal protein S3 gi|120557088|gb|ABM23015.1| SSU ribosomal protein S3P [Shewanella sp. W3-18-1] gi|145566525|gb|ABP77460.1| SSU ribosomal protein S3P [Shewanella putrefaciens CN-32] gi|319424586|gb|ADV52660.1| ribosomal protein S3 [Shewanella putrefaciens 200] Length = 230 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 155/226 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R++L L+ A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKFLVEKLQAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARDEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ + T YG G+KV++ + + I + + ++ Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226 >gi|786159|dbj|BAA08837.1| ribosomal protein S3 [Bacillus subtilis] Length = 218 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARPEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218 >gi|254502211|ref|ZP_05114362.1| ribosomal protein S3 [Labrenzia alexandrii DFL-11] gi|222438282|gb|EEE44961.1| ribosomal protein S3 [Labrenzia alexandrii DFL-11] Length = 233 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 129/218 (59%), Positives = 165/218 (75%), Gaps = 1/218 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 RLG+N TW+SRW+A +EYG LLHED +IREYL LKQA V+K++IER HK CR+ ++ Sbjct: 1 MRLGINRTWDSRWYANKNEYGDLLHEDFRIREYLMKELKQAAVSKVVIERPHKKCRVSIH 60 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 S RPG++IGKKG DIE++RKK++ +TNSE+HL++ EV KPEI+ATL+A SIAQQLERRV Sbjct: 61 SGRPGVVIGKKGADIERLRKKIAEITNSEVHLNIVEVRKPEIDATLVAASIAQQLERRVA 120 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA IDYG A A Sbjct: 121 FRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRADIDYGVASA 180 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 TAYG CG+KV++ + E+ + D + + Sbjct: 181 HTAYGVCGVKVWIF-KGEILEHDPMASERRATAASEGN 217 >gi|152989978|ref|YP_001355700.1| 30S ribosomal protein S3 [Nitratiruptor sp. SB155-2] gi|189045023|sp|A6Q1I4|RS3_NITSB RecName: Full=30S ribosomal protein S3 gi|151421839|dbj|BAF69343.1| 30S ribosomal protein S3 [Nitratiruptor sp. SB155-2] Length = 229 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 107/218 (49%), Positives = 149/218 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF ++ + ED KIR++L+ L AG++ I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPDFNKMPERVEEDNKIRKFLKKELYYAGISNIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG DIEK+++KL + E+ +++ E +P+ +A L A+++ Sbjct: 61 AKKLRVTIVAARPGIIIGKKGADIEKLKQKLQKLVGKEVFINIKEEKRPQASAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q+A + G G+KV +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVIQAAQKAGVKGIKVQVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV++ + + P Sbjct: 181 KIDYGFAEAHTTYGVIGVKVWIFKGEVLQKGIRPEPTE 218 >gi|291542041|emb|CBL15151.1| SSU ribosomal protein S3P [Ruminococcus bromii L2-63] Length = 223 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 106/219 (48%), Positives = 152/219 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++GA L ED +R+ L+ L G++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANKKDFGATLVEDYNLRKTLKAQLYNFGISKIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K +I ++ A+PGL+IGK G++IEK+R + M + +++ EV PE++A L+A+SI Sbjct: 61 GKKVKISIHCAKPGLVIGKGGSEIEKLRAQCEKMLGKPVAINIVEVKAPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMK ++ +AMR GA G+K++ SGRL GAE++R+E Y EG +PLQTLRA Sbjct: 121 AQQLEKRISFRRAMKMSIGNAMRRGAKGIKIMCSGRLGGAEIARSEQYHEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A T YG G+KV++ + +++ S P E Sbjct: 181 DIDYGFAEANTTYGKVGVKVWLYKGEVLNEVKSRKPRRE 219 >gi|90414962|ref|ZP_01222924.1| 30S ribosomal protein S3 [Photobacterium profundum 3TCK] gi|90323901|gb|EAS40501.1| 30S ribosomal protein S3 [Photobacterium profundum 3TCK] Length = 229 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 155/227 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA E+ L D K+R++L LK+A +++++IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLIKELKKASLSRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRAHISKIAGVPAQINISEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG GIKV++ + + P A+ ++ S Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIFKGEVLGGMPIEEPKADKPKKQRKS 227 >gi|296282588|ref|ZP_06860586.1| 30S ribosomal protein S3 [Citromicrobium bathyomarinum JL354] Length = 231 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL +N TW+SRW+A G +Y LL ED++IR+++ L QA ++K++IER Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGRDYAKLLKEDIEIRKHIVNSLPQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI +Y+ARPG+IIGKKG DIEK+R LS MT SE+ L++ E+ KPEI+A L+AQ I Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRTTLSRMTESEVKLNIVEIRKPEIDAKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRAVQSA+R GA+G+++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIRITCGGRLGGAEIARVEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 ++DY A A TAYG GIK ++ + E+ D P A+ R++ + Sbjct: 181 NVDYAEAEALTAYGIIGIKCWIF-KGEILAHD---PTAQDRLMME 221 >gi|269798544|ref|YP_003312444.1| ribosomal protein S3 [Veillonella parvula DSM 2008] gi|282849870|ref|ZP_06259253.1| ribosomal protein S3 [Veillonella parvula ATCC 17745] gi|294792800|ref|ZP_06757947.1| ribosomal protein S3 [Veillonella sp. 6_1_27] gi|294794554|ref|ZP_06759690.1| ribosomal protein S3 [Veillonella sp. 3_1_44] gi|269095173|gb|ACZ25164.1| ribosomal protein S3 [Veillonella parvula DSM 2008] gi|282580307|gb|EFB85707.1| ribosomal protein S3 [Veillonella parvula ATCC 17745] gi|294454884|gb|EFG23257.1| ribosomal protein S3 [Veillonella sp. 3_1_44] gi|294456699|gb|EFG25062.1| ribosomal protein S3 [Veillonella sp. 6_1_27] Length = 222 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 156/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++ATL+A++I Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYGTA A T YG GIKV++ + + ++ E Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQAPAKKEE 219 >gi|24371835|ref|NP_715877.1| 30S ribosomal protein S3 [Shewanella oneidensis MR-1] gi|113968550|ref|YP_732343.1| 30S ribosomal protein S3 [Shewanella sp. MR-4] gi|114045713|ref|YP_736263.1| 30S ribosomal protein S3 [Shewanella sp. MR-7] gi|117918663|ref|YP_867855.1| 30S ribosomal protein S3 [Shewanella sp. ANA-3] gi|27734494|sp|P59183|RS3_SHEON RecName: Full=30S ribosomal protein S3 gi|123130850|sp|Q0HNT1|RS3_SHESM RecName: Full=30S ribosomal protein S3 gi|123326998|sp|Q0I099|RS3_SHESR RecName: Full=30S ribosomal protein S3 gi|152060905|sp|A0KRN0|RS3_SHESA RecName: Full=30S ribosomal protein S3 gi|24345648|gb|AAN53322.1|AE015473_9 ribosomal protein S3 [Shewanella oneidensis MR-1] gi|113883234|gb|ABI37286.1| SSU ribosomal protein S3P [Shewanella sp. MR-4] gi|113887155|gb|ABI41206.1| SSU ribosomal protein S3P [Shewanella sp. MR-7] gi|117610995|gb|ABK46449.1| SSU ribosomal protein S3P [Shewanella sp. ANA-3] Length = 230 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 156/226 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL L+ A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKYLADKLQAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ + T YG GIKV++ + + I + + ++ Sbjct: 181 DIDYSTSESHTQYGVIGIKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226 >gi|126176349|ref|YP_001052498.1| 30S ribosomal protein S3 [Shewanella baltica OS155] gi|152998755|ref|YP_001364436.1| 30S ribosomal protein S3 [Shewanella baltica OS185] gi|160873332|ref|YP_001552648.1| 30S ribosomal protein S3 [Shewanella baltica OS195] gi|217975195|ref|YP_002359946.1| 30S ribosomal protein S3 [Shewanella baltica OS223] gi|304412771|ref|ZP_07394373.1| ribosomal protein S3 [Shewanella baltica OS183] gi|307307435|ref|ZP_07587170.1| ribosomal protein S3 [Shewanella baltica BA175] gi|189045334|sp|A3DA66|RS3_SHEB5 RecName: Full=30S ribosomal protein S3 gi|189045335|sp|A6WHT4|RS3_SHEB8 RecName: Full=30S ribosomal protein S3 gi|189045336|sp|A9KWA8|RS3_SHEB9 RecName: Full=30S ribosomal protein S3 gi|254764545|sp|B8EBJ9|RS3_SHEB2 RecName: Full=30S ribosomal protein S3 gi|125999554|gb|ABN63629.1| SSU ribosomal protein S3P [Shewanella baltica OS155] gi|151363373|gb|ABS06373.1| ribosomal protein S3 [Shewanella baltica OS185] gi|160858854|gb|ABX47388.1| ribosomal protein S3 [Shewanella baltica OS195] gi|217500330|gb|ACK48523.1| ribosomal protein S3 [Shewanella baltica OS223] gi|304348851|gb|EFM13267.1| ribosomal protein S3 [Shewanella baltica OS183] gi|306910223|gb|EFN40656.1| ribosomal protein S3 [Shewanella baltica BA175] gi|315265559|gb|ADT92412.1| ribosomal protein S3 [Shewanella baltica OS678] Length = 230 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 156/226 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y + L+ D ++R++L L+ A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYASNLNSDWEVRKFLVEKLQAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARDEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ + T YG G+KV++ + + I + + ++ Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226 >gi|91791545|ref|YP_561196.1| 30S ribosomal protein S3 [Shewanella denitrificans OS217] gi|123166585|sp|Q12SV3|RS3_SHEDO RecName: Full=30S ribosomal protein S3 gi|91713547|gb|ABE53473.1| SSU ribosomal protein S3P [Shewanella denitrificans OS217] Length = 229 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 110/225 (48%), Positives = 157/225 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL LK A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRQYLTEKLKAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +++ +T + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAQVAKITGTTAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY T+ + T YG G+KV++ + + I + + K Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGLVPQIEEPKQQPKRK 225 >gi|268680581|ref|YP_003305012.1| ribosomal protein S3 [Sulfurospirillum deleyianum DSM 6946] gi|268618612|gb|ACZ12977.1| ribosomal protein S3 [Sulfurospirillum deleyianum DSM 6946] Length = 237 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 113/227 (49%), Positives = 156/227 (68%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W+SRWF + ED KIR +L+ L AGV++ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWDSRWFPGKQTLATSIGEDYKIRTFLKKELYYAGVSQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+DIEK+R KLS + N ++++++ E +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDIEKLRLKLSKLINKDVNVNIKEERRPQSSAQLCAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG A A T YG G+KV++ + + + + EK++ Sbjct: 181 KIDYGFAEAHTTYGVIGVKVWIFKGEVLV---KGLAPEKEEASEKEN 224 >gi|114561342|ref|YP_748855.1| 30S ribosomal protein S3 [Shewanella frigidimarina NCIMB 400] gi|122301110|sp|Q089P8|RS3_SHEFN RecName: Full=30S ribosomal protein S3 gi|114332635|gb|ABI70017.1| SSU ribosomal protein S3P [Shewanella frigidimarina NCIMB 400] Length = 229 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 113/225 (50%), Positives = 155/225 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL LK A V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRQYLTEKLKAASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+E +R +S +T + +++ E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEVLRAYVSKITGTTAQINIAEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY TA + T YG GIKV++ + + I + + K Sbjct: 181 DIDYSTAESHTQYGVIGIKVWIFKGEVLDGLVPAIEEPKQQPKRK 225 >gi|268609587|ref|ZP_06143314.1| SSU ribosomal protein S3P [Ruminococcus flavefaciens FD-1] Length = 261 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 148/225 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++G L ED +R +++ L AGV +I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYANKADFGDTLVEDYNVRNFIKKSLYAAGVPRIEIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI ++ A+PG++IG+ G +IEK+R +L M ++ +++ EV +P++++ L+A+ I Sbjct: 61 ADKVRIHIHCAKPGIVIGRGGAEIEKLRVQLEKMMKKQVFINIIEVKQPDMDSQLVAEKI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LE RV FRRAMK+++ MR GA G+KV SGRL GAE++R+E Y EG +PLQT+RA Sbjct: 121 ALDLENRVSFRRAMKQSIGRTMRLGAKGIKVKVSGRLAGAEIARSESYHEGTIPLQTIRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A+T YG G+KV++ + + + A +V K Sbjct: 181 DIDYGFAEADTTYGKLGVKVWIYKGEVLKGDAAKAAAQREKVERK 225 >gi|326332197|ref|ZP_08198477.1| ribosomal protein S3 [Nocardioidaceae bacterium Broad-1] gi|325949903|gb|EGD41963.1| ribosomal protein S3 [Nocardioidaceae bacterium Broad-1] Length = 275 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG++ SRW+A +Y + ED+KIR+ L +++AG+AK+ IERT Sbjct: 1 MGQKINPNGFRLGISTDHKSRWYAD-KQYKEYVGEDVKIRKLLSKGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRLRTELEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+ MR GA G+++ SGRLNGAE+SRTE Y EGRVPL TLRA Sbjct: 120 AEQLSGRVQFRRAMRKAMQTTMRSGAKGIRIQCSGRLNGAEMSRTEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ + Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGEV 206 >gi|254506464|ref|ZP_05118606.1| ribosomal protein S3 [Vibrio parahaemolyticus 16] gi|260779497|ref|ZP_05888387.1| SSU ribosomal protein S3p (S3e) [Vibrio coralliilyticus ATCC BAA-450] gi|323492125|ref|ZP_08097287.1| 30S ribosomal protein S3 [Vibrio brasiliensis LMG 20546] gi|219550638|gb|EED27621.1| ribosomal protein S3 [Vibrio parahaemolyticus 16] gi|260604306|gb|EEX30610.1| SSU ribosomal protein S3p (S3e) [Vibrio coralliilyticus ATCC BAA-450] gi|323313686|gb|EGA66788.1| 30S ribosomal protein S3 [Vibrio brasiliensis LMG 20546] Length = 232 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223 >gi|253995724|ref|YP_003047788.1| 30S ribosomal protein S3 [Methylotenera mobilis JLW8] gi|253982403|gb|ACT47261.1| ribosomal protein S3 [Methylotenera mobilis JLW8] Length = 240 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 123/211 (58%), Positives = 157/211 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRL V W SRW+A + A+L D+K+RE+L L A V++I+IER Sbjct: 1 MGQKINPIGFRLSVQKNWASRWYANSKNFPAMLQSDIKVREFLNKKLASAAVSRIMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPE++ATLIAQSI Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRSSLQGLMGVPVHLNIEEVRKPELDATLIAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG GIKV+V + + + Sbjct: 181 DIDYGVAEASTTYGIIGIKVWVFKGEIFAGN 211 >gi|313893202|ref|ZP_07826779.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412] gi|313442555|gb|EFR60970.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412] Length = 221 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++ATL+A++I Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A T YG GIKV++ + + ++ E Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218 >gi|160947694|ref|ZP_02094861.1| hypothetical protein PEPMIC_01629 [Parvimonas micra ATCC 33270] gi|158446828|gb|EDP23823.1| hypothetical protein PEPMIC_01629 [Parvimonas micra ATCC 33270] Length = 244 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 102/231 (44%), Positives = 157/231 (67%), Gaps = 4/231 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+SRWFA E+G LL ED IR+ ++ + +GV K+ IER+ Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWFADKKEFGNLLVEDHNIRKLVKKEVALSGVPKVEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V++A+PG++IGK G +E++R K+ +T ++ ++V EV +P+++A L+A++I Sbjct: 61 ANRVKVTVFTAKPGMVIGKSGAGVEELRVKIEKLTGKKVIVNVEEVKRPDLSAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+A+Q +++ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 121 AGQLERRVSFRRAMKQAMQRSLKAGAKGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD----STIPAAEHRVVEKDS 227 I+YG A A+T YG G+KV++ + + PA + R +KD+ Sbjct: 181 DIEYGFAEADTTYGKLGVKVWLYKGEVLPGMKAAVIEERPAKKDRRNKKDN 231 >gi|320352923|ref|YP_004194262.1| 30S ribosomal protein S3P [Desulfobulbus propionicus DSM 2032] gi|320121425|gb|ADW16971.1| SSU ribosomal protein S3P [Desulfobulbus propionicus DSM 2032] Length = 221 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+ + +W S W+A +Y LH+D IR+YL+ L AGV++I+IERT Sbjct: 1 MGQKVNPVGLRINITRSWESIWYAD-KDYANNLHQDQLIRKYLKQRLFHAGVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ +++ARPG++IGKKGT+IE ++K L + + EV +PE +A L+A++I Sbjct: 60 GEKVKVKLFTARPGIVIGKKGTEIEGLKKDLETKFKRNCFIDIQEVRRPEADAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+++ SA+RFG G+K+ SGRL GAE+SRTE + EGRVPL TLRA Sbjct: 120 ASQLEKRIAFRRAMKKSINSALRFGVQGIKISCSGRLGGAEMSRTEWFKEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYGTA A+T YG G+KV++ + ++D++ Sbjct: 180 DIDYGTAEAKTTYGIIGVKVWIFKGEILADTEQVSEQPSQ 219 >gi|288917236|ref|ZP_06411605.1| ribosomal protein S3 [Frankia sp. EUN1f] gi|288351427|gb|EFC85635.1| ribosomal protein S3 [Frankia sp. EUN1f] Length = 320 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 148/218 (67%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A T +G G+KV++ D V Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDVVQSRAEREAQE 217 >gi|297569416|ref|YP_003690760.1| ribosomal protein S3 [Desulfurivibrio alkaliphilus AHT2] gi|296925331|gb|ADH86141.1| ribosomal protein S3 [Desulfurivibrio alkaliphilus AHT2] Length = 221 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL + TW+S W+A +Y + ED +++YL+ L AGV+KI I RT Sbjct: 1 MGQKVNPIGLRLNIVRTWDSIWYAD-KDYSRNILEDQDLKKYLKKRLFHAGVSKIQILRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IGKKG++I+ ++ L T + + EV +PE +A L+A++I Sbjct: 60 GDKIRVKLHTARPGIVIGKKGSEIDALKADLEKRTGRVCAVDIQEVRRPEADAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMK++V A++FGA G+KV SGRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AQQLERRIAFRRAMKKSVNMALKFGAKGIKVACSGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A T YG G+KV++ + +++ D Sbjct: 180 DIDYGLAEARTTYGIIGVKVWIFKGEVLAEED 211 >gi|114567835|ref|YP_754989.1| 30S ribosomal protein S3 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317289|sp|Q0AUI6|RS3_SYNWW RecName: Full=30S ribosomal protein S3 gi|114338770|gb|ABI69618.1| SSU ribosomal protein S3P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 227 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 95/225 (42%), Positives = 158/225 (70%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FR+G+ W+S W+A +Y LLHED+K+R++++ AG++K+ I+RT Sbjct: 1 MGQKVHPKGFRIGIIRDWDSNWYAD-RDYSELLHEDVKLRKFIKDRFYAAGISKVEIQRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++A+PG+IIG+ G ++E+++ L+ MT +++++ E+ +PE++A ++A+++ Sbjct: 60 GNRIRVTIHTAKPGIIIGRGGIEVERLKVNLAEMTKKNVNINIQEIRRPEMDAQIVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMK+ V MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA Sbjct: 120 AQQLEKRISFRRAMKQTVGRTMRSGGIGIKIAISGRLGGAEIARTEWYAEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A T YG GIKV+++ + + ++ + + +E+ Sbjct: 180 DIDYGFAEANTTYGKIGIKVWINRGEILPEAKQRPKEPKQKEMEE 224 >gi|157377443|ref|YP_001476043.1| 30S ribosomal protein S3 [Shewanella sediminis HAW-EB3] gi|157319817|gb|ABV38915.1| ribosomal protein S3 [Shewanella sediminis HAW-EB3] Length = 229 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 153/226 (67%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLTSDSEVRKFLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222 IDY TA + T YG G+KV+V + V + + + Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPAHEEPKQQPKRKP 226 >gi|311029055|ref|ZP_07707145.1| 30S ribosomal protein S3 [Bacillus sp. m3-13] Length = 218 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W S+W+A G +Y LLHED+K+REY+ L A V+K+ IER Sbjct: 1 MGQKVNPIGLRVGVIRDWESKWYA-GKDYANLLHEDIKVREYIAKRLNDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRLNVTVHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+++Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQSLQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A+T YG G+KV++ + + + Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218 >gi|169632356|ref|YP_001706092.1| 30S ribosomal protein S3 [Acinetobacter baumannii SDF] gi|226697657|sp|B0VQS4|RS3_ACIBS RecName: Full=30S ribosomal protein S3 gi|169151148|emb|CAO99820.1| 30S ribosomal protein S3 [Acinetobacter baumannii] Length = 250 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPVGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226 >gi|255099238|ref|ZP_05328215.1| 30S ribosomal protein S3 [Clostridium difficile QCD-63q42] Length = 266 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWFA E+G LL ED IR++L+ L AGVAKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ++ A+PG++IG+ G IE ++ +L MT I +++ EV + NA L+A++ Sbjct: 61 SANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +ERRV FRRAMK+A+Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 A IDYG A A+T YG GIKV++ + + D P E R Sbjct: 181 ADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPREESRKS 224 >gi|126697646|ref|YP_001086543.1| 30S ribosomal protein S3 [Clostridium difficile 630] gi|254973737|ref|ZP_05270209.1| 30S ribosomal protein S3 [Clostridium difficile QCD-66c26] gi|255091127|ref|ZP_05320605.1| 30S ribosomal protein S3 [Clostridium difficile CIP 107932] gi|255305021|ref|ZP_05349193.1| 30S ribosomal protein S3 [Clostridium difficile ATCC 43255] gi|255312781|ref|ZP_05354364.1| 30S ribosomal protein S3 [Clostridium difficile QCD-76w55] gi|255515540|ref|ZP_05383216.1| 30S ribosomal protein S3 [Clostridium difficile QCD-97b34] gi|255648635|ref|ZP_05395537.1| 30S ribosomal protein S3 [Clostridium difficile QCD-37x79] gi|255654168|ref|ZP_05399577.1| 30S ribosomal protein S3 [Clostridium difficile QCD-23m63] gi|260681852|ref|YP_003213137.1| 30S ribosomal protein S3 [Clostridium difficile CD196] gi|260685450|ref|YP_003216583.1| 30S ribosomal protein S3 [Clostridium difficile R20291] gi|296449793|ref|ZP_06891562.1| 30S ribosomal protein S3 [Clostridium difficile NAP08] gi|296877857|ref|ZP_06901879.1| 30S ribosomal protein S3 [Clostridium difficile NAP07] gi|306518758|ref|ZP_07405105.1| 30S ribosomal protein S3 [Clostridium difficile QCD-32g58] gi|122974217|sp|Q18CG5|RS3_CLOD6 RecName: Full=30S ribosomal protein S3 gi|115249083|emb|CAJ66894.1| 30S ribosomal protein S3 [Clostridium difficile] gi|260208015|emb|CBA60197.1| 30S ribosomal protein S3 [Clostridium difficile CD196] gi|260211466|emb|CBE01590.1| 30S ribosomal protein S3 [Clostridium difficile R20291] gi|296261391|gb|EFH08217.1| 30S ribosomal protein S3 [Clostridium difficile NAP08] gi|296431157|gb|EFH16982.1| 30S ribosomal protein S3 [Clostridium difficile NAP07] Length = 271 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWFA E+G LL ED IR++L+ L AGVAKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ++ A+PG++IG+ G IE ++ +L MT I +++ EV + NA L+A++ Sbjct: 61 SANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +ERRV FRRAMK+A+Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 A IDYG A A+T YG GIKV++ + + D P E R Sbjct: 181 ADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPREESRKS 224 >gi|116667412|pdb|2GY9|C Chain C, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667464|pdb|2GYB|C Chain C, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|224510724|pdb|3FIH|C Chain C, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662219|pdb|2WWL|C Chain C, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387967|pdb|3OFO|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308387988|pdb|3OFP|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320025|pdb|3OFA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320046|pdb|3OFB|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320129|pdb|3OFX|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320150|pdb|3OFY|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113614|pdb|3OAQ|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113635|pdb|3OAR|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 206 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 109/206 (52%), Positives = 148/206 (71%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 60 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 120 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 180 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY T+ A T YG G+KV++ + Sbjct: 181 IDYNTSEAHTTYGVIGVKVWIFKGEI 206 >gi|306802322|ref|ZP_07438990.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu008] gi|308350987|gb|EFP39838.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu008] Length = 241 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|117924161|ref|YP_864778.1| 30S ribosomal protein S3P [Magnetococcus sp. MC-1] gi|152060871|sp|A0L5X9|RS3_MAGSM RecName: Full=30S ribosomal protein S3 gi|117607917|gb|ABK43372.1| SSU ribosomal protein S3P [Magnetococcus sp. MC-1] Length = 210 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 114/205 (55%), Positives = 153/205 (74%), Gaps = 1/205 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG TW++RWFA Y LL ED+KIR +L+ L A V+KI+IER Sbjct: 1 MGQKVHPTGFRLGTTKTWDTRWFAD-RNYADLLLEDIKIRAWLKKRLAHASVSKIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG+IIGKKG DIEK++ + +T+SE+ +++ E+ KPE +A L+A+++ Sbjct: 60 AQKARINIHTARPGIIIGKKGGDIEKLKNDIKAITSSEVQINIVEIRKPEADAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRR+MKRAV SAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRSMKRAVTSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 IDYG A A T YG G+KV+V Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWVYKG 204 >gi|113869425|ref|YP_727914.1| 30S ribosomal protein S3 [Ralstonia eutropha H16] gi|194291016|ref|YP_002006923.1| 30S ribosomal protein s3 [Cupriavidus taiwanensis LMG 19424] gi|122946539|sp|Q0K625|RS3_RALEH RecName: Full=30S ribosomal protein S3 gi|226697693|sp|B3R7R7|RS3_CUPTR RecName: Full=30S ribosomal protein S3 gi|113528201|emb|CAJ94546.1| SSU ribosomal protein S3 [Ralstonia eutropha H16] gi|193224851|emb|CAQ70862.1| 30S ribosomal subunit protein S3 [Cupriavidus taiwanensis LMG 19424] Length = 265 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 112/220 (50%), Positives = 160/220 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++R++L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTKFAGMLKEDIEVRDFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG + AET YG G+KV+V D + +D+ + Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQ 220 >gi|116624196|ref|YP_826352.1| 30S ribosomal protein S3P [Candidatus Solibacter usitatus Ellin6076] gi|122253088|sp|Q01W98|RS3_SOLUE RecName: Full=30S ribosomal protein S3 gi|116227358|gb|ABJ86067.1| SSU ribosomal protein S3P [Candidatus Solibacter usitatus Ellin6076] Length = 344 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 154/222 (69%), Gaps = 3/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWFA Y LL EDL+++ L+ LK AGV+ I ++R Sbjct: 1 MGQKVHPYGFRLGFNKPWRSRWFA-KQGYAKLLQEDLELKAALRERLKSAGVSSIEVDRP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ + ++RPG+IIG+KG +IEK+++ ++ T E+ + + EV KPE++A L+++SI Sbjct: 60 GNKLRVTIRTSRPGIIIGRKGAEIEKLKQDMAKKTKREVFIDIQEVHKPELDAQLVSESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM++AV SA+RFG G+KV SGRLNGAE++R+E YL+G++PL TLRA Sbjct: 120 ALQLEKRVAFRRAMRKAVDSALRFGCKGIKVRVSGRLNGAEIARSEWYLQGQLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE--VSDSDSTIPAAEH 220 IDYG A A T YG GIK ++ + ++ + +P E Sbjct: 180 DIDYGFAEAHTTYGVIGIKAWLYKGEILDLTKRRNLLPEPEP 221 >gi|52078615|ref|YP_077406.1| 30S ribosomal protein S3 [Bacillus licheniformis ATCC 14580] gi|52783977|ref|YP_089806.1| 30S ribosomal protein S3 [Bacillus licheniformis ATCC 14580] gi|319649110|ref|ZP_08003318.1| 30S ribosomal protein S3 [Bacillus sp. BT1B_CT2] gi|81691248|sp|Q65PA1|RS3_BACLD RecName: Full=30S ribosomal protein S3 gi|52001826|gb|AAU21768.1| ribosomal protein S3 (BS3) [Bacillus licheniformis ATCC 14580] gi|52346479|gb|AAU39113.1| RpsC [Bacillus licheniformis ATCC 14580] gi|317388810|gb|EFV69629.1| 30S ribosomal protein S3 [Bacillus sp. BT1B_CT2] Length = 218 Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIRE++ L A V+K+ IER Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREFINQRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+ +Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY T+ A+T YG G+KV++ + + T + Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218 >gi|312884697|ref|ZP_07744398.1| 30S ribosomal protein S3 [Vibrio caribbenthicus ATCC BAA-2122] gi|323495510|ref|ZP_08100584.1| 30S ribosomal protein S3 [Vibrio sinaloensis DSM 21326] gi|309367610|gb|EFP95161.1| 30S ribosomal protein S3 [Vibrio caribbenthicus ATCC BAA-2122] gi|323319391|gb|EGA72328.1| 30S ribosomal protein S3 [Vibrio sinaloensis DSM 21326] Length = 232 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIKV++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223 >gi|125975390|ref|YP_001039300.1| SSU ribosomal protein S3P [Clostridium thermocellum ATCC 27405] gi|256005323|ref|ZP_05430289.1| ribosomal protein S3 [Clostridium thermocellum DSM 2360] gi|281419352|ref|ZP_06250367.1| ribosomal protein S3 [Clostridium thermocellum JW20] gi|152060857|sp|A3DJH8|RS3_CLOTH RecName: Full=30S ribosomal protein S3 gi|125715615|gb|ABN54107.1| SSU ribosomal protein S3P [Clostridium thermocellum ATCC 27405] gi|255990759|gb|EEU00875.1| ribosomal protein S3 [Clostridium thermocellum DSM 2360] gi|281406972|gb|EFB37235.1| ribosomal protein S3 [Clostridium thermocellum JW20] gi|316939506|gb|ADU73540.1| ribosomal protein S3 [Clostridium thermocellum DSM 1313] Length = 226 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 146/220 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A + L ED KIR++++ L AG+++I IER Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKNFSEYLVEDFKIRKFIKNKLYSAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V++A+PGLIIGK G IE++RK+L MT I +++ E+ PE++A ++A++I Sbjct: 61 ANKVKINVHAAKPGLIIGKGGAGIEELRKQLEKMTQKNILINITEIKVPELDAQIVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+A+ AMR GA G+K SGR+ GAE++RTE Y EG +PLQTLRA Sbjct: 121 ASQLEKRISFRRAMKQAMARAMRLGAKGIKTAVSGRIAGAEIARTEHYHEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV++ + + E Sbjct: 181 DIDYGFAEANTTYGKLGVKVWIYKGEVLPAVKKDKGRKEE 220 >gi|88860953|ref|ZP_01135589.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas tunicata D2] gi|88817166|gb|EAR26985.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas tunicata D2] Length = 235 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 107/210 (50%), Positives = 150/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++ +L D K+R +L LK A V+KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYANTKDFPEMLFGDHKVRTFLTKELKAASVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++E+ KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRLVVSKIAGVPAQINISEIRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRIGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDY T+ A T YG G+KV++ + + Sbjct: 181 DIDYSTSEALTTYGIIGVKVWIFKGEVIGG 210 >gi|296113791|ref|YP_003627729.1| 30S ribosomal protein S3 [Moraxella catarrhalis RH4] gi|295921485|gb|ADG61836.1| 30S ribosomal protein S3 [Moraxella catarrhalis RH4] gi|326562136|gb|EGE12464.1| 30S ribosomal protein S3 [Moraxella catarrhalis 7169] gi|326564499|gb|EGE14725.1| 30S ribosomal protein S3 [Moraxella catarrhalis 46P47B1] gi|326565682|gb|EGE15845.1| 30S ribosomal protein S3 [Moraxella catarrhalis 12P80B1] gi|326566251|gb|EGE16403.1| 30S ribosomal protein S3 [Moraxella catarrhalis 103P14B1] gi|326567097|gb|EGE17219.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC1] gi|326568361|gb|EGE18441.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC7] gi|326572262|gb|EGE22257.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC8] gi|326574604|gb|EGE24544.1| 30S ribosomal protein S3 [Moraxella catarrhalis O35E] gi|326574860|gb|EGE24790.1| 30S ribosomal protein S3 [Moraxella catarrhalis 101P30B1] gi|326576184|gb|EGE26099.1| 30S ribosomal protein S3 [Moraxella catarrhalis CO72] Length = 240 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L D ++R +L+ L+ A V+ I IER Sbjct: 1 MGQKVHPIGIRLGVIKKHNANWYANPKQYSEYLLNDFQVRNFLRKKLEGAMVSHIYIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I ++SARPG+IIGKKG DIE ++K+L+ + +++ E+ +P+++A L+A+ I Sbjct: 61 TGAAKITIHSARPGIIIGKKGEDIESLQKELTKLMGVPAQVNIQEISQPDLDARLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAQGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST-IPAAEHR 221 IDY + AET YG+ G+KV++ + + +S P E + Sbjct: 181 DIDYASVRAETTYGTIGVKVWIFRSEVLDGMNSAYNPVVEDK 222 >gi|300742051|ref|ZP_07072072.1| ribosomal protein S3 [Rothia dentocariosa M567] gi|311111967|ref|YP_003983189.1| 30S ribosomal protein S3 [Rothia dentocariosa ATCC 17931] gi|300381236|gb|EFJ77798.1| ribosomal protein S3 [Rothia dentocariosa M567] gi|310943461|gb|ADP39755.1| 30S ribosomal protein S3 [Rothia dentocariosa ATCC 17931] Length = 265 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 108/222 (48%), Positives = 155/222 (69%), Gaps = 5/222 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKI+P FRLG+ S+WFA ++ Y + ED+KIRE L +L +AGVAK+ Sbjct: 1 MGQKIHPNGFRLGITTEHVSKWFADSNKPGERYADFVREDVKIRELLAKNLDRAGVAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVSNPDLSAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQSIAEQLAARVAFRRAMKKAIQSAQRAGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 TLRA+IDYG A+T +G G+KV++ D ++D + A Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD-LTDKELAAQQA 221 >gi|323706456|ref|ZP_08118017.1| ribosomal protein S3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534176|gb|EGB23966.1| ribosomal protein S3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 221 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 105/218 (48%), Positives = 155/218 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+GV+ W ++WFA+ ++ LL ED+KIR+Y++ + +GV KI IER Sbjct: 1 MGQKINPRGLRVGVSQDWYAKWFAKDKDFSDLLIEDIKIRDYIKNKIYASGVPKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I VY+A+PG++IGK G IE++R+++ MTN ++ +++ EV PE++A L+A++I Sbjct: 61 ANRIKIDVYTAKPGMVIGKGGAGIEELRQEIEKMTNKKVVINIVEVKNPELDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 ASQLERRISFRRAMKQSIARAMKQGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYG A A T YG G+KV+++ + + + A Sbjct: 181 NIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|289523363|ref|ZP_06440217.1| ribosomal protein S3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503055|gb|EFD24219.1| ribosomal protein S3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 224 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 99/214 (46%), Positives = 146/214 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ +RLGV W SRW+A + LHED+K+R++++ AG++ + IER Sbjct: 1 MGQKVHPVGYRLGVIRDWESRWYADKKNFAKQLHEDIKLRKWIKDRWGHAGISTVEIERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R +++ARPG++IGK G++I+++R +L MT S++ ++V E+ P+ NA ++A+ I Sbjct: 61 GNVIRFTIWTARPGVVIGKGGSEIQEVRDELQKMTGSKVMINVQEIKNPDKNAQIVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+A+ AM+ GA G+K SGRL GAE++R E YLEGR+PL TLRA Sbjct: 121 ASALERRVSFRRAMKQAIFRAMKAGALGIKTQCSGRLGGAEIARREWYLEGRLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A+T YG G+KV++ D + Sbjct: 181 DIDYGFAEAKTMYGVIGVKVWIYNGDVLPSLKEQ 214 >gi|256847769|ref|ZP_05553214.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN] gi|256715458|gb|EEU30434.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN] Length = 219 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 148/219 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A Y L+EDL+IR+Y++ L A V+ I IER Sbjct: 1 MGQKINPNGFRVGVIRPWSAKWYADKKHYAEYLNEDLRIRKYIEKRLADASVSTIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPG++IGK G+++E +R +L+ +T +H++V E+ KP+++A L+ +++ Sbjct: 61 ANRVNVSIHTARPGMVIGKGGSEVEALRLELNKLTGKRVHINVVEIKKPDLDAHLVGENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAM+ A+Q AMR GA G+K+ +GRLNGA++SR E Y +G VPL TLRA Sbjct: 121 AQQLENRIAFRRAMRGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDGTVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG+ GIK ++ + + + + + Sbjct: 181 DIDYSWDEARTTYGALGIKTWIYRGEVLPEKKNNSKGGK 219 >gi|184155985|ref|YP_001844325.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956] gi|227515493|ref|ZP_03945542.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931] gi|260662758|ref|ZP_05863652.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN] gi|183227329|dbj|BAG27845.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956] gi|227086106|gb|EEI21418.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931] gi|260552839|gb|EEX25838.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN] Length = 219 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 147/217 (67%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W ++W+A Y A L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KNYAAYLNEDLRIRKYIEKRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+N+TN +H++V E+ KP+++A L+ +S+ Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNNLTNKRVHINVVEIKKPDLDAHLVGESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM+ A+Q MR GA G+K+ +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 AEQLENRIAFRRAMRGAMQRTMRAGAKGIKIQVAGRLNGADMSRIESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDY A T YG GIK ++ + + + Sbjct: 180 DIDYSWDEAHTTYGVLGIKTWIYRGEVLPAKKNNEAK 216 >gi|257054476|ref|YP_003132308.1| 30S ribosomal protein S3P [Saccharomonospora viridis DSM 43017] gi|256584348|gb|ACU95481.1| SSU ribosomal protein S3P [Saccharomonospora viridis DSM 43017] Length = 286 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 143/211 (67%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVAEDVKIRKLLSTGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ I Sbjct: 60 RERVRVDIHTARPGIVIGRRGAEADRIRGALEKLTGKQVQLNILEVKNPEADAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q S G++V SGRL GAE+SR+E Y +GRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCSGRLGGAEMSRSEHYRDGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 A IDYG A T +G G+KV++ D + Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGDLIGG 210 >gi|237747371|ref|ZP_04577851.1| small subunit ribosomal protein S3 [Oxalobacter formigenes HOxBLS] gi|229378722|gb|EEO28813.1| small subunit ribosomal protein S3 [Oxalobacter formigenes HOxBLS] Length = 282 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 161/225 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + + +L+EDLK R YL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVARNWSSRWYAGNTNFAGMLNEDLKARAYLKKKLKNASVGQVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R +YS+RPG++IGKKG DIE ++ LS + +H+++ EV KPEI+A LIA SI Sbjct: 61 AKNARFTIYSSRPGVVIGKKGEDIEVLKSDLSRIMGVPVHVNIEEVRKPEIHAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAM+RA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMRRAMQNAMRLGAVGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + A+T YG G+KV+V D + + ++ + +K Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDRLENGEAPKIETPNEEDKK 225 >gi|304405610|ref|ZP_07387269.1| ribosomal protein S3 [Paenibacillus curdlanolyticus YK9] gi|304345649|gb|EFM11484.1| ribosomal protein S3 [Paenibacillus curdlanolyticus YK9] Length = 221 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 158/227 (69%), Gaps = 9/227 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+WFA G ++G LL ED+KIREYL+ LK A V++I IER Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWFA-GKDFGDLLIEDVKIREYLKNKLKDAAVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + + +A+PG++IGK G+++E +R +L+ +TN ++H+++ E+ +++A L+A+S Sbjct: 60 ANRVNVTINTAKPGMVIGKGGSEVENLRNQLAKITNGKKVHINITEIKHADLDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERR FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR Sbjct: 120 IAQQLERRTSFRRALKQAIQRTMRSGAKGIKTSVSGRLGGAEIARTEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYGTA A T YG G+KV++ + + PAA+ + ++ Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEIL-------PAAKKKAAQEG 219 >gi|262373515|ref|ZP_06066793.1| ribosomal protein S3 [Acinetobacter junii SH205] gi|262311268|gb|EEY92354.1| ribosomal protein S3 [Acinetobacter junii SH205] Length = 250 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226 >gi|299541938|ref|ZP_07052261.1| 30S ribosomal protein S3 [Lysinibacillus fusiformis ZC1] gi|298725676|gb|EFI66317.1| 30S ribosomal protein S3 [Lysinibacillus fusiformis ZC1] Length = 217 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK GT++E +RK LS++T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGTEVENLRKYLSDLTGKRVHINIIEIKRADLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +R GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRTIRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY A A+T YG G+KV++ + + S Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKS 212 >gi|226309814|ref|YP_002769708.1| 30S ribosomal protein S3 [Brevibacillus brevis NBRC 100599] gi|254764515|sp|C0ZII6|RS3_BREBN RecName: Full=30S ribosomal protein S3 gi|226092762|dbj|BAH41204.1| 30S ribosomal protein S3 [Brevibacillus brevis NBRC 100599] Length = 220 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 152/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ R+GV W S+W+A ++ LLHEDLKIR+Y++ LK A V+ I IER Sbjct: 1 MGQKVSPVGLRIGVIRDWESKWYAD-KDFATLLHEDLKIRKYVKGRLKDAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L+++T +H+++NE+ +P+++ATL+A++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVETLRKTLTDLTGKRVHININEIKRPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+++ +R GA G+K + SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAQKQSITRTLRSGAKGIKTLVSGRLGGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYGTA A T YG G+KV++ + + Sbjct: 180 DIDYGTAEAHTTYGRIGVKVWIYRGEVLPARK 211 >gi|254822781|ref|ZP_05227782.1| 30S ribosomal protein S3 [Mycobacterium intracellulare ATCC 13950] Length = 227 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSDYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|255319809|ref|ZP_05361014.1| ribosomal protein S3 [Acinetobacter radioresistens SK82] gi|262380342|ref|ZP_06073496.1| ribosomal protein S3 [Acinetobacter radioresistens SH164] gi|255303128|gb|EET82340.1| ribosomal protein S3 [Acinetobacter radioresistens SK82] gi|262297788|gb|EEY85703.1| ribosomal protein S3 [Acinetobacter radioresistens SH164] Length = 250 Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 112/228 (49%), Positives = 159/228 (69%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKSAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226 IDY T AET YG+ G+KV++ + + PA AE R ++ Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228 >gi|212634835|ref|YP_002311360.1| 30S ribosomal protein S3 [Shewanella piezotolerans WP3] gi|212556319|gb|ACJ28773.1| Ribosomal protein S3 [Shewanella piezotolerans WP3] Length = 229 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 155/226 (68%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T + +++ E+ KPE++A L+A I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGTPAQINIAEIRKPELDAKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE----VSDSDSTIPAAEHRV 222 IDY T+ + T YG G+KV+V + V + + + Sbjct: 181 DIDYSTSESHTQYGVIGVKVWVFKGEVLDGIVPQHEEPKQQPKRKP 226 >gi|50086209|ref|YP_047719.1| 30S ribosomal protein S3 [Acinetobacter sp. ADP1] gi|61215530|sp|Q6F7R8|RS3_ACIAD RecName: Full=30S ribosomal protein S3 gi|49532185|emb|CAG69897.1| 30S ribosomal protein S3 [Acinetobacter sp. ADP1] Length = 250 Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKSAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNSMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA + K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPQEERPAK 226 >gi|157960020|ref|YP_001500054.1| 30S ribosomal protein S3 [Shewanella pealeana ATCC 700345] gi|167626033|ref|YP_001676327.1| 30S ribosomal protein S3 [Shewanella halifaxensis HAW-EB4] gi|157845020|gb|ABV85519.1| ribosomal protein S3 [Shewanella pealeana ATCC 700345] gi|167356055|gb|ABZ78668.1| ribosomal protein S3 [Shewanella halifaxensis HAW-EB4] Length = 229 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 154/226 (68%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222 IDY T+ + T YG G+KV+V + + + + + Sbjct: 181 DIDYSTSESHTQYGVIGVKVWVFKGEVLDGVLPQHEEPKQQPKRKP 226 >gi|90962400|ref|YP_536316.1| 30S ribosomal protein S3 [Lactobacillus salivarius UCC118] gi|227891550|ref|ZP_04009355.1| 30S ribosomal protein S3 [Lactobacillus salivarius ATCC 11741] gi|301300212|ref|ZP_07206424.1| ribosomal protein S3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|123086755|sp|Q1WS96|RS3_LACS1 RecName: Full=30S ribosomal protein S3 gi|90821594|gb|ABE00233.1| SSU ribosomal protein S3P [Lactobacillus salivarius UCC118] gi|227866697|gb|EEJ74118.1| 30S ribosomal protein S3 [Lactobacillus salivarius ATCC 11741] gi|300215028|gb|ADJ79444.1| 30S ribosomal protein S3 [Lactobacillus salivarius CECT 5713] gi|300852153|gb|EFK79825.1| ribosomal protein S3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 218 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ + LHEDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKVNPTGLRVGIIRDWDAKWYAE-KDFASNLHEDLRIRKYIESKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I +++A+PG++IGK G+++EK+RK+L+N+T +H+++ E+ KP+++A L+ +SI Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVEKLRKELNNLTGKRVHINIVEIKKPDLDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAMK+A+Q MR GA G+KV +GRLNGA++SR E + EG VPL TLRA Sbjct: 120 AEQLENRVAFRRAMKQAIQRTMRAGAKGIKVQVAGRLNGADMSRVERFSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG G+K ++ + + + Sbjct: 180 DIDYSWVEAHTTYGKLGVKTWIYRGEVLPAKKENSKGGK 218 >gi|325288584|ref|YP_004264765.1| SSU ribosomal protein S3P [Syntrophobotulus glycolicus DSM 8271] gi|324963985|gb|ADY54764.1| SSU ribosomal protein S3P [Syntrophobotulus glycolicus DSM 8271] Length = 220 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 151/221 (68%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV +W RW+A YG LLHEDL+IR+++ L+QAGV K+ IER Sbjct: 1 MGQKVNPNGLRIGVIRSWEGRWYAD-KNYGDLLHEDLQIRKFVVQKLQQAGVPKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 ++ +++A+PG++IG+ GT++E +R+ L +T ++ +++ E+ KPE++A L+A+S Sbjct: 60 ANRVKVSIHAAKPGIVIGRGGTEVENLRRDLEKLTGGKQVAVNIVEIKKPELDAKLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQL++RV FRRAMK+ V +R G G+K+ SGRL GAE++RTE Y EG+VPL TLR Sbjct: 120 VAQQLKKRVSFRRAMKQTVGRTIRAGGQGIKISCSGRLGGAEIARTEWYNEGKVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A A+T YG G+KV++ + + + Sbjct: 180 ADIDYGFAEADTTYGKIGVKVWIYKGEVLPTKKAAQEEGGK 220 >gi|299143188|ref|ZP_07036268.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517673|gb|EFI41412.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 253 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 93/225 (41%), Positives = 146/225 (64%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+S+W+A + LL ED KIR+Y++ L AG++K+ IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYANKKNFADLLVEDNKIRKYIKKKLYTAGISKVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +A+PG++IG+ G +E++R +L +T + L++ E+ ++++ L+A++I Sbjct: 61 ANKVKVSISTAKPGMVIGRGGVGVEELRTELEKLTKKSVVLNIEEIKNQDLDSQLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERRV FRRAMK+A+Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 121 AESLERRVSFRRAMKQAIQRTMRAGALGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A+T YG G+KV++ + + + + Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPEKKDEKKNNRDNKRRR 225 >gi|222148372|ref|YP_002549329.1| 30S ribosomal protein S3 [Agrobacterium vitis S4] gi|221735360|gb|ACM36323.1| 30S ribosomal protein S3 [Agrobacterium vitis S4] Length = 226 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 144/215 (66%), Positives = 174/215 (80%), Gaps = 3/215 (1%) Query: 13 GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72 G+N TW+SRWFA +EYG LLHEDLKIR YL LKQAG+AK++IER HK CR+ ++SAR Sbjct: 2 GINRTWDSRWFADNAEYGKLLHEDLKIRAYLMDELKQAGIAKVVIERPHKKCRVTIHSAR 61 Query: 73 PGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132 PGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSIAQQLERR+ FRR Sbjct: 62 PGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSIAQQLERRIAFRR 121 Query: 133 AMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192 AMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA IDYG A A TA Sbjct: 122 AMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRADIDYGVAEATTA 181 Query: 193 YGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 YG CGIKV++ + E+ + D A+E R +E D+ Sbjct: 182 YGICGIKVWIF-KGEILEHDPM--ASERRALESDA 213 >gi|311744803|ref|ZP_07718599.1| 30S ribosomal protein S3 [Aeromicrobium marinum DSM 15272] gi|311311920|gb|EFQ81841.1| 30S ribosomal protein S3 [Aeromicrobium marinum DSM 15272] Length = 276 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 96/207 (46%), Positives = 147/207 (71%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG++ SRW+A Y + + ED+KIR+ L + +AG++++ IERT Sbjct: 1 MGQKINPHGFRLGISTDHKSRWYAD-KLYSSYVGEDVKIRKLLTKGMDRAGISRVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV +PE++A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKQPEMDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+ MR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSGRVQFRRAMRKAMQTTMRSGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 +DYG A+T +G G+KV++ + Sbjct: 180 DVDYGFYEAKTTFGRIGVKVWIYKGEV 206 >gi|254455646|ref|ZP_05069075.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211] gi|207082648|gb|EDZ60074.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211] Length = 226 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 151/208 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIREY++ ++ +GV+K++IERT Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIREYIKKNVINSGVSKVMIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 C + +Y++RPG +IGKKG+DI+KI+ LS T +E+ L++ EV KPE NA L+A++I Sbjct: 61 SNKCYVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTTNEVALNIKEVKKPETNAYLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE +G +P TLRA Sbjct: 121 AQQLVKRISYRRAMKRAMQSCIRLGARGIKVSVSGRLGGNEIARTEWLRDGSIPSHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY A A T YG GIKV++ + Sbjct: 181 DIDYAEAEALTTYGIIGIKVWIYKGEVF 208 >gi|255326848|ref|ZP_05367924.1| ribosomal protein S3 [Rothia mucilaginosa ATCC 25296] gi|283457551|ref|YP_003362134.1| 30S ribosomal protein S3 [Rothia mucilaginosa DY-18] gi|255296065|gb|EET75406.1| ribosomal protein S3 [Rothia mucilaginosa ATCC 25296] gi|283133549|dbj|BAI64314.1| ribosomal protein S3 [Rothia mucilaginosa DY-18] Length = 265 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 109/222 (49%), Positives = 156/222 (70%), Gaps = 5/222 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKI+P FRLG+ S+WFA ++ Y + ED+KIRE L +L +AGVAK+ Sbjct: 1 MGQKIHPNGFRLGITTDHVSKWFADSNKPGERYADFVREDVKIRELLAKNLDRAGVAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +TN +I L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTNKQIQLNILEVANPDLSAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQSIAEQLASRVAFRRAMKKAIQSAQRAGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 TLRA+IDYG A+T +G G+KV++ D ++D + A Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD-LTDKELAAQQA 221 >gi|221194416|ref|ZP_03567473.1| ribosomal protein S3 [Atopobium rimae ATCC 49626] gi|221185320|gb|EEE17710.1| ribosomal protein S3 [Atopobium rimae ATCC 49626] Length = 235 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLGV W SRW+A Y L DL IR YL+ L++A +A+I IER Sbjct: 1 MGQKVQPTGFRLGVTENWRSRWYAD-KNYAENLGNDLAIRSYLEKRLEKAAIARIDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 ++ ++SARPG++IGKKG +I ++++ + ++++ V EV +PE++A L+A Sbjct: 60 GDKVKVTIFSARPGIVIGKKGAEIDGLRADLERVAKVGKGQVNVDVIEVKRPELDANLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 +SIA+QLE+RV FRRAM++AVQSA + GA G+++ SGRLNGAE+ R E Y EGRVPL T Sbjct: 120 ESIAEQLEQRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLNGAEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA + YGTA A T G+CGIKV++ L +++ + PA E Sbjct: 180 LRAVVAYGTATARTTMGACGIKVWIYLGEKMPGQPAPNPALE 221 >gi|325000486|ref|ZP_08121598.1| ribosomal protein S3 [Pseudonocardia sp. P1] Length = 230 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 104/220 (47%), Positives = 149/220 (67%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED++IR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVKEDVEIRKMLSKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGNLEKLTKKQVQLNILEVKASESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPQVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A T++G G+KV++ D V PAAE Sbjct: 180 ADIDYGLFEARTSFGRIGVKVWIYKGDVVGGRREGAPAAE 219 >gi|319955862|ref|YP_004167125.1| SSU ribosomal protein s3p [Nitratifractor salsuginis DSM 16511] gi|319418266|gb|ADV45376.1| SSU ribosomal protein S3P [Nitratifractor salsuginis DSM 16511] Length = 230 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 153/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRW+ + + ED KIR++L+ L AGV+ I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWYPAKDRAPSFVAEDHKIRKFLKKELFFAGVSNIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI + +ARPG+IIGK+G DIEK++ KL M ++ +++ E +P+ +A L A++I Sbjct: 61 VKKIRITIVTARPGIIIGKRGADIEKLKAKLQKMLGKDVAINIKEEKRPQASAQLAAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+A+Q A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLERRVAFRRAMKKAIQGALKSGAKGIKVQVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A T YG+ G+KV++ + + P E + + Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQPEPKEERKSRK 224 >gi|254776901|ref|ZP_05218417.1| 30S ribosomal protein S3 [Mycobacterium avium subsp. avium ATCC 25291] Length = 224 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214 >gi|284992868|ref|YP_003411422.1| 30S ribosomal protein S3 [Geodermatophilus obscurus DSM 43160] gi|284066113|gb|ADB77051.1| ribosomal protein S3 [Geodermatophilus obscurus DSM 43160] Length = 308 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 142/208 (68%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR+ + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDYKSRWYAD-KLYKDYVKEDVAIRKLMSKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEADAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSA R G++V SGRL G E+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAQRSPQVKGIRVQCSGRLGGTEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 A+IDYG A T +G G+KV++ D Sbjct: 180 ANIDYGIYEARTTFGRIGVKVWIYKGDV 207 >gi|226953877|ref|ZP_03824341.1| 30S ribosomal protein S3 [Acinetobacter sp. ATCC 27244] gi|294651628|ref|ZP_06728932.1| 30S ribosomal protein S3 [Acinetobacter haemolyticus ATCC 19194] gi|226835360|gb|EEH67743.1| 30S ribosomal protein S3 [Acinetobacter sp. ATCC 27244] gi|292822477|gb|EFF81376.1| 30S ribosomal protein S3 [Acinetobacter haemolyticus ATCC 19194] Length = 250 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 IDY T AET YG+ G+KV++ + + PA K Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226 >gi|78776493|ref|YP_392808.1| 30S ribosomal protein S3 [Sulfurimonas denitrificans DSM 1251] gi|91207849|sp|Q30TV8|RS3_SULDN RecName: Full=30S ribosomal protein S3 gi|78497033|gb|ABB43573.1| SSU ribosomal protein S3P [Sulfurimonas denitrificans DSM 1251] Length = 241 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 115/226 (50%), Positives = 153/226 (67%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF A L ED KIR YL+ L AGV+ I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPNFKTAAAYLGEDHKIRTYLKKELYYAGVSNIVIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG+DIEK++ L + + +++ E K +I++ L+A+++ Sbjct: 61 AKRLRVTIIAARPGIIIGKKGSDIEKLKDTLQALVGKPLSVNIKEEKKAQISSQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q+A R GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVMQNAQRGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G+KV++ + ++ IPA +K+ Sbjct: 181 KIDYGFAEAHTTYGCIGVKVWIFKGEVLT---KGIPAEVKEEQQKE 223 >gi|94676477|ref|YP_588782.1| ribosomal protein S3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260548|sp|Q1LTD2|RS3_BAUCH RecName: Full=30S ribosomal protein S3 gi|94219627|gb|ABF13786.1| ribosomal protein S3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 233 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 108/219 (49%), Positives = 153/219 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ WNS W+A E+ L+ D K+R++L L +A +++++IER Sbjct: 1 MGQKVHPNGFRLGIIKYWNSTWYANKKEFAQYLNSDFKVRQFLASELTKASISRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +++ARPG+IIGKKG D+EK+RK +S + +++ EV KPE+NA L+A+SI Sbjct: 61 AKSIRITIHTARPGIIIGKKGEDVEKLRKSISLIAGVPSQINIAEVRKPELNAKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Q+ERRV+FRRAMKRAVQ+ +R GA G+KV SGRL+G E++RTE Y EGRVPL TLRA Sbjct: 121 VSQIERRVIFRRAMKRAVQNTIRLGAKGIKVEVSGRLSGVEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY + A T YG G+KV++ + + + P E Sbjct: 181 DIDYHVSEAHTTYGVIGVKVWIFKGEILDGMMAVEPTIE 219 >gi|312135490|ref|YP_004002828.1| 30S ribosomal protein S3 [Caldicellulosiruptor owensensis OL] gi|311775541|gb|ADQ05028.1| ribosomal protein S3 [Caldicellulosiruptor owensensis OL] Length = 222 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 149/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG W+SRWFA ++ + ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRLGFIRDWDSRWFANDKDFDKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKVAASEKGGDK 222 >gi|308233858|ref|ZP_07664595.1| ribosomal protein S3 [Atopobium vaginae DSM 15829] gi|328943566|ref|ZP_08241031.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829] gi|327491535|gb|EGF23309.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829] Length = 236 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 147/222 (66%), Gaps = 3/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRW+A + Y + DL+IR+YL+ L A ++++ IER Sbjct: 1 MGQKVQPTGFRLGITEQWRSRWYAGKNNYAQNVGSDLEIRKYLKKRLASAALSRVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 ++++ ++RPG++IGKKGT+I K +K++ + ++++ V E+ +P+++A L A Sbjct: 61 GDKVKVVILTSRPGIVIGKKGTEIDDLRKDVQKIAKVGKGDVNVEVVEIKQPDLDAQLTA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE RV FRRA+++AVQ A + GA G+++ SGRLNGAE+ R E EGRVPL T Sbjct: 121 DRIAEQLEGRVAFRRAVRKAVQGATKAGAKGIRIQCSGRLNGAEMGRVEWSREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA IDY A A T G+ GIKV++ L +++ + PA E Sbjct: 181 LRAKIDYAQATASTTMGAVGIKVWIYLGEKLPGQSAPNPALE 222 >gi|330470167|ref|YP_004407910.1| ribosomal protein S3 [Verrucosispora maris AB-18-032] gi|328813138|gb|AEB47310.1| ribosomal protein S3 [Verrucosispora maris AB-18-032] Length = 284 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 149/219 (68%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPMCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A+I+YG A T +G G+KV++ D V ++ A Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAP 218 >gi|262280219|ref|ZP_06058003.1| ribosomal protein S3 [Acinetobacter calcoaceticus RUH2202] gi|262257997|gb|EEY76731.1| ribosomal protein S3 [Acinetobacter calcoaceticus RUH2202] Length = 250 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLNKKLKNAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224 IDY T AET YG+ G+KV++ + + PA AE R + Sbjct: 181 DIDYATVRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226 >gi|291280142|ref|YP_003496977.1| 30S ribosomal protein S3 [Deferribacter desulfuricans SSM1] gi|290754844|dbj|BAI81221.1| 30S ribosomal protein S3 [Deferribacter desulfuricans SSM1] Length = 224 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 113/216 (52%), Positives = 158/216 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG+N W S WF EY L EDLKIR++L+ LKQAG++ I IER Sbjct: 1 MGQKVHPIGFRLGINKDWKSVWFFGKKEYREKLMEDLKIRDFLKKRLKQAGLSNIQIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RII+ ++RPG++IGKKG +IE ++K+L +T++++ + + EV KPEI+A L+A+++ Sbjct: 61 GSKVRIILNTSRPGIVIGKKGAEIENLKKELRKLTDNDVIIVIREVKKPEIDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERRV FRRAMK+AV A++ GA G+K+ SGRL GAE++RTE Y++GRVPLQTLRA Sbjct: 121 AMQIERRVAFRRAMKKAVLQALKGGAQGIKIACSGRLAGAEMARTEWYIKGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A+T YG G+KV++ + V + D Sbjct: 181 DIDYGFAEAQTTYGIIGVKVWIFKGEIVENKDKIAA 216 >gi|262203618|ref|YP_003274826.1| 30S ribosomal protein S3 [Gordonia bronchialis DSM 43247] gi|262086965|gb|ACY22933.1| ribosomal protein S3 [Gordonia bronchialis DSM 43247] Length = 272 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+AK+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRKLLSQGLERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNAESEAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGRREL 214 >gi|312622051|ref|YP_004023664.1| 30S ribosomal protein S3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202518|gb|ADQ45845.1| ribosomal protein S3 [Caldicellulosiruptor kronotskyensis 2002] Length = 222 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 98/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FR+G+ W+SRWFA ++ + ED KIR +++ L AG+++I IER Sbjct: 1 MGQKVHPKGFRIGIIRDWDSRWFANDKDFQKYVLEDYKIRRHIKEKLYHAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++ Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG G+K ++ D + + + Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222 >gi|238018629|ref|ZP_04599055.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748] gi|237865100|gb|EEP66390.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748] Length = 221 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 155/219 (70%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++A L+A++I Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDAILVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A T YG GIKV++ + + ++ E Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218 >gi|302336376|ref|YP_003801583.1| SSU ribosomal protein S3P [Olsenella uli DSM 7084] gi|301320216|gb|ADK68703.1| SSU ribosomal protein S3P [Olsenella uli DSM 7084] Length = 236 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 101/222 (45%), Positives = 150/222 (67%), Gaps = 3/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRW+A +Y L DL+IR +L+ L A ++++ IER Sbjct: 1 MGQKVQPTGFRLGITEEWRSRWYADKKDYAKSLGNDLEIRRFLEKRLASAALSRVDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 ++++Y+ARPG++IGKKG +I+ +R L + I++ V EV +PE++A L+A Sbjct: 61 GDKVKVVIYTARPGIVIGKKGAEIDALRADLQKLAGVDKGNINVDVIEVKRPELDAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 +SIA+QLE R+ FRRA+++A+QSA + GA G+++ SGRLNGAE+ R E EGRVPL T Sbjct: 121 RSIAEQLEGRIAFRRAVRKAIQSARKAGAKGIRIQCSGRLNGAEMGRREWSREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA I +GTA A T G+CG+KV++ L +++ + PA E Sbjct: 181 LRARIGFGTATARTTMGACGVKVWIYLGEKLPGQPAPNPALE 222 >gi|299820961|ref|ZP_07052850.1| 30S ribosomal protein S3 [Listeria grayi DSM 20601] gi|299817982|gb|EFI85217.1| 30S ribosomal protein S3 [Listeria grayi DSM 20601] Length = 218 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 92/219 (42%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+S+W+A +Y LHEDL+IR+++ L A V+++ IER Sbjct: 1 MGQKVHPIGMRIGIIRDWDSKWYAE-KDYADFLHEDLRIRDHITKRLADASVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNDLTGKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + + + + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 218 >gi|169335635|ref|ZP_02862828.1| hypothetical protein ANASTE_02055 [Anaerofustis stercorihominis DSM 17244] gi|169258373|gb|EDS72339.1| hypothetical protein ANASTE_02055 [Anaerofustis stercorihominis DSM 17244] Length = 213 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 148/211 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A+ ++G L ED IR+Y++ G+++I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAKDKDFGDTLVEDYNIRKYIKTTQYNTGISRIEIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +I +Y+ +PG IIGK G+ IE +RK+L MT +++++ EV + +A L+A++I Sbjct: 61 GEKIKIFIYTGKPGKIIGKAGSGIEAVRKQLQKMTGKNVYINIIEVKNVDCDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMK+A+ A+R GA+G+K SGR+NGAE++RTE Y +G VPLQTLRA Sbjct: 121 AQQLERRISFRRAMKQAIGRALRGGAEGIKTSVSGRVNGAEMARTEQYSDGNVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV+++ + + Sbjct: 181 DIDYGFAEADTTYGKIGVKVWINKGEVLPTK 211 >gi|306966729|ref|ZP_07479390.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu009] gi|308355583|gb|EFP44434.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu009] Length = 277 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+ R+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMRRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214 >gi|268316414|ref|YP_003290133.1| 30S ribosomal protein S3 [Rhodothermus marinus DSM 4252] gi|262333948|gb|ACY47745.1| ribosomal protein S3 [Rhodothermus marinus DSM 4252] Length = 249 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 110/217 (50%), Positives = 160/217 (73%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLGV W S W+A + L ED +IR YLQ LK+AG+++++IERT Sbjct: 1 MGQKTHPIGFRLGVIRGWFSSWYAE-KDLPEKLIEDEEIRRYLQARLKRAGLSRVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + ++++RPG++IG+ G ++EK+R++L +T EI ++++E+ +PE++A+L+AQ+I Sbjct: 60 PKRVILTLHTSRPGVVIGRGGQEVEKLREELQKLTGKEIQINISEIKRPELDASLVAQNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK+A+ +AMR GA G+++ SGRL GAE+SRTE YLEGRVPL TLRA Sbjct: 120 AQQLEGRVSFRRAMKQAITAAMRMGAQGIRIKVSGRLGGAEMSRTEQYLEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 +IDY A A T YG+ G+KV++ L + + D + A Sbjct: 180 NIDYAQATAYTIYGTIGVKVWIFLGEIIGKPDLSPNA 216 >gi|291518039|emb|CBK73260.1| SSU ribosomal protein S3P [Butyrivibrio fibrisolvens 16/4] Length = 220 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 96/220 (43%), Positives = 143/220 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A G + L ED IR++L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEGENFSDYLVEDYNIRKFLKKKLYAAGVSKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ VY+A+PG++IGK G +I+KI+ +L T+ ++ + + E+ +P+ +A L+A++I Sbjct: 61 AGRVKVTVYTAKPGVVIGKGGAEIDKIKTELQKQTSDKLVVDIKEIKRPDRDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + AM+ G G+K SGRL GA+++R+E Y EG +PLQTLRA Sbjct: 121 AGQLENRVSFRRAMKSCMGRAMKTGIKGIKTSCSGRLGGADMARSESYNEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A+T YG G+KV++ + + + Sbjct: 181 DIDYGFAEADTTYGKVGVKVWIYKGEVLPSKKKNVEGGAE 220 >gi|291613242|ref|YP_003523399.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1] gi|291583354|gb|ADE11012.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1] Length = 238 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 119/230 (51%), Positives = 161/230 (70%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRL V W S+W++ + LL +D+++R+YL+ L AGV+KI+IER Sbjct: 1 MGQKIHPIGFRLSVQKNWTSKWYSNSKHFSELLLKDIEVRDYLKKKLAGAGVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 KN +I +Y+ARPG++IGKKG DIE +R +L ++ L++ EV KPE++A LIA S Sbjct: 61 AKNAKITIYTARPGVVIGKKGEDIESLRNELKKRMGLPDVGLNIEEVRKPEVDAQLIADS 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 I QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLR Sbjct: 121 ITQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP---AAEHRVVEKD 226 A IDYGT+ A T YG G+KV+V D V+ A + V K Sbjct: 181 ADIDYGTSEALTTYGLIGVKVWVYKGDHVAGQQEAAAPVVAEPEKKVRKS 230 >gi|271962638|ref|YP_003336834.1| 30S ribosomal protein S3P [Streptosporangium roseum DSM 43021] gi|270505813|gb|ACZ84091.1| SSU ribosomal protein S3P [Streptosporangium roseum DSM 43021] Length = 288 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 98/206 (47%), Positives = 146/206 (70%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + + ED+ IR L+ +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKSYVAEDVAIRRMLKKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ + Sbjct: 60 TDRVQVDIHTARPGIVIGRRGAEADRIRGDLEKLTKKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYG A T +G G+KV++ + Sbjct: 180 DIDYGLYEARTTFGRIGVKVWIYKGE 205 >gi|116628592|ref|YP_821211.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMD-9] gi|122266814|sp|Q03IF7|RS3_STRTD RecName: Full=30S ribosomal protein S3 gi|116101869|gb|ABJ67015.1| SSU ribosomal protein S3P [Streptococcus thermophilus LMD-9] gi|312279253|gb|ADQ63910.1| Methyltransferase small [Streptococcus thermophilus ND03] Length = 217 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I I R Sbjct: 1 MGQKVHPIGLRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIVRA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEAHTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|37912986|gb|AAR05315.1| ribosomal protein S3 [uncultured marine alpha proteobacterium HOT2C01] Length = 223 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 124/207 (59%), Positives = 155/207 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL +N W SRW+A E+G+ L EDLKIR YL+ LK VAKI IER Sbjct: 1 MGQKVNPIGLRLILNKKWQSRWYAGKKEFGSFLQEDLKIRAYLEKKLKNCAVAKIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K ++ +YSARPGLIIGKKG+DIEK++KK+S T+ E+ +++ E+ KPE+ A LIA I Sbjct: 61 AKKAQVTIYSARPGLIIGKKGSDIEKLKKKISEFTSDEVSINLVEIRKPEVEAQLIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERRV FRRAMKR+VQSAMR GADG++V GRL G E++RTE Y EGRVPL T RA Sbjct: 121 AEQLERRVSFRRAMKRSVQSAMRLGADGIRVNCGGRLGGTEIARTEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 ++DY A A+T YGSCGIKV++ D Sbjct: 181 NVDYAVATAQTTYGSCGIKVWIYKGDI 207 >gi|319443059|ref|ZP_07992215.1| 30S ribosomal protein S3 [Corynebacterium variabile DSM 44702] Length = 249 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 106/223 (47%), Positives = 149/223 (66%), Gaps = 2/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W SRW+A +Y L ED+KIRE+L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIREFLSKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV + NA L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGRLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDYGT A T +G G+KV++ D V ++ A Sbjct: 180 AEIDYGTYEARTTFGRIGVKVWIYKGDVVGGRRESLLNARDER 222 >gi|260549834|ref|ZP_05824050.1| ribosomal protein S3 [Acinetobacter sp. RUH2624] gi|293610830|ref|ZP_06693130.1| 30S ribosomal protein S3 [Acinetobacter sp. SH024] gi|260407084|gb|EEX00561.1| ribosomal protein S3 [Acinetobacter sp. RUH2624] gi|292827174|gb|EFF85539.1| 30S ribosomal protein S3 [Acinetobacter sp. SH024] Length = 250 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224 IDY T AET YG+ G+KV++ + + PA AE R + Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226 >gi|325267183|ref|ZP_08133850.1| 30S ribosomal protein S3 [Kingella denitrificans ATCC 33394] gi|324981346|gb|EGC16991.1| 30S ribosomal protein S3 [Kingella denitrificans ATCC 33394] Length = 233 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 156/226 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRL VN W+S+WFA+ +E+ +L +D+ +R YL HL A V +++IER Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTEFATVLKQDIDVRTYLSKHLADASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +++ARPG++IG+KG IE +++ L + +H+++ E+ KPE++A LIA I Sbjct: 61 AKSARITIHTARPGVVIGQKGAGIEVLKRDLEKLLGVAVHVNIEEIRKPELDAQLIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA GVK++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGVKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY T+ A T YG G+KV+V + R K Sbjct: 181 DVDYATSEALTTYGIIGLKVWVYKGEMGQVQAQPAERENRRNHRKG 226 >gi|312144241|ref|YP_003995687.1| ribosomal protein S3 [Halanaerobium sp. 'sapolanicus'] gi|311904892|gb|ADQ15333.1| ribosomal protein S3 [Halanaerobium sp. 'sapolanicus'] Length = 213 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 152/213 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++W+A +Y LL ED +IR +++ + +AG+++I+IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYADKQDYSKLLKEDQEIRNHVKEKMYEAGISRIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V++ARPG++IG+ G+++E +R ++ +T + ++V EV PE+NA L+A++I Sbjct: 61 ANRLKLDVHTARPGMVIGRGGSEVEALRNEVETLTGRTVQINVVEVEDPEMNAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RR+ FRRAMK+A+ AMR GA+G KV +SGRL GAE++R E Y +G VPL TLRA Sbjct: 121 AAQLVRRISFRRAMKQALNRAMRMGAEGFKVQSSGRLGGAEMARREGYSQGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDYG A A+T YG+ G+KV+++ + + + D Sbjct: 181 DIDYGFAEADTTYGTIGVKVWINKGEILPEIDE 213 >gi|294789229|ref|ZP_06754468.1| ribosomal protein S3 [Simonsiella muelleri ATCC 29453] gi|294482970|gb|EFG30658.1| ribosomal protein S3 [Simonsiella muelleri ATCC 29453] Length = 233 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 163/226 (72%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRL VN W+S+WFA+ +E+ A+L +D+ +REYL L A V +++IER Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTEFAAVLKQDIDVREYLSKRLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +++ARPG++IG+KG DIE +++ L + +H+++ E+ KPE++A LIA I Sbjct: 61 AKSARITIHTARPGVVIGQKGADIEVLKRDLEKLLGVAVHVNIEEIRKPELDAQLIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY T+ A T YG G+KV+V + E+ + E+R + Sbjct: 181 DVDYATSEALTTYGIIGLKVWVY-KGEMGQVQAQPEQRENRRNNRK 225 >gi|289209323|ref|YP_003461389.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix] gi|288944954|gb|ADC72653.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix] Length = 226 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 110/212 (51%), Positives = 150/212 (70%), Gaps = 3/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W++ W+A G E+G L+ D+K+RE+LQ L A V++I I R Sbjct: 1 MGQKVHPTGIRLGISRPWSATWYADGREFGETLNNDIKLREFLQKKLAHASVSRISISRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIA 117 K I + +ARPG++IGKKG DIEK+R+ ++ + + +++ EV KPEI A L+A Sbjct: 61 AKAAHITIQTARPGIVIGKKGEDIEKLRQDVARETGLEKGTVKINIEEVRKPEIEAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLERR++FRRAMKRAV +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL T Sbjct: 121 EGIAQQLERRIMFRRAMKRAVGNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 LRA IDYG A A T YG G+KV++ + Sbjct: 181 LRADIDYGFAEARTTYGIIGVKVWIFKGEVFG 212 >gi|15612703|ref|NP_241006.1| 30S ribosomal protein S3 [Bacillus halodurans C-125] gi|7388207|sp|Q9Z9K8|RS3_BACHD RecName: Full=30S ribosomal protein S3 gi|4512410|dbj|BAA75277.1| rpsC homologue (identity of 87% to B. subtilis ) [Bacillus halodurans] gi|10172752|dbj|BAB03859.1| 30S ribosomal protein S3 [Bacillus halodurans C-125] Length = 219 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 102/217 (47%), Positives = 149/217 (68%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+GV W S+W+A +Y LLHED+KIREY++ LK A V+KI IER Sbjct: 1 MGQKVNPVGLRVGVIRDWESKWYAE-KDYADLLHEDIKIREYIENRLKDASVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + +A+PG++IGK G+++E +RK L+ +T +H+++ EV + +++A L+A++I Sbjct: 60 ANRVNITISTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIFEVKQADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAMKQAIQRTMRAGAQGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDYGTA A+T YG G+K+++ + + Sbjct: 180 DIDYGTAEADTTYGKLGVKIWIYRGEVLPTKGKNKKE 216 >gi|158317785|ref|YP_001510293.1| 30S ribosomal protein S3 [Frankia sp. EAN1pec] gi|226697714|sp|A8LC50|RS3_FRASN RecName: Full=30S ribosomal protein S3 gi|158113190|gb|ABW15387.1| ribosomal protein S3 [Frankia sp. EAN1pec] Length = 325 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSKGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A T +G G+KV++ D V Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >gi|71065065|ref|YP_263792.1| 30S ribosomal protein S3 [Psychrobacter arcticus 273-4] gi|91207834|sp|Q4FUF0|RS3_PSYA2 RecName: Full=30S ribosomal protein S3 gi|71038050|gb|AAZ18358.1| SSU ribosomal protein S3P [Psychrobacter arcticus 273-4] Length = 242 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 106/224 (47%), Positives = 152/224 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L D+++REYL+ L A ++KI+IER Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYASPKQYSEYLINDIQVREYLRKKLDSAMISKIMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I + +ARPG++IGKKG DIE+++K+L+ M +++ E+ P+++A L+A+ I Sbjct: 61 TGAAKITIATARPGIVIGKKGEDIERLQKELTKMMGVPAQVNIEEITSPDLDAHLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAKGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY + AET YG+ G+KV++ + + +S + Sbjct: 181 DIDYSSVRAETTYGTIGVKVWIFRGEILDGMNSVYNPVKEEQTR 224 >gi|110833264|ref|YP_692123.1| 30S ribosomal protein S3 [Alcanivorax borkumensis SK2] gi|254427789|ref|ZP_05041496.1| ribosomal protein S3 [Alcanivorax sp. DG881] gi|123345807|sp|Q0VSJ7|RS3_ALCBS RecName: Full=30S ribosomal protein S3 gi|110646375|emb|CAL15851.1| 30S ribosomal protein S3 [Alcanivorax borkumensis SK2] gi|196193958|gb|EDX88917.1| ribosomal protein S3 [Alcanivorax sp. DG881] Length = 230 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ RLG+ NS W+A Y L DL++REYL LK A V++I IER Sbjct: 1 MGQKVHPVGIRLGIVKEHNSLWYAGPKSYSDCLVTDLQVREYLFKRLKSASVSRIKIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI + +ARPG++IGKKG D+E++R+ ++ +H+++ EV KP+++A L+ ++ Sbjct: 61 SENVRITIATARPGIVIGKKGEDVERLRRDVAAKMGVPVHINIEEVRKPDLDARLVGDNV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AM+ GA+G+++ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMKSGAEGIRIQLSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY + AET YG+ G+KV++ + + + + K Sbjct: 181 DIDYASVRAETTYGTIGVKVWIFRGEVLGGMEQVQEEQKQSKGAKK 226 >gi|288554731|ref|YP_003426666.1| 30S ribosomal protein S3 [Bacillus pseudofirmus OF4] gi|288545891|gb|ADC49774.1| 30S ribosomal protein S3 [Bacillus pseudofirmus OF4] Length = 219 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 103/211 (48%), Positives = 148/211 (70%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+GV W S+W+A +Y LLHED+KIREY++ LK A V+K+ IER Sbjct: 1 MGQKINPTGLRVGVIKDWESKWYAE-KDYADLLHEDIKIREYIEKRLKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V +A+PG++IGK G+++E +RK L+ +T +H+++ EV + +++A L+A++I Sbjct: 60 ANRVNVTVSTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIFEVKQADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRISFRRAMKQAIQRTMRSGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYGTA A+T YG GIK+++ + + Sbjct: 180 DIDYGTAEADTTYGKLGIKIWIYRGEVLPTK 210 >gi|258406179|ref|YP_003198921.1| 30S ribosomal protein S3 [Desulfohalobium retbaense DSM 5692] gi|257798406|gb|ACV69343.1| ribosomal protein S3 [Desulfohalobium retbaense DSM 5692] Length = 213 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 105/211 (49%), Positives = 150/211 (71%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+R +Y ++ED +IR Y++ L AG++ + IER+ Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFSR-KDYPQYVYEDRQIRNYVKSKLYHAGLSSLEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KG +IEK+R L + + VNE+ +PE NA L+A+++ Sbjct: 60 ASKLRLIIHTARPGIVIGRKGVEIEKLRNDLKKKFKRDFSIEVNEIRRPETNAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR + A +FGA+G+K+ SGRL GA+++RTE + EGRVPLQTLRA Sbjct: 120 AMQLERRVAFRRAMKRTISLARKFGAEGIKISCSGRLGGADIARTEWFREGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 +DYG AVA T YG G+KV++ + + D Sbjct: 180 DLDYGYAVARTTYGVIGVKVWIFRGEILDDE 210 >gi|323144970|ref|ZP_08079530.1| ribosomal protein S3 [Succinatimonas hippei YIT 12066] gi|322415249|gb|EFY06023.1| ribosomal protein S3 [Succinatimonas hippei YIT 12066] Length = 269 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 106/221 (47%), Positives = 154/221 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ ++S W+A + + A + D +R+YL LK V+KI+I+R Sbjct: 1 MGQKVNPIGIRLGITKPYSSVWYASTANFPANIKSDSAVRKYLFEELKNDSVSKIVIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RKK++ + ++++EV KP+++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKKIAEIAGVPAQVNISEVRKPDLDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMK+A+Q+AMR GA G+KV SGRL GAE++R+E EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKKAIQNAMRVGAKGIKVEVSGRLGGAEIARSEWLREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY + A T YG G+KV++ + + + T E R Sbjct: 181 DIDYAISEAVTTYGVIGVKVWIFKGEVLGNLPLTQEEPEDR 221 >gi|85374459|ref|YP_458521.1| 30S ribosomal protein S3 [Erythrobacter litoralis HTCC2594] gi|123293711|sp|Q2N9B7|RS3_ERYLH RecName: Full=30S ribosomal protein S3 gi|84787542|gb|ABC63724.1| ribosomal protein S3 [Erythrobacter litoralis HTCC2594] Length = 231 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 128/218 (58%), Positives = 162/218 (74%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL +N TW+SRW+A G+ Y LL ED++IR+Y+ QA ++K++IER Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGNAYAKLLAEDIEIRKYILETAAQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI +Y+ARPG+IIGKKG DIEK+R+KLS MT SE+ L++ E+ KPEI+A L+AQ I Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRQKLSTMTESEVKLNIVEIRKPEIDAKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRA+QSAMR GA+G+K++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLIRRVAFRRAMKRAMQSAMRLGAEGIKIVCGGRLGGAEIARVEQYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDY A A TAYG GIKV+V + E+ D T Sbjct: 181 NIDYAEAEALTAYGIIGIKVWVF-KGEILGHDPTAQDR 217 >gi|19551752|ref|NP_599754.1| 30S ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032] gi|62389407|ref|YP_224809.1| 30S ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032] gi|145294665|ref|YP_001137486.1| 30S ribosomal protein S3 [Corynebacterium glutamicum R] gi|27734499|sp|Q8NT01|RS3_CORGL RecName: Full=30S ribosomal protein S3 gi|152060858|sp|A4QBI7|RS3_CORGB RecName: Full=30S ribosomal protein S3 gi|21323279|dbj|BAB97907.1| Ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032] gi|41324741|emb|CAF19223.1| 30S RIBOSOMAL PROTEIN S3 [Corynebacterium glutamicum ATCC 13032] gi|140844585|dbj|BAF53584.1| hypothetical protein [Corynebacterium glutamicum R] Length = 248 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 109/228 (47%), Positives = 152/228 (66%), Gaps = 3/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S W+A Y + ED+KIRE+L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-KSYADYVAEDIKIREFLSKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T ++ L++ EV + NA L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKQVALNILEVKNVDANAKLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226 A IDYGT A T +G G+KV++ D V +S I A R D Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAERRGRGD 227 >gi|25027084|ref|NP_737138.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314] gi|259506787|ref|ZP_05749687.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314] gi|27734492|sp|P59181|RS3_COREF RecName: Full=30S ribosomal protein S3 gi|23492364|dbj|BAC17338.1| putative 30S ribosomal protein S3 [Corynebacterium efficiens YS-314] gi|259165658|gb|EEW50212.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314] Length = 248 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 108/228 (47%), Positives = 152/228 (66%), Gaps = 3/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S W+A Y + ED+KIR++L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-QSYADYVAEDIKIRDFLSKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T ++ L++ EV + NA L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKQVALNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226 A IDYGT A T +G G+KV++ D V +S I A R D Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAERRGRGD 227 >gi|91763166|ref|ZP_01265130.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002] gi|91717579|gb|EAS84230.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002] Length = 226 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIR Y++ ++ +GV+K++IERT Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIRAYIKKNVVNSGVSKVMIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 C + +Y++RPG +IGKKG+DI+KI+ LS TN+E+ L++ EV KPE NA L+A++I Sbjct: 61 SNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTNNEVTLNIKEVKKPETNAYLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE EG +P TLRA Sbjct: 121 AQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGGNEIARTEWLREGSIPSHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVE 224 IDY A A T +G GIK+++ + + T A V E Sbjct: 181 DIDYAEAEALTTFGIIGIKIWIYKGEVFAKEFSQETNKIAPKEVKE 226 >gi|205372063|ref|ZP_03224880.1| 30S ribosomal protein S3 [Bacillus coahuilensis m4-4] Length = 218 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W S+W+A G +Y LLHEDLK+REY+ L A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYA-GKDYADLLHEDLKVREYVAKRLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRINISIHTAKPGMVIGKGGTEVEALRKALTELTKKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+++Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQSIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + + + Sbjct: 180 DIDYAHEEADTTYGKLGVKVWIYRGEVLPTKRKSQEGGK 218 >gi|222150451|ref|YP_002559604.1| 30S ribosomal protein S3 [Macrococcus caseolyticus JCSC5402] gi|222119573|dbj|BAH16908.1| 30S ribosomal protein S3 [Macrococcus caseolyticus JCSC5402] Length = 217 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 101/214 (47%), Positives = 152/214 (71%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W+++WFA ++ LLHEDLK+R+Y++ +LK A V+++ IER Sbjct: 1 MGQKINPIGLRVGIIRDWDAKWFAE-KDFATLLHEDLKVRKYIEENLKDASVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R L+++T +H++V EV K +++A L+A++I Sbjct: 60 ANRVNIAIHTGKPGMVIGKGGSEIEKLRNNLNSLTGKRVHINVVEVKKVDMDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + S+ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKSS 213 >gi|261854956|ref|YP_003262239.1| ribosomal protein S3 [Halothiobacillus neapolitanus c2] gi|261835425|gb|ACX95192.1| ribosomal protein S3 [Halothiobacillus neapolitanus c2] Length = 224 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 106/212 (50%), Positives = 156/212 (73%), Gaps = 3/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG++ W SRW+A + L++D++ R +++ LK+A V++I IER Sbjct: 1 MGQKVHPVGFRLGISSDWTSRWYADSKLFPVQLNQDVRTRAFIKDKLKEASVSRIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 ++ + +++ARPG++IG+KG DIE++R +++ M + + LSV E+ KPE++A L+A Sbjct: 61 ARSASVTIHTARPGIVIGRKGEDIERLRGEIAPMLGVDRNAVKLSVEEIRKPELDAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 +SIAQQLERR++FRRAMKRAVQ++MR GA G+KV SGRL GAE++R E Y EGRVPL T Sbjct: 121 ESIAQQLERRIMFRRAMKRAVQTSMRLGAGGIKVNVSGRLGGAEIARNEWYREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 LRA IDYG A A+T YG G+KV++ + Sbjct: 181 LRADIDYGFAEAQTTYGVIGVKVWIFKGEVFG 212 >gi|16801836|ref|NP_472104.1| 30S ribosomal protein S3 [Listeria innocua Clip11262] gi|16804664|ref|NP_466149.1| 30S ribosomal protein S3 [Listeria monocytogenes EGD-e] gi|46908798|ref|YP_015187.1| 30S ribosomal protein S3 [Listeria monocytogenes str. 4b F2365] gi|116873992|ref|YP_850773.1| 30S ribosomal protein S3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217966175|ref|YP_002351853.1| ribosomal protein S3 [Listeria monocytogenes HCC23] gi|224499299|ref|ZP_03667648.1| 30S ribosomal protein S3 [Listeria monocytogenes Finland 1988] gi|224503580|ref|ZP_03671887.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL R2-561] gi|226225171|ref|YP_002759278.1| ribosomal protein S3 [Listeria monocytogenes Clip81459] gi|254825013|ref|ZP_05230014.1| ribosomal protein S3 [Listeria monocytogenes FSL J1-194] gi|254829075|ref|ZP_05233762.1| ribosomal protein S3 [Listeria monocytogenes FSL N3-165] gi|254830942|ref|ZP_05235597.1| 30S ribosomal protein S3 [Listeria monocytogenes 10403S] gi|254854168|ref|ZP_05243516.1| ribosomal protein S3 [Listeria monocytogenes FSL R2-503] gi|254899923|ref|ZP_05259847.1| 30S ribosomal protein S3 [Listeria monocytogenes J0161] gi|254912871|ref|ZP_05262883.1| 30S ribosomal protein S3 [Listeria monocytogenes J2818] gi|254931104|ref|ZP_05264463.1| ribosomal protein S3 [Listeria monocytogenes HPB2262] gi|254937251|ref|ZP_05268948.1| ribosomal protein S3 [Listeria monocytogenes F6900] gi|254991848|ref|ZP_05274038.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J2-064] gi|255026653|ref|ZP_05298639.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J2-003] gi|255028281|ref|ZP_05300232.1| 30S ribosomal protein S3 [Listeria monocytogenes LO28] gi|255519646|ref|ZP_05386883.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J1-175] gi|284800488|ref|YP_003412353.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5578] gi|284993674|ref|YP_003415442.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5923] gi|289435892|ref|YP_003465764.1| hypothetical protein lse_2531 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|290891811|ref|ZP_06554808.1| rpsC protein [Listeria monocytogenes FSL J2-071] gi|300763623|ref|ZP_07073621.1| ribosomal protein S3 [Listeria monocytogenes FSL N1-017] gi|315304945|ref|ZP_07875040.1| ribosomal protein S3 [Listeria ivanovii FSL F6-596] gi|54039501|sp|P66549|RS3_LISIN RecName: Full=30S ribosomal protein S3 gi|54041958|sp|P66548|RS3_LISMO RecName: Full=30S ribosomal protein S3 gi|61215603|sp|Q71WF2|RS3_LISMF RecName: Full=30S ribosomal protein S3 gi|123458737|sp|A0ALW2|RS3_LISW6 RecName: Full=30S ribosomal protein S3 gi|16412114|emb|CAD00704.1| ribosomal protein S3 [Listeria monocytogenes EGD-e] gi|16415311|emb|CAC98001.1| ribosomal protein S3 [Listeria innocua Clip11262] gi|46882071|gb|AAT05364.1| ribosomal protein S3 [Listeria monocytogenes serotype 4b str. F2365] gi|116742870|emb|CAK21994.1| ribosomal protein S3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|217335445|gb|ACK41239.1| ribosomal protein S3 [Listeria monocytogenes HCC23] gi|225877633|emb|CAS06347.1| ribosomal protein S3 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601485|gb|EEW14810.1| ribosomal protein S3 [Listeria monocytogenes FSL N3-165] gi|258607560|gb|EEW20168.1| ribosomal protein S3 [Listeria monocytogenes FSL R2-503] gi|258609857|gb|EEW22465.1| ribosomal protein S3 [Listeria monocytogenes F6900] gi|284056050|gb|ADB66991.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5578] gi|284059141|gb|ADB70080.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5923] gi|289172136|emb|CBH28682.1| rpsC [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|290558405|gb|EFD91922.1| rpsC protein [Listeria monocytogenes FSL J2-071] gi|293582651|gb|EFF94683.1| ribosomal protein S3 [Listeria monocytogenes HPB2262] gi|293590870|gb|EFF99204.1| 30S ribosomal protein S3 [Listeria monocytogenes J2818] gi|293594254|gb|EFG02015.1| ribosomal protein S3 [Listeria monocytogenes FSL J1-194] gi|300515900|gb|EFK42949.1| ribosomal protein S3 [Listeria monocytogenes FSL N1-017] gi|307572215|emb|CAR85394.1| rpsC [Listeria monocytogenes L99] gi|313626687|gb|EFR95725.1| ribosomal protein S3 [Listeria ivanovii FSL F6-596] gi|313636116|gb|EFS01988.1| ribosomal protein S3 [Listeria seeligeri FSL S4-171] gi|328468111|gb|EGF39117.1| 30S ribosomal protein S3 [Listeria monocytogenes 1816] gi|328469799|gb|EGF40716.1| 30S ribosomal protein S3 [Listeria monocytogenes 220] Length = 218 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 94/219 (42%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + + + + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 218 >gi|302523999|ref|ZP_07276341.1| ribosomal protein S3 [Streptomyces sp. AA4] gi|302432894|gb|EFL04710.1| ribosomal protein S3 [Streptomyces sp. AA4] Length = 281 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLSTGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNPEADAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q S G++V GRL GAE+SR+E Y +GRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 A IDYG A+T +G G+KV++ + V Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGELVGG 210 >gi|93005320|ref|YP_579757.1| 30S ribosomal protein S3 [Psychrobacter cryohalolentis K5] gi|123264740|sp|Q1QDI0|RS3_PSYCK RecName: Full=30S ribosomal protein S3 gi|92392998|gb|ABE74273.1| SSU ribosomal protein S3P [Psychrobacter cryohalolentis K5] Length = 242 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 152/224 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L D+++REYL+ L A ++KI+IER Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYASPKQYSEYLINDIQVREYLRKKLDSAMISKIMIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I + +ARPG++IGKKG DIE+++K+L+ + +++ E+ P+++A L+A+ I Sbjct: 61 TGAAKITIATARPGIVIGKKGEDIERLQKELTKIMGVPAQVNIEEITSPDLDAHLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAKGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY + AET YG+ G+KV++ + + +S + Sbjct: 181 DIDYSSVRAETTYGTIGVKVWIFRGEILDGMNSVYNPVKEEQTR 224 >gi|303230141|ref|ZP_07316910.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a] gi|303231249|ref|ZP_07317987.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6] gi|302514156|gb|EFL56160.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6] gi|302515202|gb|EFL57175.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a] Length = 221 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAE-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++A L+A++I Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDAVLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 +IDYGTA A T YG GIKV++ + + ++ E Sbjct: 180 NIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218 >gi|226305347|ref|YP_002765305.1| 30S ribosomal protein S3 [Rhodococcus erythropolis PR4] gi|229489648|ref|ZP_04383511.1| ribosomal protein S3 [Rhodococcus erythropolis SK121] gi|259495255|sp|C0ZW31|RS3_RHOE4 RecName: Full=30S ribosomal protein S3 gi|226184462|dbj|BAH32566.1| 30S ribosomal protein S3 [Rhodococcus erythropolis PR4] gi|229323745|gb|EEN89503.1| ribosomal protein S3 [Rhodococcus erythropolis SK121] Length = 268 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 2/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAA 216 >gi|309812338|ref|ZP_07706093.1| ribosomal protein S3 [Dermacoccus sp. Ellin185] gi|308433643|gb|EFP57520.1| ribosomal protein S3 [Dermacoccus sp. Ellin185] Length = 275 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 104/234 (44%), Positives = 150/234 (64%), Gaps = 8/234 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ SRWFA G Y + ED+ IR+ L +++AG+A++ Sbjct: 1 MGQKINPNGFRLGITTEHKSRWFADSTKPGQRYSDYVKEDVAIRKLLSEGMERAGIARVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRSRLEKLTGKQVQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ + SA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLSARVSFRRAMRKGIMSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A T +G G+KV++ D E++ + P R D Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGDLTAKELAREQAAAPQRPARGRRND 234 >gi|84494780|ref|ZP_00993899.1| 30S ribosomal protein S3 [Janibacter sp. HTCC2649] gi|84384273|gb|EAQ00153.1| 30S ribosomal protein S3 [Janibacter sp. HTCC2649] Length = 272 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 101/228 (44%), Positives = 147/228 (64%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+ IR+ + +++AG++K+ Sbjct: 1 MGQKVNPHGFRLGITSEHRSRWFADSTKEGQRYRDYVKEDVAIRKLMSEGMERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPETDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAM++++QSA R GA G++V SGRL GAE+SRTE Y EGRVPL Sbjct: 121 AQGVAEQLSARVSFRRAMRKSMQSATRAGAKGIRVQVSGRLGGAEMSRTEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 TLRA ID G A T +G G+KV++ D + + A R Sbjct: 181 TLRAQIDVGFYEARTTFGRIGVKVWIYKGDVTARELAAQQATAPRQGR 228 >gi|226323016|ref|ZP_03798534.1| hypothetical protein COPCOM_00788 [Coprococcus comes ATCC 27758] gi|225208583|gb|EEG90937.1| hypothetical protein COPCOM_00788 [Coprococcus comes ATCC 27758] Length = 218 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 102/211 (48%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED KIR++L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADYLVEDHKIRKFLKNKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIVY+A+PG++IGK G++IEK++ +L MT+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELQKMTDKKVIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|149184317|ref|ZP_01862635.1| 30S ribosomal protein S3 [Erythrobacter sp. SD-21] gi|148831637|gb|EDL50070.1| 30S ribosomal protein S3 [Erythrobacter sp. SD-21] Length = 231 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL +N TW+SRW+A G +Y LL ED++IR+Y+ QA ++K++IER Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWYAEGRDYAKLLAEDIEIRKYILEKAAQAAISKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K CRI +Y+ARPG+IIGKKG DIEK+R KLS MT SE+ L++ E+ KPE++A L+AQ I Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRAKLSQMTESEVKLNIVEIRKPEVDAKLVAQGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMKRA+QSAMR GA+G+K++ GRL GAE++R E Y EGRVPL TLRA Sbjct: 121 ADQLIRRVAFRRAMKRAMQSAMRLGAEGIKIMCGGRLGGAEIARVEQYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +IDY A A TAYG GIKV+V + E+ D P A+ R++ + Sbjct: 181 NIDYAEAEALTAYGIIGIKVWVF-KGEILGHD---PTAQDRLMMES 222 >gi|305679831|ref|ZP_07402641.1| ribosomal protein S3 [Corynebacterium matruchotii ATCC 14266] gi|305660451|gb|EFM49948.1| ribosomal protein S3 [Corynebacterium matruchotii ATCC 14266] Length = 248 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S WFA EY L ED+KIR+YL +L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWFAD-KEYADYLAEDIKIRDYLTKNLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ARPG++IG++G++ +++R KL +T ++ L++ EV + NA L+AQSI Sbjct: 60 RDRVRIDIHTARPGIVIGRRGSEADRLRTKLEKLTRKQVALNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ +GRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVMCAGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226 A IDYGT A T +G G+KV++ D V + +S + A R D Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGNRRESELNAPTERRGRGD 227 >gi|68536917|ref|YP_251622.1| 30S ribosomal protein S3 [Corynebacterium jeikeium K411] gi|260579261|ref|ZP_05847145.1| 30S ribosomal protein S3 [Corynebacterium jeikeium ATCC 43734] gi|91207649|sp|Q4JT53|RS3_CORJK RecName: Full=30S ribosomal protein S3 gi|68264516|emb|CAI38004.1| 30S ribosomal protein S3 [Corynebacterium jeikeium K411] gi|258602613|gb|EEW15906.1| 30S ribosomal protein S3 [Corynebacterium jeikeium ATCC 43734] Length = 247 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 105/221 (47%), Positives = 150/221 (67%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSEGLDRAGIANVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYGT A T +G G+KV++ D V ++ A Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESLMNARD 220 >gi|156973057|ref|YP_001443964.1| 30S ribosomal protein S3 [Vibrio harveyi ATCC BAA-1116] gi|269959697|ref|ZP_06174077.1| 30S ribosomal protein S3 [Vibrio harveyi 1DA3] gi|171769917|sp|A7N0I3|RS3_VIBHB RecName: Full=30S ribosomal protein S3 gi|156524651|gb|ABU69737.1| hypothetical protein VIBHAR_00736 [Vibrio harveyi ATCC BAA-1116] gi|269835620|gb|EEZ89699.1| 30S ribosomal protein S3 [Vibrio harveyi 1DA3] Length = 232 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIK ++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223 >gi|146317737|ref|YP_001197449.1| 30S ribosomal protein S3 [Streptococcus suis 05ZYH33] gi|146319927|ref|YP_001199638.1| 30S ribosomal protein S3 [Streptococcus suis 98HAH33] gi|223933100|ref|ZP_03625093.1| ribosomal protein S3 [Streptococcus suis 89/1591] gi|253750993|ref|YP_003024134.1| 30S ribosomal protein S3 [Streptococcus suis SC84] gi|253752893|ref|YP_003026033.1| 30S ribosomal protein S3 [Streptococcus suis P1/7] gi|253754718|ref|YP_003027858.1| 30S ribosomal protein S3 [Streptococcus suis BM407] gi|302023168|ref|ZP_07248379.1| 30S ribosomal protein S3 [Streptococcus suis 05HAS68] gi|330831926|ref|YP_004400751.1| 30S ribosomal protein S3 [Streptococcus suis ST3] gi|152060909|sp|A4VYP9|RS3_STRS2 RecName: Full=30S ribosomal protein S3 gi|152060911|sp|A4VSG0|RS3_STRSY RecName: Full=30S ribosomal protein S3 gi|145688543|gb|ABP89049.1| ribosomal protein S3 [Streptococcus suis 05ZYH33] gi|145690733|gb|ABP91238.1| ribosomal protein S3 [Streptococcus suis 98HAH33] gi|223898287|gb|EEF64655.1| ribosomal protein S3 [Streptococcus suis 89/1591] gi|251815282|emb|CAZ50848.1| 30S ribosomal protein S3 [Streptococcus suis SC84] gi|251817182|emb|CAZ54904.1| 30S ribosomal protein S3 [Streptococcus suis BM407] gi|251819138|emb|CAR44234.1| 30S ribosomal protein S3 [Streptococcus suis P1/7] gi|292557537|gb|ADE30538.1| ribosomal protein S3 [Streptococcus suis GZ1] gi|319757247|gb|ADV69189.1| 30S ribosomal protein S3 [Streptococcus suis JS14] gi|329306149|gb|AEB80565.1| 30S ribosomal protein S3 [Streptococcus suis ST3] Length = 217 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR +++ L A + I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRNFIKKELADASTSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ +P+++A L+ +SI Sbjct: 60 VNKVIVSIHTAKPGMVIGKAGSNVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEALTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|154498889|ref|ZP_02037267.1| hypothetical protein BACCAP_02881 [Bacteroides capillosus ATCC 29799] gi|150271729|gb|EDM98955.1| hypothetical protein BACCAP_02881 [Bacteroides capillosus ATCC 29799] Length = 283 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 110/216 (50%), Positives = 147/216 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+AR + G LL ED KIR++L+ AG+ KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYARNEKVGDLLVEDKKIRDFLKKTQYGAGIPKIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI ++ ARPG++IGK G IE +R +L M + L++ EV P+++A LIA++I Sbjct: 61 NAKVRIYLHCARPGVVIGKGGEAIEALRLQLEKMLGKSVALNIVEVKNPDMDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMK A+ AMR GA G+K SGRL GAE++RTE Y +G +PLQTLRA Sbjct: 121 AQQLEKRIGFRRAMKNAMGRAMRMGARGIKTQVSGRLGGAEIARTEHYHDGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDYG A A T YG G+KV+V + +S + T P Sbjct: 181 DIDYGFAEAATTYGRIGVKVWVYKGEILSQALRTTP 216 >gi|288904279|ref|YP_003429500.1| ribosomal protein S3 [Streptococcus gallolyticus UCN34] gi|306830308|ref|ZP_07463479.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977258|ref|YP_004286974.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731004|emb|CBI12548.1| ribosomal protein S3 [Streptococcus gallolyticus UCN34] gi|304427555|gb|EFM30656.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177186|emb|CBZ47230.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 217 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 149/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|283796553|ref|ZP_06345706.1| ribosomal protein S3 [Clostridium sp. M62/1] gi|291075967|gb|EFE13331.1| ribosomal protein S3 [Clostridium sp. M62/1] gi|295092553|emb|CBK78660.1| SSU ribosomal protein S3P [Clostridium cf. saccharolyticum K10] Length = 218 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 98/209 (46%), Positives = 148/209 (70%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++ L ED KIR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-ADFADNLVEDHKIRTYLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IG+ G++IEK++ ++ +T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKVIIYTAKPGVVIGRGGSEIEKVKAEVQKLTDKKLFIDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK A+ +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSAMGRSMKAGVKGIKAAVAGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLP 208 >gi|55821899|ref|YP_140341.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMG 18311] gi|55823815|ref|YP_142256.1| 30S ribosomal protein S3 [Streptococcus thermophilus CNRZ1066] gi|81676492|sp|Q5LXR7|RS3_STRT1 RecName: Full=30S ribosomal protein S3 gi|81676645|sp|Q5M2B9|RS3_STRT2 RecName: Full=30S ribosomal protein S3 gi|55737884|gb|AAV61526.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMG 18311] gi|55739800|gb|AAV63441.1| 30S ribosomal protein S3 [Streptococcus thermophilus CNRZ1066] Length = 217 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I I R Sbjct: 1 MGQKVHPIGLRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIVRA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|229821617|ref|YP_002883143.1| ribosomal protein S3 [Beutenbergia cavernae DSM 12333] gi|259495237|sp|C5C0I5|RS3_BEUC1 RecName: Full=30S ribosomal protein S3 gi|229567530|gb|ACQ81381.1| ribosomal protein S3 [Beutenbergia cavernae DSM 12333] Length = 258 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 102/231 (44%), Positives = 151/231 (65%), Gaps = 4/231 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP+ FRLG+ SRWFA G Y + ED++IR+ + L++AG++K+ Sbjct: 1 MGQKVNPLGFRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRSELEKLTGKQVQLNILEVKNPELDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA GV+V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVAFRRAMRKGMQSAQRAGAKGVRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 TLRA+IDYG A T +G G+KV++ D + A+ + Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDMTEREFAREQASAAPRARGRA 231 >gi|299768672|ref|YP_003730698.1| 30S ribosomal protein S3 [Acinetobacter sp. DR1] gi|298698760|gb|ADI89325.1| 30S ribosomal protein S3 [Acinetobacter sp. DR1] Length = 250 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224 IDY T AET YG+ G+KV++ + + PA AE R + Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226 >gi|295394342|ref|ZP_06804567.1| 30S ribosomal protein S3 [Brevibacterium mcbrellneri ATCC 49030] gi|294972800|gb|EFG48650.1| 30S ribosomal protein S3 [Brevibacterium mcbrellneri ATCC 49030] Length = 264 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 104/225 (46%), Positives = 156/225 (69%), Gaps = 8/225 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ S+WF ++ Y + ED++IRE LQ +L++AG++++ Sbjct: 1 MGQKINPNGFRLGITTDHKSKWFTDSNKRGQRYADFVGEDVRIREMLQNNLERAGLSRVN 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T +I L++ EV PEI+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRGQLEKLTGKQIQLNILEVKNPEIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAM++A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLASRVAFRRAMRKAIQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPA 217 TLRA+IDYG A T +G G+KV++ D E++ ++ P+ Sbjct: 181 TLRANIDYGFYEAHTTFGRIGVKVWIYKGDLTDKELAAQEAAQPS 225 >gi|325981811|ref|YP_004294213.1| 30S ribosomal protein S3 [Nitrosomonas sp. AL212] gi|325531330|gb|ADZ26051.1| ribosomal protein S3 [Nitrosomonas sp. AL212] Length = 272 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 119/226 (52%), Positives = 162/226 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V+ W SRW+A S + ++L+ED+K+R +L LK A V KILIER Sbjct: 1 MGQKINPTGFRLSVHKNWLSRWYANSSNFASMLNEDIKVRNFLANRLKNASVGKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE +R +L +H+++ E+ KPEI+A LIA +I Sbjct: 61 SKNARITIFSSRPGVVIGKKGEDIEVLRSELQKRMGVPVHVNIEEIRKPEIDAQLIADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYGT+ A+T YG GIKV++ + + D + E + Sbjct: 181 DLDYGTSEAKTTYGIIGIKVWIFKGELLGKDDQVNHLITNTNSENE 226 >gi|317125866|ref|YP_004099978.1| 30S ribosomal protein S3P [Intrasporangium calvum DSM 43043] gi|315589954|gb|ADU49251.1| SSU ribosomal protein S3P [Intrasporangium calvum DSM 43043] Length = 277 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 149/228 (65%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA G Y + ED+ IR ++ +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTDHRSHWFADSTKVGQRYRDYVKEDVAIRRLMEKGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PEI++ L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEIDSQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRLNGAE+SRTE Y EGRVPL Sbjct: 121 AQGIAEQLSARVSFRRAMRKGMQSAQRAGAKGIRVQVSGRLNGAEMSRTEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 TLRA IDYG A T +G G+KV++ D + + AA R Sbjct: 181 TLRAQIDYGFYEARTTFGRIGVKVWIYKGDMTAKELAAQQAAAPRPSR 228 >gi|327438284|dbj|BAK14649.1| ribosomal protein S3 [Solibacillus silvestris StLB046] Length = 218 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W S+WFA +Y LLHED+K+R+Y++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGVIRDWESKWFAE-KDYANLLHEDIKVRKYIETKLKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGTEVENLRKHLTEVTGKRVHINIIEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+++Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQSIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A A+T YG G+KV++ + + +++ + Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKNSVEGGK 218 >gi|160914553|ref|ZP_02076768.1| hypothetical protein EUBDOL_00559 [Eubacterium dolichum DSM 3991] gi|158433711|gb|EDP12000.1| hypothetical protein EUBDOL_00559 [Eubacterium dolichum DSM 3991] Length = 266 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 143/224 (63%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A EY LL ED+KIRE++ LK A V+++ IER+ Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KEYADLLLEDVKIREFIFKELKAASVSRVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I++ +ARPG+IIG G IE ++KK+ +T I+L V E+ P+++A L+A+S Sbjct: 60 KNRVEIMIRTARPGVIIGTNGESIELLKKKIEKLTGGKNIYLKVLEIANPDLDAKLVARS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R FR A KRA+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR Sbjct: 120 IADQLEQRASFRTAQKRAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGNVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 A IDY A T YG G+KV++ + + T P A + Sbjct: 180 ADIDYAWEEAHTTYGRLGVKVWICRGEVLPGQMVTEPEAPKNPM 223 >gi|300933004|ref|ZP_07148260.1| 30S ribosomal protein S3 [Corynebacterium resistens DSM 45100] Length = 247 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 104/216 (48%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A IDYGT A T +G G+KV++ D V ++ Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESL 215 >gi|269219000|ref|ZP_06162854.1| ribosomal protein S3 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212111|gb|EEZ78451.1| ribosomal protein S3 [Actinomyces sp. oral taxon 848 str. F0332] Length = 265 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S+WFA ++ Y + ED++IR ++ L +AG++++ Sbjct: 1 MGQKVNPTGFRLGITTDHRSKWFADSNKPGQRYADFVREDIQIRRMIEKTLDRAGISRVN 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IER + + +++ARPG++IG++G + +++R L +T I L++ EV PE +A L+ Sbjct: 61 IERRAERVVVDIHTARPGIVIGRRGAEADRLRADLEKLTGKAIQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAERAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYRGDV 211 >gi|293375395|ref|ZP_06621676.1| ribosomal protein S3 [Turicibacter sanguinis PC909] gi|325844408|ref|ZP_08168135.1| ribosomal protein S3 [Turicibacter sp. HGF1] gi|292645948|gb|EFF63977.1| ribosomal protein S3 [Turicibacter sanguinis PC909] gi|325489082|gb|EGC91466.1| ribosomal protein S3 [Turicibacter sp. HGF1] Length = 219 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 145/219 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W++RW+A ++ LLHEDLKIR+++ K+A V+++ IER Sbjct: 1 MGQKVSPIGLRVGVIRDWDARWYANDKDFATLLHEDLKIRDFINNKFKKASVSRVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 IIV++A+PG++IG+ G++ + +L MT + + + E+ +PE++A L+A SI Sbjct: 61 KNRVNIIVHTAKPGMVIGRGGSEKDAAVAQLEKMTGKRVFIRIVEIKRPEVDAQLVANSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K A+Q A++FGA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 121 AEQLENRASFRRVQKVAIQRAIKFGAKGIKTQVSGRLGGADMARAEGYSEGNVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY TA A+T YG G+KV++ + + + + + Sbjct: 181 DIDYATAEADTTYGKLGVKVWIYKGEVLPTKNRQVKEGK 219 >gi|256827408|ref|YP_003151367.1| 30S ribosomal protein S3P [Cryptobacterium curtum DSM 15641] gi|256583551|gb|ACU94685.1| SSU ribosomal protein S3P [Cryptobacterium curtum DSM 15641] Length = 235 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 106/219 (48%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FR+GV W SRW+A +Y L DL IR +L +L +A V+K+ IER Sbjct: 1 MGQKVSPTGFRIGVIENWRSRWYAD-KDYAKTLENDLAIRRFLDGYLTRAAVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++++ +ARPG++IGKKG +I+ +RKKLS + + I + V E+ +PE++A LIAQS+ Sbjct: 60 GDKIKVVITTARPGVVIGKKGAEIDTLRKKLSQVADGPISVEVIEIKRPELDANLIAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++AVQSA + GA G+++ +GRL GAE+SR E Y EGRVPL TLRA Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAQGIRIQCAGRLGGAEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A T G+ G++V+V + + PA E Sbjct: 180 KIDYGFTTANTQMGAIGVQVWVYHGEVLPGQKLPEPALE 218 >gi|169830024|ref|YP_001700182.1| 30S ribosomal protein S3 [Lysinibacillus sphaericus C3-41] gi|226697728|sp|B1HMX4|RS3_LYSSC RecName: Full=30S ribosomal protein S3 gi|168994512|gb|ACA42052.1| 30S ribosomal protein S3 [Lysinibacillus sphaericus C3-41] Length = 217 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 147/213 (69%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG +IGK GT++E +RK LS +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGKVIGKGGTEVENLRKYLSELTGKRVHINIIEIKRADLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +R GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRTIRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDY A A+T YG G+KV++ + + S Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKS 212 >gi|11465774|ref|NP_053918.1| ribosomal protein S3 [Porphyra purpurea] gi|1710704|sp|P51308|RR3_PORPU RecName: Full=30S ribosomal protein S3, chloroplastic gi|1276774|gb|AAC08194.1| 30S ribosomal protein S3 [Porphyra purpurea] Length = 230 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 102/228 (44%), Positives = 141/228 (61%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FR+G+ S WFA +Y LL ED KIR ++ L A +AKI I R Sbjct: 1 MGQKIHPLGFRIGITQKHRSSWFASSKDYSVLLQEDHKIRSFIHGKLSNASIAKIEINRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 +++ +ARPG+++GK G IE +R L+ + N +I ++V E+ P+ ATL+A+ Sbjct: 61 ADQVEVLIATARPGIVLGKSGAGIESLRNSLTLILDPNKQIRVNVVEISDPDSEATLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLE+RV FRRA+++AVQ A R GVK+ SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA IDY A T YG G+KV++ + + DS A + D Sbjct: 181 RADIDYCHRQAHTTYGVLGVKVWLFKGELLPDSKVVELAPSQDQINPD 228 >gi|297623280|ref|YP_003704714.1| 30S ribosomal protein S3 [Truepera radiovictrix DSM 17093] gi|297164460|gb|ADI14171.1| ribosomal protein S3 [Truepera radiovictrix DSM 17093] Length = 264 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 106/226 (46%), Positives = 145/226 (64%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP+ FRLGVN +++W+A Y LL ED IR + + +GV++I IER Sbjct: 1 MGNKINPVGFRLGVNKEPSAKWYANTKTYAKLLAEDDLIRRTVTADVGHSGVSRIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + +++A+PG++IG+ G I+++R+KL ++ + ++V EV P NA LIAQ I Sbjct: 61 AHNVNVTIHTAKPGVVIGRGGESIKQLRQKLDHLIGGTVAVNVQEVANPNTNAALIAQRI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR FRRAMK+A+Q M GA GVK+ SGRL GAE +R E Y++GRVPLQTLRA Sbjct: 121 AEQLERRFAFRRAMKQAIQRTMESGAKGVKIRCSGRLGGAEQARPESYMDGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGTA A T YG G+KV+V + V D ++D Sbjct: 181 DIDYGTARANTTYGVIGVKVWVFHGELVGDKQRRAANLPRPRQDED 226 >gi|237749521|ref|ZP_04580001.1| small subunit ribosomal protein S3 [Oxalobacter formigenes OXCC13] gi|229380883|gb|EEO30974.1| small subunit ribosomal protein S3 [Oxalobacter formigenes OXCC13] Length = 282 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 116/225 (51%), Positives = 160/225 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+SRW+A + + +L+EDLK R YL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVARNWSSRWYAGNTNFAGMLNEDLKARAYLKKKLKNASVGQVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R +YS+RPG++IGKKG DIE ++ LS + +H+++ EV KPEI+A LIA SI Sbjct: 61 AKNARFTIYSSRPGVVIGKKGEDIEVLKSDLSKIMGVPVHVNIEEVRKPEIHAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAM+RA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMRRAMQNAMRLGAVGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG + A+T YG G+KV+V D + + ++ A +K Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDRLENGEAPKIEAPAEEDKK 225 >gi|30018386|ref|NP_830017.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 14579] gi|30260307|ref|NP_842684.1| 30S ribosomal protein S3 [Bacillus anthracis str. Ames] gi|42779197|ref|NP_976444.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10987] gi|47525372|ref|YP_016721.1| 30S ribosomal protein S3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183150|ref|YP_026402.1| 30S ribosomal protein S3 [Bacillus anthracis str. Sterne] gi|49481663|ref|YP_034468.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145104|ref|YP_081727.1| 30S ribosomal protein S3 [Bacillus cereus E33L] gi|65317568|ref|ZP_00390527.1| COG0092: Ribosomal protein S3 [Bacillus anthracis str. A2012] gi|118475885|ref|YP_893036.1| 30S ribosomal protein S3 [Bacillus thuringiensis str. Al Hakam] gi|206972217|ref|ZP_03233164.1| 30S ribosomal protein S3 [Bacillus cereus AH1134] gi|217957691|ref|YP_002336235.1| 30S ribosomal protein S3 [Bacillus cereus AH187] gi|218232828|ref|YP_002364965.1| 30S ribosomal protein S3 [Bacillus cereus B4264] gi|218895251|ref|YP_002443662.1| ribosomal protein S3 [Bacillus cereus G9842] gi|218901320|ref|YP_002449154.1| ribosomal protein S3 [Bacillus cereus AH820] gi|222093886|ref|YP_002527936.1| 30S ribosomal protein s3 [Bacillus cereus Q1] gi|225862168|ref|YP_002747546.1| 30S ribosomal protein S3 [Bacillus cereus 03BB102] gi|227812789|ref|YP_002812798.1| 30S ribosomal protein S3 [Bacillus anthracis str. CDC 684] gi|228898869|ref|ZP_04063151.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 4222] gi|228905913|ref|ZP_04069810.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 200] gi|228912855|ref|ZP_04076502.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919066|ref|ZP_04082445.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228925369|ref|ZP_04088465.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931618|ref|ZP_04094524.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228937419|ref|ZP_04100065.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228943922|ref|ZP_04106307.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950664|ref|ZP_04112798.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956557|ref|ZP_04118353.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228963216|ref|ZP_04124385.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228970305|ref|ZP_04130964.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976875|ref|ZP_04137287.1| 30S ribosomal protein S3 [Bacillus thuringiensis Bt407] gi|228983371|ref|ZP_04143584.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229041021|ref|ZP_04189784.1| 30S ribosomal protein S3 [Bacillus cereus AH676] gi|229067881|ref|ZP_04201198.1| 30S ribosomal protein S3 [Bacillus cereus F65185] gi|229077416|ref|ZP_04210068.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-2] gi|229089247|ref|ZP_04220528.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-42] gi|229107802|ref|ZP_04237438.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-15] gi|229119778|ref|ZP_04249039.1| 30S ribosomal protein S3 [Bacillus cereus 95/8201] gi|229125633|ref|ZP_04254665.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-Cer4] gi|229136962|ref|ZP_04265589.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST26] gi|229142922|ref|ZP_04271363.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST24] gi|229148525|ref|ZP_04276781.1| 30S ribosomal protein S3 [Bacillus cereus m1550] gi|229153894|ref|ZP_04282024.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 4342] gi|229159289|ref|ZP_04287313.1| 30S ribosomal protein S3 [Bacillus cereus R309803] gi|229176716|ref|ZP_04304120.1| 30S ribosomal protein S3 [Bacillus cereus 172560W] gi|229182510|ref|ZP_04309761.1| 30S ribosomal protein S3 [Bacillus cereus BGSC 6E1] gi|229188401|ref|ZP_04315449.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10876] gi|229194506|ref|ZP_04321309.1| 30S ribosomal protein S3 [Bacillus cereus m1293] gi|229604556|ref|YP_002864767.1| 30S ribosomal protein S3 [Bacillus anthracis str. A0248] gi|296500949|ref|YP_003662649.1| 30S ribosomal protein S3 [Bacillus thuringiensis BMB171] gi|300119571|ref|ZP_07057115.1| 30S ribosomal protein S3 [Bacillus cereus SJ1] gi|301051853|ref|YP_003790064.1| 30S ribosomal protein S3 [Bacillus anthracis CI] gi|34098359|sp|Q81J36|RS3_BACCR RecName: Full=30S ribosomal protein S3 gi|34098360|sp|Q81VS4|RS3_BACAN RecName: Full=30S ribosomal protein S3 gi|61215459|sp|Q63H84|RS3_BACCZ RecName: Full=30S ribosomal protein S3 gi|61215553|sp|Q6HPQ2|RS3_BACHK RecName: Full=30S ribosomal protein S3 gi|61215627|sp|Q73F90|RS3_BACC1 RecName: Full=30S ribosomal protein S3 gi|152060846|sp|A0R8I6|RS3_BACAH RecName: Full=30S ribosomal protein S3 gi|29893926|gb|AAP07218.1| SSU ribosomal protein S3P [Bacillus cereus ATCC 14579] gi|30253628|gb|AAP24170.1| 30S ribosomal protein S3 [Bacillus anthracis str. Ames] gi|42735112|gb|AAS39052.1| ribosomal protein S3 [Bacillus cereus ATCC 10987] gi|47500520|gb|AAT29196.1| ribosomal protein S3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49177077|gb|AAT52453.1| ribosomal protein S3 [Bacillus anthracis str. Sterne] gi|49333219|gb|AAT63865.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978573|gb|AAU20123.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus cereus E33L] gi|118415110|gb|ABK83529.1| SSU ribosomal protein S3P [Bacillus thuringiensis str. Al Hakam] gi|206732791|gb|EDZ49966.1| 30S ribosomal protein S3 [Bacillus cereus AH1134] gi|217065283|gb|ACJ79533.1| ribosomal protein S3 [Bacillus cereus AH187] gi|218160785|gb|ACK60777.1| ribosomal protein S3 [Bacillus cereus B4264] gi|218538933|gb|ACK91331.1| ribosomal protein S3 [Bacillus cereus AH820] gi|218541179|gb|ACK93573.1| ribosomal protein S3 [Bacillus cereus G9842] gi|221237934|gb|ACM10644.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus cereus Q1] gi|225789320|gb|ACO29537.1| 30S ribosomal protein S3 [Bacillus cereus 03BB102] gi|227002828|gb|ACP12571.1| 30S ribosomal protein S3 [Bacillus anthracis str. CDC 684] gi|228588972|gb|EEK46987.1| 30S ribosomal protein S3 [Bacillus cereus m1293] gi|228595075|gb|EEK52846.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10876] gi|228600965|gb|EEK58534.1| 30S ribosomal protein S3 [Bacillus cereus BGSC 6E1] gi|228606759|gb|EEK64176.1| 30S ribosomal protein S3 [Bacillus cereus 172560W] gi|228624181|gb|EEK80983.1| 30S ribosomal protein S3 [Bacillus cereus R309803] gi|228629575|gb|EEK86272.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 4342] gi|228634941|gb|EEK91514.1| 30S ribosomal protein S3 [Bacillus cereus m1550] gi|228640543|gb|EEK96932.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST24] gi|228646500|gb|EEL02707.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST26] gi|228657825|gb|EEL13631.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-Cer4] gi|228663679|gb|EEL19258.1| 30S ribosomal protein S3 [Bacillus cereus 95/8201] gi|228675651|gb|EEL30859.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-15] gi|228694086|gb|EEL47768.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-42] gi|228705892|gb|EEL58226.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-2] gi|228715240|gb|EEL67099.1| 30S ribosomal protein S3 [Bacillus cereus F65185] gi|228727318|gb|EEL78512.1| 30S ribosomal protein S3 [Bacillus cereus AH676] gi|228776361|gb|EEM24714.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228782845|gb|EEM31011.1| 30S ribosomal protein S3 [Bacillus thuringiensis Bt407] gi|228789414|gb|EEM37334.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796474|gb|EEM43913.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228803122|gb|EEM49944.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809015|gb|EEM55500.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815755|gb|EEM61991.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822252|gb|EEM68234.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228828046|gb|EEM73774.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834291|gb|EEM79832.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228840591|gb|EEM85853.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846791|gb|EEM91796.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228853728|gb|EEM98488.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 200] gi|228860769|gb|EEN05147.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 4222] gi|229268964|gb|ACQ50601.1| 30S ribosomal protein S3 [Bacillus anthracis str. A0248] gi|296322001|gb|ADH04929.1| 30S ribosomal protein S3 [Bacillus thuringiensis BMB171] gi|298723043|gb|EFI63941.1| 30S ribosomal protein S3 [Bacillus cereus SJ1] gi|300374022|gb|ADK02926.1| 30S ribosomal protein S3 [Bacillus cereus biovar anthracis str. CI] gi|324324107|gb|ADY19367.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar finitimus YBT-020] gi|326937911|gb|AEA13807.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar chinensis CT-43] Length = 219 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A+T YG G+KV++ + + Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219 >gi|71083798|ref|YP_266518.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062] gi|91207827|sp|Q4FLM4|RS3_PELUB RecName: Full=30S ribosomal protein S3 gi|71062911|gb|AAZ21914.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062] Length = 226 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIR Y++ ++ +GV+K++IERT Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIRAYIKKNVVNSGVSKVMIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 C + +Y++RPG +IGKKG+DI+KI+ LS TN+E+ L++ EV KPE NA L+A++I Sbjct: 61 SNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTNNEVTLNIKEVKKPETNAYLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE EG +P TLRA Sbjct: 121 AQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGGNEIARTEWLREGSIPSHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVE 224 IDY A A T +G GIK+++ + + T V E Sbjct: 181 DIDYAEAEALTTFGIIGIKIWIYKGEVFAKEFSQETNKIVPKEVKE 226 >gi|171778382|ref|ZP_02919561.1| hypothetical protein STRINF_00412 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282913|gb|EDT48337.1| hypothetical protein STRINF_00412 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 217 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|71282222|ref|YP_267616.1| 30S ribosomal protein S3 [Colwellia psychrerythraea 34H] gi|91207648|sp|Q487Z9|RS3_COLP3 RecName: Full=30S ribosomal protein S3 gi|71147962|gb|AAZ28435.1| ribosomal protein S3 [Colwellia psychrerythraea 34H] Length = 231 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 110/224 (49%), Positives = 155/224 (69%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ + S WFA ++ + L D K+RE+L+ LK+A ++K++IER Sbjct: 1 MGQKVNPTGIRLGITKPFASTWFASNKDFASNLDGDHKVREFLKEKLKRASLSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRLAVSKIAGVPAQINIAEVRKPEMDAQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GA+++R E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGADIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV--SDSDSTIPAAEHRV 222 IDY A T YG GIKV++ + + + +PAA+ + Sbjct: 181 DIDYAIARGNTTYGVIGIKVWIFKGEIIGNMPLQAEVPAAKPKR 224 >gi|94987408|ref|YP_595341.1| 30S ribosomal protein S3 [Lawsonia intracellularis PHE/MN1-00] gi|123262113|sp|Q1MPQ7|RS3_LAWIP RecName: Full=30S ribosomal protein S3 gi|94731657|emb|CAJ55020.1| ribosomal protein S3 [Lawsonia intracellularis PHE/MN1-00] Length = 213 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 146/208 (70%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y ++ED KIR Y++ L AG++K+ IER Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKDYANFIYEDYKIRSYIKKLLYSAGISKMEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +++ +ARPG++IG+KG +IEK+R +L E L V EV +PE++A L+A++I Sbjct: 60 GGKICLMLSTARPGIVIGRKGVEIEKLRLELRKNFGQEFSLEVTEVRRPEVDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V A +FGA+G+K+ SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AMQLERRVAFRRAMKRTVSMARKFGAEGIKITCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWIYKGEVL 207 >gi|85858152|ref|YP_460354.1| 30S ribosomal protein S3 [Syntrophus aciditrophicus SB] gi|123752424|sp|Q2LQ95|RS3_SYNAS RecName: Full=30S ribosomal protein S3 gi|85721243|gb|ABC76186.1| SSU ribosomal protein S3P [Syntrophus aciditrophicus SB] Length = 216 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 118/216 (54%), Positives = 157/216 (72%), Gaps = 1/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N WNSRW+A Y ++L+EDLKIR YL+ L AG++ I IER Sbjct: 1 MGQKVNPIGLRLGINKNWNSRWYAD-KSYRSMLYEDLKIRGYLKKKLYHAGISHIDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+ARPG+IIGKKG +IEK++K+L N+++SEI +++ EV KPEI+A L+A++I Sbjct: 60 VNKAKVNIYAARPGIIIGKKGAEIEKLKKELENVSSSEIIINILEVRKPEIDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ V +A++FGA G++V SGRL GAE+SRTE Y EGRVPL TLRA Sbjct: 120 ATQLERRVAFRRAMKKCVLTALKFGAKGIRVSCSGRLGGAEMSRTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 ID G A+TAYG GIKV + + + Sbjct: 180 DIDSGFTEAKTAYGQIGIKVLIFHGEVLPGRKELEK 215 >gi|111023102|ref|YP_706074.1| 30S ribosomal protein S3 [Rhodococcus jostii RHA1] gi|226365601|ref|YP_002783384.1| 30S ribosomal protein S3 [Rhodococcus opacus B4] gi|122955192|sp|Q0S3H0|RS3_RHOSR RecName: Full=30S ribosomal protein S3 gi|254764542|sp|C1B018|RS3_RHOOB RecName: Full=30S ribosomal protein S3 gi|110822632|gb|ABG97916.1| 30S ribosomal protein S3 [Rhodococcus jostii RHA1] gi|226244091|dbj|BAH54439.1| 30S ribosomal protein S3 [Rhodococcus opacus B4] Length = 268 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 2/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAA 216 >gi|329118604|ref|ZP_08247308.1| 30S ribosomal protein S3 [Neisseria bacilliformis ATCC BAA-1200] gi|327465339|gb|EGF11620.1| 30S ribosomal protein S3 [Neisseria bacilliformis ATCC BAA-1200] Length = 231 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 113/227 (49%), Positives = 163/227 (71%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL VN W+S+WFA+ ++ +L +D+ +REYL+ L A V ++LIER Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFAKTGDFSNVLKQDIDVREYLRKRLANASVGRVLIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +YSARPG++IG+KG DIE +++ L N+ +H+++ E+ KPE++A +IA I Sbjct: 61 AKSARITIYSARPGIVIGRKGEDIEVLKQDLQNLLGVPVHVNIEEIRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA GVK++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRVGAKGVKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DY T+ A T YG G+KV+V + ++S +E + + Sbjct: 181 NVDYATSEAHTTYGVIGLKVWVYTGE---GNESIQSKSEQENKRRKA 224 >gi|148544690|ref|YP_001272060.1| 30S ribosomal protein S3 [Lactobacillus reuteri DSM 20016] gi|184154043|ref|YP_001842384.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112] gi|194466947|ref|ZP_03072934.1| ribosomal protein S3 [Lactobacillus reuteri 100-23] gi|227363813|ref|ZP_03847920.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3] gi|227543617|ref|ZP_03973666.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A] gi|300909354|ref|ZP_07126815.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112] gi|325683024|ref|ZP_08162540.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A] gi|172048239|sp|A5VLJ9|RS3_LACRD RecName: Full=30S ribosomal protein S3 gi|148531724|gb|ABQ83723.1| SSU ribosomal protein S3P [Lactobacillus reuteri DSM 20016] gi|183225387|dbj|BAG25904.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112] gi|194453983|gb|EDX42880.1| ribosomal protein S3 [Lactobacillus reuteri 100-23] gi|227071170|gb|EEI09486.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3] gi|227186457|gb|EEI66528.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A] gi|300893219|gb|EFK86578.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112] gi|324977374|gb|EGC14325.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A] Length = 221 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 93/219 (42%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFADYLNEDLRIRKYIEKRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRIESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG G+K ++ + + ++ + Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNSNNDEQ 218 >gi|320548049|ref|ZP_08042329.1| 30S ribosomal protein S3 [Streptococcus equinus ATCC 9812] gi|320447291|gb|EFW88054.1| 30S ribosomal protein S3 [Streptococcus equinus ATCC 9812] Length = 217 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 149/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRVKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|326803039|ref|YP_004320857.1| ribosomal protein S3 [Aerococcus urinae ACS-120-V-Col10a] gi|326650398|gb|AEA00581.1| ribosomal protein S3 [Aerococcus urinae ACS-120-V-Col10a] Length = 216 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+GV W++RWF +Y LHEDL +R+Y++ LK A ++++ IER Sbjct: 1 MGQKINPTGLRIGVIKDWDARWF-EEKDYANTLHEDLAVRDYIEDALKDASISQVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I V++A+PG++IGK G+++EK+RK L+ +T +H++V EV +P+++A L+ ++I Sbjct: 60 ANKVNINVHTAKPGMVIGKGGSEVEKLRKDLNQLTGKRVHINVIEVKQPDLSAELVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK+A+Q M+ GA G+KV SGRLNGA+++RTE EG VPL TLRA Sbjct: 120 AQQLENRIAFRRAMKQAIQRTMKAGAQGIKVQVSGRLNGADMARTEALDEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDY A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAWVEADTTYGKIGVKVWICRGEVLPTTNNQEEE 216 >gi|302669967|ref|YP_003829927.1| ribosomal protein S3 RpsC [Butyrivibrio proteoclasticus B316] gi|302394440|gb|ADL33345.1| ribosomal protein S3 RpsC [Butyrivibrio proteoclasticus B316] Length = 223 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 146/219 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIADWDSKWYAESADFANNLVEDYNIRKFLKKKLYAAGVSKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IVY+A+PG++IGK G +IE +K+LS +T+ ++ + + E+ KP+ +A L+A++I Sbjct: 61 SDRVKVIVYTAKPGVVIGKGGAEIEVTKKELSKLTDKKVLVDIKEIKKPDKDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + M+ A G+K SGRL GA+++R+E Y EG +PLQTLRA Sbjct: 121 AQQLENRVSFRRAMKSCMSRTMKTDALGIKACCSGRLGGADIARSEFYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A+T YG G+KV++ + + E Sbjct: 181 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKAGENSDKE 219 >gi|46199624|ref|YP_005291.1| 30S ribosomal protein S3 [Thermus thermophilus HB27] gi|55981655|ref|YP_144952.1| 30S ribosomal protein S3 [Thermus thermophilus HB8] gi|24212666|sp|P80372|RS3_THET8 RecName: Full=30S ribosomal protein S3 gi|50401227|sp|P62663|RS3_THET2 RecName: Full=30S ribosomal protein S3 gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|13399794|pdb|1HNW|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399816|pdb|1HNX|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399838|pdb|1HNZ|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278012|pdb|1GIX|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|14278058|pdb|1IBK|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278079|pdb|1IBL|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278103|pdb|1IBM|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|15826122|pdb|1JGO|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826147|pdb|1JGP|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826172|pdb|1JGQ|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|20663888|pdb|1J5E|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|27065878|pdb|1N32|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065905|pdb|1N33|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065932|pdb|1N34|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065958|pdb|1N36|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|28373701|pdb|1ML5|F Chain F, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|58177402|pdb|1XMO|C Chain C, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177425|pdb|1XMQ|C Chain C, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177466|pdb|1XNQ|C Chain C, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177489|pdb|1XNR|C Chain C, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361056|pdb|1YL4|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192238|pdb|2B64|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192301|pdb|2B9M|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192357|pdb|2B9O|C Chain C, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|110591325|pdb|2F4V|C Chain C, 30s Ribosome + Designer Antibiotic gi|116667656|pdb|2HHH|C Chain C, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668199|pdb|2J00|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668260|pdb|2J02|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389714|pdb|2HGI|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389771|pdb|2HGP|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389827|pdb|2HGR|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242710|pdb|2OW8|DD Chain d, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243620|pdb|2UU9|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243647|pdb|2UUA|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243674|pdb|2UUB|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243701|pdb|2UUC|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243840|pdb|2UXC|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836410|pdb|2UXB|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836487|pdb|2V46|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836543|pdb|2V48|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430902|pdb|2UXD|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285941|pdb|2QNH|DD Chain d, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|186972851|pdb|2VQE|C Chain C, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972874|pdb|2VQF|C Chain C, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|209156498|pdb|3D5A|C Chain C, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156554|pdb|3D5C|C Chain C, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938821|pdb|2JL5|C Chain C, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938879|pdb|2JL7|C Chain C, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766775|pdb|3F1E|C Chain C, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766831|pdb|3F1G|C Chain C, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887376|pdb|2WDG|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887401|pdb|2WDH|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887490|pdb|2WDK|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887547|pdb|2WDM|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823531|pdb|2WH1|C Chain C, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823590|pdb|2WH3|C Chain C, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099988|pdb|3HUW|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100044|pdb|3HUY|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824486|pdb|2WRI|C Chain C, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824548|pdb|2WRK|C Chain C, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824610|pdb|2WRN|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824669|pdb|2WRQ|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307169|pdb|3KIQ|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307227|pdb|3KIS|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307285|pdb|3KIU|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307343|pdb|3KIX|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965606|pdb|3KNH|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526684|pdb|3KNJ|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526709|pdb|3KNL|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526734|pdb|3KNN|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979506|pdb|3I8G|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979531|pdb|3I8H|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979590|pdb|3I9B|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979644|pdb|3I9D|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982077|pdb|2X9R|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982136|pdb|2X9T|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567964|pdb|2XFZ|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568022|pdb|2XG1|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776614|pdb|3OTO|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320237|pdb|3OGE|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320258|pdb|3OGY|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320339|pdb|3OHC|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320360|pdb|3OHD|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320441|pdb|3OHY|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320492|pdb|3OI0|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320543|pdb|3OI2|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320594|pdb|3OI4|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207675|pdb|2XQD|C Chain C, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754001|pdb|2XSY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754116|pdb|2XUY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533404|pdb|2Y0U|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533463|pdb|2Y0W|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533522|pdb|2Y0Y|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533581|pdb|2Y10|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533640|pdb|2Y12|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533699|pdb|2Y14|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533758|pdb|2Y16|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533817|pdb|2Y18|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|13446666|emb|CAC35062.1| ribosomal protein S3 [Thermus thermophilus HB27] gi|46197250|gb|AAS81664.1| SSU ribosomal protein S3P [Thermus thermophilus HB27] gi|55773068|dbj|BAD71509.1| 30S ribosomal protein S3 [Thermus thermophilus HB8] Length = 239 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 140/215 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ + Sbjct: 61 ADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +IDYG A+A T YG G+K Y+ L + + Sbjct: 181 NIDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKA 215 >gi|188584842|ref|YP_001916387.1| SSU ribosomal protein S3P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226697735|sp|B2A4E5|RS3_NATTJ RecName: Full=30S ribosomal protein S3 gi|179349529|gb|ACB83799.1| SSU ribosomal protein S3P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 229 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 110/212 (51%), Positives = 149/212 (70%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W S W+A Y L+HED+KIREY++ L A V+ I I+R Sbjct: 1 MGQKINPIGLRIGVIKDWQSNWYAD-KNYTELVHEDIKIREYIENKLFNADVSAIQIDRA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IGK G+ +EK+R + N+T ++H++V EV PE++A L A+SI Sbjct: 60 ANRIKVTLHTAKPGMVIGKGGSGVEKLRSDIENLTGKKVHINVMEVKTPELDAHLAAKSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+AV AMR GA G+KV+ SGRL GAE+SRTE Y EG VPLQTLRA Sbjct: 120 AIALERRVAFRRAMKQAVGRAMRQGAKGIKVMCSGRLGGAEMSRTEWYTEGNVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A TAYG G+K +++ + + + D Sbjct: 180 DIDYGMVEANTAYGQIGVKCWINKGEVLPEVD 211 >gi|304413151|ref|ZP_07394624.1| 30S ribosomal subunit protein S3 [Candidatus Regiella insecticola LSR1] gi|304283994|gb|EFL92387.1| 30S ribosomal subunit protein S3 [Candidatus Regiella insecticola LSR1] Length = 246 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 106/210 (50%), Positives = 150/210 (71%), Gaps = 1/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP FRLG+ W+S W+A E+ L D KIR+ L L +A V++I+IER Sbjct: 1 MGQKVNPNGFRLGIVKDWDSTWYAVNDKEFADNLAGDKKIRQVLMEKLDKASVSRIVIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 K+ R+ +++ARPG++IGKKG D+EK+RKK++++ +++ E+ KP++ A L+A S Sbjct: 61 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKKVTDIAAVPSQINIKEIRKPDLEAKLVADS 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A QLERRV+FRRAMKRAVQ+AMR GA G+++ SGRL GAE++RTE Y EGRVPL TLR Sbjct: 121 VASQLERRVMFRRAMKRAVQNAMRAGAKGIRINVSGRLGGAEIARTEWYREGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 A IDY + A T YG G+KV++ + + Sbjct: 181 ADIDYSLSEAHTTYGVIGVKVWIFKGEILG 210 >gi|227497187|ref|ZP_03927435.1| possible ribosomal protein S3 [Actinomyces urogenitalis DSM 15434] gi|226833318|gb|EEH65701.1| possible ribosomal protein S3 [Actinomyces urogenitalis DSM 15434] Length = 269 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA+IDYG A+T +G G+KV++ D +++ + AE Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGD-MTEREFARQQAE 222 >gi|166031653|ref|ZP_02234482.1| hypothetical protein DORFOR_01353 [Dorea formicigenerans ATCC 27755] gi|166028630|gb|EDR47387.1| hypothetical protein DORFOR_01353 [Dorea formicigenerans ATCC 27755] Length = 217 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED +IR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADYLVEDHEIRTYLKKRLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKITIYTAKPGVVIGKGGAEIEKVKGELAQFTDKKLVVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG G+KV++ + + + Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPER 210 >gi|262377306|ref|ZP_06070530.1| ribosomal protein S3 [Acinetobacter lwoffii SH145] gi|262307759|gb|EEY88898.1| ribosomal protein S3 [Acinetobacter lwoffii SH145] Length = 250 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 111/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLIKKLKNAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226 IDY T AET YG+ G+KV++ + + PA AE R ++ Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228 >gi|187734808|ref|YP_001876920.1| ribosomal protein S3 [Akkermansia muciniphila ATCC BAA-835] gi|226697659|sp|B2UMT3|RS3_AKKM8 RecName: Full=30S ribosomal protein S3 gi|187424860|gb|ACD04139.1| ribosomal protein S3 [Akkermansia muciniphila ATCC BAA-835] Length = 229 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRL VN W S+W+A G +Y LHEDL +R+Y++ L A V+ I+IER Sbjct: 1 MGQKVNPIGFRLAVNKDWRSKWYATGQDYATKLHEDLVMRKYIKEQLMSAAVSSIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 + RI V++ARPGL+IG+KG +IEKIR+ L + +++++ + E+ PE +A LIA+ Sbjct: 61 WNSVRITVHTARPGLVIGRKGEEIEKIRQYLQGLCGASTQVNIDIVEIRSPETDAQLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A QLERRV FRRAMKRAVQ AM GADG+++ +GRL GA+++R E Y EG+VPLQTL Sbjct: 121 NVAVQLERRVSFRRAMKRAVQVAMERGADGIRIRCAGRLGGADIARAEWYREGKVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 R IDYG A A T YG G+K +V+ RDEV ++ P+ Sbjct: 181 RTPIDYGFAEARTLYGIIGVKCWVNKRDEVVSQQNSRPSGPR 222 >gi|220928213|ref|YP_002505122.1| ribosomal protein S3 [Clostridium cellulolyticum H10] gi|219998541|gb|ACL75142.1| ribosomal protein S3 [Clostridium cellulolyticum H10] Length = 222 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 146/218 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A + + L ED+KIR +++ L +G+++I I+R Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKSFSSYLVEDVKIRNFIKKKLYISGISRIEIDRA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V +A+PGL+IGK G IE++RK++ MT + +++ E+ PE++A L+A++I Sbjct: 61 ANKVKINVNTAKPGLVIGKGGQGIEELRKEIEKMTGKSVLINITEIKVPEMDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+A+ M+ GA G+K SGRL GAE++RTE Y +G +PLQTLRA Sbjct: 121 ASQLEKRISFRRAMKQAMSRTMKLGAKGIKTACSGRLGGAEIARTEHYHDGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A+T YG G+KV++ + + A Sbjct: 181 DIDYGFAEADTTYGKIGVKVWIYKGEVLPAVKRDRKAE 218 >gi|323357366|ref|YP_004223762.1| ribosomal protein S3 [Microbacterium testaceum StLB037] gi|323273737|dbj|BAJ73882.1| ribosomal protein S3 [Microbacterium testaceum StLB037] Length = 252 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 106/226 (46%), Positives = 147/226 (65%), Gaps = 8/226 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y L ED+KIR L L +AGV+ I Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKAGQRYADYLAEDIKIRRLLTTSLDRAGVSNIE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E+IR L +T +I L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRADLEKLTGKQIQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAM++ +Q A R GA GV++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLTARVAFRRAMRKGLQGAQRAGAKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAA 218 TLRA+IDYG A+T +G G+KV++ D E++ + P + Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDLTNKELAREQANAPKS 226 >gi|28897037|ref|NP_796642.1| 30S ribosomal protein S3 [Vibrio parahaemolyticus RIMD 2210633] gi|260363909|ref|ZP_05776655.1| ribosomal protein S3 [Vibrio parahaemolyticus K5030] gi|260877955|ref|ZP_05890310.1| ribosomal protein S3 [Vibrio parahaemolyticus AN-5034] gi|260896467|ref|ZP_05904963.1| ribosomal protein S3 [Vibrio parahaemolyticus Peru-466] gi|262392510|ref|YP_003284364.1| 30S ribosomal protein S3p [Vibrio sp. Ex25] gi|269964728|ref|ZP_06178966.1| 30S ribosomal protein S3 [Vibrio alginolyticus 40B] gi|31340380|sp|Q87T07|RS3_VIBPA RecName: Full=30S ribosomal protein S3 gi|28805245|dbj|BAC58526.1| ribosomal protein S3 [Vibrio parahaemolyticus RIMD 2210633] gi|262336104|gb|ACY49899.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. Ex25] gi|269830627|gb|EEZ84848.1| 30S ribosomal protein S3 [Vibrio alginolyticus 40B] gi|308087268|gb|EFO36963.1| ribosomal protein S3 [Vibrio parahaemolyticus Peru-466] gi|308090018|gb|EFO39713.1| ribosomal protein S3 [Vibrio parahaemolyticus AN-5034] gi|308111810|gb|EFO49350.1| ribosomal protein S3 [Vibrio parahaemolyticus K5030] gi|328471840|gb|EGF42717.1| 30S ribosomal protein S3 [Vibrio parahaemolyticus 10329] Length = 232 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIK ++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223 >gi|228989325|ref|ZP_04149316.1| 30S ribosomal protein S3 [Bacillus pseudomycoides DSM 12442] gi|228995507|ref|ZP_04155175.1| 30S ribosomal protein S3 [Bacillus mycoides Rock3-17] gi|229003132|ref|ZP_04160978.1| 30S ribosomal protein S3 [Bacillus mycoides Rock1-4] gi|229015518|ref|ZP_04172516.1| 30S ribosomal protein S3 [Bacillus cereus AH1273] gi|229021727|ref|ZP_04178309.1| 30S ribosomal protein S3 [Bacillus cereus AH1272] gi|229027964|ref|ZP_04184117.1| 30S ribosomal protein S3 [Bacillus cereus AH1271] gi|229074177|ref|ZP_04207223.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-18] gi|229083436|ref|ZP_04215784.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-44] gi|229094838|ref|ZP_04225843.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-29] gi|229100915|ref|ZP_04231719.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-28] gi|229113792|ref|ZP_04243227.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-3] gi|229170967|ref|ZP_04298568.1| 30S ribosomal protein S3 [Bacillus cereus MM3] gi|228612507|gb|EEK69728.1| 30S ribosomal protein S3 [Bacillus cereus MM3] gi|228669663|gb|EEL25070.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-3] gi|228682494|gb|EEL36567.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-28] gi|228688581|gb|EEL42454.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-29] gi|228699869|gb|EEL52506.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-44] gi|228708947|gb|EEL61074.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-18] gi|228733352|gb|EEL84181.1| 30S ribosomal protein S3 [Bacillus cereus AH1271] gi|228739595|gb|EEL90009.1| 30S ribosomal protein S3 [Bacillus cereus AH1272] gi|228745805|gb|EEL95809.1| 30S ribosomal protein S3 [Bacillus cereus AH1273] gi|228758095|gb|EEM07294.1| 30S ribosomal protein S3 [Bacillus mycoides Rock1-4] gi|228764236|gb|EEM13115.1| 30S ribosomal protein S3 [Bacillus mycoides Rock3-17] gi|228770403|gb|EEM18976.1| 30S ribosomal protein S3 [Bacillus pseudomycoides DSM 12442] Length = 219 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYITVRLKDSAVAKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A+T YG G+KV++ + + Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219 >gi|163938124|ref|YP_001643008.1| 30S ribosomal protein S3 [Bacillus weihenstephanensis KBAB4] gi|229009625|ref|ZP_04166851.1| 30S ribosomal protein S3 [Bacillus mycoides DSM 2048] gi|229053962|ref|ZP_04195396.1| 30S ribosomal protein S3 [Bacillus cereus AH603] gi|229131124|ref|ZP_04260036.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST196] gi|229165104|ref|ZP_04292899.1| 30S ribosomal protein S3 [Bacillus cereus AH621] gi|163860321|gb|ABY41380.1| ribosomal protein S3 [Bacillus weihenstephanensis KBAB4] gi|228618367|gb|EEK75397.1| 30S ribosomal protein S3 [Bacillus cereus AH621] gi|228652337|gb|EEL08262.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST196] gi|228721380|gb|EEL72901.1| 30S ribosomal protein S3 [Bacillus cereus AH603] gi|228751647|gb|EEM01447.1| 30S ribosomal protein S3 [Bacillus mycoides DSM 2048] Length = 219 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 144/220 (65%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER Sbjct: 1 MGQKVNPIGLRVGIIRDWESRWFAE-KDYATLLHEDIKIREYITVRLKDSAVAKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A+T YG G+KV++ + + Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219 >gi|254517476|ref|ZP_05129532.1| ribosomal protein S3 [Clostridium sp. 7_2_43FAA] gi|226911225|gb|EEH96426.1| ribosomal protein S3 [Clostridium sp. 7_2_43FAA] Length = 222 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIRE+++ L AG++KI IER Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYASKKNFADNLIEDNKIREFVKKELFSAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL+ + N + +++ EV E NA L+A++ Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGAGIEALKAKLAKVTDNKNLLINIVEVKNAEANAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+RV FRRAMK+++Q AMR GA GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAAQLEKRVSFRRAMKQSIQRAMRLGAKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A+T YG G+KV+V + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKKEE 219 >gi|258513646|ref|YP_003189868.1| 30S ribosomal protein S3 [Desulfotomaculum acetoxidans DSM 771] gi|257777351|gb|ACV61245.1| ribosomal protein S3 [Desulfotomaculum acetoxidans DSM 771] Length = 220 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 94/214 (43%), Positives = 149/214 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W ++WFA + LL ED+ IR++++ L AGV++I IER Sbjct: 1 MGQKVNPKGLRIGIIKDWEAKWFADKKNFSGLLLEDVNIRKHIKKKLYPAGVSRIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG++IG+ GT++E +RK+L +T ++++++ E+ PEI + L+A++I Sbjct: 61 ANRVKISIHTAKPGIVIGRGGTEVESLRKQLEKLTGKQVNINIVEIKVPEIESQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQ +E+R+ FRRAMK+ V AM+ GA G+++ SGRL GAE++R E Y EG+VPL TLRA Sbjct: 121 AQAIEKRIAFRRAMKQNVSRAMKMGAKGIRIACSGRLGGAEIARAEWYSEGKVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A+T YG GIKV++ + + ++ Sbjct: 181 DIDYGFAEADTTYGKIGIKVWIYKGEVLPEAKKA 214 >gi|326792601|ref|YP_004310422.1| ribosomal protein S3 [Clostridium lentocellum DSM 5427] gi|326543365|gb|ADZ85224.1| ribosomal protein S3 [Clostridium lentocellum DSM 5427] Length = 219 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 146/211 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W++RW+A ++ L ED KIR++++ L AG+ K+ IER Sbjct: 1 MGQKVNPHGLRVGVIKEWDARWYADKKDFANNLVEDDKIRKFIKKKLYAAGIDKVEIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V++++PG++IGK G I+ +RK++ +T +++ +++ EV +PE A L+A++I Sbjct: 61 SKRVRVHVHTSKPGIVIGKGGASIDLLRKEVEKLTANKVAINIVEVKRPEACAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK+A+ A + GA G+KV SGRL GAE++RTE Y +G +PLQTLRA Sbjct: 121 ALQLENRVSFRRAMKQAMGKAFKSGAKGIKVSCSGRLGGAEMARTEQYSDGNIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 I+YG A A+T YG G+KV++ + + Sbjct: 181 DIEYGFAEADTTYGKIGVKVWIYKGEVLPTK 211 >gi|260886882|ref|ZP_05898145.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185] gi|330839320|ref|YP_004413900.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185] gi|260863481|gb|EEX77981.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185] gi|329747084|gb|AEC00441.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185] Length = 223 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 155/220 (70%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++ LHED+KIR+YL+ L AGV+KI ER+ Sbjct: 1 MGQKVNPNGIRIGIVKDWDAKWYAD-KDFADNLHEDIKIRKYLKDSLGAAGVSKIETERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IG+ G+ IE+I++ L T + ++++E+ +P+++ATL+A++I Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGKTEKTVDINISEIRQPDLDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMK++V MR GA G+KV SGRL GAE++R+E Y EG +PL TLRA Sbjct: 120 AQQLERRIAFRRAMKQSVGRTMRLGAKGIKVKVSGRLGGAEIARSEAYREGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYGTA A T YG G+KV++ + + + + AA Sbjct: 180 DIDYGTAEARTTYGRIGVKVWIFKGEILPEKKQSKRAAAE 219 >gi|325663056|ref|ZP_08151506.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086663|ref|ZP_08335740.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470510|gb|EGC73740.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409829|gb|EGG89264.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 218 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKAELAKFTDKKLVVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV++ + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKE 211 >gi|152060912|sp|A0LIJ6|RS3_SYNFM RecName: Full=30S ribosomal protein S3 Length = 208 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 109/209 (52%), Positives = 154/209 (73%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ +W+SRWFA +Y L+HED KIR+Y++ L AG+AK+ IER Sbjct: 1 MGQKVHPTGFRLGILKSWDSRWFA-TKDYAKLVHEDRKIRDYIKARLYHAGIAKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++ARPG++IGKKG +IE +R+ L EI + + EV +PE++ATL+ ++I Sbjct: 60 ANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QL RRV FRRAMKRAV +A++FGA GV+V ++GRL GAE++R E Y EGRVPL TLRA Sbjct: 120 SLQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYGTA+A T YG+ G+KV++ + + Sbjct: 180 DIDYGTAIARTTYGAIGVKVWIFKGEVLP 208 >gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4] gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4] Length = 236 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 95/222 (42%), Positives = 145/222 (65%), Gaps = 3/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRW+A Y + DL+IR+YL+ L +A ++++ IER Sbjct: 1 MGQKVQPTGFRLGITEQWRSRWYANKGNYAKNIGGDLEIRKYLKKRLAKAALSRVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 ++ + ++RPG++IGKKG +I ++++ + +H+ V E+ +P+++A L A Sbjct: 61 GDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGLPKGSVHVEVVEIKQPDLDAQLTA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE RV FRRA+++AVQ+A + GA G+++ SGRLNGAE+ R E EGRVPL T Sbjct: 121 DRIAEQLEGRVAFRRAVRKAVQAATKAGAKGIRIQCSGRLNGAEMGRVEWSREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA ID+ TA A T G+ GIKV++ L +++ + PA E Sbjct: 181 LRAKIDFATATASTTMGAVGIKVWIYLGEKLPGQPAPNPALE 222 >gi|161486819|ref|NP_722318.2| 30S ribosomal protein S3 [Streptococcus mutans UA159] gi|27734496|sp|P59186|RS3_STRMU RecName: Full=30S ribosomal protein S3 Length = 217 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIVEIKSPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPARKNTK 214 >gi|261250411|ref|ZP_05942986.1| SSU ribosomal protein S3p (S3e) [Vibrio orientalis CIP 102891] gi|260938980|gb|EEX94967.1| SSU ribosomal protein S3p (S3e) [Vibrio orientalis CIP 102891] Length = 232 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDY T+ A T YG GIK ++ + E+ A E + + Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223 >gi|259502537|ref|ZP_05745439.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041] gi|259169489|gb|EEW53984.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041] Length = 221 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 93/219 (42%), Positives = 146/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG G+K ++ + + + + Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPAKKNENDDEQ 218 >gi|225376415|ref|ZP_03753636.1| hypothetical protein ROSEINA2194_02057 [Roseburia inulinivorans DSM 16841] gi|225211791|gb|EEG94145.1| hypothetical protein ROSEINA2194_02057 [Roseburia inulinivorans DSM 16841] Length = 218 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ LL ED IR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADLLVEDYNIRTYLKKKLYAAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKAEVQKFTSKKLVVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRVSFRRAMKSCMSRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|171462885|ref|YP_001796998.1| ribosomal protein S3 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192423|gb|ACB43384.1| ribosomal protein S3 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 271 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 117/225 (52%), Positives = 159/225 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W SRW+A +++ +L ED+ +R YL+ LK A V+K++IER Sbjct: 1 MGQKINPTGFRLAVTKNWTSRWYANNTDFAKMLKEDVDVRSYLKKKLKNASVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +YS+RPG++IGKKG DIE +R++L +H ++ E+ KPE++A LIA SI Sbjct: 61 AKSARITIYSSRPGVVIGKKGEDIEVLRRELQKRMGVPVHANIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TL+A Sbjct: 121 TQQLEKRIMFRRAMKRAMQKAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY T+ AET YG G+KV+V D + AA+ +K Sbjct: 181 DIDYATSEAETTYGIIGVKVWVYKGDALGRGAEAQVAAQVAEEKK 225 >gi|86739301|ref|YP_479701.1| 30S ribosomal protein S3 [Frankia sp. CcI3] gi|123737801|sp|Q2JFH0|RS3_FRASC RecName: Full=30S ribosomal protein S3 gi|86566163|gb|ABD09972.1| SSU ribosomal protein S3P [Frankia sp. CcI3] Length = 315 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A T +G G+KV++ D V Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217 >gi|254431944|ref|ZP_05045647.1| ribosomal protein S3 [Cyanobium sp. PCC 7001] gi|197626397|gb|EDY38956.1| ribosomal protein S3 [Cyanobium sp. PCC 7001] Length = 242 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQDHRSRWYAPSKTYPTLLQEDDRIRKFIHKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R +K N ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRNGIQKTVGDANRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRVIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEKD 226 LRA IDY T +A T YG GIKV+V + + +P AA R + Sbjct: 181 LRADIDYATKLASTTYGVLGIKVWVFKGEVLPGQKEQLPVGAAPRRRTSRQ 231 >gi|300782614|ref|YP_003762905.1| 30S ribosomal protein S3 [Amycolatopsis mediterranei U32] gi|299792128|gb|ADJ42503.1| small subunit ribosomal protein S3 [Amycolatopsis mediterranei U32] Length = 279 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 6/228 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLATGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNPEADAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q S G++V GRL GAE+SR+E Y +GRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 A IDYG A+T +G G+KV++ + V + A E R + + Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGELVGG----LKAREARDAAERA 223 >gi|320094574|ref|ZP_08026340.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978489|gb|EFW10066.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 178 str. F0338] Length = 270 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 102/224 (45%), Positives = 152/224 (67%), Gaps = 5/224 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED+ IR+ L +L++AG+AK+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFSDSTTKGQRYSDYVAEDVAIRKALTDNLERAGIAKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R+ L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRQSLEKLTGKQVQLNILEVKNPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLRA+IDYG A T +G G+KV++ D +++ + AE Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQ 223 >gi|328958722|ref|YP_004376108.1| 30S ribosomal protein S3 [Carnobacterium sp. 17-4] gi|328675046|gb|AEB31092.1| 30S ribosomal protein S3 [Carnobacterium sp. 17-4] Length = 218 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+G+ W+S+W+A ++ LHED+ IREY+ L +A V+K+ IER Sbjct: 1 MGQKINPTGLRVGIIRDWDSKWYAE-KDFANFLHEDIAIREYIAKKLSEASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++A+PG++IGK G++++ +RKKL+++T +H+++ E+ +P+++A L+A+ I Sbjct: 60 ANRVNVSVHTAKPGMVIGKGGSEVDALRKKLNDLTGKRVHINIVEIKRPDLDAKLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E + EG VPL TLRA Sbjct: 120 ASQLESRVAFRRAQKQAIQRTMRSGAKGIKTMVSGRLNGADIARSETHSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG GIKV++ + + +T + Sbjct: 180 DIDYAWEEAATTYGKLGIKVWIYRGEVLPAKKNTEKGGK 218 >gi|239787569|emb|CAX84037.1| 30S ribosomal protein S3 [uncultured bacterium] Length = 214 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 114/216 (52%), Positives = 159/216 (73%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ TW++RW+A + +LL ED+K+RE+++ L+ A V+KI+IER Sbjct: 1 MGQKVHPTGFRLGITKTWDTRWYAD-KAFASLLLEDIKLREWIKKRLEHASVSKIIIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI +++ARPG+IIGKKG DIEK++ ++ + N+E+ +++ EV KPE A LIA+++ Sbjct: 60 AKKARINIHTARPGIIIGKKGADIEKLKNDIAKVANTEVAINIVEVRKPEAEAQLIAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL RRV FRRAMKRAV SAMR GA G+++ +GRL G E++RTE Y EGRVPL TLRA Sbjct: 120 AQQLVRRVAFRRAMKRAVTSAMRLGAMGIRINCAGRLGGGEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 I+YG A A T YG G+KV+V + E+ D + P Sbjct: 180 DIEYGFADANTTYGVIGVKVWVF-KGEIIDREIRRP 214 >gi|312866522|ref|ZP_07726739.1| ribosomal protein S3 [Streptococcus downei F0415] gi|311097953|gb|EFQ56180.1| ribosomal protein S3 [Streptococcus downei F0415] Length = 217 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 145/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+++W+A EY LHEDL IR+++ L A V+ + IER Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYADYLHEDLAIRKFISKELADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKAPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|306832553|ref|ZP_07465693.1| 30S ribosomal protein S3 [Streptococcus bovis ATCC 700338] gi|304425311|gb|EFM28437.1| 30S ribosomal protein S3 [Streptococcus bovis ATCC 700338] Length = 217 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 VRQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|257866535|ref|ZP_05646188.1| ribosomal protein S3 [Enterococcus casseliflavus EC30] gi|257872950|ref|ZP_05652603.1| ribosomal protein S3 [Enterococcus casseliflavus EC10] gi|257876139|ref|ZP_05655792.1| ribosomal protein S3 [Enterococcus casseliflavus EC20] gi|325567370|ref|ZP_08144037.1| 30S ribosomal protein S3 [Enterococcus casseliflavus ATCC 12755] gi|257800493|gb|EEV29521.1| ribosomal protein S3 [Enterococcus casseliflavus EC30] gi|257807114|gb|EEV35936.1| ribosomal protein S3 [Enterococcus casseliflavus EC10] gi|257810305|gb|EEV39125.1| ribosomal protein S3 [Enterococcus casseliflavus EC20] gi|325158803|gb|EGC70949.1| 30S ribosomal protein S3 [Enterococcus casseliflavus ATCC 12755] Length = 218 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDLKIR+++ L A V+ + IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLKIRKFIASKLADAAVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNSLTGKRVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMRSGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNTEKGGK 218 >gi|237786389|ref|YP_002907094.1| 30S ribosomal protein S3 [Corynebacterium kroppenstedtii DSM 44385] gi|259495239|sp|C4LL46|RS3_CORK4 RecName: Full=30S ribosomal protein S3 gi|237759301|gb|ACR18551.1| 30S ribosomal protein S3 [Corynebacterium kroppenstedtii DSM 44385] Length = 249 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 103/216 (47%), Positives = 148/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L++AG+A ++IERT Sbjct: 1 MGQKIHPYGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSKGLERAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR KL +T ++ L++ EV + +A L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGKLEKLTGKQVQLNILEVKNVDASAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A IDYGT A T +G G+KV++ D V ++ Sbjct: 180 AEIDYGTFEAHTTFGRIGVKVWIYKGDVVGGRRESL 215 >gi|210623194|ref|ZP_03293633.1| hypothetical protein CLOHIR_01583 [Clostridium hiranonis DSM 13275] gi|210153731|gb|EEA84737.1| hypothetical protein CLOHIR_01583 [Clostridium hiranonis DSM 13275] Length = 263 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 147/223 (65%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWF G E+G+ + ED IR++L+ L AGVAKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFTNNGKEFGSFILEDHNIRKFLKKKLYSAGVAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ++ A+PG++IG+ GT+IE ++ +L +T + +++ EV + +A L+A++ Sbjct: 61 SANKVKLDLHVAKPGVVIGRAGTEIEALKAELEKLTGKTVIVNIVEVKNVDRDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +ERRV FRRAMK+ +Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IAAAIERRVAFRRAMKQGIQRAMKSGAKGIKVAASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 + IDYG A A+T YG GIKV++ + + Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEVLPTKHVPGADPRPER 223 >gi|296875398|ref|ZP_06899472.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 15912] gi|312866953|ref|ZP_07727164.1| ribosomal protein S3 [Streptococcus parasanguinis F0405] gi|322390666|ref|ZP_08064180.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 903] gi|296433591|gb|EFH19364.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 15912] gi|311097435|gb|EFQ55668.1| ribosomal protein S3 [Streptococcus parasanguinis F0405] gi|321142639|gb|EFX38103.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 903] Length = 217 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 144/215 (66%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKDAK 214 >gi|169823858|ref|YP_001691469.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 29328] gi|302379779|ref|ZP_07268263.1| ribosomal protein S3 [Finegoldia magna ACS-171-V-Col3] gi|303234779|ref|ZP_07321405.1| ribosomal protein S3 [Finegoldia magna BVS033A4] gi|226697713|sp|B0RZU6|RS3_FINM2 RecName: Full=30S ribosomal protein S3 gi|167830663|dbj|BAG07579.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 29328] gi|302312367|gb|EFK94364.1| ribosomal protein S3 [Finegoldia magna ACS-171-V-Col3] gi|302494120|gb|EFL53900.1| ribosomal protein S3 [Finegoldia magna BVS033A4] Length = 244 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 145/210 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++G L ED KIRE ++ AG++ + IER Sbjct: 1 MGQKVNPKGLRVGVIKDWDSRWFADKKDFGDYLVEDHKIRELIKKESFSAGISSVSIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +A+PG++IG++G +E+++ KL +T ++ ++V E+ +++A L+A++I Sbjct: 61 SNKIKVTINTAKPGMVIGRQGAGVEELKNKLEKLTGKKLIINVEEIKFQDLDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ +Q +MR GA G+K + SGRL GA+++R+E Y EG +PLQTLRA Sbjct: 121 ASQLERRISFRRAMKQTMQRSMRAGALGIKTMVSGRLGGADMARSEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A A+T YG G+KV++ + + Sbjct: 181 AIDYGFAEADTTYGKLGVKVWLYKGEMLPG 210 >gi|312870506|ref|ZP_07730625.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3] gi|311093968|gb|EFQ52293.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3] Length = 221 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 93/219 (42%), Positives = 146/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG G+K ++ + + + + Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNENDDEQ 218 >gi|238898921|ref|YP_002924603.1| 30S ribosomal subunit protein S3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259495251|sp|C4K7B2|RS3_HAMD5 RecName: Full=30S ribosomal protein S3 gi|229466681|gb|ACQ68455.1| 30S ribosomal subunit protein S3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 233 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 103/226 (45%), Positives = 150/226 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W S W+A E+ L D K+R++L L +A ++ ++IER Sbjct: 1 MGQKVHPKIIRLGIIKYWLSTWYANTKEFAENLQGDFKVRQFLTKELSKASISHVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+RK+++ + ++ E+ KPE++ L+A I Sbjct: 61 PKSIRVTIYTARPGIVIGKKGEDVEKLRKRVALIAGVPAQINTYEIRKPELDPKLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY T+ A T YG G+KV++ + + A + + ++ Sbjct: 181 DIDYDTSEAHTTYGVIGVKVWIFKGEILGTVLPFKQAEQPKQQQRK 226 >gi|302388718|ref|YP_003824539.1| SSU ribosomal protein S3P [Thermosediminibacter oceani DSM 16646] gi|302199346|gb|ADL06916.1| SSU ribosomal protein S3P [Thermosediminibacter oceani DSM 16646] Length = 230 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 142/218 (65%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W+SRW++ + L+ ED IR++++ AG++++ IER Sbjct: 1 MGQKVHPHGLRIGIIRDWDSRWYSE-KNFADLVLEDFNIRKHIKNKFYTAGISRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IGK G +E++RK L MT +I ++V E+ P++ A L+A++I Sbjct: 60 ANRIKVTIHTAKPGMVIGKGGAGVEELRKDLEAMTGKQISINVIEIKNPDVEAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERR+ +RRAMK+A+ A++ GA G+K + SGRL GAE++RTE Y EG +PLQ LRA Sbjct: 120 AAQIERRISYRRAMKQAIARALKAGAKGIKTMVSGRLAGAEIARTEWYREGTIPLQKLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 I YG A A T YG G+KV++ D + Sbjct: 180 DISYGFAEAHTTYGRIGVKVWIYRGDVLPTRKQEKQVE 217 >gi|114330580|ref|YP_746802.1| 30S ribosomal protein S3 [Nitrosomonas eutropha C91] gi|122314426|sp|Q0AII9|RS3_NITEC RecName: Full=30S ribosomal protein S3 gi|114307594|gb|ABI58837.1| SSU ribosomal protein S3P [Nitrosomonas eutropha C91] Length = 215 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 114/214 (53%), Positives = 159/214 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W+SRW+A ++ L+ED+ +R+YLQ L A V I+IER Sbjct: 1 MGQKINPTGFRLSVLKNWSSRWYANTKKFSVFLNEDINVRQYLQKRLAHASVGSIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I ++++RPG++IGKKG DIE +RK + + N +H+++ E+ KPEI+A LIA SI Sbjct: 61 SRNAKITIHTSRPGVVIGKKGEDIEILRKNVEKLMNVPVHINIEEIRKPEIDAQLIAASI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAIQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 +DYGT+ A+T YG G+KV+V +++S D Sbjct: 181 EVDYGTSEAKTTYGVIGVKVWVFKGEQLSVRDRQ 214 >gi|172040001|ref|YP_001799715.1| 30S ribosomal protein S3 [Corynebacterium urealyticum DSM 7109] gi|226697690|sp|B1VEU2|RS3_CORU7 RecName: Full=30S ribosomal protein S3 gi|171851305|emb|CAQ04281.1| 30S ribosomal protein S3 [Corynebacterium urealyticum DSM 7109] Length = 248 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 107/223 (47%), Positives = 150/223 (67%), Gaps = 2/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI P RLG+ W SRW+A +Y L ED+KIRE+L L++AG+A ++IERT Sbjct: 1 MGQKIQPHGLRLGITSDWRSRWYAD-KQYADYLAEDIKIREFLSEGLERAGIANVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 H R+ +++ARPG++IG++G++ ++IR KL +T ++ L++ EV + NA L+AQSI Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGKLEKLTGKQVQLNILEVKNVDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDYGT A T +G G+KV++ D V ++ A Sbjct: 180 AEIDYGTHEAHTTFGRIGVKVWIYKGDVVGGRRESLMNARDER 222 >gi|51894204|ref|YP_076895.1| 30S ribosomal protein S3 [Symbiobacterium thermophilum IAM 14863] gi|61215495|sp|Q67JU9|RS3_SYMTH RecName: Full=30S ribosomal protein S3 gi|51857893|dbj|BAD42051.1| 30S ribosomal protein S3 [Symbiobacterium thermophilum IAM 14863] Length = 267 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 100/203 (49%), Positives = 148/203 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W++RW+A + LL ED+KIR+Y++ L AG+++I IER Sbjct: 1 MGQKVHPKGLRIGIVKDWDTRWYADKRNFSDLLVEDVKIRKYIKKTLYAAGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RIIV++A+PG++IG++G I +++ +L+ MT +I L V E+ PE++A L+A+SI Sbjct: 61 GGRIRIIVHTAKPGMVIGRQGQGIAELQNQLAQMTGKQISLDVKEIRLPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ RRAMK+A+Q AMR GA GV++I SGR+ GAE++R+E EG VPL TLRA Sbjct: 121 AQQLEKRMSHRRAMKQAIQRAMRLGAQGVRIIVSGRIGGAEIARSERAWEGTVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203 IDYG A A+T +G G+KV++ Sbjct: 181 DIDYGFAEADTTFGKIGVKVWIY 203 >gi|145588248|ref|YP_001154845.1| ribosomal protein S3 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189045027|sp|A4SUW7|RS3_POLSQ RecName: Full=30S ribosomal protein S3 gi|145046654|gb|ABP33281.1| SSU ribosomal protein S3P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 275 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 115/209 (55%), Positives = 156/209 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W SRW+A +++ +L ED+ +R YL+ LK A V+K++IER Sbjct: 1 MGQKINPTGFRLAVTKNWTSRWYANNTDFAKMLKEDVDVRIYLKKKLKNASVSKVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI +YS+RPG++IGKKG DIE +R++L +H+++ E+ KPE++A LIA SI Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLRRELQKRMGVPVHVNIEEIRKPEVDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TL+A Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLKA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDY T+ AET YG G+KV+V D + Sbjct: 181 DIDYATSEAETTYGIIGVKVWVYKGDTLG 209 >gi|20808654|ref|NP_623825.1| 30S ribosomal protein S3 [Thermoanaerobacter tengcongensis MB4] gi|27734503|sp|Q8R7W0|RS3_THETN RecName: Full=30S ribosomal protein S3 gi|20517288|gb|AAM25429.1| Ribosomal protein S3 [Thermoanaerobacter tengcongensis MB4] Length = 221 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 153/218 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W ++W+A+ ++ +L ED+KIR Y++ L AG+ +I+IER Sbjct: 1 MGQKVHPYGLRVGVTKDWLAKWYAKDKDFPNILVEDIKIRNYIKEKLYAAGIPQIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+A+PG++IGK GT ++++R++L MTN + L++ EV PE++A L+A++I Sbjct: 61 SNRIKIDIYAAKPGMVIGKGGTGVDRLREELEKMTNKTVILNIIEVKTPELSAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV+++ + + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218 >gi|148381415|ref|YP_001255956.1| ribosomal protein S3 [Clostridium botulinum A str. ATCC 3502] gi|153934132|ref|YP_001385790.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 19397] gi|153935588|ref|YP_001389197.1| 30S ribosomal protein S3 [Clostridium botulinum A str. Hall] gi|226697683|sp|A7FZ63|RS3_CLOB1 RecName: Full=30S ribosomal protein S3 gi|226697686|sp|A5I7K0|RS3_CLOBH RecName: Full=30S ribosomal protein S3 gi|148290899|emb|CAL85035.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 3502] gi|152930176|gb|ABS35676.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 19397] gi|152931502|gb|ABS37001.1| 30S ribosomal protein S3 [Clostridium botulinum A str. Hall] Length = 223 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|170756663|ref|YP_001783115.1| 30S ribosomal protein S3 [Clostridium botulinum B1 str. Okra] gi|226697687|sp|B1IGE8|RS3_CLOBK RecName: Full=30S ribosomal protein S3 gi|169121875|gb|ACA45711.1| 30S ribosomal protein S3 [Clostridium botulinum B1 str. Okra] Length = 223 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLGGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|291544466|emb|CBL17575.1| SSU ribosomal protein S3P [Ruminococcus sp. 18P13] Length = 260 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 102/236 (43%), Positives = 148/236 (62%), Gaps = 10/236 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA +++G L ED +R +++ L AGV KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANKADFGDTLVEDYNVRNFIKKSLYAAGVPKIEIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI ++ A+PG++IG+ G +IEK+R +L M ++ +++ EV +P++NA L+A+ I Sbjct: 61 AEKVRINIHCAKPGVVIGRGGAEIEKLRAQLEAMMKKQVAVNIIEVKQPDMNAQLVAEKI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LE RV FRRAMK+++ +MR GA G+K SGRL GAE++R+E Y EG +PLQT+RA Sbjct: 121 ALDLENRVSFRRAMKQSIGRSMRLGAKGIKTRVSGRLGGAEIARSETYHEGTIPLQTIRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----------DSTIPAAEHRVVEKD 226 IDYGTA A T YG G+KV++ + + P A +D Sbjct: 181 DIDYGTAEAHTTYGRLGVKVWIYKGEVLKGDAAKAAAEKAKYEKKPEARPERKRRD 236 >gi|187776582|ref|ZP_02993055.1| hypothetical protein CLOSPO_00096 [Clostridium sporogenes ATCC 15579] gi|187775241|gb|EDU39043.1| hypothetical protein CLOSPO_00096 [Clostridium sporogenes ATCC 15579] Length = 223 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ +L + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNQLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRTGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|251799636|ref|YP_003014367.1| ribosomal protein S3 [Paenibacillus sp. JDR-2] gi|247547262|gb|ACT04281.1| ribosomal protein S3 [Paenibacillus sp. JDR-2] Length = 220 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 103/215 (47%), Positives = 152/215 (70%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIREYL+ LK A V+ I IER Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREYLKNKLKDAAVSHIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + + +A+PG++IGK G+++E +R +L +T ++H++++E+ + +++A L+A+S Sbjct: 60 ANRVNVTINTAKPGMVIGKGGSEVESLRTELGKITKGKKVHINISEIKQADLDAILVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV FRRA+K+A+Q +MR GA G+K SGRL GAE++R+E Y EG VPL TLR Sbjct: 120 IAQQLERRVSFRRALKQAIQRSMRAGAKGIKTAVSGRLGGAEIARSEGYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA A T YG G+KV++ + + Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPAKKKA 214 >gi|153937998|ref|YP_001392828.1| 30S ribosomal protein S3 [Clostridium botulinum F str. Langeland] gi|189044969|sp|A7GJ68|RS3_CLOBL RecName: Full=30S ribosomal protein S3 gi|152933894|gb|ABS39392.1| 30S ribosomal protein S3 [Clostridium botulinum F str. Langeland] gi|295320808|gb|ADG01186.1| 30S ribosomal protein S3 [Clostridium botulinum F str. 230613] Length = 223 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEGDAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLGGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|228478008|ref|ZP_04062619.1| ribosomal protein S3 [Streptococcus salivarius SK126] gi|312862467|ref|ZP_07722710.1| ribosomal protein S3 [Streptococcus vestibularis F0396] gi|322515873|ref|ZP_08068815.1| 30S ribosomal protein S3 [Streptococcus vestibularis ATCC 49124] gi|228250188|gb|EEK09441.1| ribosomal protein S3 [Streptococcus salivarius SK126] gi|311102110|gb|EFQ60310.1| ribosomal protein S3 [Streptococcus vestibularis F0396] gi|322125660|gb|EFX96987.1| 30S ribosomal protein S3 [Streptococcus vestibularis ATCC 49124] Length = 217 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 149/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|322807800|emb|CBZ05375.1| SSU ribosomal protein S3p (S3e) [Clostridium botulinum H04402 065] Length = 223 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG++IGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMVIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|218294760|ref|ZP_03495614.1| ribosomal protein S3 [Thermus aquaticus Y51MC23] gi|218244668|gb|EED11192.1| ribosomal protein S3 [Thermus aquaticus Y51MC23] Length = 239 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 105/212 (49%), Positives = 142/212 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+PI FRLG+ W SRW+A +Y LL EDL+IR+YL L AG+A++ IER Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDLQIRDYLTKELYPAGLARVDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + V+ A+PG++IG+ G I+ +R L+ +T + L+V E+ P ++A L+AQ + Sbjct: 61 ADNVAVSVHVAKPGVVIGRGGEKIKVLRDALAKLTGKNVALNVQEIHNPNLSAPLVAQRV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE EGRVPLQTLRA Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAEGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG A+A T YG G+K YV L + + Sbjct: 181 NIDYGFALARTTYGVLGVKAYVFLGEVIGGQK 212 >gi|154505163|ref|ZP_02041901.1| hypothetical protein RUMGNA_02676 [Ruminococcus gnavus ATCC 29149] gi|153794642|gb|EDN77062.1| hypothetical protein RUMGNA_02676 [Ruminococcus gnavus ATCC 29149] Length = 218 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 146/209 (69%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A ++ L ED KIR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKEWDSRWYAE-KDFADNLVEDNKIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G++IEK++ +L+ TN ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGSEIEKVKAELAKFTNKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208 >gi|326203890|ref|ZP_08193752.1| ribosomal protein S3 [Clostridium papyrosolvens DSM 2782] gi|325985988|gb|EGD46822.1| ribosomal protein S3 [Clostridium papyrosolvens DSM 2782] Length = 222 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 93/218 (42%), Positives = 145/218 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A + + L ED+KIR +++ L +G+++I I+R Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKSFSSYLVEDVKIRNFIKKKLYISGISRIEIDRA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I V +A+PGL+IGK G IE++RK++ MT + +++ E+ PE++A L+A++I Sbjct: 61 ANKVKINVNTAKPGLVIGKGGQGIEELRKEIEKMTGKSVLINITEIKVPEMDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+A+ M+ GA G+K +GRL GAE++RTE Y +G +PLQTLRA Sbjct: 121 ASQLEKRISFRRAMKQAMSRTMKLGAKGIKTACAGRLGGAEIARTEHYHDGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+KV++ + + A Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAVKRDRKAE 218 >gi|167465559|ref|ZP_02330648.1| 30S ribosomal protein S3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381120|ref|ZP_08055123.1| 30S ribosomal protein S3-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154696|gb|EFX46967.1| 30S ribosomal protein S3-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 220 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 158/226 (69%), Gaps = 8/226 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ R+GV W S+W+A ++GALL ED+KIRE+L+ LK + V+ I IER Sbjct: 1 MGQKVSPVGLRIGVIRDWESKWYAD-KDFGALLIEDVKIREFLKNKLKDSAVSHIDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IG+ G+++E IR ++ MT +IH++++EV PE++A L+A+SI Sbjct: 60 ANRVNVTIHTAKPGMVIGRGGSEVEAIRAHIARMTGKKIHINISEVKNPELDAILVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMK+A+Q MR GA G+KV SGRL GA+++R+E Y EG VPL TLRA Sbjct: 120 AQQLERRVSFRRAMKQAIQRTMRAGAKGIKVTTSGRLGGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYGTA A T YG G+KV++ + + P A+ + + Sbjct: 180 DIDYGTAEAHTTYGRTGVKVWIYRGEVL-------PTAKKKAATEG 218 >gi|257870523|ref|ZP_05650176.1| ribosomal protein S3 [Enterococcus gallinarum EG2] gi|257804687|gb|EEV33509.1| ribosomal protein S3 [Enterococcus gallinarum EG2] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDLKIR+++ L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLKIRKFIASKLADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMRSGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218 >gi|322386348|ref|ZP_08059978.1| 30S ribosomal protein S3 [Streptococcus cristatus ATCC 51100] gi|321269572|gb|EFX52502.1| 30S ribosomal protein S3 [Streptococcus cristatus ATCC 51100] Length = 217 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|313681325|ref|YP_004059063.1| SSU ribosomal protein s3p [Sulfuricurvum kujiense DSM 16994] gi|313154185|gb|ADR32863.1| SSU ribosomal protein S3P [Sulfuricurvum kujiense DSM 16994] Length = 236 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 113/226 (50%), Positives = 151/226 (66%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NPI RLG+N W SRWF L ED KIR YL+ L AGV+ I+IERT Sbjct: 1 MGHKVNPIGLRLGINRNWESRWFPNFKTAAVSLGEDHKIRTYLKKELYYAGVSNIVIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG+DIEKI++ L N+ + +++ E K + +A L+A+++ Sbjct: 61 AKRLRVTIIAARPGIIIGKKGSDIEKIKESLQNLIGKPVAVNIKEEKKAQASAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A R GA G+KV +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQNAQRAGAKGIKVSVAGRLGGAEIARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG GIKV++ + + + P A+ E+ Sbjct: 181 KIDYGFAEAHTTYGVIGIKVWIFKGEVL--TKGIQPEAKESKEERG 224 >gi|37912955|gb|AAR05287.1| ribosomal protein S3 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063183|gb|AAR38020.1| ribosomal protein S3 [uncultured marine bacterium 562] Length = 219 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 106/210 (50%), Positives = 154/210 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG++ N+ W+A+G ++ L +DLK+REY + +LK + ++KI +ER+ Sbjct: 1 MGQKVNPTGFRLGISKKQNANWYAKGKDFSTNLVQDLKVREYFKKNLKNSSISKIELERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N + +Y++RPG+IIGK+G +I+ ++K + + +++ EV KP+++A ++A+ + Sbjct: 61 AENFVVSIYTSRPGIIIGKRGEEIDNLKKAVQKIVKKPAQINIKEVRKPDLDAQILAEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV+FRRAMKR VQSA+R A GV+V SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLERRVMFRRAMKRTVQSALRQSAKGVRVEVSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYGTA A T YG G+KV+V + D Sbjct: 181 DIDYGTAEALTTYGIIGVKVWVFKGEITED 210 >gi|315640155|ref|ZP_07895277.1| 30S ribosomal protein S3 [Enterococcus italicus DSM 15952] gi|315484132|gb|EFU74606.1| 30S ribosomal protein S3 [Enterococcus italicus DSM 15952] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 150/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADFLHEDLRIRKFIASKLADAAVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNVSIHTARPGMVIGKGGSEVENLRKELNKLTGKKVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEGRVAFRRAQKQAIQRSMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPAKKNTEKGGK 218 >gi|331091661|ref|ZP_08340495.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403418|gb|EGG82977.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 2_1_46FAA] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IERT Sbjct: 1 MGQKVNPHGLRVGVIKEWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKAELQKFTDKKLVVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV++ + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKE 211 >gi|229542197|ref|ZP_04431257.1| ribosomal protein S3 [Bacillus coagulans 36D1] gi|229326617|gb|EEN92292.1| ribosomal protein S3 [Bacillus coagulans 36D1] Length = 219 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 1/215 (0%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK+NPI R+GV W S+W+A +Y LLHED+KIREY+ L A V+ + IER Sbjct: 3 GQKVNPIGLRIGVIRDWESKWYAE-KDYADLLHEDIKIREYIAKRLADASVSGVEIERAA 61 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 I + +A+PG++IGK G+++E +RK L+ +T +H+++ EV K +I+A L+A++IA Sbjct: 62 NRVNITIRTAKPGMVIGKGGSEVEALRKALNALTGKRVHINIVEVKKADIDAKLVAENIA 121 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 +QLE RV FRRA K+A+Q AMR GA G++ SGRL GA+++R E Y EG VPL TLRA Sbjct: 122 RQLENRVSFRRAQKQAIQRAMRAGAKGIRTQVSGRLGGADIARAEHYSEGTVPLHTLRAD 181 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A A+T YG G+KV++ + + T Sbjct: 182 IDYAHAEADTTYGKLGVKVWIYRGEILPAKKKTEE 216 >gi|297588197|ref|ZP_06946841.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 53516] gi|297574886|gb|EFH93606.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 53516] Length = 244 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 144/210 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIRE ++ AG++ I IER Sbjct: 1 MGQKVNPKGLRVGVIKDWDSRWFADKKDFSDYLVEDHKIRELIKKESFSAGISSIAIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +A+PG++IG++G +E+++ KL +T ++ ++V E+ +++A L+A++I Sbjct: 61 SNKIKVTINTAKPGMVIGRQGAGVEELKNKLEKLTGKKLIINVEEIKFQDLDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ +Q +MR GA G+K + SGRL GA+++R+E Y EG +PLQTLRA Sbjct: 121 ASQLERRISFRRAMKQTMQRSMRAGALGIKTMVSGRLGGADMARSEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A A+T YG G+KV++ + + Sbjct: 181 AIDYGFAEADTTYGKLGVKVWLYKGEMLPG 210 >gi|116671515|ref|YP_832448.1| 30S ribosomal protein S3P [Arthrobacter sp. FB24] gi|152060844|sp|A0JZ78|RS3_ARTS2 RecName: Full=30S ribosomal protein S3 gi|116611624|gb|ABK04348.1| SSU ribosomal protein S3P [Arthrobacter sp. FB24] Length = 277 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 104/231 (45%), Positives = 151/231 (65%), Gaps = 4/231 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKAGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 TLRA+IDYG A+T +G G+KV++ D S + AA S Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTSKELAQQAAAAPSRGRGAS 231 >gi|291535436|emb|CBL08548.1| SSU ribosomal protein S3P [Roseburia intestinalis M50/1] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 98/209 (46%), Positives = 143/209 (68%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADFLVEDYNIRTYLKKKLYAAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKGEVQKFTDKKLVVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRVSFRRAMKSCMGRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208 >gi|326773969|ref|ZP_08233251.1| ribosomal protein S3 [Actinomyces viscosus C505] gi|326636108|gb|EGE37012.1| ribosomal protein S3 [Actinomyces viscosus C505] Length = 273 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A+T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211 >gi|323490629|ref|ZP_08095834.1| 30S ribosomal protein S3 [Planococcus donghaensis MPA1U2] gi|323395721|gb|EGA88562.1| 30S ribosomal protein S3 [Planococcus donghaensis MPA1U2] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 152/219 (69%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI R+G+ W S+W+A +Y LLHED+KIREY++ LK+A V+KI IER Sbjct: 1 MGQKIHPIGMRIGIIRDWESKWYAE-KDYATLLHEDIKIREYVEARLKEASVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L++MT +H+++ E+ + +++A L+A+S+ Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEVLRKQLNSMTGKRVHINIIEIKRADLDARLVAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRVSFRRAQKQAIQRTMRSGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A A+T YG G+KV++ + + + + Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKKSEEGGK 218 >gi|72163039|ref|YP_290696.1| 30S ribosomal protein S3 [Thermobifida fusca YX] gi|91207846|sp|Q47LJ9|RS3_THEFY RecName: Full=30S ribosomal protein S3 gi|71916771|gb|AAZ56673.1| SSU ribosomal protein S3P [Thermobifida fusca YX] Length = 270 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 103/206 (50%), Positives = 147/206 (71%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRWFA Y + ED+ IR+ L +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWFAD-KLYKDYVKEDVAIRQMLTRGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ V++ARPG++IG++G + ++IR L +TN ++ L++ EV PEI+A L+AQ + Sbjct: 60 RERVRVDVHTARPGIVIGRRGAEADRIRANLEKLTNKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVAFRRAMRKAIQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYG A T +G G+KV++ + Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGE 205 >gi|29374857|ref|NP_814010.1| 30S ribosomal protein S3 [Enterococcus faecalis V583] gi|227519998|ref|ZP_03950047.1| 30S ribosomal protein S3 [Enterococcus faecalis TX0104] gi|227555859|ref|ZP_03985906.1| 30S ribosomal protein S3 [Enterococcus faecalis HH22] gi|229546958|ref|ZP_04435683.1| 30S ribosomal protein S3 [Enterococcus faecalis TX1322] gi|229550547|ref|ZP_04439272.1| 30S ribosomal protein S3 [Enterococcus faecalis ATCC 29200] gi|255971715|ref|ZP_05422301.1| ribosomal protein S3 [Enterococcus faecalis T1] gi|255974715|ref|ZP_05425301.1| ribosomal protein S3 [Enterococcus faecalis T2] gi|256762010|ref|ZP_05502590.1| ribosomal protein S3 [Enterococcus faecalis T3] gi|256855169|ref|ZP_05560530.1| ribosomal protein S3 [Enterococcus faecalis T8] gi|256956856|ref|ZP_05561027.1| ribosomal protein S3 [Enterococcus faecalis DS5] gi|256960663|ref|ZP_05564834.1| 30S ribosomal protein S3 [Enterococcus faecalis Merz96] gi|256964138|ref|ZP_05568309.1| 30S ribosomal protein S3 [Enterococcus faecalis HIP11704] gi|257078526|ref|ZP_05572887.1| 30S ribosomal protein S3 [Enterococcus faecalis JH1] gi|257081503|ref|ZP_05575864.1| ribosomal protein S3 [Enterococcus faecalis E1Sol] gi|257084151|ref|ZP_05578512.1| 30S ribosomal protein S3 [Enterococcus faecalis Fly1] gi|257087978|ref|ZP_05582339.1| ribosomal protein S3 [Enterococcus faecalis D6] gi|257088655|ref|ZP_05583016.1| 30S ribosomal protein S3 [Enterococcus faecalis CH188] gi|257417582|ref|ZP_05594576.1| ribosomal protein S3 [Enterococcus faecalis AR01/DG] gi|257418693|ref|ZP_05595687.1| 30S ribosomal protein S3 [Enterococcus faecalis T11] gi|257421506|ref|ZP_05598496.1| 30S ribosomal protein S3 [Enterococcus faecalis X98] gi|293382752|ref|ZP_06628677.1| ribosomal protein S3 [Enterococcus faecalis R712] gi|293388065|ref|ZP_06632593.1| ribosomal protein S3 [Enterococcus faecalis S613] gi|294781057|ref|ZP_06746408.1| ribosomal protein S3 [Enterococcus faecalis PC1.1] gi|300861815|ref|ZP_07107895.1| ribosomal protein S3 [Enterococcus faecalis TUSoD Ef11] gi|307269093|ref|ZP_07550454.1| ribosomal protein S3 [Enterococcus faecalis TX4248] gi|307274177|ref|ZP_07555385.1| ribosomal protein S3 [Enterococcus faecalis TX0855] gi|307276402|ref|ZP_07557525.1| ribosomal protein S3 [Enterococcus faecalis TX2134] gi|307278612|ref|ZP_07559682.1| ribosomal protein S3 [Enterococcus faecalis TX0860] gi|307287008|ref|ZP_07567083.1| ribosomal protein S3 [Enterococcus faecalis TX0109] gi|307291651|ref|ZP_07571526.1| ribosomal protein S3 [Enterococcus faecalis TX0411] gi|312901116|ref|ZP_07760404.1| ribosomal protein S3 [Enterococcus faecalis TX0470] gi|312904678|ref|ZP_07763833.1| ribosomal protein S3 [Enterococcus faecalis TX0635] gi|312908647|ref|ZP_07767589.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 512] gi|312909205|ref|ZP_07768062.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 516] gi|312952613|ref|ZP_07771477.1| ribosomal protein S3 [Enterococcus faecalis TX0102] gi|61215749|sp|Q839F8|RS3_ENTFA RecName: Full=30S ribosomal protein S3 gi|29342315|gb|AAO80081.1| ribosomal protein S3 [Enterococcus faecalis V583] gi|227072546|gb|EEI10509.1| 30S ribosomal protein S3 [Enterococcus faecalis TX0104] gi|227175026|gb|EEI55998.1| 30S ribosomal protein S3 [Enterococcus faecalis HH22] gi|229304266|gb|EEN70262.1| 30S ribosomal protein S3 [Enterococcus faecalis ATCC 29200] gi|229307886|gb|EEN73873.1| 30S ribosomal protein S3 [Enterococcus faecalis TX1322] gi|255962733|gb|EET95209.1| ribosomal protein S3 [Enterococcus faecalis T1] gi|255967587|gb|EET98209.1| ribosomal protein S3 [Enterococcus faecalis T2] gi|256683261|gb|EEU22956.1| ribosomal protein S3 [Enterococcus faecalis T3] gi|256709682|gb|EEU24729.1| ribosomal protein S3 [Enterococcus faecalis T8] gi|256947352|gb|EEU63984.1| ribosomal protein S3 [Enterococcus faecalis DS5] gi|256951159|gb|EEU67791.1| 30S ribosomal protein S3 [Enterococcus faecalis Merz96] gi|256954634|gb|EEU71266.1| 30S ribosomal protein S3 [Enterococcus faecalis HIP11704] gi|256986556|gb|EEU73858.1| 30S ribosomal protein S3 [Enterococcus faecalis JH1] gi|256989533|gb|EEU76835.1| ribosomal protein S3 [Enterococcus faecalis E1Sol] gi|256992181|gb|EEU79483.1| 30S ribosomal protein S3 [Enterococcus faecalis Fly1] gi|256996008|gb|EEU83310.1| ribosomal protein S3 [Enterococcus faecalis D6] gi|256997467|gb|EEU83987.1| 30S ribosomal protein S3 [Enterococcus faecalis CH188] gi|257159410|gb|EEU89370.1| ribosomal protein S3 [Enterococcus faecalis ARO1/DG] gi|257160521|gb|EEU90481.1| 30S ribosomal protein S3 [Enterococcus faecalis T11] gi|257163330|gb|EEU93290.1| 30S ribosomal protein S3 [Enterococcus faecalis X98] gi|291079912|gb|EFE17276.1| ribosomal protein S3 [Enterococcus faecalis R712] gi|291082516|gb|EFE19479.1| ribosomal protein S3 [Enterococcus faecalis S613] gi|294451860|gb|EFG20311.1| ribosomal protein S3 [Enterococcus faecalis PC1.1] gi|300848340|gb|EFK76097.1| ribosomal protein S3 [Enterococcus faecalis TUSoD Ef11] gi|306497270|gb|EFM66812.1| ribosomal protein S3 [Enterococcus faecalis TX0411] gi|306501954|gb|EFM71243.1| ribosomal protein S3 [Enterococcus faecalis TX0109] gi|306504672|gb|EFM73872.1| ribosomal protein S3 [Enterococcus faecalis TX0860] gi|306506882|gb|EFM76029.1| ribosomal protein S3 [Enterococcus faecalis TX2134] gi|306509139|gb|EFM78201.1| ribosomal protein S3 [Enterococcus faecalis TX0855] gi|306514573|gb|EFM83127.1| ribosomal protein S3 [Enterococcus faecalis TX4248] gi|310625434|gb|EFQ08717.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 512] gi|310629401|gb|EFQ12684.1| ribosomal protein S3 [Enterococcus faecalis TX0102] gi|310632030|gb|EFQ15313.1| ribosomal protein S3 [Enterococcus faecalis TX0635] gi|311290447|gb|EFQ69003.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 516] gi|311291788|gb|EFQ70344.1| ribosomal protein S3 [Enterococcus faecalis TX0470] gi|315026829|gb|EFT38761.1| ribosomal protein S3 [Enterococcus faecalis TX2137] gi|315028869|gb|EFT40801.1| ribosomal protein S3 [Enterococcus faecalis TX4000] gi|315031145|gb|EFT43077.1| ribosomal protein S3 [Enterococcus faecalis TX0017] gi|315036009|gb|EFT47941.1| ribosomal protein S3 [Enterococcus faecalis TX0027] gi|315145342|gb|EFT89358.1| ribosomal protein S3 [Enterococcus faecalis TX2141] gi|315147165|gb|EFT91181.1| ribosomal protein S3 [Enterococcus faecalis TX4244] gi|315151077|gb|EFT95093.1| ribosomal protein S3 [Enterococcus faecalis TX0012] gi|315153603|gb|EFT97619.1| ribosomal protein S3 [Enterococcus faecalis TX0031] gi|315156217|gb|EFU00234.1| ribosomal protein S3 [Enterococcus faecalis TX0043] gi|315158638|gb|EFU02655.1| ribosomal protein S3 [Enterococcus faecalis TX0312] gi|315160734|gb|EFU04751.1| ribosomal protein S3 [Enterococcus faecalis TX0645] gi|315165895|gb|EFU09912.1| ribosomal protein S3 [Enterococcus faecalis TX1302] gi|315168106|gb|EFU12123.1| ribosomal protein S3 [Enterococcus faecalis TX1341] gi|315171454|gb|EFU15471.1| ribosomal protein S3 [Enterococcus faecalis TX1342] gi|315172688|gb|EFU16705.1| ribosomal protein S3 [Enterococcus faecalis TX1346] gi|315573520|gb|EFU85711.1| ribosomal protein S3 [Enterococcus faecalis TX0309B] gi|315579332|gb|EFU91523.1| ribosomal protein S3 [Enterococcus faecalis TX0630] gi|315582132|gb|EFU94323.1| ribosomal protein S3 [Enterococcus faecalis TX0309A] gi|323479428|gb|ADX78867.1| ribosomal protein S3 [Enterococcus faecalis 62] gi|327534010|gb|AEA92844.1| 30S ribosomal protein S3 [Enterococcus faecalis OG1RF] gi|329577743|gb|EGG59169.1| ribosomal protein S3 [Enterococcus faecalis TX1467] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFIATKLADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218 >gi|50955560|ref|YP_062848.1| 30S ribosomal protein S3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61215511|sp|Q6AD01|RS3_LEIXX RecName: Full=30S ribosomal protein S3 gi|50952042|gb|AAT89743.1| 30S ribosomal protein S3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 256 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 104/231 (45%), Positives = 151/231 (65%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y L ED+KIR L+ L +AGV++I Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKKGQRYSDYLAEDVKIRTLLKTSLDRAGVSRIE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E+IR L ++ +I L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRADLEKLSGKQIQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +Q A R G+ GV++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQGAQRAGSKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 TLRA+IDYG A+T +G G+KV++ D +++ + A + + + Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWMYKGD-ITNKELARVQANVKPSRERN 230 >gi|300779839|ref|ZP_07089695.1| 30S ribosomal protein S3 [Corynebacterium genitalium ATCC 33030] gi|300533949|gb|EFK55008.1| 30S ribosomal protein S3 [Corynebacterium genitalium ATCC 33030] Length = 249 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 104/221 (47%), Positives = 149/221 (67%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S W+A + Y + ED+KIRE+L +L++AG+A I+IERT Sbjct: 1 MGQKIHPHGLRLGITADWKSHWYAD-NNYADYVAEDIKIREFLNKNLQRAGIADIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + NA L+AQS+ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKNVDANAALVAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+K+ SGRL GAE+SR E Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKIQCSGRLGGAEMSRVERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A AET +G G+KV++ D V + A Sbjct: 180 AEIDYGLAEAETTFGIIGVKVWIYKGDVVGGVRESELNAPK 220 >gi|269128510|ref|YP_003301880.1| 30S ribosomal protein S3 [Thermomonospora curvata DSM 43183] gi|268313468|gb|ACY99842.1| ribosomal protein S3 [Thermomonospora curvata DSM 43183] Length = 272 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 102/206 (49%), Positives = 145/206 (70%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ + SRW+A Y + ED+ IR LQ +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLQKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G+KV SGRL GAE+SR+E Y EG+VPL TLRA Sbjct: 120 AEQLSSRVAFRRAMRKAIQSAMKSGAKGIKVQCSGRLGGAEMSRSEFYREGQVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGD 205 >gi|262370572|ref|ZP_06063897.1| ribosomal protein S3 [Acinetobacter johnsonii SH046] gi|262314372|gb|EEY95414.1| ribosomal protein S3 [Acinetobacter johnsonii SH046] Length = 250 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 111/228 (48%), Positives = 158/228 (69%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ + +ARPG++IGKKG DIEK++++L+ + +S+NE+ +P+++A L+A++I Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTQIMGIPAQVSINEIDRPDLDARLVAEAI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226 IDY T AET YG+ G+KV++ + + PA AE R ++ Sbjct: 181 DIDYSTMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228 >gi|300814655|ref|ZP_07094906.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511274|gb|EFK38523.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 260 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 148/214 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + LL ED +IR+Y++ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKNWDSKWYANKKNFSELLVEDNEIRKYIKKKLYAAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+A+PG++IG+ G +E++RK++ +T I L+V EV P+++A L+++SI Sbjct: 61 ANRVKVSIYTAKPGVVIGRGGAGVEELRKEVEKLTGKSIVLNVEEVKNPDVDAQLVSESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERRV FRRAMK+A+Q MR GA G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 121 AEALERRVSFRRAMKQAIQRTMRAGALGIKTAVAGRLGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG + A+T YG G+KV++ + + + Sbjct: 181 DIDYGFSEADTTYGKLGVKVWLYKGEILPEFKEE 214 >gi|91200673|emb|CAJ73724.1| strongly similar to 30S ribosomal protein S3 [Candidatus Kuenenia stuttgartiensis] Length = 219 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 91/205 (44%), Positives = 139/205 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ PI FRLG+ W S W+A +G+LL ED KIR+ ++ + G+ + IERT Sbjct: 1 MGQKVCPIGFRLGITQGWKSVWYADKKSFGSLLVEDFKIRKLIKKNYGFGGIPFVEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +I +++ARPGLIIG+KG +++K++ +L + + + E+ KPE A L+++++ Sbjct: 61 RQEAKITLHTARPGLIIGRKGAEVDKLKDELQKYIGRVVVVKIKEINKPETYAQLVSENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR FRRAMK+A+++++ G G+++ SGRL GAE++RTE G VPL TLRA Sbjct: 121 AEQLERRASFRRAMKKAMEASLNAGVKGMRIQVSGRLGGAEIARTEKITHGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 IDYG A A+T YG G+KV++ Sbjct: 181 DIDYGFAEAKTTYGVIGVKVWLYKG 205 >gi|168181870|ref|ZP_02616534.1| 30S ribosomal protein S3 [Clostridium botulinum Bf] gi|237796936|ref|YP_002864488.1| 30S ribosomal protein S3 [Clostridium botulinum Ba4 str. 657] gi|259495238|sp|C3KVP5|RS3_CLOB6 RecName: Full=30S ribosomal protein S3 gi|182674930|gb|EDT86891.1| 30S ribosomal protein S3 [Clostridium botulinum Bf] gi|229263325|gb|ACQ54358.1| 30S ribosomal protein S3 [Clostridium botulinum Ba4 str. 657] Length = 223 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ +L + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNQLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|227487117|ref|ZP_03917433.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541716|ref|ZP_03971765.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092775|gb|EEI28087.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182531|gb|EEI63503.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC 51866] Length = 250 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 102/221 (46%), Positives = 147/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + W+A Y + ED+KIRE+L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWYADKKTYSEYVAEDIKIREFLDKGLDRAGIADVVIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI Sbjct: 61 RDRVRVDIHTARPGIVIGRRGSEADRIRGELEKLTGKQVALNIIEVKNIDANAQLVAQSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ +GRL GAE+SR E Y EGRVPL TLR Sbjct: 121 AEQLSNRVAFRRAMRKAIQSAMRQPQVKGIKVVCAGRLGGAEMSRVERYHEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYGT A T +G G+KV++ D V + A Sbjct: 181 AEIDYGTFEAHTTFGRIGVKVWIYKGDVVGGRRESELNAPE 221 >gi|184200268|ref|YP_001854475.1| 30S ribosomal protein S3 [Kocuria rhizophila DC2201] gi|226697723|sp|B2GIZ9|RS3_KOCRD RecName: Full=30S ribosomal protein S3 gi|183580498|dbj|BAG28969.1| 30S ribosomal protein S3 [Kocuria rhizophila DC2201] Length = 277 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ S W+A ++ Y + ED+KIRE + + +AG++K+ Sbjct: 1 MGQKINPNGFRLGITTDHVSHWYADSNQPGQRYKDYIREDVKIRELMSKGMDRAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV PEI+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPEIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAMK+A+QSA R GA G+++ +GRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLASRVAFRRAMKKAIQSAQRAGAKGIRIQCAGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA+IDYG A+T +G G+KV++ D Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD 210 >gi|319945829|ref|ZP_08020079.1| 30S ribosomal protein S3 [Streptococcus australis ATCC 700641] gi|319747894|gb|EFW00138.1| 30S ribosomal protein S3 [Streptococcus australis ATCC 700641] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 143/215 (66%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKDAK 214 >gi|257784957|ref|YP_003180174.1| 30S ribosomal protein S3 [Atopobium parvulum DSM 20469] gi|257473464|gb|ACV51583.1| ribosomal protein S3 [Atopobium parvulum DSM 20469] Length = 236 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLGV +W SRW+A +Y L DL IR+YL+ L++A VA+I IER Sbjct: 1 MGQKVQPTGFRLGVTESWRSRWYAD-KDYAEQLGNDLAIRKYLEKRLEKAAVARIDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 ++ ++SARPG++IGKKG +I ++++ + ++++ V EV +PE++A L+A Sbjct: 60 GDKVKVTIFSARPGIVIGKKGAEIDGLRADLERVAKVGKGQVNVDVVEVKRPELDANLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QSIA+QLE+RV FRRAM++AVQSA + GA G+++ SGRLNGAE+ R E Y EGRVPL T Sbjct: 120 QSIAEQLEQRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLNGAEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA I YGTA T G+ GIKV++ +++ + PA E Sbjct: 180 LRAAIGYGTATGRTTMGAVGIKVWIYFGEKMPGQPTPNPALE 221 >gi|269468081|gb|EEZ79795.1| ribosomal protein S3 [uncultured SUP05 cluster bacterium] Length = 230 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 153/221 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W+S+W+A +Y L D+++R++L LK A V++I IER Sbjct: 1 MGQKVNPKGIRLGIIRDWDSKWYANSQDYSKYLLSDIEVRDFLFEKLKSASVSRITIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N ++ +++ARPG++IGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I Sbjct: 61 ANNAKVTIHTARPGIVIGKKGADIEQLKAIVSKMMGITVHINIEEIKKPELDARLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV++RRA+KR + +A R GA G+KV+ SGRLNGAE++R+E Y EGRVPL T RA Sbjct: 121 AQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVSGRLNGAEIARSEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +DY + A T YG GIKV++ + + T+ R Sbjct: 181 DVDYSSYGANTQYGVIGIKVWIFKGEILDHKKGTLDEVARR 221 >gi|195977214|ref|YP_002122458.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867671|ref|YP_002743619.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus] gi|225869542|ref|YP_002745489.1| 30S ribosomal protein S3 [Streptococcus equi subsp. equi 4047] gi|226697761|sp|B4U506|RS3_STREM RecName: Full=30S ribosomal protein S3 gi|254764546|sp|C0M8D5|RS3_STRE4 RecName: Full=30S ribosomal protein S3 gi|259495258|sp|C0MCB6|RS3_STRS7 RecName: Full=30S ribosomal protein S3 gi|195973919|gb|ACG61445.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225698946|emb|CAW91978.1| 30S ribosomal protein S3 [Streptococcus equi subsp. equi 4047] gi|225700947|emb|CAW97656.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|170760894|ref|YP_001788815.1| 30S ribosomal protein S3 [Clostridium botulinum A3 str. Loch Maree] gi|226950927|ref|YP_002806018.1| 30S ribosomal protein S3 [Clostridium botulinum A2 str. Kyoto] gi|226697688|sp|B1KSL9|RS3_CLOBM RecName: Full=30S ribosomal protein S3 gi|254764523|sp|C1FMU5|RS3_CLOBJ RecName: Full=30S ribosomal protein S3 gi|169407883|gb|ACA56294.1| 30S ribosomal protein S3 [Clostridium botulinum A3 str. Loch Maree] gi|226842155|gb|ACO84821.1| ribosomal protein S3 [Clostridium botulinum A2 str. Kyoto] Length = 223 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|307720142|ref|YP_003891282.1| 30S ribosomal protein S3P [Sulfurimonas autotrophica DSM 16294] gi|306978235|gb|ADN08270.1| SSU ribosomal protein S3P [Sulfurimonas autotrophica DSM 16294] Length = 238 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF A L ED KIR +L+ L AGV+ I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPNFKTAPAALGEDHKIRTFLKKELYYAGVSNIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG DIEK++ + + + +++ E K + +A L+A+++ Sbjct: 61 VKRLRVTIVAARPGIIIGKKGADIEKLKTAVQKLVGKTVSINIKEEKKAQTSAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A R GA G+KV +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVMQGAQRSGAKGIKVAVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G+KV++ + EV A E + + Sbjct: 181 KIDYGFAEAHTTYGIIGVKVWIF-KGEVLTKGIPAEAKEEKKERRG 225 >gi|227530211|ref|ZP_03960260.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540] gi|227349886|gb|EEJ40177.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540] Length = 219 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 145/220 (65%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAE-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A T YG G+K ++ + + + Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNNDEEGGK 219 >gi|15900151|ref|NP_344755.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TIGR4] gi|15902239|ref|NP_357789.1| 30S ribosomal protein S3 [Streptococcus pneumoniae R6] gi|111658795|ref|ZP_01409426.1| hypothetical protein SpneT_02000092 [Streptococcus pneumoniae TIGR4] gi|116515402|ref|YP_815718.1| 30S ribosomal protein S3 [Streptococcus pneumoniae D39] gi|148983614|ref|ZP_01816933.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP3-BS71] gi|148987952|ref|ZP_01819415.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP6-BS73] gi|148992792|ref|ZP_01822435.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP9-BS68] gi|148996637|ref|ZP_01824355.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP11-BS70] gi|149001679|ref|ZP_01826652.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS69] gi|149005965|ref|ZP_01829694.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP18-BS74] gi|149011084|ref|ZP_01832389.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP19-BS75] gi|149017904|ref|ZP_01834363.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP23-BS72] gi|168483851|ref|ZP_02708803.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1873-00] gi|168486019|ref|ZP_02710527.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1087-00] gi|168489692|ref|ZP_02713891.1| ribosomal protein S3 [Streptococcus pneumoniae SP195] gi|168492168|ref|ZP_02716311.1| ribosomal protein S3 [Streptococcus pneumoniae CDC0288-04] gi|168493908|ref|ZP_02718051.1| ribosomal protein S3 [Streptococcus pneumoniae CDC3059-06] gi|168576358|ref|ZP_02722241.1| ribosomal protein S3 [Streptococcus pneumoniae MLV-016] gi|169834372|ref|YP_001693747.1| 30S ribosomal protein S3 [Streptococcus pneumoniae Hungary19A-6] gi|182683194|ref|YP_001834941.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CGSP14] gi|194398748|ref|YP_002036916.1| 30S ribosomal protein S3 [Streptococcus pneumoniae G54] gi|221231119|ref|YP_002510271.1| 30S ribosomal protein S3 [Streptococcus pneumoniae ATCC 700669] gi|225853821|ref|YP_002735333.1| 30S ribosomal protein S3 [Streptococcus pneumoniae JJA] gi|225855980|ref|YP_002737491.1| 30S ribosomal protein S3 [Streptococcus pneumoniae P1031] gi|225858069|ref|YP_002739579.1| 30S ribosomal protein S3 [Streptococcus pneumoniae 70585] gi|225860257|ref|YP_002741766.1| 30S ribosomal protein S3 [Streptococcus pneumoniae Taiwan19F-14] gi|237649717|ref|ZP_04523969.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CCRI 1974] gi|237821415|ref|ZP_04597260.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CCRI 1974M2] gi|270292006|ref|ZP_06198221.1| ribosomal protein S3 [Streptococcus sp. M143] gi|293364341|ref|ZP_06611067.1| 30S ribosomal protein S3 [Streptococcus oralis ATCC 35037] gi|298230372|ref|ZP_06964053.1| 30S ribosomal protein S3 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255993|ref|ZP_06979579.1| 30S ribosomal protein S3 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502029|ref|YP_003723969.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TCH8431/19A] gi|303255089|ref|ZP_07341165.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS455] gi|303259267|ref|ZP_07345245.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP-BS293] gi|303261022|ref|ZP_07346971.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS292] gi|303263350|ref|ZP_07349273.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS397] gi|303265515|ref|ZP_07351415.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS457] gi|303267927|ref|ZP_07353729.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS458] gi|306825980|ref|ZP_07459316.1| 30S ribosomal protein S3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828789|ref|ZP_07461981.1| 30S ribosomal protein S3 [Streptococcus mitis ATCC 6249] gi|307066893|ref|YP_003875859.1| hypothetical protein SPAP_0264 [Streptococcus pneumoniae AP200] gi|307126435|ref|YP_003878466.1| 30S ribosomal protein S3 [Streptococcus pneumoniae 670-6B] gi|307702692|ref|ZP_07639644.1| ribosomal protein S3 [Streptococcus oralis ATCC 35037] gi|307704071|ref|ZP_07641000.1| ribosomal protein S3 [Streptococcus mitis SK597] gi|307708066|ref|ZP_07644534.1| ribosomal protein S3 [Streptococcus mitis NCTC 12261] gi|307709916|ref|ZP_07646363.1| ribosomal protein S3 [Streptococcus mitis SK564] gi|307711049|ref|ZP_07647471.1| ribosomal protein S3 [Streptococcus mitis SK321] gi|309799064|ref|ZP_07693317.1| ribosomal protein S3 [Streptococcus infantis SK1302] gi|315612338|ref|ZP_07887251.1| 30S ribosomal protein S3 [Streptococcus sanguinis ATCC 49296] gi|322377224|ref|ZP_08051716.1| ribosomal protein S3 [Streptococcus sp. M334] gi|322388395|ref|ZP_08061998.1| 30S ribosomal protein S3 [Streptococcus infantis ATCC 700779] gi|322391205|ref|ZP_08064677.1| 30S ribosomal protein S3 [Streptococcus peroris ATCC 700780] gi|331267130|ref|YP_004326760.1| 30S ribosomal protein S3 [Streptococcus oralis Uo5] gi|61236203|sp|P0A4C3|RS3_STRPN RecName: Full=30S ribosomal protein S3 gi|61236210|sp|P0A4C4|RS3_STRR6 RecName: Full=30S ribosomal protein S3 gi|122279396|sp|Q04MN0|RS3_STRP2 RecName: Full=30S ribosomal protein S3 gi|226697763|sp|B5E6G1|RS3_STRP4 RecName: Full=30S ribosomal protein S3 gi|226697764|sp|B1I8K4|RS3_STRPI RecName: Full=30S ribosomal protein S3 gi|226697765|sp|B2IS46|RS3_STRPS RecName: Full=30S ribosomal protein S3 gi|254764547|sp|C1CAL8|RS3_STRP7 RecName: Full=30S ribosomal protein S3 gi|254764548|sp|B8ZKG3|RS3_STRPJ RecName: Full=30S ribosomal protein S3 gi|254764550|sp|C1CC12|RS3_STRZJ RecName: Full=30S ribosomal protein S3 gi|254764551|sp|C1CIA3|RS3_STRZP RecName: Full=30S ribosomal protein S3 gi|254764552|sp|C1CP94|RS3_STRZT RecName: Full=30S ribosomal protein S3 gi|14971683|gb|AAK74395.1| ribosomal protein S3 [Streptococcus pneumoniae TIGR4] gi|15457740|gb|AAK98999.1| 30S Ribosomal protein S3 [Streptococcus pneumoniae R6] gi|116075978|gb|ABJ53698.1| ribosomal protein S3 [Streptococcus pneumoniae D39] gi|147757212|gb|EDK64251.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP11-BS70] gi|147760137|gb|EDK67126.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS69] gi|147762321|gb|EDK69282.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP18-BS74] gi|147764720|gb|EDK71650.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP19-BS75] gi|147923761|gb|EDK74873.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP3-BS71] gi|147926416|gb|EDK77489.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP6-BS73] gi|147928518|gb|EDK79533.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP9-BS68] gi|147931468|gb|EDK82446.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP23-BS72] gi|168996874|gb|ACA37486.1| ribosomal protein S3 [Streptococcus pneumoniae Hungary19A-6] gi|172042832|gb|EDT50878.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1873-00] gi|182628528|gb|ACB89476.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CGSP14] gi|183570863|gb|EDT91391.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1087-00] gi|183571808|gb|EDT92336.1| ribosomal protein S3 [Streptococcus pneumoniae SP195] gi|183573590|gb|EDT94118.1| ribosomal protein S3 [Streptococcus pneumoniae CDC0288-04] gi|183576103|gb|EDT96631.1| ribosomal protein S3 [Streptococcus pneumoniae CDC3059-06] gi|183577793|gb|EDT98321.1| ribosomal protein S3 [Streptococcus pneumoniae MLV-016] gi|194358415|gb|ACF56863.1| 30S ribosomal protein S3 [Streptococcus pneumoniae G54] gi|220673579|emb|CAR68065.1| 30S ribosomal protein S3 [Streptococcus pneumoniae ATCC 700669] gi|225720919|gb|ACO16773.1| ribosomal protein S3 [Streptococcus pneumoniae 70585] gi|225722244|gb|ACO18097.1| ribosomal protein S3 [Streptococcus pneumoniae JJA] gi|225725911|gb|ACO21763.1| ribosomal protein S3 [Streptococcus pneumoniae P1031] gi|225728266|gb|ACO24117.1| ribosomal protein S3 [Streptococcus pneumoniae Taiwan19F-14] gi|270279534|gb|EFA25376.1| ribosomal protein S3 [Streptococcus sp. M143] gi|291317187|gb|EFE57614.1| 30S ribosomal protein S3 [Streptococcus oralis ATCC 35037] gi|298237624|gb|ADI68755.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TCH8431/19A] gi|301793488|emb|CBW35861.1| 30S ribosomal protein S3 [Streptococcus pneumoniae INV104] gi|301799364|emb|CBW31899.1| 30S ribosomal protein S3 [Streptococcus pneumoniae OXC141] gi|301801159|emb|CBW33832.1| 30S ribosomal protein S3 [Streptococcus pneumoniae INV200] gi|302597919|gb|EFL64989.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS455] gi|302637859|gb|EFL68345.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS292] gi|302639685|gb|EFL70142.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP-BS293] gi|302642623|gb|EFL72968.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS458] gi|302644955|gb|EFL75202.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS457] gi|302647123|gb|EFL77347.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS397] gi|304428967|gb|EFM32055.1| 30S ribosomal protein S3 [Streptococcus mitis ATCC 6249] gi|304431696|gb|EFM34676.1| 30S ribosomal protein S3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408430|gb|ADM83857.1| hypothetical protein SPAP_0264 [Streptococcus pneumoniae AP200] gi|306483497|gb|ADM90366.1| ribosomal protein S3 [Streptococcus pneumoniae 670-6B] gi|307615851|gb|EFN95056.1| ribosomal protein S3 [Streptococcus mitis NCTC 12261] gi|307617011|gb|EFN96189.1| ribosomal protein S3 [Streptococcus mitis SK321] gi|307619287|gb|EFN98416.1| ribosomal protein S3 [Streptococcus mitis SK564] gi|307622361|gb|EFO01369.1| ribosomal protein S3 [Streptococcus mitis SK597] gi|307623808|gb|EFO02793.1| ribosomal protein S3 [Streptococcus oralis ATCC 35037] gi|308117299|gb|EFO54722.1| ribosomal protein S3 [Streptococcus infantis SK1302] gi|315315319|gb|EFU63358.1| 30S ribosomal protein S3 [Streptococcus sanguinis ATCC 49296] gi|321140708|gb|EFX36210.1| 30S ribosomal protein S3 [Streptococcus infantis ATCC 700779] gi|321145958|gb|EFX41347.1| 30S ribosomal protein S3 [Streptococcus peroris ATCC 700780] gi|321281937|gb|EFX58945.1| ribosomal protein S3 [Streptococcus sp. M334] gi|326683802|emb|CBZ01420.1| 30S ribosomal protein S3 [Streptococcus oralis Uo5] gi|327390634|gb|EGE88974.1| ribosomal protein S3 [Streptococcus pneumoniae GA04375] gi|332075880|gb|EGI86347.1| ribosomal protein S3 [Streptococcus pneumoniae GA17570] gi|332076661|gb|EGI87123.1| ribosomal protein S3 [Streptococcus pneumoniae GA17545] gi|332077516|gb|EGI87977.1| ribosomal protein S3 [Streptococcus pneumoniae GA41301] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|154507858|ref|ZP_02043500.1| hypothetical protein ACTODO_00340 [Actinomyces odontolyticus ATCC 17982] gi|153797492|gb|EDN79912.1| hypothetical protein ACTODO_00340 [Actinomyces odontolyticus ATCC 17982] Length = 269 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++ Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLRA+IDYG A T +G G+KV++ D +++ + AE Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQAQ 225 >gi|313897172|ref|ZP_07830716.1| ribosomal protein S3 [Clostridium sp. HGF2] gi|312957893|gb|EFR39517.1| ribosomal protein S3 [Clostridium sp. HGF2] Length = 263 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L K A V+++ IER+ Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAECKNASVSRVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I++ +ARPG+IIG G ++E ++KK+ +T I+L V E+ P+++A L+A+S Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENVEMLKKKVEKLTGGKNIYLKVLEIANPDLDAKLVARS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDY A T YG G+KV++ + + P A Sbjct: 180 ADIDYAWEEASTTYGRLGVKVWICRGEVLPGQMVQEPEAPK 220 >gi|296313371|ref|ZP_06863312.1| ribosomal protein S3 [Neisseria polysaccharea ATCC 43768] gi|296840082|gb|EFH24020.1| ribosomal protein S3 [Neisseria polysaccharea ATCC 43768] Length = 230 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 160/227 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DY T+ A T YG G+KV+V + S + + + +++ Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227 >gi|225016279|ref|ZP_03705471.1| hypothetical protein CLOSTMETH_00182 [Clostridium methylpentosum DSM 5476] gi|224950954|gb|EEG32163.1| hypothetical protein CLOSTMETH_00182 [Clostridium methylpentosum DSM 5476] Length = 236 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 153/220 (69%), Gaps = 4/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA S +G +L ED +R++++ +L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAGKSTFGDILVEDYNLRKFIKKNLFAAGISKIEIERD 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 +I ++ A+PG++IG+ G +IEK++ K+ + +++++ EV P++NA L+A++ Sbjct: 61 AAGRTKIHIHCAKPGIVIGRGGAEIEKLKAKIEKLIGKPVNINIVEVRTPDLNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLERR+ FRRAMK+++ M+ GA G+K+ +GRLNGAE++R+E Y EG +PLQTLR Sbjct: 121 IAAQLERRIAFRRAMKQSIGRTMKLGAKGIKIRVAGRLNGAEIARSESYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV++ + + +PA E Sbjct: 181 ADIDYGFAEADTTYGRIGVKVWIYKGEVLKGE---VPAEE 217 >gi|167759856|ref|ZP_02431983.1| hypothetical protein CLOSCI_02219 [Clostridium scindens ATCC 35704] gi|167662475|gb|EDS06605.1| hypothetical protein CLOSCI_02219 [Clostridium scindens ATCC 35704] Length = 218 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+S+W+A ++ L ED +IR YL+ L AGV++I IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYAE-KDFADYLVEDHEIRTYLKKRLYSAGVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKGELVRFTDKKLVVDIKEVKRPDKEAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPEK 210 >gi|329768279|ref|ZP_08259780.1| 30S ribosomal protein S3 [Gemella haemolysans M341] gi|328837478|gb|EGF87107.1| 30S ribosomal protein S3 [Gemella haemolysans M341] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 149/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I Sbjct: 60 DKRVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV+++ + + S Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214 >gi|229917352|ref|YP_002885998.1| ribosomal protein S3 [Exiguobacterium sp. AT1b] gi|259495247|sp|C4KZP0|RS3_EXISA RecName: Full=30S ribosomal protein S3 gi|229468781|gb|ACQ70553.1| ribosomal protein S3 [Exiguobacterium sp. AT1b] Length = 219 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +Y LLHED IREY++ +K A V+K+ IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-KDYADLLHEDFVIREYIENKMKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 I +++A+PG++IGK G++IE +RK ++ + +H++V EV + A L+A++ Sbjct: 60 ANRVNISLHTAKPGMVIGKGGSEIESLRKHITKIADGKRVHINVVEVKNADAVAKLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE RV FRRAMK+++Q +MR G G+K SGRL GA+++R+E Y EG VPL TLR Sbjct: 120 IARQLEGRVSFRRAMKQSIQRSMRTGIKGIKTEVSGRLGGADIARSEKYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYGTA A+T YG G+KV++ + + ++T AE Sbjct: 180 ADIDYGTAEADTTYGKIGVKVWLYHGEVLPTKNNTAKNAE 219 >gi|319948717|ref|ZP_08022838.1| 30S ribosomal protein S3 [Dietzia cinnamea P4] gi|319437619|gb|EFV92618.1| 30S ribosomal protein S3 [Dietzia cinnamea P4] Length = 272 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 148/220 (67%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG+ W S+WFA +Y + ED+KIR+ L +++AG++ + I RT Sbjct: 1 MGQKIHPHGFRLGITSDWTSKWFAD-KQYADYVSEDIKIRQLLSKGMERAGISGVDISRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPG++IG++G + +++R +L +T ++HL++ E+ E +A L+AQ I Sbjct: 60 RDRVHVDIHTARPGIVIGRRGAEADRLRGELEKLTGKQVHLNILEIKNTEADAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++ +QSAM + G+KV+ SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKGIQSAMRQPQVKGIKVVCSGRLGGAEMSRSERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYGT A+T +G G+KV++ D V + A+ Sbjct: 180 AEIDYGTYEAKTTFGRIGVKVWIYKGDVVGGRRESDQYAQ 219 >gi|116748996|ref|YP_845683.1| 30S ribosomal protein S3 [Syntrophobacter fumaroxidans MPOB] gi|116698060|gb|ABK17248.1| SSU ribosomal protein S3P [Syntrophobacter fumaroxidans MPOB] Length = 233 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 153/208 (73%), Gaps = 1/208 (0%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK++P FRLG+ +W+SRWFA +Y L+HED KIR+Y++ L AG+AK+ IER Sbjct: 27 GQKVHPTGFRLGILKSWDSRWFA-TKDYAKLVHEDRKIRDYIKARLYHAGIAKVEIERAA 85 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 +I +++ARPG++IGKKG +IE +R+ L EI + + EV +PE++ATL+ ++I+ Sbjct: 86 NKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENIS 145 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 QL RRV FRRAMKRAV +A++FGA GV+V ++GRL GAE++R E Y EGRVPL TLRA Sbjct: 146 LQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRAD 205 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYGTA+A T YG+ G+KV++ + + Sbjct: 206 IDYGTAIARTTYGAIGVKVWIFKGEVLP 233 >gi|238922836|ref|YP_002936349.1| SSU ribosomal protein S3P [Eubacterium rectale ATCC 33656] gi|259495246|sp|C4ZBS5|RS3_EUBR3 RecName: Full=30S ribosomal protein S3 gi|238874508|gb|ACR74215.1| SSU ribosomal protein S3P [Eubacterium rectale ATCC 33656] gi|291523738|emb|CBK89325.1| SSU ribosomal protein S3P [Eubacterium rectale DSM 17629] gi|291528796|emb|CBK94382.1| SSU ribosomal protein S3P [Eubacterium rectale M104/1] Length = 218 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A G ++ L ED IR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEG-DFADYLVEDYNIRTFLKKKLYAAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G +IEKI+ ++ +T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKAEVQKLTDKKLVVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + AM+ G G+K SGRL GA+++RTE Y +G PLQT+RA Sbjct: 120 ALQLENRVSFRRAMKSCMGRAMKAGVKGIKTTCSGRLGGADMARTETYNDGTTPLQTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|220913426|ref|YP_002488735.1| ribosomal protein S3 [Arthrobacter chlorophenolicus A6] gi|254764511|sp|B8HD00|RS3_ARTCA RecName: Full=30S ribosomal protein S3 gi|219860304|gb|ACL40646.1| ribosomal protein S3 [Arthrobacter chlorophenolicus A6] Length = 276 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 103/234 (44%), Positives = 154/234 (65%), Gaps = 8/234 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKSGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A+T +G G+KV++ D E++ ++ P+ R Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAAQAASAPSRGPRSDRGG 234 >gi|148244335|ref|YP_001219029.1| 30S ribosomal protein S3 [Candidatus Vesicomyosocius okutanii HA] gi|189045345|sp|A5CXL0|RS3_VESOH RecName: Full=30S ribosomal protein S3 gi|146326162|dbj|BAF61305.1| 30S ribosomal protein S3 [Candidatus Vesicomyosocius okutanii HA] Length = 230 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 102/221 (46%), Positives = 152/221 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W+S+W+A +Y L D+K+R YL L A V+++ I R Sbjct: 1 MGQKVNPKGIRLGIIKDWDSKWYASSKDYSKYLLSDIKVRNYLFKKLINASVSRVQIGRL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N ++ +Y+ARPG++IGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I Sbjct: 61 VNNAKVTIYTARPGIVIGKKGADIEQLKLIVSKMMGIPVHINIEEIKKPELDARLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV++RRA+KR + +A R GA G+KV+ SGRLNGAE++R+E Y EGRVPL T RA Sbjct: 121 AQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVSGRLNGAEIARSEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +DY + A+T YG GIKV++ + + T+ HR Sbjct: 181 DVDYSSYGAKTQYGVIGIKVWIFKGEILDHKKGTLDEVAHR 221 >gi|38233091|ref|NP_938858.1| 30S ribosomal protein S3 [Corynebacterium diphtheriae NCTC 13129] gi|61215598|sp|Q6NJC9|RS3_CORDI RecName: Full=30S ribosomal protein S3 gi|38199350|emb|CAE48985.1| 30S ribosomal protein S3 [Corynebacterium diphtheriae] Length = 248 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 103/222 (46%), Positives = 147/222 (66%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S W+A Y L ED+++REYL L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-KNYAEYLAEDIRVREYLVKTLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ +++ARPG++IG++G++ +++R L +T ++ L++ EV + NA L+AQSI Sbjct: 60 RERVRVDIHTARPGIVIGRRGSEADRLRTSLEKLTGKQVALNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYGT A T +G G+KV++ D V + A Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAE 221 >gi|251781521|ref|YP_002995822.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390149|dbj|BAH80608.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126317|gb|ADX23614.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 217 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|168178838|ref|ZP_02613502.1| ribosomal protein S3 [Clostridium botulinum NCTC 2916] gi|182669980|gb|EDT81956.1| ribosomal protein S3 [Clostridium botulinum NCTC 2916] Length = 223 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++ Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQRIVSNKNILINIVEVKRPEADAQLIAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220 >gi|229815769|ref|ZP_04446094.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM 13280] gi|229808685|gb|EEP44462.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM 13280] Length = 236 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 150/222 (67%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRWFA +Y L D++IR +L+ L +A V+++ IER Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDIEIRRFLEKRLARAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 ++I+ +ARPG++IGKKG++I+ +R +L + + + + V EV +PE++A L+A Sbjct: 60 GDKVKVIILTARPGVVIGKKGSEIDGLRTELEKVAGVSKGNLSVDVIEVKRPELDAVLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA IDYGTA A T GSCG+KV++ +++ A E Sbjct: 180 LRAKIDYGTATARTTMGSCGVKVWIYQGEKLPGQPVPNMALE 221 >gi|241889104|ref|ZP_04776408.1| ribosomal protein S3 [Gemella haemolysans ATCC 10379] gi|241864353|gb|EER68731.1| ribosomal protein S3 [Gemella haemolysans ATCC 10379] Length = 217 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 149/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV+++ + + S Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214 >gi|240145872|ref|ZP_04744473.1| ribosomal protein S3 [Roseburia intestinalis L1-82] gi|257202021|gb|EEV00306.1| ribosomal protein S3 [Roseburia intestinalis L1-82] gi|291537920|emb|CBL11031.1| SSU ribosomal protein S3P [Roseburia intestinalis XB6B4] Length = 218 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 97/209 (46%), Positives = 142/209 (67%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADFLVEDYNIRTCLKKKLYAAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKGEVQKFTDKKLVVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRVSFRRAMKSCMGRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208 >gi|90994498|ref|YP_536988.1| ribosomal protein S3 [Porphyra yezoensis] gi|122225817|sp|Q1XDI0|RR3_PORYE RecName: Full=30S ribosomal protein S3, chloroplastic gi|90819062|dbj|BAE92431.1| 30S ribosomal protein S3 [Porphyra yezoensis] gi|116266134|gb|ABJ91305.1| 30S ribosomal protein S3 [Porphyra yezoensis] Length = 230 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 142/226 (62%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FR+G+ S WFA +Y LL ED KIR ++ L A +AKI I R Sbjct: 1 MGQKIHPLGFRIGITQKHRSSWFANSKDYPVLLQEDHKIRSFIHSKLSNASIAKIEINRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 I++ +ARPG+++GK G IE +RK LS + + ++ ++V E+ P+ ATL+A+ Sbjct: 61 VDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEIADPDSEATLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLE+RV FRRA+++AVQ A R GVK+ SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA IDY A T YG G+KV++ + + +S S A + Sbjct: 181 RADIDYCHRQAHTTYGVLGVKVWLFKGEILPESKSLESAYNQETPD 226 >gi|318042558|ref|ZP_07974514.1| 30S ribosomal protein S3 [Synechococcus sp. CB0101] Length = 242 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 141/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ ++I R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYAPSKTYPTLLQEDDRIRKFIHKKYGAAGISDVVIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDTSRQVRINVVEVERVDADAYLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR M+ A+Q A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRVMRMAIQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T VA T YG GIKV+V + + + +P AA R + Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGNKDKVPVGAAPKRRASR 230 >gi|322375033|ref|ZP_08049547.1| ribosomal protein S3 [Streptococcus sp. C300] gi|321280533|gb|EFX57572.1| ribosomal protein S3 [Streptococcus sp. C300] Length = 217 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q A+R GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAIRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|210631088|ref|ZP_03296744.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279] gi|210160176|gb|EEA91147.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279] Length = 236 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 150/222 (67%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRWFA +Y L D++IR +L+ L +A V+++ IER Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDIEIRRFLEKRLARAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 ++I+ +ARPG++IGKKG++I+ +R +L + T + + V EV +PE++A L+A Sbjct: 60 GDKVKVIILTARPGVVIGKKGSEIDGLRTELERVAGVTKGNLSVDVIEVKRPELDAVLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA IDYGTA A T GSCG+KV++ +++ A E Sbjct: 180 LRAKIDYGTATAHTTMGSCGVKVWIYQGEKLPGQPVPNMALE 221 >gi|30248424|ref|NP_840494.1| 30S ribosomal protein S3 [Nitrosomonas europaea ATCC 19718] gi|61215742|sp|Q820R1|RS3_NITEU RecName: Full=30S ribosomal protein S3 gi|30138310|emb|CAD84318.1| Ribosomal protein S3:Type 2 KH domain:KH domain [Nitrosomonas europaea ATCC 19718] Length = 215 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 111/214 (51%), Positives = 156/214 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W+SRW+ ++ L+ED+ +R+YLQ L A V I+IER Sbjct: 1 MGQKINPTGFRLSVLKNWSSRWYTNTKKFSDFLNEDISVRQYLQKKLAHASVGSIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN +I ++++RPG++IGKKG DIE +R+ + + N +H+++ E+ KPEI+A LIA SI Sbjct: 61 SKNAKITIHTSRPGVVIGKKGEDIEILRRNVEKLMNVPVHINIEEIRKPEIDAQLIAASI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLEKRIMFRRAMKRAIQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 +DYGT+ A T YG G+KV+V +++ + Sbjct: 181 EVDYGTSEARTTYGIIGVKVWVFKGEQLGIKERQ 214 >gi|317496184|ref|ZP_07954544.1| ribosomal protein S3 [Gemella moribillum M424] gi|316913759|gb|EFV35245.1| ribosomal protein S3 [Gemella moribillum M424] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A ++ LHED KIRE++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFATNLHEDFKIREFISKQLKDASVSKVEIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV+++ + + S Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTKKSEK 214 >gi|312200014|ref|YP_004020075.1| ribosomal protein S3 [Frankia sp. EuI1c] gi|311231350|gb|ADP84205.1| ribosomal protein S3 [Frankia sp. EuI1c] Length = 314 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 101/227 (44%), Positives = 154/227 (67%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSKGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-DSTIPAAEHRVVEKD 226 IDYG A T +G G+KV++ D V + A R ++ Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDVVQSRAEREAQEALTRQHRRE 226 >gi|15674293|ref|NP_268466.1| 30S ribosomal protein S3 [Streptococcus pyogenes M1 GAS] gi|19745247|ref|NP_606383.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS8232] gi|22536249|ref|NP_687100.1| 30S ribosomal protein S3 [Streptococcus agalactiae 2603V/R] gi|25010139|ref|NP_734534.1| 30S ribosomal protein S3 [Streptococcus agalactiae NEM316] gi|50913445|ref|YP_059417.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10394] gi|71902715|ref|YP_279518.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS6180] gi|71909864|ref|YP_281414.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS5005] gi|76787747|ref|YP_328790.1| 30S ribosomal protein S3 [Streptococcus agalactiae A909] gi|94987681|ref|YP_595782.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS9429] gi|94989561|ref|YP_597661.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10270] gi|94991551|ref|YP_599650.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS2096] gi|94993449|ref|YP_601547.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10750] gi|139472933|ref|YP_001127648.1| 30S ribosomal protein S3 [Streptococcus pyogenes str. Manfredo] gi|161485757|ref|NP_663850.2| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS315] gi|161486359|ref|NP_801310.2| 30S ribosomal protein S3 [Streptococcus pyogenes SSI-1] gi|306828254|ref|ZP_07461514.1| 30S ribosomal protein S3 [Streptococcus pyogenes ATCC 10782] gi|54039505|sp|P66556|RS3_STRP3 RecName: Full=30S ribosomal protein S3 gi|54039506|sp|P66557|RS3_STRP8 RecName: Full=30S ribosomal protein S3 gi|54039507|sp|P66558|RS3_STRA3 RecName: Full=30S ribosomal protein S3 gi|54039508|sp|P66559|RS3_STRA5 RecName: Full=30S ribosomal protein S3 gi|54041961|sp|P66555|RS3_STRP1 RecName: Full=30S ribosomal protein S3 gi|61215416|sp|Q5XEC9|RS3_STRP6 RecName: Full=30S ribosomal protein S3 gi|91207844|sp|Q3K3W3|RS3_STRA1 RecName: Full=30S ribosomal protein S3 gi|91207845|sp|Q48VU3|RS3_STRPM RecName: Full=30S ribosomal protein S3 gi|122986875|sp|Q1J908|RS3_STRPF RecName: Full=30S ribosomal protein S3 gi|122986959|sp|Q1JE52|RS3_STRPB RecName: Full=30S ribosomal protein S3 gi|122987151|sp|Q1JP11|RS3_STRPC RecName: Full=30S ribosomal protein S3 gi|123258075|sp|Q1JJ56|RS3_STRPD RecName: Full=30S ribosomal protein S3 gi|152060908|sp|A2RC20|RS3_STRPG RecName: Full=30S ribosomal protein S3 gi|22533069|gb|AAM98972.1|AE014194_17 ribosomal protein S3 [Streptococcus agalactiae 2603V/R] gi|13621374|gb|AAK33188.1| 30S ribosomal protein S3 [Streptococcus pyogenes M1 GAS] gi|19747341|gb|AAL96882.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS8232] gi|23094490|emb|CAD45709.1| ribosomal protein S3 [Streptococcus agalactiae NEM316] gi|50902519|gb|AAT86234.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10394] gi|71801810|gb|AAX71163.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS6180] gi|71852646|gb|AAZ50669.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS5005] gi|76562804|gb|ABA45388.1| ribosomal protein S3 [Streptococcus agalactiae A909] gi|94541189|gb|ABF31238.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS9429] gi|94543069|gb|ABF33117.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10270] gi|94545059|gb|ABF35106.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS2096] gi|94546957|gb|ABF37003.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10750] gi|134271179|emb|CAM29392.1| 30S ribosomal protein S3 [Streptococcus pyogenes str. Manfredo] gi|304429565|gb|EFM32614.1| 30S ribosomal protein S3 [Streptococcus pyogenes ATCC 10782] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|282882538|ref|ZP_06291159.1| ribosomal protein S3 [Peptoniphilus lacrimalis 315-B] gi|281297680|gb|EFA90155.1| ribosomal protein S3 [Peptoniphilus lacrimalis 315-B] Length = 260 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 99/214 (46%), Positives = 148/214 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + LL ED +IR+Y++ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKNWDSKWYANKKNFSELLVEDNEIRKYIKKKLYVAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+A+PG++IG+ G +E++RK++ +T I L+V EV P+I+A L+++SI Sbjct: 61 ANRVKVSIYTAKPGVVIGRGGAGVEELRKEVEKLTGKSIVLNVEEVKNPDIDAQLVSESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERRV FRRAMK+A+Q MR GA G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 121 AEALERRVSFRRAMKQAIQRTMRAGALGIKTAVAGRLGGADMARTEGYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG + A+T YG G+KV++ + + + Sbjct: 181 DIDYGFSEADTTYGKLGVKVWLYKGEILPEFKEE 214 >gi|320451294|ref|YP_004203390.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01] gi|320151463|gb|ADW22841.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01] Length = 239 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 141/224 (62%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+PI FRLG+ W SRW+A +Y LL ED +IRE L L AG+A+I IER Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLVEDQRIREVLTKELYPAGLARIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + V+ A+PG++IG+ G I+ +R LS +T + L+V E+ P ++A L+AQ + Sbjct: 61 ADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLSQLTGKNVALNVQEIHNPNLSAPLVAQRV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE EGRVPL TLRA Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMEAGAKGAKVIVSGRIGGAEQARTEWAAEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +IDYG A+A T YG G+K YV L + + R E Sbjct: 181 NIDYGFALARTTYGVLGVKAYVFLGEVIGGQKPKARPEGPRAEE 224 >gi|253681391|ref|ZP_04862188.1| ribosomal protein S3 [Clostridium botulinum D str. 1873] gi|253561103|gb|EES90555.1| ribosomal protein S3 [Clostridium botulinum D str. 1873] Length = 221 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 144/221 (65%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR++++ AGVAK IERT Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANNQNFADNLIEDDKIRKFIKKKCFSAGVAKTEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 K +I +++ +PG+IIGK G IE+I+ ++ +M + +++ EV +PE +A L+A++ Sbjct: 61 PKRVKINIHTGKPGMIIGKGGKGIEEIKSEILSMVREKNVIINIVEVKRPETDAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMRCGVKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A A+T YG G+KV++ + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYRGEVLPAKKVRTQEISQ 221 >gi|119962873|ref|YP_948651.1| ribosomal protein S3 [Arthrobacter aurescens TC1] gi|152060843|sp|A1R8T9|RS3_ARTAT RecName: Full=30S ribosomal protein S3 gi|119949732|gb|ABM08643.1| ribosomal protein S3 [Arthrobacter aurescens TC1] Length = 273 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 150/228 (65%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA G Y + ED+KIR+ + +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKPGQRYKDFVREDIKIRQLMSTGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAMK+A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRVACSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 TLRA+IDYG A+T +G G+KV++ D + + AA Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAQQAAAAPSRGR 228 >gi|222873445|gb|EEF10576.1| predicted protein [Populus trichocarpa] Length = 206 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 113/206 (54%), Positives = 155/206 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYG + AET YG G+KV+V D Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGD 206 >gi|284033996|ref|YP_003383927.1| 30S ribosomal protein S3 [Kribbella flavida DSM 17836] gi|283813289|gb|ADB35128.1| ribosomal protein S3 [Kribbella flavida DSM 17836] Length = 281 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 95/207 (45%), Positives = 143/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG++ SRW+A Y + ED+KIR L +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGISTDHKSRWYAD-KLYKDYVGEDVKIRRLLSKGMERAGISRVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E++A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGSLEELTGKQVQLNILEVKNAEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+ MR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSGRVAFRRAMRKAMQTTMRGGALGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 +DYG A T +G G+KV++ D Sbjct: 180 DVDYGFYEARTTFGRIGVKVWIYKGDV 206 >gi|222152271|ref|YP_002561446.1| 30S ribosomal protein S3 [Streptococcus uberis 0140J] gi|254764549|sp|B9DSV6|RS3_STRU0 RecName: Full=30S ribosomal protein S3 gi|222113082|emb|CAR40449.1| 30S ribosomal protein S3 [Streptococcus uberis 0140J] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|322410864|gb|EFY01772.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|224477214|ref|YP_002634820.1| 30S ribosomal protein S3 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421821|emb|CAL28635.1| 30S ribosomal protein S3 [Staphylococcus carnosus subsp. carnosus TM300] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 148/214 (69%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W+++W+A ++ LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWDAKWYAE-KDFSTLLHEDLKIRKFIDNELKEASVSNVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T +H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNKLTGKRVHINVIEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA GVK SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGALGVKTQVSGRLGGADIARAERYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNNS 213 >gi|309777138|ref|ZP_07672101.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 3_1_53] gi|308915008|gb|EFP60785.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 3_1_53] Length = 263 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L K A V+++ IER+ Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAECKNASVSRVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I++ +ARPG+IIG G ++E ++KK+ +T I+L V E+ P+++A L+A+S Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENVEMLKKKVEKLTGGKNIYLKVLEIANPDLDAKLVARS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDY A T YG G+KV++ + + P A Sbjct: 180 ADIDYAWEEASTTYGRLGVKVWICRGEVLPGQMVQEPEAPK 220 >gi|317968823|ref|ZP_07970213.1| 30S ribosomal protein S3 [Synechococcus sp. CB0205] Length = 242 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y +LL ED +IR+++ AG++ ++I R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYAPSKTYPSLLKEDDQIRKFIHKKYGAAGISDVVIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDSARQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR M+ A+Q A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRVMRMAIQRAQRAGVLGMKLQVSGRLNGAEIARTEWSREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T VA T YG GIKV+V + + + +P AA R + Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGTQDKVPVGAAPKRRASR 230 >gi|293190253|ref|ZP_06608749.1| ribosomal protein S3 [Actinomyces odontolyticus F0309] gi|292821069|gb|EFF80022.1| ribosomal protein S3 [Actinomyces odontolyticus F0309] Length = 269 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++ Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGARGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLRA+IDYG A T +G G+KV++ D +++ + AE Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQAQ 225 >gi|319940054|ref|ZP_08014408.1| 30S ribosomal protein S3 [Streptococcus anginosus 1_2_62CV] gi|319810768|gb|EFW07095.1| 30S ribosomal protein S3 [Streptococcus anginosus 1_2_62CV] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 145/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEAATTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|153854976|ref|ZP_01996189.1| hypothetical protein DORLON_02195 [Dorea longicatena DSM 13814] gi|149752473|gb|EDM62404.1| hypothetical protein DORLON_02195 [Dorea longicatena DSM 13814] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A ++ L ED +IR YL+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-KDFADCLVEDHEIRTYLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIVY+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGAEIEKVKGELAQFTDKKLIVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG G+KV++ + + + Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPEK 210 >gi|222823109|ref|YP_002574682.1| 30S ribosomal protein S3 [Campylobacter lari RM2100] gi|254764519|sp|B9KEE6|RS3_CAMLR RecName: Full=30S ribosomal protein S3 gi|222538330|gb|ACM63431.1| 30S ribosomal protein S3 [Campylobacter lari RM2100] Length = 233 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 111/232 (47%), Positives = 156/232 (67%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANMAENIGEDYKIRTFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ +RK+L N+ E+++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDVLRKELQNLIGKEVNINIKEERKAGASAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ GIKV++ + + ++ + PA + R + Sbjct: 181 KIDYGFAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEESAPAKKPRRARRG 232 >gi|125716991|ref|YP_001034124.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK36] gi|323350946|ref|ZP_08086604.1| 30S ribosomal protein S3 [Streptococcus sanguinis VMC66] gi|152060910|sp|A3CK69|RS3_STRSV RecName: Full=30S ribosomal protein S3 gi|125496908|gb|ABN43574.1| 30S ribosomal protein S3, putative [Streptococcus sanguinis SK36] gi|322122928|gb|EFX94634.1| 30S ribosomal protein S3 [Streptococcus sanguinis VMC66] gi|324989996|gb|EGC21937.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK353] gi|324991821|gb|EGC23746.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK405] gi|324996289|gb|EGC28197.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK678] gi|325686411|gb|EGD28441.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK72] gi|325689225|gb|EGD31231.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK115] gi|325695804|gb|EGD37701.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK150] gi|325697982|gb|EGD39865.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK160] gi|327458437|gb|EGF04793.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1] gi|327463717|gb|EGF10033.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1057] gi|327467341|gb|EGF12841.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK330] gi|327471736|gb|EGF17177.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK408] gi|327490457|gb|EGF22239.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1058] gi|328945211|gb|EGG39365.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1087] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A ++ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAISTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|227485519|ref|ZP_03915835.1| ribosomal protein S3 [Anaerococcus lactolyticus ATCC 51172] gi|227236518|gb|EEI86533.1| ribosomal protein S3 [Anaerococcus lactolyticus ATCC 51172] Length = 244 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 92/219 (42%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP +R+GV W+S+WFA ++ LL ED+KIRE+++ + +AG+A I IER Sbjct: 1 MGQKVNPKGYRVGVIKDWDSKWFADKKDFSDLLVEDVKIREFIKKYAFEAGIADIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 N ++ V++ +PG++IG+ G +E+++ K+ + + ++V E+ +++A L+A++ Sbjct: 61 VNNLKVTVFTGKPGMVIGRGGAGVEELKAKIERLAPGKRVIINVEEIKYQDLSAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE R+ FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR Sbjct: 121 IANQLENRIAFRRAMKQSIQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A+IDYG A A+T YG G KV++ + + + Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAEREPK 219 >gi|15676075|ref|NP_273206.1| 30S ribosomal protein S3 [Neisseria meningitidis MC58] gi|121634022|ref|YP_974267.1| 30S ribosomal protein S3 [Neisseria meningitidis FAM18] gi|161870909|ref|YP_001600089.1| 30S ribosomal protein S3 [Neisseria meningitidis 053442] gi|218767162|ref|YP_002341674.1| 30S ribosomal protein S3 [Neisseria meningitidis Z2491] gi|254805808|ref|YP_003084029.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha14] gi|304388949|ref|ZP_07370996.1| 30S ribosomal protein S3 [Neisseria meningitidis ATCC 13091] gi|54039502|sp|P66551|RS3_NEIMB RecName: Full=30S ribosomal protein S3 gi|54041959|sp|P66550|RS3_NEIMA RecName: Full=30S ribosomal protein S3 gi|152060886|sp|A1KRH9|RS3_NEIMF RecName: Full=30S ribosomal protein S3 gi|189045022|sp|A9M3W0|RS3_NEIM0 RecName: Full=30S ribosomal protein S3 gi|7225366|gb|AAF40606.1| 30S ribosomal protein S3 [Neisseria meningitidis MC58] gi|120865728|emb|CAM09457.1| 30S ribosomal protein S3 [Neisseria meningitidis FAM18] gi|121051170|emb|CAM07441.1| 30S ribosomal protein S3 [Neisseria meningitidis Z2491] gi|161596462|gb|ABX74122.1| 30S ribosomal protein S3 [Neisseria meningitidis 053442] gi|254669350|emb|CBA08429.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha14] gi|254670747|emb|CBA06990.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha153] gi|254672677|emb|CBA06542.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha275] gi|261391684|emb|CAX49133.1| 30S ribosomal protein S3 [Neisseria meningitidis 8013] gi|304337083|gb|EFM03270.1| 30S ribosomal protein S3 [Neisseria meningitidis ATCC 13091] gi|308388364|gb|ADO30684.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha710] gi|316985678|gb|EFV64624.1| ribosomal protein S3 [Neisseria meningitidis H44/76] gi|319411368|emb|CBY91779.1| 30S ribosomal protein S3 [Neisseria meningitidis WUE 2594] gi|325129067|gb|EGC51916.1| ribosomal protein S3 [Neisseria meningitidis N1568] gi|325131090|gb|EGC53813.1| ribosomal protein S3 [Neisseria meningitidis OX99.30304] gi|325133060|gb|EGC55732.1| ribosomal protein S3 [Neisseria meningitidis M6190] gi|325135154|gb|EGC57780.1| ribosomal protein S3 [Neisseria meningitidis M13399] gi|325137206|gb|EGC59801.1| ribosomal protein S3 [Neisseria meningitidis M0579] gi|325139038|gb|EGC61584.1| ribosomal protein S3 [Neisseria meningitidis ES14902] gi|325141162|gb|EGC63662.1| ribosomal protein S3 [Neisseria meningitidis CU385] gi|325143238|gb|EGC65577.1| ribosomal protein S3 [Neisseria meningitidis 961-5945] gi|325145345|gb|EGC67622.1| ribosomal protein S3 [Neisseria meningitidis M01-240013] gi|325197435|gb|ADY92891.1| ribosomal protein S3 [Neisseria meningitidis G2136] gi|325199361|gb|ADY94816.1| ribosomal protein S3 [Neisseria meningitidis H44/76] gi|325203017|gb|ADY98471.1| ribosomal protein S3 [Neisseria meningitidis M01-240149] gi|325203268|gb|ADY98721.1| ribosomal protein S3 [Neisseria meningitidis M01-240355] gi|325205241|gb|ADZ00694.1| ribosomal protein S3 [Neisseria meningitidis M04-240196] gi|325207184|gb|ADZ02636.1| ribosomal protein S3 [Neisseria meningitidis NZ-05/33] Length = 230 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 160/227 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DY T+ A T YG G+KV+V + S + + + +++ Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227 >gi|256390146|ref|YP_003111710.1| 30S ribosomal protein S3 [Catenulispora acidiphila DSM 44928] gi|256356372|gb|ACU69869.1| ribosomal protein S3 [Catenulispora acidiphila DSM 44928] Length = 292 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 103/225 (45%), Positives = 151/225 (67%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + + +AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRLMTEGMDRAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR KL +T ++ L++ EV PE +A L+AQ I Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGKLEKLTAKQVQLNILEVRNPESDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL +RV FRRAM++A+QS+M+ G G+KV SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAQRVAFRRAMRKAIQSSMKAGVKGIKVQVSGRLGGAEMSRSEQYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAAEHRVVE 224 +IDYG A+T +G G+KV++ D + + AAE R Sbjct: 180 NIDYGFYEAKTTFGRIGVKVWIYKGDVTSLSAQRALNAAEARAGR 224 >gi|297201735|ref|ZP_06919132.1| ribosomal protein S3 [Streptomyces sviceus ATCC 29083] gi|197710890|gb|EDY54924.1| ribosomal protein S3 [Streptomyces sviceus ATCC 29083] Length = 277 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|33866605|ref|NP_898164.1| 30S ribosomal protein S3 [Synechococcus sp. WH 8102] gi|61215690|sp|Q7U4J4|RS3_SYNPX RecName: Full=30S ribosomal protein S3 gi|33633383|emb|CAE08588.1| 30S ribosomal protein S3 [Synechococcus sp. WH 8102] Length = 242 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKSYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDRSRQVRINVVEVERVDGDAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY T VA T YG GIKV+V + + D IP Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAPLIPV 220 >gi|319760335|ref|YP_004124273.1| 30S ribosomal protein S3 [Candidatus Blochmannia vafer str. BVAF] gi|318039049|gb|ADV33599.1| 30S ribosomal protein S3 [Candidatus Blochmannia vafer str. BVAF] Length = 235 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 101/208 (48%), Positives = 153/208 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S W+A ++ L+ D ++R +L L +A +++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKFWYSTWYANNKDFSKNLNNDFEVRRFLTKELSKALISRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R+K++ ++ L+++EV KPE++A L+A +I Sbjct: 61 AKSMRVTIYTARPGIVIGKKGGDVEKLREKVAKISGVPTQLNISEVRKPELDAKLLADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRA+KRA QSA+R GA+G+K+ SGRL+GAE++RTE + EGRVPL TLRA Sbjct: 121 ASQLERRVIFRRAIKRAAQSAIRLGAEGIKIEISGRLSGAEIARTEWHREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 +IDY + A T YG G+KV++ + + Sbjct: 181 NIDYSLSEAYTTYGVLGVKVWIFKGEIL 208 >gi|289168726|ref|YP_003446995.1| 30S ribosomal protein S3 [Streptococcus mitis B6] gi|288908293|emb|CBJ23135.1| 30S ribosomal protein S3 [Streptococcus mitis B6] Length = 217 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A++ AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIRRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|134103258|ref|YP_001108919.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338] gi|291007949|ref|ZP_06565922.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338] gi|152060902|sp|A4FPL9|RS3_SACEN RecName: Full=30S ribosomal protein S3 gi|133915881|emb|CAM05994.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338] Length = 298 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 145/220 (65%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+KIR L +++AG++K+ IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVAEDVKIRRRLSRGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ + Sbjct: 60 RERVRVDIHTARPGIVIGRRGAEADRIRGSLEKLTGKQVQLNILEVKNAEADAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G++V GRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVSFRRAMRKAIQSAMRSPQVKGIRVQCGGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A T +G G+KV++ + V +E Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGELVGGLKQKQQESE 219 >gi|296272646|ref|YP_003655277.1| 30S ribosomal protein S3 [Arcobacter nitrofigilis DSM 7299] gi|296096820|gb|ADG92770.1| ribosomal protein S3 [Arcobacter nitrofigilis DSM 7299] Length = 232 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 112/225 (49%), Positives = 154/225 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + S A + ED KIR++++ L AG+A+ LIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPKFSSMPANVAEDSKIRKFVKKELYYAGIAQTLIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG D+EK++ L+ + EI +++ E KP+++ L A+++ Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKNSLTKLVGKEIAVNIKEERKPQLSGQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR +Q+A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRVMQNAIKGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A T YG G+KV++ + ++ + + Sbjct: 181 RIDYGFAEAHTTYGCVGVKVWIFKGEVLAKGIPVEKEEAAKPKRR 225 >gi|227832225|ref|YP_002833932.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975] gi|262183920|ref|ZP_06043341.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975] gi|254764525|sp|C3PKQ8|RS3_CORA7 RecName: Full=30S ribosomal protein S3 gi|227453241|gb|ACP31994.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975] Length = 248 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 105/215 (48%), Positives = 151/215 (70%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + W+A +Y + ED+KIREYL+ L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWYAD-KDYANYVAEDIKIREYLEKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQS+ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA A T +G GIKV++ D V + Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214 >gi|169350801|ref|ZP_02867739.1| hypothetical protein CLOSPI_01575 [Clostridium spiroforme DSM 1552] gi|169292387|gb|EDS74520.1| hypothetical protein CLOSPI_01575 [Clostridium spiroforme DSM 1552] Length = 217 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 99/214 (46%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ R+G+N W+SRW+A ++ LLHED+KIREYL LK A VA++ IER+ Sbjct: 1 MGQKVSPVGLRVGINRNWDSRWYANDQDFAGLLHEDIKIREYLLKKLKTASVARVEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I V+++RPG++IGK G ++ +RK++S M ++ +++ E+ P++ A L+A + Sbjct: 61 KNRVTIFVHTSRPGVVIGKDGEAVDALRKEVSKMVKDKQVFINIVEIKNPDVVAQLVANN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE R FR KRA+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLR Sbjct: 121 IAEQLENRASFRTVQKRAIQRAMRAGAKGIKTSVSGRLGGADMARAEGYSEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A IDY TA A+T YG G+KV++ + + + Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPEKKK 214 >gi|297564043|ref|YP_003683016.1| ribosomal protein S3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848492|gb|ADH70510.1| ribosomal protein S3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 268 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 101/206 (49%), Positives = 143/206 (69%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR L +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KSYKDYVKEDVAIRRMLTRGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ VY+ARPG++IG++G + ++IR L +T ++ L+V EV PEI+A L+AQ + Sbjct: 60 RDRVRVDVYTARPGIVIGRRGVEADRIRTDLEKLTGKQVQLNVFEVKNPEIDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+Q+AM+ GA G+++ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVAFRRAMRKAMQTAMKSGAKGIRIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGD 205 >gi|32266883|ref|NP_860915.1| 30S ribosomal protein S3 [Helicobacter hepaticus ATCC 51449] gi|61215709|sp|Q7VGD8|RS3_HELHP RecName: Full=30S ribosomal protein S3 gi|32262935|gb|AAP77981.1| ribosomal protein S3 [Helicobacter hepaticus ATCC 51449] Length = 236 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 153/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W+SRWF+ + + ED KIR++L+ + AGV++ +IER Sbjct: 1 MGQKVNPIGLRLGINRNWSSRWFSVSQTTPSNILEDHKIRKFLKREMYYAGVSEFIIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ V ++RPGLIIGKKG DI+K ++ L + + E+ +++ E +P+ NA L A++I Sbjct: 61 ANKIRVTVVASRPGLIIGKKGVDIDKHKEALKKILHKEVFINIKEAKRPQANAQLAAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAAMKAGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G+KV++ + + E + +K+ Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFKGEVLHKGILPEKKEESKSGDKE 226 >gi|167755918|ref|ZP_02428045.1| hypothetical protein CLORAM_01438 [Clostridium ramosum DSM 1402] gi|237733234|ref|ZP_04563715.1| 30S ribosomal protein S3 [Mollicutes bacterium D7] gi|167703910|gb|EDS18489.1| hypothetical protein CLORAM_01438 [Clostridium ramosum DSM 1402] gi|229383615|gb|EEO33706.1| 30S ribosomal protein S3 [Coprobacillus sp. D7] Length = 217 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GVN W+SRW+A ++ LLHED+KIREYL LK A VAK+ IER+ Sbjct: 1 MGQKVSPIGLRVGVNRNWDSRWYANDQDFAGLLHEDIKIREYLLKKLKTASVAKVEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I V+++RPG++IGK G ++ +RK++S M ++ +++ E+ P++ A L+A + Sbjct: 61 KNRVTIFVHTSRPGVVIGKDGEAVDALRKEVSKMVKDKQVFINIVEIKNPDVVAQLVANN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE R FR KRA+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLR Sbjct: 121 IAEQLENRASFRTVQKRAIQRAMRAGAKGIKTSVSGRLGGADMARAEGYSEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A IDY TA A+T YG G+KV++ + + + Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPEKKK 214 >gi|325964160|ref|YP_004242066.1| 30S ribosomal protein S3P [Arthrobacter phenanthrenivorans Sphe3] gi|323470247|gb|ADX73932.1| SSU ribosomal protein S3P [Arthrobacter phenanthrenivorans Sphe3] Length = 277 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 150/230 (65%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKAGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A+T +G G+KV++ D + + A+ Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAQQAASAPSRGRSG 230 >gi|172056146|ref|YP_001812606.1| ribosomal protein S3 [Exiguobacterium sibiricum 255-15] gi|226697712|sp|B1YGV6|RS3_EXIS2 RecName: Full=30S ribosomal protein S3 gi|171988667|gb|ACB59589.1| ribosomal protein S3 [Exiguobacterium sibiricum 255-15] Length = 218 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 102/218 (46%), Positives = 146/218 (66%), Gaps = 2/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+G+ W SRWFA +Y LLHED +REY++ LK A V+K+ IER Sbjct: 1 MGQKINPTGLRVGIIKDWESRWFAD-KDYADLLHEDYVVREYIEKRLKDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 I +++A+PG++IGK G++IE +R ++N+ +H++V EV P+ A L+A++ Sbjct: 60 ANRLNISLHTAKPGMVIGKGGSEIETLRTDITNLAKGKRVHVNVVEVKNPDAVAKLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE RV FRRAMK+++Q +MR G G+K SGRL GA+++R+E Y EG VPL TLR Sbjct: 120 IARQLEGRVSFRRAMKQSIQRSMRSGIKGIKTEVSGRLGGADIARSEKYSEGTVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDYGTA A+T YG G+KV++ + + + Sbjct: 180 ADIDYGTAEADTTYGKIGVKVWLHHGEVLPTKKAASNE 217 >gi|322374051|ref|ZP_08048585.1| ribosomal protein S3 [Streptococcus sp. C150] gi|321277017|gb|EFX54088.1| ribosomal protein S3 [Streptococcus sp. C150] Length = 217 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRVQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|157151263|ref|YP_001451229.1| 30S ribosomal protein S3 [Streptococcus gordonii str. Challis substr. CH1] gi|262283577|ref|ZP_06061342.1| ribosomal protein S3 [Streptococcus sp. 2_1_36FAA] gi|172045618|sp|A8AZL9|RS3_STRGC RecName: Full=30S ribosomal protein S3 gi|157076057|gb|ABV10740.1| ribosomal protein S3 [Streptococcus gordonii str. Challis substr. CH1] gi|262260634|gb|EEY79335.1| ribosomal protein S3 [Streptococcus sp. 2_1_36FAA] Length = 217 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPARKNTK 214 >gi|319743989|gb|EFV96369.1| 30S ribosomal protein S3 [Streptococcus agalactiae ATCC 13813] Length = 217 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I Sbjct: 60 VNKVIVSLHTAKPGIVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|315222814|ref|ZP_07864700.1| ribosomal protein S3 [Streptococcus anginosus F0211] gi|315188117|gb|EFU21846.1| ribosomal protein S3 [Streptococcus anginosus F0211] Length = 217 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R KL+ +T+ ++H+++ E+ P+++A L+ + I Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTSKQVHINIIEIKSPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|319893194|ref|YP_004150069.1| SSU ribosomal protein S3p (S3e) [Staphylococcus pseudintermedius HKU10-03] gi|317162890|gb|ADV06433.1| SSU ribosomal protein S3p (S3e) [Staphylococcus pseudintermedius HKU10-03] gi|323463758|gb|ADX75911.1| ribosomal protein S3 [Staphylococcus pseudintermedius ED99] Length = 217 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 149/214 (69%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W+++W+A ++ +LLHEDLKIR+++ LK A V+ + IER Sbjct: 1 MGQKINPIGLRVGVIRDWDAKWYAE-KDFASLLHEDLKIRKFIDKALKDASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNQLTDKKVHINVVEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAIGRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + ++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKNS 213 >gi|291549410|emb|CBL25672.1| SSU ribosomal protein S3P [Ruminococcus torques L2-14] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|325261500|ref|ZP_08128238.1| ribosomal protein S3 [Clostridium sp. D5] gi|324032954|gb|EGB94231.1| ribosomal protein S3 [Clostridium sp. D5] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 148/211 (70%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AGV++I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKKLYSAGVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +II+Y+A+PG++IGK G++IEK++ +L+ TN ++ + + EV +P+ +A L+A++I Sbjct: 60 SERIKIIIYTAKPGVVIGKGGSEIEKVKAELTQYTNKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|167748436|ref|ZP_02420563.1| hypothetical protein ANACAC_03180 [Anaerostipes caccae DSM 14662] gi|317472031|ref|ZP_07931363.1| ribosomal protein S3 [Anaerostipes sp. 3_2_56FAA] gi|167652428|gb|EDR96557.1| hypothetical protein ANACAC_03180 [Anaerostipes caccae DSM 14662] gi|316900435|gb|EFV22417.1| ribosomal protein S3 [Anaerostipes sp. 3_2_56FAA] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 101/214 (47%), Positives = 148/214 (69%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+SRW+A G + L ED KIR+Y++ L AG+++I IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAEG-NFADNLVEDDKIRKYVKKKLYNAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IVY+A+PG++IGK G+ IE+++K+L MT+ ++ + V EV +P+ +A L+A++I Sbjct: 60 SDRVKLIVYTAKPGVVIGKGGSAIEELKKELQKMTDKKLLIDVKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMQRTMRSGAQGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A+T YG G+K ++ + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKTWIYHGEVLPTKEKQ 213 >gi|197303818|ref|ZP_03168854.1| hypothetical protein RUMLAC_02557 [Ruminococcus lactaris ATCC 29176] gi|197297111|gb|EDY31675.1| hypothetical protein RUMLAC_02557 [Ruminococcus lactaris ATCC 29176] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|215410263|ref|ZP_03419071.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A] gi|298524198|ref|ZP_07011607.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A] gi|298493992|gb|EFI29286.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A] Length = 212 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 101/208 (48%), Positives = 142/208 (68%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 A IDYG A+T +G G+KV++ D Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDI 207 >gi|328955908|ref|YP_004373241.1| SSU ribosomal protein S3P [Coriobacterium glomerans PW2] gi|328456232|gb|AEB07426.1| SSU ribosomal protein S3P [Coriobacterium glomerans PW2] Length = 239 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 110/222 (49%), Positives = 150/222 (67%), Gaps = 4/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FRLG+ W SRWFA +Y A + DL+IR YL L +A V+++ IER Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAASIGNDLEIRRYLTKRLTRAAVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 +II+ S RPG++IGKKG +I+ +R +L + + + + V E+ +PEI+A L+A Sbjct: 60 GDKVKIIILSGRPGIVIGKKGAEIDALRTELERVAGVSKGNLSIDVIEIRRPEIDAKLVA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL G+E+ R E Y EGRVPL T Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSASKAGAKGIRIQCSGRLGGSEMGRREWYREGRVPLHT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA IDYGTA A T GSCG+KV++ L + + + PA E Sbjct: 180 LRAKIDYGTATAHTTMGSCGVKVWIFLGERMPGQPTPNPALE 221 >gi|290958145|ref|YP_003489327.1| 30S ribosomal protein S3 [Streptomyces scabiei 87.22] gi|260647671|emb|CBG70776.1| 30S ribosomal protein S3 [Streptomyces scabiei 87.22] Length = 277 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|224417891|ref|ZP_03655897.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491] gi|253827230|ref|ZP_04870115.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491] gi|313141433|ref|ZP_07803626.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491] gi|253510636|gb|EES89295.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491] gi|313130464|gb|EFR48081.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491] Length = 235 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 114/220 (51%), Positives = 152/220 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV+ ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSFATAPQNVAEDYKIRKFLKKELYYAGVSDILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ V +ARPG+IIGKKG D+EK+++ L+ + N +I L++ EV KP+ NA L A+S+ Sbjct: 61 ARKVRVTVVAARPGIIIGKKGADVEKLKESLNKIVNKDIFLNIKEVKKPQSNAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG+ G+KV++ + + E Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQAEKPQEE 220 >gi|254495717|ref|ZP_05108633.1| 30S ribosomal protein S3 [Legionella drancourtii LLAP12] gi|254355064|gb|EET13683.1| 30S ribosomal protein S3 [Legionella drancourtii LLAP12] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 112/219 (51%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ WNS+WFA G Y L++D+K+R L+ L A V+KILIER Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLNQDIKLRSELKKKLMGAAVSKILIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + + +ARPG+IIGKKG IE +R ++S +HL++ E+ KPE+++TL+A+SI Sbjct: 60 ANNAVVTIQTARPGVIIGKKGGGIETLRNEISKKLGVPVHLNIEEIKKPELDSTLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKSGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA ++T YG G+KV++ + + + +A+ Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEVLPQKKRSTDSAQ 218 >gi|210611131|ref|ZP_03288745.1| hypothetical protein CLONEX_00935 [Clostridium nexile DSM 1787] gi|210152118|gb|EEA83125.1| hypothetical protein CLONEX_00935 [Clostridium nexile DSM 1787] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++K+L T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKKELQQFTDKKLVVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|87300907|ref|ZP_01083749.1| 30S ribosomal protein S3 [Synechococcus sp. WH 5701] gi|87284778|gb|EAQ76730.1| 30S ribosomal protein S3 [Synechococcus sp. WH 5701] Length = 242 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 96/220 (43%), Positives = 136/220 (61%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQDHRSRWYAPSKTYPTLLQEDDRIRCFIHKKYASAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R +K N ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRAGIQKTVGDRNRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR M+ VQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRVMRMTVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY T VA T YG GIKV+V + + +P Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGQQEKLPV 220 >gi|329770034|ref|ZP_08261429.1| 30S ribosomal protein S3 [Gemella sanguinis M325] gi|328837345|gb|EGF86975.1| 30S ribosomal protein S3 [Gemella sanguinis M325] Length = 217 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 150/215 (69%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +IDY A+T YG G+KV+++ + + S Sbjct: 180 NIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214 >gi|54293327|ref|YP_125742.1| 30S ribosomal protein S3 [Legionella pneumophila str. Lens] gi|61215403|sp|Q5WZK6|RS3_LEGPL RecName: Full=30S ribosomal protein S3 gi|53753159|emb|CAH14606.1| 30S ribosomal protein S3 [Legionella pneumophila str. Lens] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ WNS+WFA G Y L +D+K+R L+ L A V+KILIER Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLIQDIKLRSDLKKKLMAAAVSKILIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + + +ARPG+IIGKKG IE +RK++S+ +HL++ EV KPE++ATL+A+ I Sbjct: 60 ANNAVVTILTARPGVIIGKKGGGIETLRKEISDSLGVPVHLNIEEVKKPELDATLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA ++T YG G+KV++ + + + +A+ Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEILPQKKRSTESAQ 218 >gi|313889579|ref|ZP_07823224.1| ribosomal protein S3 [Streptococcus pseudoporcinus SPIN 20026] gi|313122088|gb|EFR45182.1| ribosomal protein S3 [Streptococcus pseudoporcinus SPIN 20026] Length = 217 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLSIRKFIQKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDTLRAQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214 >gi|302536257|ref|ZP_07288599.1| ribosomal protein S3 [Streptomyces sp. C] gi|302445152|gb|EFL16968.1| ribosomal protein S3 [Streptomyces sp. C] Length = 279 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPELDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|266620257|ref|ZP_06113192.1| ribosomal protein S3 [Clostridium hathewayi DSM 13479] gi|288868160|gb|EFD00459.1| ribosomal protein S3 [Clostridium hathewayi DSM 13479] Length = 218 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 146/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED K+R YL+ L AGV+ I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLVEDYKLRTYLKKRLYSAGVSDIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+++A+PG++IGK G++IEK++ ++ MT+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVKIIIHTAKPGVVIGKGGSEIEKLKAEVQKMTDKKLFVDIKEIKRPDKDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMGRSMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEILPTK 210 >gi|45644699|gb|AAS73087.1| predicted ribosomal protein S3 [uncultured marine gamma proteobacterium EBAC20E09] Length = 219 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 151/207 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG++ N+ W+A+G ++ L +DLK+RE++ LK + ++K+ +ER Sbjct: 1 MGQKVNPNGFRLGISKKQNANWYAKGKDFSNNLIQDLKVREFINNRLKNSSISKVELERN 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +Y+ARPG+IIGK+G +IE ++KK+ + S +++ EV KP+++A ++A+ + Sbjct: 61 ADTFIVNIYTARPGIIIGKRGEEIENLKKKIEKIVKSSTQINIKEVRKPDLDAKILAEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKR VQSA+R A GV++ SGRLNGAE++RTE Y EGRVPL TLRA Sbjct: 121 AQQLEKRVMFRRAMKRTVQSALRQSAKGVRIEVSGRLNGAEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYGTA A T YG G+KV+V + Sbjct: 181 DIDYGTAEALTTYGIIGVKVWVYRGEI 207 >gi|28212171|ref|NP_783115.1| 30S ribosomal protein S3 [Clostridium tetani E88] gi|61215763|sp|Q890P3|RS3_CLOTE RecName: Full=30S ribosomal protein S3 gi|28204615|gb|AAO37052.1| SSU ribosomal protein S3P [Clostridium tetani E88] Length = 222 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 95/220 (43%), Positives = 142/220 (64%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED IR +++ + AG++KI IER Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKKNFSDNLVEDNNIRNFVKKKVYAAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 K ++ +Y+A+PG++IGK G IE ++ +L N+ N I +++ EV E +A L+A+ Sbjct: 61 GKRVKLNIYTAKPGMVIGKGGQGIEALKGELKNIVSDNKNILINIVEVKSAETDAQLMAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++AQQLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GA+++RTE Y EG +PLQTL Sbjct: 121 NVAQQLEKRISFRRAMKQTIQRAMKSGIKGVKTACSGRLGGADIARTEFYHEGTIPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 RA IDYG A A+T YG G+KV+V + + Sbjct: 181 RADIDYGFAEADTTYGKIGVKVWVYKGEVLPAKKEVKEEV 220 >gi|254449319|ref|ZP_05062764.1| ribosomal protein S3 [gamma proteobacterium HTCC5015] gi|198261078|gb|EDY85378.1| ribosomal protein S3 [gamma proteobacterium HTCC5015] Length = 228 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 107/228 (46%), Positives = 158/228 (69%), Gaps = 3/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP RLG+ W ++W+A EY L+ D+++R++++ L+QA V++I IER Sbjct: 1 MGHKVNPTGIRLGIATDWTAKWYAERGEYAENLYSDIQVRDFIRKRLEQAAVSRIQIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 K I +++ARPG++IGKKG DIE++R++++ + I +++ E+ KPE++ATL A Sbjct: 61 AKQAVITIHTARPGVVIGKKGEDIERLRQEVAKLMQVPPQAIKVNIEEIRKPELDATLTA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QS+AQQLERR++FRRAM+RAV +AMR GA G+K+ GRLNGAE++RTE Y EGRVPL T Sbjct: 121 QSVAQQLERRIMFRRAMRRAVGNAMRLGAQGIKINVGGRLNGAEIARTEWYREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 LRA IDYGTA A T YG G+KV++ + +A + ++ Sbjct: 181 LRADIDYGTAEASTTYGIIGVKVWIYKGEVFDFEAKRNKSAGDKSAKQ 228 >gi|297625788|ref|YP_003687551.1| 30S ribosomal protein S3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921553|emb|CBL56107.1| 30S ribosomal protein S3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 272 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 143/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLG+ SRW+A +Y L+ ED KIR +L +L++AG++ + IER Sbjct: 1 MGQKINPIGFRLGITTDHKSRWYAE-KQYSELVGEDDKIRAWLVKNLERAGISSVEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +Y+ARPG++IG+ G + E++R +L M+ +I L++ EV PE +A L+AQ I Sbjct: 60 SDRITIFLYAARPGIVIGRNGAEAERVRGELEKMSGKQIQLNILEVKNPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAMR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLGARVAFRRAMRKAQQSAMRSGAKGIRIRCSGRLGGAEMSRSESYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDV 206 >gi|254383166|ref|ZP_04998520.1| 30S ribosomal protein S3 [Streptomyces sp. Mg1] gi|194342065|gb|EDX23031.1| 30S ribosomal protein S3 [Streptomyces sp. Mg1] Length = 280 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPELDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|52840580|ref|YP_094379.1| 30S ribosomal protein S3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296371|ref|YP_122740.1| 30S ribosomal protein S3 [Legionella pneumophila str. Paris] gi|148361047|ref|YP_001252254.1| 30S ribosomal protein S3 [Legionella pneumophila str. Corby] gi|296105884|ref|YP_003617584.1| small subunit ribosomal protein S3 [Legionella pneumophila 2300/99 Alcoy] gi|61215411|sp|Q5X853|RS3_LEGPA RecName: Full=30S ribosomal protein S3 gi|61215431|sp|Q5ZYN7|RS3_LEGPH RecName: Full=30S ribosomal protein S3 gi|189045016|sp|A5IHQ8|RS3_LEGPC RecName: Full=30S ribosomal protein S3 gi|52627691|gb|AAU26432.1| 30S ribosomal protein S3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750156|emb|CAH11548.1| 30S ribosomal protein S3 [Legionella pneumophila str. Paris] gi|148282820|gb|ABQ56908.1| 30S ribosomal protein S3 [Legionella pneumophila str. Corby] gi|295647785|gb|ADG23632.1| small subunit ribosomal protein S3 [Legionella pneumophila 2300/99 Alcoy] gi|307609144|emb|CBW98599.1| 30S ribosomal protein S3 [Legionella pneumophila 130b] Length = 218 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ WNS+WFA G Y L +D+K+R L+ L A V+KILIER Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLIQDIKLRNDLKKKLMAAAVSKILIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + + +ARPG+IIGKKG IE +RK++S+ +HL++ EV KPE++ATL+A+ I Sbjct: 60 ANNAVVTILTARPGVIIGKKGGGIETLRKEISDNLGVPVHLNIEEVKKPELDATLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA ++T YG G+KV++ + + + +A+ Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEILPQKKRSTESAQ 218 >gi|163840900|ref|YP_001625305.1| SSU ribosomal protein S3P [Renibacterium salmoninarum ATCC 33209] gi|189045322|sp|A9WSV3|RS3_RENSM RecName: Full=30S ribosomal protein S3 gi|162954376|gb|ABY23891.1| SSU ribosomal protein S3P [Renibacterium salmoninarum ATCC 33209] Length = 282 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 103/228 (45%), Positives = 150/228 (65%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S WFA ++ Y + ED+KIR+ + +++AG+AK+ Sbjct: 1 MGQKVNPHGFRLGITTNHVSHWFADSNKAGQRYKDFVREDIKIRQLMSTGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAMK+A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLSSRVAFRRAMKKAMQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 TLRA IDYG A+T +G G+KV++ D + + A+ Sbjct: 181 TLRAQIDYGFFEAKTTFGRIGVKVWIYKGDVTAKELAQQAASAPSRGR 228 >gi|118602219|ref|YP_903434.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|152060901|sp|A1AVK6|RS3_RUTMC RecName: Full=30S ribosomal protein S3 gi|118567158|gb|ABL01963.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 232 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 102/221 (46%), Positives = 152/221 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W+S+W+A +Y L D+K+R+YL L A V++I IER Sbjct: 1 MGQKVNPKGIRLGIVKDWDSKWYANSQDYSKYLLSDIKVRDYLFDKLTNASVSRIQIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N +I +++ARPG+IIGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I Sbjct: 61 ANNAKITIHTARPGIIIGKKGADIEQLKSIVSKMMGIPVHINIEEIKKPELDARLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV++RRA+KR + + R GA G+KV+ +GRLNGAE++R+E Y EGRVPL T RA Sbjct: 121 AQQLEKRVMYRRAVKRVLGNTTRLGAKGIKVMVNGRLNGAEIARSEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +DY + A T YG GIKV++ + ++ T+ R Sbjct: 181 DVDYSSYGANTQYGVIGIKVWIFKGEILNHKKGTLDEVARR 221 >gi|261380565|ref|ZP_05985138.1| ribosomal protein S3 [Neisseria subflava NJ9703] gi|284796533|gb|EFC51880.1| ribosomal protein S3 [Neisseria subflava NJ9703] Length = 230 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 157/222 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W+S+WFA+ +++ +L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWSSKWFAKSTDFSTVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEILKRDLQTLMGVPVHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 ++DY T+ A T YG G+KV+V + S + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHEKKQRKA 222 >gi|239623353|ref|ZP_04666384.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522319|gb|EEQ62185.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 218 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 146/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNIRKFLKKRLFSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G++IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGSEIEKLKKEVQKLTDKKLFVDIKEIKRPDKDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ASQLENRVSFRRAMKSTMGRTMKAGVKGIKTAVAGRLGGADIARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210 >gi|78484646|ref|YP_390571.1| ribosomal protein S3 [Thiomicrospira crunogena XCL-2] gi|91207847|sp|Q31IX6|RS3_THICR RecName: Full=30S ribosomal protein S3 gi|78362932|gb|ABB40897.1| SSU ribosomal protein S3P [Thiomicrospira crunogena XCL-2] Length = 228 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ WN+RW+A Y L D++IR+ L LK A V++I IER Sbjct: 1 MGQKVHPIGIRLGITKDWNARWYADSKNYSDFLISDIEIRKELNEKLKHASVSQINIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IGKKG DIEK+++ L T +++++ E+ KPE++A L+A+ I Sbjct: 61 ANGVRVTIHTARPGVVIGKKGEDIEKLKQALIAKTGMPVNINIEEIKKPELDAKLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMKRAV +AMR GA G+KV SGRLNGAE++R E Y EGRVPL TLRA Sbjct: 121 AQQLEKRIQFRRAMKRAVSNAMRLGAQGIKVNVSGRLNGAEIARAEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY T A+T YG G+KV++ +++ Sbjct: 181 DIDYATFEADTTYGKIGVKVWIFKGEKL 208 >gi|302036671|ref|YP_003796993.1| 30S ribosomal protein S3 [Candidatus Nitrospira defluvii] gi|300604735|emb|CBK41067.1| 30S ribosomal protein S3 [Candidatus Nitrospira defluvii] Length = 222 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 103/209 (49%), Positives = 155/209 (74%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI +R+G N TW+SRW+A +Y LLH+D+KIR+ ++ L AGVAK+ IER+ Sbjct: 1 MGQKTHPIGYRIGYNYTWSSRWYAD-KDYARLLHQDIKIRKMVKAKLYHAGVAKVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG+IIG+KG +++K++ L + + +++V E+ KPE++A L+++++ Sbjct: 60 GDQTRVIIHTARPGIIIGRKGAEVDKLKAALEKEYSGQAYITVKEIKKPELDAQLVSENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMKR+VQSA+R GA G+K++ +GRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 ATQLEKRVAFRRAMKRSVQSALRLGAQGIKIMVAGRLGGAEIARTEWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 +DYG A A T G G+K ++ + + Sbjct: 180 EVDYGFAEAHTTMGQIGVKTWIYKGELLP 208 >gi|289565366|ref|ZP_06445816.1| 30S ribosomal protein S3 [Enterococcus faecium D344SRF] gi|289162856|gb|EFD10706.1| 30S ribosomal protein S3 [Enterococcus faecium D344SRF] Length = 223 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 95/217 (43%), Positives = 147/217 (67%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFISTKLADAAVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T IH+++ E+ KP+++A L+ + I Sbjct: 60 TGRVNISIHTAKPGMVIGKGGSEVESLRKELNKLTGKRIHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRSMRAGAQGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDY A+T YG G+KV++ + + + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKTLRKE 216 >gi|187934093|ref|YP_001884479.1| 30S ribosomal protein S3 [Clostridium botulinum B str. Eklund 17B] gi|226697685|sp|B2TII1|RS3_CLOBB RecName: Full=30S ribosomal protein S3 gi|187722246|gb|ACD23467.1| 30S ribosomal protein S3 [Clostridium botulinum B str. Eklund 17B] Length = 221 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A ++ L ED +IR++++ L AG++KI IER Sbjct: 1 MGQKVHPHGLRVGVIKGWDAKWYANKKDFADNLVEDNQIRKFVKKELFSAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG++IGK G+ IE ++KKL+N ++ I +++ EV E A L+A++ Sbjct: 61 AKRVKLNIYTAKPGVVIGKGGSGIESLKKKLTNYISGKNILINIVEVKSVEAEAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMRHGIKGVKTSCSGRLGGAEIARTEHYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A T YG G+KV+V + + A Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVEKEEA 219 >gi|150015049|ref|YP_001307303.1| 30S ribosomal protein S3 [Clostridium beijerinckii NCIMB 8052] gi|189044968|sp|A6LPR7|RS3_CLOB8 RecName: Full=30S ribosomal protein S3 gi|149901514|gb|ABR32347.1| ribosomal protein S3 [Clostridium beijerinckii NCIMB 8052] Length = 221 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 141/219 (64%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++W+A + L ED KIR++++ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKGWDAKWYANKKNFADNLIEDNKIRKFVKKELFSAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G+ IE K + N + +++ EV E +A L+A++ Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGSGIEALKNKLTQFVENKNVLINIVEVKSAEADAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMKHGIKGVKTACSGRLGGAEIARTEHYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A+T YG G+KV+V + + A Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKEEA 219 >gi|262197182|ref|YP_003268391.1| ribosomal protein S3 [Haliangium ochraceum DSM 14365] gi|262080529|gb|ACY16498.1| ribosomal protein S3 [Haliangium ochraceum DSM 14365] Length = 223 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLGV TW+S+W+ Y LHEDLK++ +++ L+ A V+ I +ER Sbjct: 1 MGQKTHPIGFRLGVIKTWSSKWY-EEKNYSKWLHEDLKLKRFIKRKLQHAAVSYIDVERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+ARPG++IGK+G +E +++ + ++T++E+ L++ EV K E NA L+A++I Sbjct: 60 ANKAKINIYTARPGIVIGKRGAGVETLKRDVQSLTDNEVFLNIVEVRKAETNAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AVQ+AM+FG G++V ++GRL G+E+SR E Y EGRVPL TLRA Sbjct: 120 ATQLERRIAFRRAMKKAVQTAMKFGCKGIRVASAGRLGGSEMSRREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A+T YG+ G+K ++ + + + ++ Sbjct: 180 DIDYGFTEAKTTYGTIGVKCWIFHGEILPVREGQQQQSQPSAGR 223 >gi|220903940|ref|YP_002479252.1| ribosomal protein S3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254764527|sp|B8IYH8|RS3_DESDA RecName: Full=30S ribosomal protein S3 gi|219868239|gb|ACL48574.1| ribosomal protein S3 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 213 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 112/208 (53%), Positives = 148/208 (71%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ EY A ++ED KIR +++ L AG++KI IER Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYPAFVYEDSKIRAFVKKLLYHAGLSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE++A L+A++I Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRNDLRQKFGREFSLEVNEIRRPEVDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR V A +FG +G+KV SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEARTTYGIIGVKVWIYKGEIL 207 >gi|116334263|ref|YP_795790.1| 30S ribosomal protein S3 [Lactobacillus brevis ATCC 367] gi|122269055|sp|Q03PW3|RS3_LACBA RecName: Full=30S ribosomal protein S3 gi|116099610|gb|ABJ64759.1| SSU ribosomal protein S3P [Lactobacillus brevis ATCC 367] Length = 219 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W ++W+A ++ A L EDL+IR++++ L A V+ + IER Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLKEDLQIRKFIEKRLVDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ ++I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNDLTGKRVHINIVEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM+ +Q MR GA G+K +GRLNGA++SR E Y EG VPL TLRA Sbjct: 120 ARQLEGRVAFRRAMRGTMQRTMRSGAKGIKTQVAGRLNGADMSRVESYAEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A T YGS G+K ++ + + + + Sbjct: 180 DIDYAWVEAHTTYGSLGVKTWIYRGEILPEKKQS 213 >gi|329117513|ref|ZP_08246230.1| ribosomal protein S3 [Streptococcus parauberis NCFD 2020] gi|326907918|gb|EGE54832.1| ribosomal protein S3 [Streptococcus parauberis NCFD 2020] Length = 217 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELAEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A+T YG G+KV++ + + +T Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTRKNTK 214 >gi|78211922|ref|YP_380701.1| 30S ribosomal protein S3 [Synechococcus sp. CC9605] gi|123743385|sp|Q3AMN6|RS3_SYNSC RecName: Full=30S ribosomal protein S3 gi|78196381|gb|ABB34146.1| ribosomal protein S3 [Synechococcus sp. CC9605] Length = 242 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 97/220 (44%), Positives = 139/220 (63%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKNYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDSSRQVRINVVEVERVDGDAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY T VA T YG GIKV+V + +S+ +P Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLSEQAQPMPV 220 >gi|188588786|ref|YP_001919678.1| 30S ribosomal protein S3 [Clostridium botulinum E3 str. Alaska E43] gi|251779346|ref|ZP_04822266.1| 30S ribosomal protein S3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226697684|sp|B2UYB6|RS3_CLOBA RecName: Full=30S ribosomal protein S3 gi|188499067|gb|ACD52203.1| 30S ribosomal protein S3 [Clostridium botulinum E3 str. Alaska E43] gi|243083661|gb|EES49551.1| 30S ribosomal protein S3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 221 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A ++ L ED +IR++++ L AG++KI IER Sbjct: 1 MGQKVHPHGLRVGVIKGWDAKWYANKKDFADNLVEDNQIRKFVKKELFSAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG++IGK G+ IE ++KKL+N ++ I +++ EV E A L+A++ Sbjct: 61 AKRVKLNIYTAKPGVVIGKGGSGIESLKKKLTNYISGKNILINIVEVKSVEAEAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMRHGIKGVKTACSGRLGGAEIARTEHYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A T YG G+KV+V + + A Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVEKEEA 219 >gi|329938226|ref|ZP_08287677.1| 30S ribosomal protein S3 [Streptomyces griseoaurantiacus M045] gi|329302715|gb|EGG46605.1| 30S ribosomal protein S3 [Streptomyces griseoaurantiacus M045] Length = 276 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|225571559|ref|ZP_03780555.1| hypothetical protein CLOHYLEM_07657 [Clostridium hylemonae DSM 15053] gi|225159636|gb|EEG72255.1| hypothetical protein CLOHYLEM_07657 [Clostridium hylemonae DSM 15053] Length = 218 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A E+ L ED IR YL+ L AG++ I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KEFADYLVEDHDIRTYLKKRLYSAGISDIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGVEIEKVKGELKRFTDKKLVVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A T YG G+KV++ + + + Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPEK 210 >gi|317507415|ref|ZP_07965149.1| ribosomal protein S3 [Segniliparus rugosus ATCC BAA-974] gi|316254300|gb|EFV13636.1| ribosomal protein S3 [Segniliparus rugosus ATCC BAA-974] Length = 272 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG+ W SRWFA +Y + ED++IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKIHPHGFRLGITTDWRSRWFAD-KQYKDYIKEDIQIRKLLISGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVKNSETIAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G+KV+ GRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRHPQVKGIKVMCGGRLGGAEMSRSEYYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGFHEAKTTFGRIGVKVWIYKGDIVGGR 211 >gi|301057494|ref|ZP_07198590.1| ribosomal protein S3 [delta proteobacterium NaphS2] gi|300448422|gb|EFK12091.1| ribosomal protein S3 [delta proteobacterium NaphS2] Length = 219 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 110/215 (51%), Positives = 154/215 (71%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG+ W+SRW+A GS+Y ++ED KIRE+L+ + QAGV+KI IER Sbjct: 1 MGQKVHPISFRLGIIRNWDSRWYA-GSQYSTFVYEDFKIREFLKKRVYQAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ARPG++IGKKG +IEK ++ L M ++ L + EV K E++A L+A+++ Sbjct: 60 ASKVRIRMHTARPGIVIGKKGVEIEKTKRDLEKMIKRDVILDIQEVRKAEVDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK++V SA+RFGA G+K+ +GRL GAE++R E Y EGRVPL T+RA Sbjct: 120 ATQLERRVAFRRAMKKSVTSALRFGAQGIKIACAGRLGGAEMARREWYREGRVPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A A T YG G+KV + + + + + Sbjct: 180 DIDYGFAQAYTTYGVIGVKVTIFKGEILPEKKQKV 214 >gi|294055214|ref|YP_003548872.1| ribosomal protein S3 [Coraliomargarita akajimensis DSM 45221] gi|293614547|gb|ADE54702.1| ribosomal protein S3 [Coraliomargarita akajimensis DSM 45221] Length = 210 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 95/207 (45%), Positives = 144/207 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRL V W+SRW+A ++ L ED IR +L+ L+ A V +I IER Sbjct: 1 MGQKTHPIGFRLAVTRDWDSRWYANKQDFPGFLKEDHTIRTFLEKKLRYASVPRIFIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG +++K++ +L+ ++ L + EV +P+++A L+A+++ Sbjct: 61 SGRIRVKIFTARPGVVIGRKGQELDKLKAELNKKVGKDVMLDIQEVKRPDLSAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMKRAVQ+ M GA+G+++ GRL GA+++RTE G+VPLQTLRA Sbjct: 121 ALQLERRIAFRRAMKRAVQTTMAMGAEGIRIQCGGRLGGADIARTEQQRMGKVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 +I YG + A T YG G+K ++ L DE Sbjct: 181 NISYGFSEASTVYGIIGVKCWICLPDE 207 >gi|262277100|ref|ZP_06054893.1| ribosomal protein S3 [alpha proteobacterium HIMB114] gi|262224203|gb|EEY74662.1| ribosomal protein S3 [alpha proteobacterium HIMB114] Length = 225 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 108/205 (52%), Positives = 150/205 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL +N TW+S WFA+ YG L ED KIR+Y+ +K +GV+KILIER Sbjct: 1 MGQKVNPIGIRLKINRTWDSVWFAKKQNYGTYLIEDFKIRKYINKTIKNSGVSKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K C + +Y++RPG +IGKKG+DIEKI+ +S +T E+ +++ E+ KPE+++ L+A++I Sbjct: 61 SKKCVVTIYTSRPGFVIGKKGSDIEKIKNNISKITIDEVSVNIKEIRKPELDSYLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV +R+AMKRA+ SA+R GA G+KV SGRL G E++RTE EG +PL TLRA Sbjct: 121 AQQLEKRVAYRKAMKRAMSSALRLGAKGIKVTVSGRLGGNEIARTEWLREGSIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +DY A A T YG G+KV++ Sbjct: 181 DVDYAEAEASTTYGIIGVKVWIYKG 205 >gi|212704589|ref|ZP_03312717.1| hypothetical protein DESPIG_02651 [Desulfovibrio piger ATCC 29098] gi|212671988|gb|EEB32471.1| hypothetical protein DESPIG_02651 [Desulfovibrio piger ATCC 29098] Length = 213 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 113/208 (54%), Positives = 146/208 (70%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y A + ED KIR Y++ L AG+AKI IER Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKDYPAFVFEDSKIRAYVKKLLYHAGLAKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE+ A L+A++I Sbjct: 60 GGKIRLILSTARPGIVIGRKGVEIEKLRGDLRQKFGREFSLEVNEIRRPEVEAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR V A +FG +G+KV SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWIYKGEIL 207 >gi|256618374|ref|ZP_05475220.1| ribosomal protein S3 [Enterococcus faecalis ATCC 4200] gi|256597901|gb|EEU17077.1| ribosomal protein S3 [Enterococcus faecalis ATCC 4200] Length = 218 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W ++W+A EY LHEDL+IR+++ L A V+ I IER Sbjct: 1 MGQKVHPIGMRVGIIRDWAAKWYAE-KEYAEFLHEDLRIRKFIATKLADAAVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218 >gi|319789244|ref|YP_004150877.1| ribosomal protein S3 [Thermovibrio ammonificans HB-1] gi|317113746|gb|ADU96236.1| ribosomal protein S3 [Thermovibrio ammonificans HB-1] Length = 232 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 105/227 (46%), Positives = 158/227 (69%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK++P+ FRLG+ W S+W + EY LHEDLKIR+ ++ AG+A+I IER Sbjct: 1 MGQKVHPVGFRLGITKDWESKWVTKKKGEYVHNLHEDLKIRDLIKKKYYHAGIARIDIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T + I +++ARPGL+I +KG +++ +R+ L +T +++++ EV P++NA L+A++ Sbjct: 61 TPERINIRIWAARPGLLIARKGAEVKALRRFLEELTGKNVYINIEEVKYPQLNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLERRV FRRAMKR + AM+ GA G+KV+ +GRL GA+++R E Y EGRVPLQT+R Sbjct: 121 VAQQLERRVAFRRAMKRVIADAMKAGAKGIKVMCAGRLGGADMARKEWYREGRVPLQTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYGTA+A+T YG G+KV++ D D + + V+++ Sbjct: 181 ADIDYGTAIAKTKYGVIGVKVWIYKGDVYKDETEELLKKIEKEVKQE 227 >gi|289641160|ref|ZP_06473328.1| ribosomal protein S3 [Frankia symbiont of Datisca glomerata] gi|289509101|gb|EFD30032.1| ribosomal protein S3 [Frankia symbiont of Datisca glomerata] Length = 335 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 150/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 +IDYG A T +G G+KV++ D V Sbjct: 180 NIDYGFYEARTTFGRIGVKVWIYKGDVVQSRAEREAQE 217 >gi|167771261|ref|ZP_02443314.1| hypothetical protein ANACOL_02619 [Anaerotruncus colihominis DSM 17241] gi|167666512|gb|EDS10642.1| hypothetical protein ANACOL_02619 [Anaerotruncus colihominis DSM 17241] Length = 229 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 8/229 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA+ +G +L ED K+R++L+ L AG+ KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDDAFGDILVEDYKLRKFLKKTLYDAGIPKIEIERD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--------EIHLSVNEVPKPEIN 112 RI V+ +RPG++IGK G +IEK+R++ M N ++ ++V E+ +P+ N Sbjct: 61 ATRVRIHVHCSRPGIVIGKGGAEIEKVRRQCDAMINKGKADADKRQVFINVVEIKQPDKN 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+A+SIA QLE RV FRRAMK+A+ AM+FGA G+KV SGRL GAE++R+E Y EG Sbjct: 121 AQLVAESIASQLEARVSFRRAMKQAIGRAMKFGAKGIKVAVSGRLGGAEIARSEHYHEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +PLQT+RA IDYG A A T YG G+KV++ + + D+ ++ Sbjct: 181 IPLQTIRADIDYGFAEANTTYGRIGVKVWIYAGEVLGDAKRPRREGGNK 229 >gi|255526584|ref|ZP_05393491.1| ribosomal protein S3 [Clostridium carboxidivorans P7] gi|296187272|ref|ZP_06855668.1| ribosomal protein S3 [Clostridium carboxidivorans P7] gi|255509692|gb|EET86025.1| ribosomal protein S3 [Clostridium carboxidivorans P7] gi|296048143|gb|EFG87581.1| ribosomal protein S3 [Clostridium carboxidivorans P7] Length = 223 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 97/220 (44%), Positives = 142/220 (64%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIRE+++ AGV+KI IER Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANKKNFADNLVEDNKIREFVKAKTAAAGVSKIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +++A+PG++IGK G+ I ++ L + + I +++ EV E +A L+A+S Sbjct: 61 AKRVKLNIFTAKPGMVIGKGGSGINALKASLQKIITDKNILINIVEVKSAEGDAQLMAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMKTGVKGVKTSCSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV+V + + E Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYRGEILPVKKVAQNQEE 220 >gi|29831475|ref|NP_826109.1| 30S ribosomal protein S3 [Streptomyces avermitilis MA-4680] gi|61215744|sp|Q82DN9|RS3_STRAW RecName: Full=30S ribosomal protein S3 gi|29608590|dbj|BAC72644.1| putative ribosomal protein S3 [Streptomyces avermitilis MA-4680] Length = 275 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|225027484|ref|ZP_03716676.1| hypothetical protein EUBHAL_01740 [Eubacterium hallii DSM 3353] gi|224955219|gb|EEG36428.1| hypothetical protein EUBHAL_01740 [Eubacterium hallii DSM 3353] Length = 220 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 95/214 (44%), Positives = 146/214 (68%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+SRW+A ++ L ED KIR+Y++ L AG+++ IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAE-KDFADNLVEDDKIRKYIKNRLYSAGISRTEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK--PEINATLIAQ 118 +II+++A+PG++IG+ G+ I++++K+L +T ++ + + EV + + +A L+A+ Sbjct: 60 SDRVKIIIHTAKPGIVIGRGGSAIDELKKELEKLTGKKLIIEIKEVKRFDVDKDAQLVAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IAQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTL Sbjct: 120 NIAQQLENRISFRRAMKSCMQRTMRNGALGIKTSCSGRLGGADMARTEFYSEGTIPLQTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 RA+IDYG A A T YG G+KV+V + + + Sbjct: 180 RANIDYGFAEANTTYGKVGVKVWVYHGEVLPTKE 213 >gi|157737009|ref|YP_001489692.1| 30S ribosomal protein S3 [Arcobacter butzleri RM4018] gi|315636201|ref|ZP_07891455.1| 30S ribosomal protein S3 [Arcobacter butzleri JV22] gi|189044982|sp|A8ESU9|RS3_ARCB4 RecName: Full=30S ribosomal protein S3 gi|157698863|gb|ABV67023.1| 30S ribosomal protein S3 [Arcobacter butzleri RM4018] gi|315479562|gb|EFU70241.1| 30S ribosomal protein S3 [Arcobacter butzleri JV22] Length = 234 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 118/225 (52%), Positives = 156/225 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + A + ED KIR+Y++ L AG+A+ ++ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPKFETMPANVAEDDKIRKYVKKELYYAGIAQTVVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG D+EK++ LS + EI +++ E KP+I+A L A+++ Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKDALSKLVGKEIAVNIKEERKPQISAQLSAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR +Q+A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AQQLERRVAFRRAMKRVMQNALKGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A T YG GIKV++ + ++ T A E K Sbjct: 181 RIDYGFAEAHTTYGCIGIKVWIFKGEVLAKGIPTEKAEETTSKPK 225 >gi|14278532|pdb|1I94|C Chain C, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278553|pdb|1I95|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278574|pdb|1I96|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278596|pdb|1I97|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|149241277|pdb|2E5L|C Chain C, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction gi|226887631|pdb|2ZM6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Length = 238 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 100/214 (46%), Positives = 139/214 (64%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 +Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+ Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A+A T YG G+K Y+ L + + Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKA 214 >gi|260435557|ref|ZP_05789527.1| ribosomal protein S3 [Synechococcus sp. WH 8109] gi|260413431|gb|EEX06727.1| ribosomal protein S3 [Synechococcus sp. WH 8109] Length = 242 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 97/220 (44%), Positives = 138/220 (62%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKNYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTIGDSSRQVRINVVEVERVDGDAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY T VA T YG GIKV+V + +S+ +P Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLSEQAQPMPV 220 >gi|224437289|ref|ZP_03658261.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818] gi|313143744|ref|ZP_07805937.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818] gi|313128775|gb|EFR46392.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818] Length = 235 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 109/226 (48%), Positives = 154/226 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W+SRWF+ + + ED KIR++L+ + AGV++I+IER Sbjct: 1 MGQKVNPIGLRLGINRNWSSRWFSVSQATPSNILEDHKIRKFLKREMYYAGVSEIIIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ V ++RPGLIIGKKG DI+K ++ L + N E+ +++ E +P+ NA L A++I Sbjct: 61 ANKIRVTVVASRPGLIIGKKGVDIDKHKEALKKILNKEVFINIKEAKRPQANAQLAAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAAMKAGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G+KV++ + + E + +K+ Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFKGEVLHKGIMPEKREESKGGDKE 226 >gi|270157904|ref|ZP_06186561.1| ribosomal protein S3 [Legionella longbeachae D-4968] gi|289163836|ref|YP_003453974.1| 30S ribosomal protein S3 [Legionella longbeachae NSW150] gi|269989929|gb|EEZ96183.1| ribosomal protein S3 [Legionella longbeachae D-4968] gi|288857009|emb|CBJ10823.1| 30S ribosomal protein S3 [Legionella longbeachae NSW150] Length = 218 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ WNS+WFA Y L +D+K+R L+ L A V+KILIER Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFAGKK-YAEFLIQDIKLRTELKKKLMAAAVSKILIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 N + + +ARPG+IIGKKG IE +R ++S+ +HL++ E+ KPE++ATL+A+SI Sbjct: 60 ANNAVVTILTARPGIIIGKKGGGIEALRAEISSKLGVPVHLNIEEIKKPELDATLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMKRAV A++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA Sbjct: 120 AQQLEQRVMFRRAMKRAVTGALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA ++T YG G+KV++ + + + +A+ Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIYKGEVLPQKKRSTDSAQ 218 >gi|227505210|ref|ZP_03935259.1| 30S ribosomal protein S3 [Corynebacterium striatum ATCC 6940] gi|227198184|gb|EEI78232.1| 30S ribosomal protein S3 [Corynebacterium striatum ATCC 6940] Length = 248 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 104/215 (48%), Positives = 151/215 (70%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + WFA +Y + ED+KIR++L+ L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRQFLEKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQS+ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA A T +G GIKV++ D V + Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214 >gi|239905864|ref|YP_002952603.1| 30S ribosomal protein S3 [Desulfovibrio magneticus RS-1] gi|259495243|sp|C4XLX9|RS3_DESMR RecName: Full=30S ribosomal protein S3 gi|239795728|dbj|BAH74717.1| 30S ribosomal protein S3 [Desulfovibrio magneticus RS-1] Length = 213 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 110/215 (51%), Positives = 155/215 (72%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y + ED KIR++++ L AG++KI IER Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPEFVFEDNKIRKFVKKSLYHAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KGT+IEK+R L + E + VNE+ +PEI+A L+A++I Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFSREFTVEVNEIRRPEIDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A+A+T YG G+KV++ + E+ D + Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213 >gi|163791672|ref|ZP_02186067.1| 30S ribosomal protein S3 [Carnobacterium sp. AT7] gi|159873051|gb|EDP67160.1| 30S ribosomal protein S3 [Carnobacterium sp. AT7] Length = 218 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP R+G+ W+S+W+A ++ LHED+ IREY+ L A V+K+ IER Sbjct: 1 MGQKINPTGLRVGIIRDWDSKWYAE-KDFANYLHEDIAIREYIAKKLSDASVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++A+PG++IGK G++++ +RKKL+++T +H+++ E+ +P+++A L+ + I Sbjct: 60 ANRVNVSVHTAKPGMVIGKGGSEVDALRKKLNDLTGKRVHINIVEIKRPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E + EG VPL TLRA Sbjct: 120 ARQLESRVAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSETHSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YG GIKV++ + + + + Sbjct: 180 DIDYAWEEAATTYGKLGIKVWIYRGEVLPTKKNIEKGGK 218 >gi|315605905|ref|ZP_07880936.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312187|gb|EFU60273.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 180 str. F0310] Length = 269 Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 153/226 (67%), Gaps = 5/226 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++ Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLRA+IDYG A T +G G+KV++ D +++ + AEH Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-LTEREFARQQAEHAQ 225 >gi|309389927|gb|ADO77807.1| SSU ribosomal protein S3P [Halanaerobium praevalens DSM 2228] Length = 214 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 148/214 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP R+GV W+++W+A +Y LL+ED +IR +++ + +AG++K++IER Sbjct: 1 MGNKINPHGLRVGVIKDWDAKWYADKKDYSKLLNEDREIRSHVKEKMFEAGISKVVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ VY+ARPG++IG+ G+++E +R + +T + ++V EV PE NA L+A++I Sbjct: 61 ANRLKLDVYTARPGMVIGRGGSEVEALRNDVEALTGKTVQINVVEVKDPEKNAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMK+A+ AMR G +G KV +SGRL GAE++R E Y EG VP+ TLRA Sbjct: 121 ASQLVRRVSFRRAMKQAMNRAMRMGVEGFKVQSSGRLGGAEMARREGYSEGSVPMHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A T YG+ G+KV+++ + + + D Sbjct: 181 DIDYGFAEAATTYGTIGVKVWINKGEILPEIDDE 214 >gi|325294402|ref|YP_004280916.1| ribosomal protein S3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064850|gb|ADY72857.1| ribosomal protein S3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 232 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 107/227 (47%), Positives = 157/227 (69%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK++PI FRLG+ W ++W + +Y LHEDLKIR+ ++ AG+A+I IER Sbjct: 1 MGQKVHPIGFRLGITKDWEAKWVVKEKGKYVKFLHEDLKIRDLIKKKYYHAGIARIDIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T I +++ARPGL+I +KG +++ +RK L +T +++++ EV P++NA L+A++ Sbjct: 61 TLDRINIRIWAARPGLLIARKGAEVKALRKYLEELTGKSVYINIEEVKYPQLNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLERRV FRRAMKR + AM+ GA G+KV +GRL GA+++RTE Y EGRVPLQT+R Sbjct: 121 VAQQLERRVAFRRAMKRVIADAMKAGAKGIKVQCAGRLGGADMARTEWYREGRVPLQTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYGTA+A+T YG G+KV++ D D I + V+++ Sbjct: 181 ADIDYGTAIAKTKYGVIGVKVWIYKGDVYKDETEEILKKIEKEVKQE 227 >gi|294630899|ref|ZP_06709459.1| ribosomal protein S3 [Streptomyces sp. e14] gi|292834232|gb|EFF92581.1| ribosomal protein S3 [Streptomyces sp. e14] Length = 276 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|255282611|ref|ZP_05347166.1| ribosomal protein S3 [Bryantella formatexigens DSM 14469] gi|255266904|gb|EET60109.1| ribosomal protein S3 [Bryantella formatexigens DSM 14469] Length = 214 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 145/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A E+ L ED KIR YL+ L AGV++I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAES-EFADYLVEDNKIRTYLKKKLYSAGVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G++IEK++ ++ +T ++ + + EV +P+ +A L+A++I Sbjct: 60 SGRVKVIIYTAKPGVVIGKGGSEIEKVKAEVQKLTKEKLLVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMGRTMKTGAKGIKAAVSGRLGGADIARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYNGEILPTK 210 >gi|150392154|ref|YP_001322203.1| ribosomal protein S3 [Alkaliphilus metalliredigens QYMF] gi|189044985|sp|A6TWH6|RS3_ALKMQ RecName: Full=30S ribosomal protein S3 gi|149952016|gb|ABR50544.1| ribosomal protein S3 [Alkaliphilus metalliredigens QYMF] Length = 234 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 145/225 (64%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++W+A ++ L ED IR++++ L +G+ KI ER Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYANKRDFSDYLIEDHSIRKFVKKKLFLSGINKIETERA 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N +I V++A+PG++IGK G +E++RK+L MT + ++V EV +PE+ + L+A++ Sbjct: 61 ANNRVKINVHTAKPGMVIGKGGIGVEELRKELEKMTKKTVIVNVVEVKRPEVESQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA LERRV FRRAMK+A+Q AMR GA G+KV +GRL GA+++RTE Y EG VPL TLR Sbjct: 121 IAFSLERRVSFRRAMKQAMQRAMRAGAKGIKVSTAGRLGGADMARTEGYSEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 A IDYG A A+T YG GIKV++ + + Sbjct: 181 ADIDYGFAEADTTYGKLGIKVWIYKGEILPTKGKNEETNNETADN 225 >gi|302558988|ref|ZP_07311330.1| ribosomal protein S3 [Streptomyces griseoflavus Tu4000] gi|302476606|gb|EFL39699.1| ribosomal protein S3 [Streptomyces griseoflavus Tu4000] Length = 275 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|261364861|ref|ZP_05977744.1| ribosomal protein S3 [Neisseria mucosa ATCC 25996] gi|288566910|gb|EFC88470.1| ribosomal protein S3 [Neisseria mucosa ATCC 25996] Length = 231 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ++DY T+ A T YG G+KV+V V S P E + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGSV--KTSAKPEHEKKQRK 222 >gi|213964938|ref|ZP_03393137.1| ribosomal protein S3 [Corynebacterium amycolatum SK46] gi|213952474|gb|EEB63857.1| ribosomal protein S3 [Corynebacterium amycolatum SK46] Length = 246 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 102/228 (44%), Positives = 153/228 (67%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG++ W SRW+A +Y L ED+KIR+ L L++AG++ ++IERT Sbjct: 1 MGQKIHPHGLRLGISSDWKSRWYAD-KQYADYLAEDIKIRDLLSTGLERAGISDVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + +A L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDADAKLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR Sbjct: 120 AEQLANRVAFRRAMRKAIQSAMRQPHVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 A IDYGT A T +G G+KV++ D + + A + + + Sbjct: 180 AEIDYGTHEAHTTFGRIGVKVWIYKGDVIGGRRESEINAGNARQRRGN 227 >gi|329945690|ref|ZP_08293420.1| ribosomal protein S3 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528498|gb|EGF55472.1| ribosomal protein S3 [Actinomyces sp. oral taxon 170 str. F0386] Length = 222 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA+IDYG A+T +G G+KV++ D +++ + AE Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGD-ITEREFARQQAE 222 >gi|317153952|ref|YP_004122000.1| 30S ribosomal protein S3 [Desulfovibrio aespoeensis Aspo-2] gi|316944203|gb|ADU63254.1| ribosomal protein S3 [Desulfovibrio aespoeensis Aspo-2] Length = 213 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 151/208 (72%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRW++ +Y A + +D +IR++++ L QAG+A++ IER Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWYS-KKDYPAFVLQDDQIRKFVKKKLFQAGIARLEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KG +IEK+R +L N +E + VNE+ +PE+ A L+A+SI Sbjct: 60 GGKIRLIIHTARPGIVIGRKGVEIEKLRDELRNKYQTEFTIEVNEIRRPEVEAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR V A +FGA+G+KV +GRL GAE++R E Y +GRVPL TLRA Sbjct: 120 AQQLERRIAFRRAMKRTVGLARKFGAEGIKVACAGRLAGAEIARGEWYRDGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEAHTTYGVIGVKVWIFKGEIL 207 >gi|154483181|ref|ZP_02025629.1| hypothetical protein EUBVEN_00882 [Eubacterium ventriosum ATCC 27560] gi|149735989|gb|EDM51875.1| hypothetical protein EUBVEN_00882 [Eubacterium ventriosum ATCC 27560] Length = 215 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 145/212 (68%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED +IR YL+ L GV+KI IER+ Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLIEDYEIRTYLKKKLYSTGVSKIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ VY+A+PGL+IGK G +IEK++ ++ MT+ ++ + V +V +P+ +A L+A++I Sbjct: 60 SDRVRVNVYTAKPGLVIGKGGAEIEKVKAEVQKMTDKKLFMDVKDVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AAQLENRVSFRRAMKSCMSRTMKTGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A+T YG G+KV++ + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYNGEILPTRE 211 >gi|239929508|ref|ZP_04686461.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672] gi|291437833|ref|ZP_06577223.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672] gi|291340728|gb|EFE67684.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672] Length = 274 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|59802154|ref|YP_208866.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA 1090] gi|194099929|ref|YP_002003067.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae NCCP11945] gi|239997932|ref|ZP_04717856.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02] gi|240015090|ref|ZP_04722003.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI18] gi|240017539|ref|ZP_04724079.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA6140] gi|240081682|ref|ZP_04726225.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19] gi|240113960|ref|ZP_04728450.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11] gi|240116694|ref|ZP_04730756.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18] gi|240118916|ref|ZP_04732978.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1] gi|240122162|ref|ZP_04735124.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID24-1] gi|240124454|ref|ZP_04737410.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332] gi|240124677|ref|ZP_04737563.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679] gi|240129130|ref|ZP_04741791.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035] gi|254494715|ref|ZP_05107886.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 1291] gi|260439547|ref|ZP_05793363.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2] gi|268593782|ref|ZP_06127949.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02] gi|268597779|ref|ZP_06131946.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19] gi|268600024|ref|ZP_06134191.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11] gi|268602362|ref|ZP_06136529.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18] gi|268604625|ref|ZP_06138792.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1] gi|268683083|ref|ZP_06149945.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332] gi|268683251|ref|ZP_06150113.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679] gi|268687513|ref|ZP_06154375.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035] gi|291042783|ref|ZP_06568524.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2] gi|293398196|ref|ZP_06642401.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae F62] gi|75507299|sp|Q5F5T3|RS3_NEIG1 RecName: Full=30S ribosomal protein S3 gi|226697736|sp|B4RQY4|RS3_NEIG2 RecName: Full=30S ribosomal protein S3 gi|59719049|gb|AAW90454.1| putative 30S ribosomal subunit protein S3 [Neisseria gonorrhoeae FA 1090] gi|193935219|gb|ACF31043.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae NCCP11945] gi|226513755|gb|EEH63100.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 1291] gi|268547171|gb|EEZ42589.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02] gi|268551567|gb|EEZ46586.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19] gi|268584155|gb|EEZ48831.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11] gi|268586493|gb|EEZ51169.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18] gi|268588756|gb|EEZ53432.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1] gi|268623367|gb|EEZ55767.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332] gi|268623535|gb|EEZ55935.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679] gi|268627797|gb|EEZ60197.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035] gi|291013217|gb|EFE05183.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2] gi|291611459|gb|EFF40529.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae F62] gi|317165382|gb|ADV08923.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae TCDC-NG08107] Length = 230 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 108/227 (47%), Positives = 160/227 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + IH+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPIHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DY T+ A T YG G+KV+V + S + + + +++ Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227 >gi|153824145|ref|ZP_01976812.1| ribosomal protein S3 [Vibrio cholerae B33] gi|126518331|gb|EAZ75554.1| ribosomal protein S3 [Vibrio cholerae B33] Length = 199 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 104/199 (52%), Positives = 142/199 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIK 199 IDY T+ A T YG G+K Sbjct: 181 DIDYATSSAHTTYGVIGVK 199 >gi|258455399|ref|ZP_05703359.1| 30S ribosomal protein S3 [Staphylococcus aureus A5937] gi|257862610|gb|EEV85378.1| 30S ribosomal protein S3 [Staphylococcus aureus A5937] Length = 219 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A+T YG G+KV++ + + + Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKN 211 >gi|15617112|ref|NP_240325.1| 30S ribosomal protein S3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219682419|ref|YP_002468803.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11387061|sp|P57585|RS3_BUCAI RecName: Full=30S ribosomal protein S3 gi|254764518|sp|B8D843|RS3_BUCAT RecName: Full=30S ribosomal protein S3 gi|25294467|pir||C84990 30S ribosomal protein S3 [imported] - Buchnera sp. (strain APS) gi|10039177|dbj|BAB13211.1| 30S ribosomal protein S3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622152|gb|ACL30308.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086817|gb|ADP66898.1| 30S ribosomal protein S3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 233 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 152/212 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDY + A T YG G+KV++ + + + Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212 >gi|300857768|ref|YP_003782751.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis FRC41] gi|300685222|gb|ADK28144.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis FRC41] gi|302205506|gb|ADL09848.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis C231] gi|302330061|gb|ADL20255.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis 1002] gi|308275742|gb|ADO25641.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis I19] Length = 248 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 105/222 (47%), Positives = 149/222 (67%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W S W+A Y + ED+++REYL L +AG+A I+IERT Sbjct: 1 MGQKIHPHGLRLGITSEWKSHWYAD-RNYSEYVAEDIRVREYLVKTLDRAGIADIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G++ +++RK+L +T ++ L++ EV + NA L+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGSEADRLRKELEKLTGKQVALNILEVKNIDANAQLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYGT A T +G G+KV++ D V + A Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAE 221 >gi|225387231|ref|ZP_03756995.1| hypothetical protein CLOSTASPAR_00983 [Clostridium asparagiforme DSM 15981] gi|225046710|gb|EEG56956.1| hypothetical protein CLOSTASPAR_00983 [Clostridium asparagiforme DSM 15981] Length = 218 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNIRKFLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+A+PG++IGK G +IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKLKKEVQKLTDKKLFIDIKEIKRPDKDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R FRRAMK + M+ G G+K GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRTSFRRAMKSTMGRTMKTGVKGIKTAVGGRLGGADIARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210 >gi|218135275|ref|ZP_03464079.1| hypothetical protein BACPEC_03180 [Bacteroides pectinophilus ATCC 43243] gi|217990660|gb|EEC56671.1| hypothetical protein BACPEC_03180 [Bacteroides pectinophilus ATCC 43243] Length = 218 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A + L ED IR++L+ L AG+++I +ERT Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAED-NFADNLVEDYNIRKFLKKRLYSAGISRIEMERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+++A+PG++IGK G +IE ++K + +T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 TDRLKIIIHTAKPGIVIGKGGAEIENLKKDVQKLTDKKLSIDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y +G +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMGRTMKAGAKGIKTSCSGRLGGADMARTEFYSDGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 I+YG A A T YG G+KV++ + + Sbjct: 180 DINYGFAEANTTYGKVGVKVWIYEGEVLPTK 210 >gi|15925234|ref|NP_372768.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu50] gi|15927824|ref|NP_375357.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus N315] gi|21283892|ref|NP_646980.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MW2] gi|49484460|ref|YP_041684.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49487026|ref|YP_044247.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82751833|ref|YP_417574.1| 30S ribosomal protein S3 [Staphylococcus aureus RF122] gi|87160014|ref|YP_494833.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196156|ref|YP_500973.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268684|ref|YP_001247627.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH9] gi|150394749|ref|YP_001317424.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH1] gi|151222358|ref|YP_001333180.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980559|ref|YP_001442818.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu3] gi|253317004|ref|ZP_04840217.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729910|ref|ZP_04864075.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734347|ref|ZP_04868512.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TCH130] gi|255007024|ref|ZP_05145625.2| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257423729|ref|ZP_05600158.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257426407|ref|ZP_05602809.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429046|ref|ZP_05605433.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 68-397] gi|257431692|ref|ZP_05608055.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus E1410] gi|257434653|ref|ZP_05610704.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus M876] gi|257794590|ref|ZP_05643569.1| 30S ribosomal protein S3 [Staphylococcus aureus A9781] gi|258408808|ref|ZP_05681092.1| 30S ribosomal protein S3 [Staphylococcus aureus A9763] gi|258422407|ref|ZP_05685319.1| SSU ribosomal protein S3 [Staphylococcus aureus A9719] gi|258422691|ref|ZP_05685596.1| SSU ribosomal protein S3 [Staphylococcus aureus A9635] gi|258439796|ref|ZP_05690542.1| SSU ribosomal protein S3P [Staphylococcus aureus A9299] gi|258442648|ref|ZP_05691208.1| ribosomal protein S3 [Staphylococcus aureus A8115] gi|258446653|ref|ZP_05694808.1| 30S ribosomal protein S3 [Staphylococcus aureus A6300] gi|258450229|ref|ZP_05698321.1| ribosomal protein S3 [Staphylococcus aureus A6224] gi|258450761|ref|ZP_05698820.1| 30S ribosomal protein S3 [Staphylococcus aureus A5948] gi|262048508|ref|ZP_06021392.1| 30S ribosomal protein S3 [Staphylococcus aureus D30] gi|262052033|ref|ZP_06024244.1| 30S ribosomal protein S3 [Staphylococcus aureus 930918-3] gi|269203877|ref|YP_003283146.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ED98] gi|282893682|ref|ZP_06301914.1| 30S ribosomal protein S3 [Staphylococcus aureus A8117] gi|282902147|ref|ZP_06310040.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus C160] gi|282906587|ref|ZP_06314435.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909557|ref|ZP_06317368.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911804|ref|ZP_06319600.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915093|ref|ZP_06322870.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M899] gi|282917589|ref|ZP_06325341.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus D139] gi|282920819|ref|ZP_06328537.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C427] gi|282922113|ref|ZP_06329809.1| 30S ribosomal protein S3 [Staphylococcus aureus A9765] gi|282925724|ref|ZP_06333372.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C101] gi|282926790|ref|ZP_06334417.1| 30S ribosomal protein S3 [Staphylococcus aureus A10102] gi|283767336|ref|ZP_06340251.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus H19] gi|283959022|ref|ZP_06376463.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus A017934/97] gi|284025270|ref|ZP_06379668.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 132] gi|293497497|ref|ZP_06665351.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 58-424] gi|293511072|ref|ZP_06669769.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus M809] gi|293549678|ref|ZP_06672350.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M1015] gi|294848777|ref|ZP_06789522.1| 30S ribosomal protein S3 [Staphylococcus aureus A9754] gi|295404920|ref|ZP_06814733.1| 30S ribosomal protein S3 [Staphylococcus aureus A8819] gi|295428827|ref|ZP_06821451.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275965|ref|ZP_06858472.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MR1] gi|297209943|ref|ZP_06926339.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297243978|ref|ZP_06927868.1| 30S ribosomal protein S3 [Staphylococcus aureus A8796] gi|297589687|ref|ZP_06948328.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MN8] gi|300910955|ref|ZP_07128405.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TCH70] gi|304379428|ref|ZP_07362163.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039503|sp|P66553|RS3_STAAN RecName: Full=30S ribosomal protein S3 gi|54039504|sp|P66554|RS3_STAAW RecName: Full=30S ribosomal protein S3 gi|54041960|sp|P66552|RS3_STAAM RecName: Full=30S ribosomal protein S3 gi|61215543|sp|Q6G777|RS3_STAAS RecName: Full=30S ribosomal protein S3 gi|61215547|sp|Q6GEI9|RS3_STAAR RecName: Full=30S ribosomal protein S3 gi|91207841|sp|Q2YYQ2|RS3_STAAB RecName: Full=30S ribosomal protein S3 gi|123003431|sp|Q2FW12|RS3_STAA8 RecName: Full=30S ribosomal protein S3 gi|123763261|sp|Q2FEP5|RS3_STAA3 RecName: Full=30S ribosomal protein S3 gi|171769947|sp|A7X5F5|RS3_STAA1 RecName: Full=30S ribosomal protein S3 gi|172049042|sp|A6QJ86|RS3_STAAE RecName: Full=30S ribosomal protein S3 gi|13702044|dbj|BAB43336.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus N315] gi|14248017|dbj|BAB58406.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu50] gi|21205334|dbj|BAB96028.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MW2] gi|49242589|emb|CAG41310.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49245469|emb|CAG43946.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82657364|emb|CAI81805.1| 30S ribosomal protein S3 [Staphylococcus aureus RF122] gi|87125988|gb|ABD20502.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203714|gb|ABD31524.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741753|gb|ABQ50051.1| SSU ribosomal protein S3P [Staphylococcus aureus subsp. aureus JH9] gi|149947201|gb|ABR53137.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH1] gi|150375158|dbj|BAF68418.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722694|dbj|BAF79111.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu3] gi|253726357|gb|EES95086.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727664|gb|EES96393.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TCH130] gi|257272747|gb|EEV04849.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257276038|gb|EEV07489.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279527|gb|EEV10114.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 68-397] gi|257282571|gb|EEV12703.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus E1410] gi|257285249|gb|EEV15365.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus M876] gi|257788562|gb|EEV26902.1| 30S ribosomal protein S3 [Staphylococcus aureus A9781] gi|257840491|gb|EEV64951.1| 30S ribosomal protein S3 [Staphylococcus aureus A9763] gi|257841838|gb|EEV66275.1| SSU ribosomal protein S3 [Staphylococcus aureus A9719] gi|257847102|gb|EEV71111.1| SSU ribosomal protein S3 [Staphylococcus aureus A9635] gi|257847572|gb|EEV71574.1| SSU ribosomal protein S3P [Staphylococcus aureus A9299] gi|257851769|gb|EEV75703.1| ribosomal protein S3 [Staphylococcus aureus A8115] gi|257854721|gb|EEV77669.1| 30S ribosomal protein S3 [Staphylococcus aureus A6300] gi|257856321|gb|EEV79230.1| ribosomal protein S3 [Staphylococcus aureus A6224] gi|257861544|gb|EEV84346.1| 30S ribosomal protein S3 [Staphylococcus aureus A5948] gi|259160088|gb|EEW45121.1| 30S ribosomal protein S3 [Staphylococcus aureus 930918-3] gi|259163366|gb|EEW47924.1| 30S ribosomal protein S3 [Staphylococcus aureus D30] gi|262076167|gb|ACY12140.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ED98] gi|269941833|emb|CBI50243.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TW20] gi|282312553|gb|EFB42957.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C101] gi|282315234|gb|EFB45618.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C427] gi|282318551|gb|EFB48909.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus D139] gi|282320814|gb|EFB51148.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M899] gi|282323500|gb|EFB53816.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326536|gb|EFB56838.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329486|gb|EFB59007.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282591241|gb|EFB96314.1| 30S ribosomal protein S3 [Staphylococcus aureus A10102] gi|282593581|gb|EFB98574.1| 30S ribosomal protein S3 [Staphylococcus aureus A9765] gi|282596606|gb|EFC01565.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus C160] gi|282763740|gb|EFC03868.1| 30S ribosomal protein S3 [Staphylococcus aureus A8117] gi|283461215|gb|EFC08299.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus H19] gi|283471466|emb|CAQ50677.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ST398] gi|283788614|gb|EFC27441.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus A017934/97] gi|285817906|gb|ADC38393.1| 30S ribosomal protein S3 [Staphylococcus aureus 04-02981] gi|290918725|gb|EFD95801.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M1015] gi|291096428|gb|EFE26686.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 58-424] gi|291466059|gb|EFF08588.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus M809] gi|294824156|gb|EFG40580.1| 30S ribosomal protein S3 [Staphylococcus aureus A9754] gi|294969865|gb|EFG45883.1| 30S ribosomal protein S3 [Staphylococcus aureus A8819] gi|295127176|gb|EFG56818.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885616|gb|EFH24553.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178756|gb|EFH38001.1| 30S ribosomal protein S3 [Staphylococcus aureus A8796] gi|297578198|gb|EFH96911.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MN8] gi|298695500|gb|ADI98722.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus ED133] gi|300887935|gb|EFK83130.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TCH70] gi|302333880|gb|ADL24073.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus JKD6159] gi|304341960|gb|EFM07864.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437345|gb|ADQ76416.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TCH60] gi|312830593|emb|CBX35435.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129676|gb|EFT85667.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus CGS03] gi|315193496|gb|EFU23892.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus CGS00] gi|315198226|gb|EFU28557.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus CGS01] gi|320140218|gb|EFW32077.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143488|gb|EFW35269.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA177] gi|323440076|gb|EGA97791.1| 30S ribosomal protein S3 [Staphylococcus aureus O11] gi|323442750|gb|EGB00376.1| 30S ribosomal protein S3 [Staphylococcus aureus O46] gi|329314927|gb|AEB89340.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus T0131] gi|329723700|gb|EGG60229.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21172] gi|329730267|gb|EGG66657.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21193] gi|329732065|gb|EGG68420.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21189] Length = 217 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens NRL30031/H210] gi|241759632|ref|ZP_04757733.1| ribosomal protein S3 [Neisseria flavescens SK114] gi|319639555|ref|ZP_07994302.1| 30S ribosomal protein S3 [Neisseria mucosa C102] gi|224952249|gb|EEG33458.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens NRL30031/H210] gi|241320004|gb|EER56385.1| ribosomal protein S3 [Neisseria flavescens SK114] gi|317399126|gb|EFV79800.1| 30S ribosomal protein S3 [Neisseria mucosa C102] Length = 230 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 107/222 (48%), Positives = 156/222 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEILKRDLQALMGVPVHVNIEEIRRPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 ++DY T+ A T YG G+KV+V + S + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHEKKQRKA 222 >gi|311896564|dbj|BAJ28972.1| putative ribosomal protein S3 [Kitasatospora setae KM-6054] Length = 277 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG++ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGISTDFKSRWYAD-KLYKDYVKEDVAIRRLMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + +KIR L +T ++ L++ EV PE++A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGNLEKLTGKQVQLNILEVKNPELDAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS M+ GA G+KV SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARSGNRPA 226 >gi|325068037|ref|ZP_08126710.1| ribosomal protein S3 [Actinomyces oris K20] Length = 218 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A+T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211 >gi|320533930|ref|ZP_08034500.1| ribosomal protein S3 [Actinomyces sp. oral taxon 171 str. F0337] gi|320133850|gb|EFW26228.1| ribosomal protein S3 [Actinomyces sp. oral taxon 171 str. F0337] Length = 215 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A+T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211 >gi|258591322|emb|CBE67621.1| 30S ribosomal subunit protein S3 [NC10 bacterium 'Dutch sediment'] Length = 235 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 111/229 (48%), Positives = 151/229 (65%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG W SRWFA Y LHEDLK R +++ + AGV+ I IER Sbjct: 1 MGQKVHPVGFRLGFIKPWRSRWFA-MKGYADALHEDLKFRRFIKERVYHAGVSGIDIERK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+++++ARPG+IIGKKG++++K++ LS MT I L + EV + E++A LIA+ I Sbjct: 60 ADQIRVVIHTARPGIIIGKKGSEVDKLKAALSGMTKKPIQLDIVEVRRAELDAQLIAEQI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RRV FRRAMK+ VQS+MR GA GV++ +GRL GAE++R E Y EGR+PL TLRA Sbjct: 120 ASQLMRRVAFRRAMKKTVQSSMRLGAQGVQIACAGRLAGAEIARREWYREGRMPLNTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVE 224 +IDYG A+T YG G+K +V + + D + IP A R Sbjct: 180 NIDYGFTQAKTTYGLIGVKCWVYHGEAMPDTLAAKQEREIPQAAPRRPR 228 >gi|303246999|ref|ZP_07333275.1| ribosomal protein S3 [Desulfovibrio fructosovorans JJ] gi|302491706|gb|EFL51589.1| ribosomal protein S3 [Desulfovibrio fructosovorans JJ] Length = 213 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 110/215 (51%), Positives = 156/215 (72%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y A + ED KIR++++ +L AG++KI IER Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPAFVFEDNKIRKFVKKNLYHAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KGT+IEK+R L E + VNE+ +PEI++ L+A++I Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFGREFTVEVNEIRRPEIDSQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A+A+T YG G+KV++ + E+ D + Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213 >gi|297571929|ref|YP_003697703.1| ribosomal protein S3 [Arcanobacterium haemolyticum DSM 20595] gi|296932276|gb|ADH93084.1| ribosomal protein S3 [Arcanobacterium haemolyticum DSM 20595] Length = 274 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ S+WFA G Y + ED+KIR ++ L++AG++++ Sbjct: 1 MGQKVNPTGFRLGITTEHRSKWFADSSKEGQRYRDYIEEDIKIRRKVENDLERAGISRVN 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IER + I +++ARPG++IG++G + +++R+ L +T + L++ EV PE +A L+ Sbjct: 61 IERRTERVVIDIHTARPGIVIGRRGAEADRLRQDLEKLTGKAVQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQCSGRLGGAEMSRAEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYRGDI 211 >gi|269792788|ref|YP_003317692.1| 30S ribosomal protein S3 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100423|gb|ACZ19410.1| ribosomal protein S3 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 223 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 94/222 (42%), Positives = 147/222 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ +RLGV W SRW+A Y LHEDL++RE+++ AG++++ IER Sbjct: 1 MGQKVHPVGYRLGVIYDWESRWYADKKTYAKNLHEDLELREWIKKRWGHAGISRVEIERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R V++ARPG++IGK G +I+ +R +L T + + +++ E+ P+ +A ++++ I Sbjct: 61 GNVMRFTVWTARPGVVIGKGGAEIQLVRDELQRKTGNRVMINIQEIKNPDADAQVVSEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+++ AM+ GA G+K+ SGRL GAE++R+E YLEG++PL TLRA Sbjct: 121 ASALERRVSFRRAMKQSIFRAMKAGAKGIKIQCSGRLGGAEIARSEWYLEGQLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 I YG +VA T YG G+KV++ + + + + A Sbjct: 181 DISYGYSVARTIYGVIGVKVWIYRGEVIGGAKAEPQVASRDR 222 >gi|164686533|ref|ZP_02210561.1| hypothetical protein CLOBAR_00100 [Clostridium bartlettii DSM 16795] gi|164604402|gb|EDQ97867.1| hypothetical protein CLOBAR_00100 [Clostridium bartlettii DSM 16795] Length = 262 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 109/220 (49%), Positives = 148/220 (67%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWF E+G+LL ED +IR +L+ L AGVAKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFTTDKKEFGSLLLEDHQIRTFLKERLYVAGVAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + RI ++ A+PG++IG G IE ++ +L MT + +++ EV + NA L+A++ Sbjct: 61 SANKIRIDLHVAKPGVVIGAAGAKIEALKAELEKMTKKTVIVNIIEVKGIDRNAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +ERRV FRRAMK+AVQ A++ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IALAIERRVAFRRAMKQAVQRALKSGAKGIKVAASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 + IDYG A A+T YG GIKV++ + + + P E Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEVLPTRNGVNPREE 220 >gi|282860816|ref|ZP_06269882.1| ribosomal protein S3 [Streptomyces sp. ACTE] gi|282564552|gb|EFB70088.1| ribosomal protein S3 [Streptomyces sp. ACTE] gi|320009096|gb|ADW03946.1| ribosomal protein S3 [Streptomyces flavogriseus ATCC 33331] Length = 278 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|69247175|ref|ZP_00604237.1| ribosomal protein S3 [Enterococcus faecium DO] gi|227550726|ref|ZP_03980775.1| ribosomal protein S3 [Enterococcus faecium TX1330] gi|257878731|ref|ZP_05658384.1| ribosomal protein S3 [Enterococcus faecium 1,230,933] gi|257881372|ref|ZP_05661025.1| ribosomal protein S3 [Enterococcus faecium 1,231,502] gi|257885640|ref|ZP_05665293.1| ribosomal protein S3 [Enterococcus faecium 1,231,501] gi|257888015|ref|ZP_05667668.1| ribosomal protein S3 [Enterococcus faecium 1,141,733] gi|257890590|ref|ZP_05670243.1| ribosomal protein S3 [Enterococcus faecium 1,231,410] gi|257893180|ref|ZP_05672833.1| ribosomal protein S3 [Enterococcus faecium 1,231,408] gi|257896366|ref|ZP_05676019.1| ribosomal protein S3 [Enterococcus faecium Com12] gi|257899340|ref|ZP_05678993.1| ribosomal protein S3 [Enterococcus faecium Com15] gi|258615205|ref|ZP_05712975.1| 30S ribosomal protein S3 [Enterococcus faecium DO] gi|260558293|ref|ZP_05830489.1| ribosomal protein S3 [Enterococcus faecium C68] gi|261206999|ref|ZP_05921688.1| ribosomal protein S3 [Enterococcus faecium TC 6] gi|293379452|ref|ZP_06625596.1| ribosomal protein S3 [Enterococcus faecium PC4.1] gi|293553885|ref|ZP_06674491.1| ribosomal protein S3 [Enterococcus faecium E1039] gi|293562952|ref|ZP_06677419.1| ribosomal protein S3 [Enterococcus faecium E1162] gi|293567925|ref|ZP_06679266.1| ribosomal protein S3 [Enterococcus faecium E1071] gi|293570690|ref|ZP_06681740.1| ribosomal protein S3 [Enterococcus faecium E980] gi|294615387|ref|ZP_06695260.1| ribosomal protein S3 [Enterococcus faecium E1636] gi|294618314|ref|ZP_06697895.1| ribosomal protein S3 [Enterococcus faecium E1679] gi|294621084|ref|ZP_06700275.1| ribosomal protein S3 [Enterococcus faecium U0317] gi|314937614|ref|ZP_07844940.1| ribosomal protein S3 [Enterococcus faecium TX0133a04] gi|314942887|ref|ZP_07849700.1| ribosomal protein S3 [Enterococcus faecium TX0133C] gi|314947977|ref|ZP_07851381.1| ribosomal protein S3 [Enterococcus faecium TX0082] gi|314950894|ref|ZP_07853963.1| ribosomal protein S3 [Enterococcus faecium TX0133A] gi|314991458|ref|ZP_07856935.1| ribosomal protein S3 [Enterococcus faecium TX0133B] gi|314995021|ref|ZP_07860141.1| ribosomal protein S3 [Enterococcus faecium TX0133a01] gi|68194940|gb|EAN09408.1| ribosomal protein S3 [Enterococcus faecium DO] gi|227180187|gb|EEI61159.1| ribosomal protein S3 [Enterococcus faecium TX1330] gi|257812959|gb|EEV41717.1| ribosomal protein S3 [Enterococcus faecium 1,230,933] gi|257817030|gb|EEV44358.1| ribosomal protein S3 [Enterococcus faecium 1,231,502] gi|257821496|gb|EEV48626.1| ribosomal protein S3 [Enterococcus faecium 1,231,501] gi|257824069|gb|EEV51001.1| ribosomal protein S3 [Enterococcus faecium 1,141,733] gi|257826950|gb|EEV53576.1| ribosomal protein S3 [Enterococcus faecium 1,231,410] gi|257829559|gb|EEV56166.1| ribosomal protein S3 [Enterococcus faecium 1,231,408] gi|257832931|gb|EEV59352.1| ribosomal protein S3 [Enterococcus faecium Com12] gi|257837252|gb|EEV62326.1| ribosomal protein S3 [Enterococcus faecium Com15] gi|260075467|gb|EEW63773.1| ribosomal protein S3 [Enterococcus faecium C68] gi|260078627|gb|EEW66329.1| ribosomal protein S3 [Enterococcus faecium TC 6] gi|291589510|gb|EFF21317.1| ribosomal protein S3 [Enterococcus faecium E1071] gi|291591761|gb|EFF23397.1| ribosomal protein S3 [Enterococcus faecium E1636] gi|291595408|gb|EFF26720.1| ribosomal protein S3 [Enterococcus faecium E1679] gi|291599320|gb|EFF30346.1| ribosomal protein S3 [Enterococcus faecium U0317] gi|291601937|gb|EFF32183.1| ribosomal protein S3 [Enterococcus faecium E1039] gi|291605078|gb|EFF34545.1| ribosomal protein S3 [Enterococcus faecium E1162] gi|291609162|gb|EFF38434.1| ribosomal protein S3 [Enterococcus faecium E980] gi|292641975|gb|EFF60141.1| ribosomal protein S3 [Enterococcus faecium PC4.1] gi|313590747|gb|EFR69592.1| ribosomal protein S3 [Enterococcus faecium TX0133a01] gi|313593938|gb|EFR72783.1| ribosomal protein S3 [Enterococcus faecium TX0133B] gi|313596903|gb|EFR75748.1| ribosomal protein S3 [Enterococcus faecium TX0133A] gi|313598359|gb|EFR77204.1| ribosomal protein S3 [Enterococcus faecium TX0133C] gi|313642991|gb|EFS07571.1| ribosomal protein S3 [Enterococcus faecium TX0133a04] gi|313645575|gb|EFS10155.1| ribosomal protein S3 [Enterococcus faecium TX0082] Length = 218 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFISTKLADAAVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T IH+++ E+ KP+++A L+ + I Sbjct: 60 TGRVNISIHTAKPGMVIGKGGSEVESLRKELNKLTGKRIHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARQLENRVAFRRAQKQAIQRSMRAGAQGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A+T YG G+KV++ + + +T + Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218 >gi|313667447|ref|YP_004047731.1| 30S ribosomal protein S3 [Neisseria lactamica ST-640] gi|309379153|emb|CBX22284.1| 30S ribosomal protein S3 [Neisseria lactamica Y92-1009] gi|313004909|emb|CBN86335.1| 30S ribosomal protein S3 [Neisseria lactamica 020-06] Length = 231 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 111/224 (49%), Positives = 159/224 (70%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++S+RPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I Sbjct: 61 AKSARITIHSSRPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ++DY T+ A T YG G+KV+V V S P E + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KASAKPEHEKKQRK 222 >gi|289548385|ref|YP_003473373.1| ribosomal protein S3 [Thermocrinis albus DSM 14484] gi|289182002|gb|ADC89246.1| ribosomal protein S3 [Thermocrinis albus DSM 14484] Length = 234 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 107/231 (46%), Positives = 159/231 (68%), Gaps = 4/231 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLG+ W S+W+A G +Y LLHEDLKI+ Y++ AG++++++ER Sbjct: 1 MGQKTHPIGFRLGIIKDWTSKWYAEGKDYTQLLHEDLKIKRYIKERYASAGISRVVVERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 + ++ + +ARPG+IIG+KG ++E+++K L M I ++V+EV PE++A L+A+ Sbjct: 61 AEKVKVRILAARPGIIIGRKGAEVEQLKKDLEKMAPGKIITITVDEVRTPELDAQLVAEE 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A++ GA GVKV GR+ GAEL+R E +L GR+PLQTLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKAGAKGVKVQVKGRIGGAELARAEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAAEH--RVVEKDS 227 A IDYG AVA+T YG G+KV++ D + + + E + EK++ Sbjct: 181 ADIDYGFAVAQTKYGVLGVKVWIYKGDILKGGKEEIVKKIEEDLKRAEKEA 231 >gi|261400058|ref|ZP_05986183.1| ribosomal protein S3 [Neisseria lactamica ATCC 23970] gi|269210284|gb|EEZ76739.1| ribosomal protein S3 [Neisseria lactamica ATCC 23970] Length = 231 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ++DY T+ A T YG G+KV+V V S P E + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KASAKPEHEKKQRK 222 >gi|331268419|ref|YP_004394911.1| 30S ribosomal protein S3 [Clostridium botulinum BKT015925] gi|329124969|gb|AEB74914.1| ribosomal protein S3 [Clostridium botulinum BKT015925] Length = 221 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR++++ AGVAK IERT Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANNQNFADNLIEDDKIRKFIKKKCFSAGVAKTEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K +I +++ +PG+IIGK G IE+++ ++ +M + +++ EV +PE +A L+A++ Sbjct: 61 PKRVKINIHTGKPGMIIGKGGKGIEELKSEILSMIKEKNVIINIVEVKRPETDAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+ +Q AMR+G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMRYGVKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A A+T YG G+KV++ + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYRGEVLPAKKVRTQEISQ 221 >gi|156743942|ref|YP_001434071.1| 30S ribosomal protein S3 [Roseiflexus castenholzii DSM 13941] gi|156235270|gb|ABU60053.1| ribosomal protein S3 [Roseiflexus castenholzii DSM 13941] Length = 260 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 150/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG W S+WFA Y LLHED+ +R+ + L+ AGVA+I IER+ Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RNYTELLHEDVMLRKIIAKELENAGVARIDIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++A+PG++IGK+G ++++R++L+ T ++ L++ E+ +PE+ A L+A+SI Sbjct: 60 ANKVEVTVHTAKPGIVIGKRGAKVDELREELARRTGKKVKLNIQEIHQPELEAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R +GRVPL TLRA Sbjct: 120 AEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSGRLAGAEMARIAWERDGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A T YG G+KV++ D D + + V + S Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGDVFPDQKGQLQPTQPVVAARSS 226 >gi|297159603|gb|ADI09315.1| 30S ribosomal protein S3 [Streptomyces bingchenggensis BCW-1] Length = 278 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A T +G G+KV++ D + ++ A R + S Sbjct: 180 NVDYGFFEARTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226 >gi|331702074|ref|YP_004399033.1| 30S ribosomal protein S3 [Lactobacillus buchneri NRRL B-30929] gi|329129417|gb|AEB73970.1| ribosomal protein S3 [Lactobacillus buchneri NRRL B-30929] Length = 221 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 94/219 (42%), Positives = 149/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP R+G+ W ++W+A G +Y A L EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGNKINPNGLRVGIIRDWEAKWYA-GKDYAAYLKEDLQIRKYIEKRLANASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ ++I Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVENLRKELNDLTGKRVHINIIEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++A+Q MR GA G+K +GRLNGA+++R E Y +G VPL TLRA Sbjct: 120 ARQLEGRVAFRRAMRQAMQRTMRSGAKGIKTQVAGRLNGADMARVESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YGS G+K ++ + + + AA+ Sbjct: 180 DIDYSWVEAFTTYGSIGVKTWIYRGEVLPEKPKDSNAAK 218 >gi|255067452|ref|ZP_05319307.1| ribosomal protein S3 [Neisseria sicca ATCC 29256] gi|261378047|ref|ZP_05982620.1| ribosomal protein S3 [Neisseria cinerea ATCC 14685] gi|298370585|ref|ZP_06981900.1| ribosomal protein S3 [Neisseria sp. oral taxon 014 str. F0314] gi|255048247|gb|EET43711.1| ribosomal protein S3 [Neisseria sicca ATCC 29256] gi|269145497|gb|EEZ71915.1| ribosomal protein S3 [Neisseria cinerea ATCC 14685] gi|298281195|gb|EFI22685.1| ribosomal protein S3 [Neisseria sp. oral taxon 014 str. F0314] Length = 231 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ++DY T+ A T YG G+KV+V V S P E + + Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KTSAKPEHEKKQRK 222 >gi|319938501|ref|ZP_08012895.1| 30S ribosomal protein S3 [Coprobacillus sp. 29_1] gi|319806417|gb|EFW03084.1| 30S ribosomal protein S3 [Coprobacillus sp. 29_1] Length = 217 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 100/214 (46%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ R+GVN WNSRW+A ++ +LLHED++IRE+L LK A VA I IER+ Sbjct: 1 MGQKVSPVGLRVGVNRDWNSRWYANDKDFASLLHEDIRIREFLNAKLKGAYVANIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I V+++RPG++IGK G ++ +RK+++ + ++ +++ E+ P++ A L+A Sbjct: 61 KNRVNIFVHTSRPGVVIGKDGEAVDALRKQVTKLVKDKQVFINIVEIKNPDVVAQLVANR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE R FR KRA+QSAMR GA G+K SGRL GA+++RTE Y EG VPL TLR Sbjct: 121 IAEQLENRASFRTVQKRAIQSAMRAGAKGIKTCVSGRLGGADMARTEGYSEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A IDY TA A+T YG G+KV++ + + Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPAKKK 214 >gi|242278664|ref|YP_002990793.1| 30S ribosomal protein S3 [Desulfovibrio salexigens DSM 2638] gi|259495241|sp|C6C191|RS3_DESAD RecName: Full=30S ribosomal protein S3 gi|242121558|gb|ACS79254.1| ribosomal protein S3 [Desulfovibrio salexigens DSM 2638] Length = 213 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 114/212 (53%), Positives = 153/212 (72%), Gaps = 2/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG W SRWF+ +Y A ++ED IR+Y++ + AGV+KI IER Sbjct: 1 MGQKVHPYGFRLGYTKNWLSRWFS-SKDYPAFVYEDDSIRKYVKEKIFHAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG+IIG+KG +IEK+R+ L N E L V+E+ +PE +A L+A++I Sbjct: 60 GGKIRLIIHTARPGIIIGRKGVEIEKLREDLRRKFNKEFALEVSEIRRPETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR V A +FGA+G+KV +GRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AQQLERRVAFRRAMKRIVGLARKFGAEGIKVACAGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYG A A T YG GIKV++ + E+ D + Sbjct: 180 DIDYGVARANTTYGVIGIKVWIF-KGEILDHE 210 >gi|182436621|ref|YP_001824340.1| 30S ribosomal protein S3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|239943583|ref|ZP_04695520.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998] gi|239990036|ref|ZP_04710700.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 11379] gi|291447050|ref|ZP_06586440.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998] gi|326777243|ref|ZP_08236508.1| ribosomal protein S3 [Streptomyces cf. griseus XylebKG-1] gi|226697762|sp|B1W401|RS3_STRGG RecName: Full=30S ribosomal protein S3 gi|178465137|dbj|BAG19657.1| putative 30S ribosomal protein S3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|291349997|gb|EFE76901.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998] gi|326657576|gb|EGE42422.1| ribosomal protein S3 [Streptomyces cf. griseus XylebKG-1] Length = 276 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|296392591|ref|YP_003657475.1| 30S ribosomal protein S3 [Segniliparus rotundus DSM 44985] gi|296179738|gb|ADG96644.1| ribosomal protein S3 [Segniliparus rotundus DSM 44985] Length = 282 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG+ W SRWFA +Y + ED++IR+ L +++AG+AK+ IERT Sbjct: 1 MGQKIHPHGFRLGITTDWRSRWFAD-KQYKDYIKEDIQIRKLLVSGMERAGIAKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVKNSETIAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAMR G+KV+ GRL GAE+SR+E Y EGRVPL TLR Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRHQQVKGIKVMCGGRLGGAEMSRSEYYREGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDYG A+T +G G+KV++ D V Sbjct: 180 ADIDYGFHEAKTTFGRIGVKVWIYKGDIVGGR 211 >gi|260905715|ref|ZP_05914037.1| 30S ribosomal protein S3 [Brevibacterium linens BL2] Length = 273 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 146/210 (69%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ S+WFA G Y + ED+KIR+ + L++AG++K+ Sbjct: 1 MGQKINPNGFRLGITTDHKSKWFADSTKPGQRYSDYVLEDVKIRQMMTKGLERAGISKVN 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV EI+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQIQLNILEVKNAEIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAM++++QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLASRVAFRRAMRKSIQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA+IDYG A T +G G+KV++ D Sbjct: 181 TLRANIDYGFHEAHTTFGRIGVKVWIYKGD 210 >gi|328884432|emb|CCA57671.1| SSU ribosomal protein S3p [Streptomyces venezuelae ATCC 10712] Length = 279 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEMDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|311086240|gb|ADP66322.1| 30S ribosomal protein S3 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 233 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 152/212 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDY + A T YG G+KV++ + + + Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212 >gi|219681864|ref|YP_002468250.1| 30S ribosomal protein S3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471569|ref|ZP_05635568.1| 30S ribosomal protein S3 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254764517|sp|B8D9U1|RS3_BUCA5 RecName: Full=30S ribosomal protein S3 gi|219624707|gb|ACL30862.1| 30S ribosomal protein S3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 233 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 152/212 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDY + A T YG G+KV++ + + + Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212 >gi|57650828|ref|YP_187043.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus COL] gi|62287183|sp|Q5HDW4|RS3_STAAC RecName: Full=30S ribosomal protein S3 gi|57285014|gb|AAW37108.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus COL] Length = 217 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQISGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|293402507|ref|ZP_06646642.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304021|gb|EFE45275.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 264 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L LK A V++I IER+ Sbjct: 1 MGQKVSPIGMRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAELKAASVSRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 I++ +ARPG+IIG G +IE ++KKL +T I++ V E+ P+++A L+A+S Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENIENLKKKLEKLTGGKNIYVKVLEIANPDLDARLVARS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDY A T YG G+KV++ + + P A Sbjct: 180 ADIDYAWEEASTQYGRLGVKVWICRGEVLPGQMVQEPEAPK 220 >gi|298531079|ref|ZP_07018480.1| ribosomal protein S3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509102|gb|EFI33007.1| ribosomal protein S3 [Desulfonatronospira thiodismutans ASO3-1] Length = 211 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 106/210 (50%), Positives = 147/210 (70%), Gaps = 1/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FR+G N W SRW+++ S Y + ED K+R YL+ L AG+++I +ER Sbjct: 1 MGQKVHPYGFRVGYNKNWLSRWYSKTS-YPEFIIEDRKLRNYLKSKLYHAGISRIELERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RII+Y++RPG++IG+KG +IE +R L +E + VNEV +PE +A L+A++I Sbjct: 60 ADKVRIIIYTSRPGIVIGRKGAEIENLRSDLKKKFQNEFSIEVNEVRRPETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR+V A +FGA G+K+ +GRL GAE++RTE EGRVPL TLRA Sbjct: 120 ALQLERRVAFRRAMKRSVSLAQKFGAQGIKISCAGRLGGAEIARTEWLREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A A T YG G+KV++ D +++ Sbjct: 180 DIDYGFAQARTTYGIIGVKVWIYKGDILNE 209 >gi|167767797|ref|ZP_02439850.1| hypothetical protein CLOSS21_02332 [Clostridium sp. SS2/1] gi|317497089|ref|ZP_07955416.1| ribosomal protein S3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710536|gb|EDS21115.1| hypothetical protein CLOSS21_02332 [Clostridium sp. SS2/1] gi|291558866|emb|CBL37666.1| SSU ribosomal protein S3P [butyrate-producing bacterium SSC/2] gi|316895634|gb|EFV17789.1| ribosomal protein S3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 216 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 147/213 (69%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+SRW+A + + L ED KIR+Y++ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAEDA-FADNLVEDDKIRKYVKKRLYNAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IVY+A+PG++IGK G+ IE+++K L MT+ ++ + V EV +P+ +A L+A++I Sbjct: 60 SDRVKLIVYTAKPGVVIGKGGSSIEELKKDLQKMTDKKLLIDVKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMQRTMRSGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +IDYG A A+T YG G+K ++ + + Sbjct: 180 NIDYGFAEADTTYGKVGVKTWIYHGEVLPSKKE 212 >gi|148655331|ref|YP_001275536.1| 30S ribosomal protein S3 [Roseiflexus sp. RS-1] gi|189045329|sp|A5USI3|RS3_ROSS1 RecName: Full=30S ribosomal protein S3 gi|148567441|gb|ABQ89586.1| SSU ribosomal protein S3P [Roseiflexus sp. RS-1] Length = 262 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 99/223 (44%), Positives = 145/223 (65%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG W S+WFA Y LLHED+ +R+ + L+ AGVA+I IER+ Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RNYTELLHEDVMLRKIIAKELENAGVARIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VY+A+PG++IGK+G ++++R +L T ++ L++ E+ +PE+ A L+A+SI Sbjct: 60 ANKVEVTVYTAKPGIVIGKRGAKVDELRAELEKRTGKKVKLNIQEIHQPELEAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R +GRVPL TLRA Sbjct: 120 AEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSGRLAGAEMARVAWERDGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A T YG G+KV++ + D + V Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPDQKGQTQLPQPAVA 222 >gi|295838410|ref|ZP_06825343.1| ribosomal protein S3 [Streptomyces sp. SPB74] gi|302519655|ref|ZP_07271997.1| ribosomal protein S3 [Streptomyces sp. SPB78] gi|318058122|ref|ZP_07976845.1| 30S ribosomal protein S3 [Streptomyces sp. SA3_actG] gi|318076025|ref|ZP_07983357.1| 30S ribosomal protein S3 [Streptomyces sp. SA3_actF] gi|197695793|gb|EDY42726.1| ribosomal protein S3 [Streptomyces sp. SPB74] gi|302428550|gb|EFL00366.1| ribosomal protein S3 [Streptomyces sp. SPB78] Length = 277 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|295692166|ref|YP_003600776.1| 30S ribosomal protein s3 [Lactobacillus crispatus ST1] gi|295030272|emb|CBL49751.1| 30S ribosomal protein S3 [Lactobacillus crispatus ST1] Length = 224 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKDKPASKPAKGGNR 224 >gi|289550149|ref|YP_003471053.1| SSU ribosomal protein S3p (S3e) [Staphylococcus lugdunensis HKU09-01] gi|315659221|ref|ZP_07912085.1| 30S ribosomal protein S3 [Staphylococcus lugdunensis M23590] gi|289179681|gb|ADC86926.1| SSU ribosomal protein S3p (S3e) [Staphylococcus lugdunensis HKU09-01] gi|315495646|gb|EFU83977.1| 30S ribosomal protein S3 [Staphylococcus lugdunensis M23590] Length = 217 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKIDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|239980050|ref|ZP_04702574.1| 30S ribosomal protein S3 [Streptomyces albus J1074] gi|291451907|ref|ZP_06591297.1| 30S ribosomal protein S3 [Streptomyces albus J1074] gi|291354856|gb|EFE81758.1| 30S ribosomal protein S3 [Streptomyces albus J1074] Length = 276 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|160941063|ref|ZP_02088401.1| hypothetical protein CLOBOL_05956 [Clostridium bolteae ATCC BAA-613] gi|158436012|gb|EDP13779.1| hypothetical protein CLOBOL_05956 [Clostridium bolteae ATCC BAA-613] Length = 218 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED +R++L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNMRKFLKKRLFSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G++IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGSEIEKLKKEVQKLTDKKLFIDIKEIKRPDRDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMGRTMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKIGVKVWIYKGEVLPTK 210 >gi|302388082|ref|YP_003823904.1| ribosomal protein S3 [Clostridium saccharolyticum WM1] gi|302198710|gb|ADL06281.1| ribosomal protein S3 [Clostridium saccharolyticum WM1] Length = 218 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 145/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WNS+W+A +++ L ED IR++L+ L AG++ I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWNSKWYAE-ADFADNLVEDYAIRKFLKKRLYSAGISDIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IGK G++IEK++ ++ +T+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVKVTIHTAKPGVVIGKGGSEIEKLKVEVQKLTDKKLFVDIKEIKRPDRDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMGRSMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T +G G+KV++ + + Sbjct: 180 DIDYGFAEADTTFGKIGVKVWIYNGEILPTK 210 >gi|256825880|ref|YP_003149840.1| 30S ribosomal protein S3P [Kytococcus sedentarius DSM 20547] gi|256689273|gb|ACV07075.1| SSU ribosomal protein S3P [Kytococcus sedentarius DSM 20547] Length = 276 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 5/222 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ SRWFA G Y + ED+ IR+ L +++AG+AK+ Sbjct: 1 MGQKINPHGFRLGITTDHKSRWFADSSAEGQRYADFVGEDVAIRKLLSSGMERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRGQLEKLTGKQVQLNILEVKNPEAVAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV RRAMK+ +QSA R GA G++V SGRL GAE+SRTE Y EGRVPL Sbjct: 121 AQGIAEQLSARVSTRRAMKKGIQSAQRAGAKGIRVQCSGRLGGAEMSRTEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 TLRA+IDYG A T +G G+KV++ D ++D + A Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYQGD-MTDKELAREQA 221 >gi|227549832|ref|ZP_03979881.1| 30S ribosomal protein S3 [Corynebacterium lipophiloflavum DSM 44291] gi|227078087|gb|EEI16050.1| 30S ribosomal protein S3 [Corynebacterium lipophiloflavum DSM 44291] Length = 249 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 144/215 (66%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + W+A Y + ED+KIRE+L L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITADWKTHWYAD-KNYADYVAEDIKIREFLSKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + NA L+AQS+ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKNVDANAALVAQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QS+M G+K++ SGRL GAE++R E Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSSMRNPQVKGIKIMTSGRLGGAEIARVERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A A T +G G+KV++ D V + Sbjct: 180 AEIDYGIAEAHTTFGVIGVKVWIYKGDVVGGVRES 214 >gi|42518435|ref|NP_964365.1| 30S ribosomal protein S3 [Lactobacillus johnsonii NCC 533] gi|61215654|sp|Q74L83|RS3_LACJO RecName: Full=30S ribosomal protein S3 gi|41582720|gb|AAS08331.1| 30S ribosomal protein S3 [Lactobacillus johnsonii NCC 533] Length = 222 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKELSALTNKNVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T YG G+KV+++ E+ P+ + + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219 >gi|283853159|ref|ZP_06370412.1| ribosomal protein S3 [Desulfovibrio sp. FW1012B] gi|283571417|gb|EFC19424.1| ribosomal protein S3 [Desulfovibrio sp. FW1012B] Length = 213 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 109/215 (50%), Positives = 156/215 (72%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y A + ED +IR++++ +L AG++KI IER Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPAFVFEDNQIRKFVKKNLYHAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KGT+IEK+R L E + VNE+ +PEI++ L+A++I Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFGREFTVEVNEIRRPEIDSQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A+A+T YG G+KV++ + E+ D + Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213 >gi|18311381|ref|NP_563315.1| 30S ribosomal protein S3 [Clostridium perfringens str. 13] gi|110800643|ref|YP_697088.1| 30S ribosomal protein S3 [Clostridium perfringens ATCC 13124] gi|110803016|ref|YP_699657.1| 30S ribosomal protein S3 [Clostridium perfringens SM101] gi|168205228|ref|ZP_02631233.1| ribosomal protein S3 [Clostridium perfringens E str. JGS1987] gi|168211899|ref|ZP_02637524.1| ribosomal protein S3 [Clostridium perfringens B str. ATCC 3626] gi|168215182|ref|ZP_02640807.1| ribosomal protein S3 [Clostridium perfringens CPE str. F4969] gi|168216637|ref|ZP_02642262.1| ribosomal protein S3 [Clostridium perfringens NCTC 8239] gi|169347113|ref|ZP_02866055.1| ribosomal protein S3 [Clostridium perfringens C str. JGS1495] gi|182626920|ref|ZP_02954653.1| ribosomal protein S3 [Clostridium perfringens D str. JGS1721] gi|27734515|sp|Q8XHS9|RS3_CLOPE RecName: Full=30S ribosomal protein S3 gi|122958674|sp|Q0TMQ2|RS3_CLOP1 RecName: Full=30S ribosomal protein S3 gi|123047161|sp|Q0SQF0|RS3_CLOPS RecName: Full=30S ribosomal protein S3 gi|18146065|dbj|BAB82105.1| 30S ribosomal protein S3 [Clostridium perfringens str. 13] gi|110675290|gb|ABG84277.1| 30S ribosomal protein S3 [Clostridium perfringens ATCC 13124] gi|110683517|gb|ABG86887.1| 30S ribosomal protein S3 [Clostridium perfringens SM101] gi|169296796|gb|EDS78925.1| ribosomal protein S3 [Clostridium perfringens C str. JGS1495] gi|170663255|gb|EDT15938.1| ribosomal protein S3 [Clostridium perfringens E str. JGS1987] gi|170710163|gb|EDT22345.1| ribosomal protein S3 [Clostridium perfringens B str. ATCC 3626] gi|170713391|gb|EDT25573.1| ribosomal protein S3 [Clostridium perfringens CPE str. F4969] gi|177907710|gb|EDT70325.1| ribosomal protein S3 [Clostridium perfringens D str. JGS1721] gi|182381145|gb|EDT78624.1| ribosomal protein S3 [Clostridium perfringens NCTC 8239] Length = 222 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 144/219 (65%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED +IR++++ L AG+AKI IER+ Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKKNFADNLIEDQQIRKFIKKELFSAGIAKIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +++A+PG+IIGK G+ IE+++ L N+ + +++ EV E NA L+A++ Sbjct: 61 AKRVKLNIHTAKPGVIIGKGGSGIERLKASLKNIIAEKNVLINIVEVKNAETNAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQT+R Sbjct: 121 IAAQLEKRISFRRAMKQTIQRAMKAGTLGVKTACSGRLGGAEIARTEQYNEGTIPLQTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A+T YG G+KV+V + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKKEE 219 >gi|15896377|ref|NP_349726.1| 30S ribosomal protein S3 [Clostridium acetobutylicum ATCC 824] gi|27734526|sp|Q97EI4|RS3_CLOAB RecName: Full=30S ribosomal protein S3 gi|15026193|gb|AAK81066.1|AE007808_19 Ribosomal protein S3 [Clostridium acetobutylicum ATCC 824] gi|325510533|gb|ADZ22169.1| 30S ribosomal protein S3 [Clostridium acetobutylicum EA 2018] Length = 222 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 145/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WN++W+A + + L +D KIR++++ L AGV++I IER Sbjct: 1 MGQKVNPHGLRVGVIKEWNAKWYANSKNFSSYLVQDNKIRKFVKNKLSSAGVSRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119 K ++ +++A+PG++IGK G IE ++K L N + + +++ EV + NA L+A++ Sbjct: 61 AKRVKLNIHTAKPGMVIGKGGQGIEALKKDLVNFVDKENVLINIVEVKNSDANAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERR+ FRRAMK+ +Q AMR GA GVK +GRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLERRISFRRAMKQTIQRAMRTGAKGVKTACAGRLAGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A+T YG G+KV+V + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEILPTKKIEKKEE 219 >gi|301168452|emb|CBW28042.1| 30S ribosomal protein S3 [Bacteriovorax marinus SJ] Length = 208 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 102/207 (49%), Positives = 138/207 (66%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG W S W+A+ Y L EDL IR Y++ ++K A VAK I RT Sbjct: 1 MGQKVHPYGFRLGYIKGWQSNWYAKD-NYAQQLKEDLAIRNYVEKNMKNAAVAKTDISRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ VY+A+PG+ IGKKG IEKIR+ L +T + ++ EV +P+ ++ LIA++I Sbjct: 60 SDQIKVTVYTAKPGVAIGKKGAGIEKIREDLKKLTKGTLIFNIAEVKRPDADSKLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +QSA R G G++V +GRL GAE++R E Y E +VPL TLRA Sbjct: 120 ASQLEKRVAFRRAMKKVMQSAFRAGVKGIRVRTAGRLGGAEMARAEGYSERKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY TA A T YG G+KV+V + Sbjct: 180 DIDYSTAEAHTTYGVIGVKVWVYKGEV 206 >gi|251772496|gb|EES53062.1| ribosomal protein S3 [Leptospirillum ferrodiazotrophum] Length = 229 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 119/230 (51%), Positives = 170/230 (73%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG TWNSRW+A Y LHEDL+IR+Y++ L QAG+++I IERT Sbjct: 1 MGQKVHPTGFRLGYIKTWNSRWYA-KKSYVEWLHEDLQIRKYIKKKLYQAGISRIDIERT 59 Query: 61 HKN--CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 K+ R++++SA+PGLIIGKKG++IEK++ L+ SE+ +S+ EV KPE++A L+A+ Sbjct: 60 GKDSITRVLIHSAKPGLIIGKKGSEIEKLKSDLAKSIKSELSISIKEVKKPEVDAQLVAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 SIA QLE+R+ FRRAMK++V SA+RFGA GVK+ +GRL GAE++RTE Y EGRVPLQT+ Sbjct: 120 SIASQLEKRISFRRAMKKSVASALRFGALGVKICCAGRLGGAEIARTEWYREGRVPLQTI 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-DSTIPAAEHRVVEKDS 227 RA ID G A + T +G GIKV+V + D + + ++++ AA + + + Sbjct: 180 RADIDLGLAESYTTFGKIGIKVWVYMGDHLPSNPEASLDAASDKSRKVKA 229 >gi|227494551|ref|ZP_03924867.1| ribosomal protein S3 [Actinomyces coleocanis DSM 15436] gi|226832285|gb|EEH64668.1| ribosomal protein S3 [Actinomyces coleocanis DSM 15436] Length = 271 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 147/211 (69%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED+ IR+ L L++AGVA+I Sbjct: 1 MGQKVNPTGFRLGITTEHRSRWFADSTTKGQRYSDYVAEDVAIRKLLNETLERAGVARIQ 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +Y+ARPG++IG++G + +++R +L +T ++ L + EV PE++A L+ Sbjct: 61 IERTTDRVRVDLYAARPGIVIGRRGAEADRLRVQLEKLTGKQVQLKIIEVKNPELDAKLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A+QSAMR GA G++V SGRL GAE+SR E Y EGRVPL Sbjct: 121 AQGIAEQLGARVSFRRAMRKAMQSAMRAGAKGIRVQCSGRLGGAEMSRAEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYGT A+T +G G+KV++ D Sbjct: 181 TLRANIDYGTFEAKTTFGRIGVKVWIYKGDV 211 >gi|221140154|ref|ZP_03564647.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302752117|gb|ADL66294.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 217 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNVLTDKKVHINVIEIKKVDLDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|42524369|ref|NP_969749.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100] gi|61215579|sp|Q6MJ20|RS3_BDEBA RecName: Full=30S ribosomal protein S3 gi|39576578|emb|CAE80742.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100] Length = 221 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 107/212 (50%), Positives = 162/212 (76%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV TW+SRW+A+G +Y LHED+++R++L+ LK AGVAKI +ER Sbjct: 1 MGQKVNPIGLRVGVIRTWDSRWYAKGQQYYENLHEDIRLRKFLKDKLKNAGVAKIEMERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K +II+ +ARPG++IGKKG+ I+ ++ ++ +T +E+ LS+ EV KP+++A L+A+SI Sbjct: 61 AKKIKIIISTARPGVVIGKKGSGIDALKAEVQKLTPNEVFLSIQEVRKPDLDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ +RRA+K+++ +A++ G G+K+ SGRL+GAE++R+E Y E VPL TLRA Sbjct: 121 AQQLEKRISWRRALKKSIAAAIKGGVRGIKIRVSGRLDGAEIARSEWYNEKSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDYGTA + TAYG G+KV++ D +S + Sbjct: 181 DIDYGTAESLTAYGIIGLKVWIYKGDILSARE 212 >gi|158319549|ref|YP_001512056.1| ribosomal protein S3 [Alkaliphilus oremlandii OhILAs] gi|189044984|sp|A8MLE6|RS3_ALKOO RecName: Full=30S ribosomal protein S3 gi|158139748|gb|ABW18060.1| ribosomal protein S3 [Alkaliphilus oremlandii OhILAs] Length = 238 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A ++G LL ED +IR++++ L +GV++I IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDTKWYANKRDFGDLLVEDNEIRKFVKKKLFLSGVSRIEIERA 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N ++ V++A+PG++IGK G +E +RK + ++ + ++V EV +PE +A L+A++ Sbjct: 61 ANNKVKVNVHTAKPGMVIGKGGQGVEDLRKDIEKISKKNVAVNVIEVKRPETDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y +G VPLQTLR Sbjct: 121 VAFQLERRVSFRRAMKQVMQRAMKSGAKGIKVATSGRLGGAEMARTEGYSQGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A I+YG A A+T YG GIKV++ + + E V + Sbjct: 181 ADINYGFAEADTTYGKLGIKVWIYKGEVLPTKGRVASNNEEVVGNVE 227 >gi|302876528|ref|YP_003845161.1| 30S ribosomal protein S3 [Clostridium cellulovorans 743B] gi|307687201|ref|ZP_07629647.1| 30S ribosomal protein S3 [Clostridium cellulovorans 743B] gi|302579385|gb|ADL53397.1| ribosomal protein S3 [Clostridium cellulovorans 743B] Length = 223 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 144/219 (65%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++WFA E+ L ED KIR++++ L +G++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWFADKKEFANYLVEDNKIRDFVKTKLYNSGISKIEIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIG+ G IE ++K L ++ + I +++ E+ E +A L+A+S Sbjct: 61 AKRVKLNIYTAKPGMIIGRGGQGIEALKKDLLKISADKNILINIVEIKNAETDAQLMAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+R+ FRRAMK+ +Q AM+ G GVK +GRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMKQGVRGVKTACAGRLAGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A T YG G+KV+V + + Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVKNEEE 219 >gi|285017326|ref|YP_003375037.1| 30s ribosomal protein s3 [Xanthomonas albilineans GPE PC73] gi|283472544|emb|CBA15049.1| probable 30s ribosomal protein s3 [Xanthomonas albilineans] Length = 241 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 116/208 (55%), Positives = 156/208 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+NP+ RLG++ WNS+W+A E+ L DLK+RE L+ L QAG++KILIER Sbjct: 1 MGHKVNPVGIRLGISKDWNSKWYANKGEFAGYLAADLKVREMLRKKLAQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI Sbjct: 61 AKTARVTIYTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL TLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVSVSGRLNGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 I YG A A T YG+ G++V ++ + Sbjct: 181 DIGYGFAEANTTYGTIGVQVTINNGEIF 208 >gi|323483295|ref|ZP_08088685.1| hypothetical protein HMPREF9474_00434 [Clostridium symbiosum WAL-14163] gi|323691207|ref|ZP_08105483.1| ribosomal protein S3 [Clostridium symbiosum WAL-14673] gi|323403393|gb|EGA95701.1| hypothetical protein HMPREF9474_00434 [Clostridium symbiosum WAL-14163] gi|323504726|gb|EGB20512.1| ribosomal protein S3 [Clostridium symbiosum WAL-14673] Length = 218 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 146/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED KIR YL+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLVEDHKIRTYLKKKLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++Y+A+PG++IGK G +IEK +K++ +T+ + + + EV + + +A L+A++I Sbjct: 60 SDKVKIVIYTAKPGVVIGKGGAEIEKTKKEIQKLTDKRVFVDIKEVKRADRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL+ RV FRRAMK A+ +M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLQNRVSFRRAMKSAMGRSMKAGAKGIKASVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKTGVKVWIYKGEVLPAK 210 >gi|257454053|ref|ZP_05619327.1| ribosomal protein S3 [Enhydrobacter aerosaccus SK60] gi|257448531|gb|EEV23500.1| ribosomal protein S3 [Enhydrobacter aerosaccus SK60] Length = 250 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLGV N+ W+A +Y L DL++R+YL+ LK A ++ I IER Sbjct: 1 MGQKVHPIGIRLGVIRKSNANWYADPKKYSEYLINDLQVRKYLEKKLKAAMISGISIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I + +ARPG+IIGKKG DIE ++K+L+ + +S+ E+ +P+++A L+A I Sbjct: 61 TGAAKITIATARPGIIIGKKGEDIESLQKELTKLMGVPAQVSIEEITQPDLDARLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRAMKRAVQ++M+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMKAGAQGIKVELSGRLGGAEIARSEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVE 224 IDY AET YG+ G+KV++ + + + P E + Sbjct: 181 DIDYSNVRAETTYGTIGVKVWIFRGEVLDGMNRVYNPVKEEKQAR 225 >gi|239918193|ref|YP_002957751.1| SSU ribosomal protein S3P [Micrococcus luteus NCTC 2665] gi|281415616|ref|ZP_06247358.1| 30S ribosomal protein S3 [Micrococcus luteus NCTC 2665] gi|289706539|ref|ZP_06502889.1| ribosomal protein S3 [Micrococcus luteus SK58] gi|259495253|sp|C5CC56|RS3_MICLC RecName: Full=30S ribosomal protein S3 gi|239839400|gb|ACS31197.1| SSU ribosomal protein S3P [Micrococcus luteus NCTC 2665] gi|289556674|gb|EFD50015.1| ribosomal protein S3 [Micrococcus luteus SK58] Length = 272 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 104/210 (49%), Positives = 147/210 (70%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ S WFA G Y L ED+KIRE + +++AG++K+ Sbjct: 1 MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ +A+QL RV FRRAMK+A+QSAMR GA G+++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA+ID+G A+T +G G+KV++ D Sbjct: 181 TLRANIDFGKFEAKTTFGRIGVKVWIYKGD 210 >gi|331004127|ref|ZP_08327607.1| 30S ribosomal protein S3 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411537|gb|EGG90947.1| 30S ribosomal protein S3 [Lachnospiraceae oral taxon 107 str. F0167] Length = 218 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 145/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L A V+ I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAD-KDFADCLVEDYNIRKFLKNKLYSASVSDIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RII+++ARPG++IGK+G ++EK++K++S T+ ++ + + E+ +P+ +A L+A+SI Sbjct: 60 SDRVRIILHTARPGVVIGKQGAEVEKLKKEVSKFTDKKVFIDIKEIKRPDRDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + +M+ G G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ATQLENRISFRRAMKSTMSRSMKAGVLGIKASCSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 I YG A A T YG G+KV++ + + + + + Sbjct: 180 DIQYGFAEANTTYGKVGVKVWIYTGEVLPQRKTQEGSVK 218 >gi|291562762|emb|CBL41578.1| SSU ribosomal protein S3P [butyrate-producing bacterium SS3/4] Length = 218 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++ L ED KIR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGMRVGVIKDWDSRWYAE-ADFADNLIEDHKIRTYLKKRLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIV++A+PG++IGK G++IEK++ ++ MT ++ + + EV +P+ A L+A+SI Sbjct: 60 SDRVKIIVFTAKPGVVIGKGGSEIEKVKAEVQKMTAKKVFVDIKEVKRPDREAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + +M+ G G+K GRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMSRSMKAGVLGIKTAVGGRLGGADIARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210 >gi|302543355|ref|ZP_07295697.1| ribosomal protein S3 [Streptomyces hygroscopicus ATCC 53653] gi|302460973|gb|EFL24066.1| ribosomal protein S3 [Streptomyces himastatinicus ATCC 53653] Length = 275 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + S Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226 >gi|296119215|ref|ZP_06837785.1| ribosomal protein S3 [Corynebacterium ammoniagenes DSM 20306] gi|295967841|gb|EFG81096.1| ribosomal protein S3 [Corynebacterium ammoniagenes DSM 20306] Length = 247 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 105/215 (48%), Positives = 149/215 (69%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + WFA +Y + ED+KIREYL L++AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIREYLSKGLERAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQSI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQGAMRQPQVKGIKVLTSGRLGGAEMSRTERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A A T +G G+KV++ D V + Sbjct: 180 AEIDYGFAEAHTTFGRIGVKVWIYKGDVVGGVRES 214 >gi|307328036|ref|ZP_07607217.1| ribosomal protein S3 [Streptomyces violaceusniger Tu 4113] gi|306886341|gb|EFN17346.1| ribosomal protein S3 [Streptomyces violaceusniger Tu 4113] Length = 275 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + S Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226 >gi|58336636|ref|YP_193221.1| 30S ribosomal protein S3 [Lactobacillus acidophilus NCFM] gi|75507660|sp|Q5FM84|RS3_LACAC RecName: Full=30S ribosomal protein S3 gi|58253953|gb|AAV42190.1| 30S ribosomal protein S3 [Lactobacillus acidophilus NCFM] Length = 224 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLKEDLQIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AM GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMLAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|154149468|ref|YP_001405703.1| 30S ribosomal protein S3 [Campylobacter hominis ATCC BAA-381] gi|171769698|sp|A7HZL2|RS3_CAMHC RecName: Full=30S ribosomal protein S3 gi|153805477|gb|ABS52484.1| ribosomal protein S3 [Campylobacter hominis ATCC BAA-381] Length = 231 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 148/219 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF S + ED KIR++L+ L AG+ +ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPVKSAIPENISEDYKIRKFLKAKLYYAGINQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG++IE ++ ++ + ++ +++ E +P +A L A+++ Sbjct: 61 AKKLRVTIVAARPGVIIGKKGSEIENLKNEVVALLKKDVTINIKEERRPGSSAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +QSA + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLEKRVAFRRAMKKVIQSAQKAGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYG A A T YG+ G+KV++ + + E Sbjct: 181 KIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQAEKTDE 219 >gi|168334346|ref|ZP_02692533.1| ribosomal protein S3 [Epulopiscium sp. 'N.t. morphotype B'] Length = 219 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 141/211 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W++RWFA ++ L ED KIR++++ L AG+ I IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDARWFADKKKFADYLVEDDKIRKFIKKKLYVAGIDXIEIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ V +A+PG++IGK G IE +R+++ MT + +++ ++ +PE+NA L A+++ Sbjct: 61 AGKLRVHVSTAKPGIVIGKGGASIEALRQEVQKMTKDRVSINIVQIDRPEVNAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R FRRAMK+ + A++ GA G+KV SGRL GAE++RTE Y EG +PLQTLRA Sbjct: 121 ALQLENRTAFRRAMKQVMGRAIKAGAXGIKVSCSGRLGGAEMARTEAYSEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 I+YG A A+T YG GIKV++ + + Sbjct: 181 DIEYGFAEADTTYGKLGIKVWIYKGEVLPQK 211 >gi|293380383|ref|ZP_06626454.1| 30S ribosomal protein S3 [Lactobacillus crispatus 214-1] gi|290923066|gb|EFD99997.1| 30S ribosomal protein S3 [Lactobacillus crispatus 214-1] Length = 224 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 AHQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|88854676|ref|ZP_01129342.1| 30S ribosomal protein S3 [marine actinobacterium PHSC20C1] gi|88815837|gb|EAR25693.1| 30S ribosomal protein S3 [marine actinobacterium PHSC20C1] Length = 271 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 105/231 (45%), Positives = 151/231 (65%), Gaps = 6/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED+KIR L+ +L +AGVA+I Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKPGQRYSDYVAEDVKIRNLLKSNLDRAGVARIE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E+IR +L ++ +I L++ EV PE A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRGELEKLSGKQIQLNILEVKNPEAEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPL 175 AQ IA+QL RV FRRAM++ +Q A R G+ GV++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQGAQRVGSVKGVRIQVSGRLGGAEMSRSEYYREGRVPL 180 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A+T +G G+KV+V D +++ + A + + Sbjct: 181 HTLRANIDYGFYEAKTTFGRIGVKVWVYKGD-ITNKELAREQANQKSSRPE 230 >gi|228474735|ref|ZP_04059466.1| ribosomal protein S3 [Staphylococcus hominis SK119] gi|314935838|ref|ZP_07843190.1| ribosomal protein S3 [Staphylococcus hominis subsp. hominis C80] gi|228271398|gb|EEK12766.1| ribosomal protein S3 [Staphylococcus hominis SK119] gi|313656403|gb|EFS20143.1| ribosomal protein S3 [Staphylococcus hominis subsp. hominis C80] Length = 217 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W ++W+A ++ +LLHEDL+IR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLRIRKFIDNELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKVDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|270291127|ref|ZP_06197350.1| 30S ribosomal protein S3 [Pediococcus acidilactici 7_4] gi|304385408|ref|ZP_07367753.1| 30S ribosomal protein S3 [Pediococcus acidilactici DSM 20284] gi|270280523|gb|EFA26358.1| 30S ribosomal protein S3 [Pediococcus acidilactici 7_4] gi|304328615|gb|EFL95836.1| 30S ribosomal protein S3 [Pediococcus acidilactici DSM 20284] Length = 223 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 148/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W ++W+A ++ L ED+KIRE++ L A V+ + IER Sbjct: 1 MGQKVNPNGFRVGVIRDWQAKWYAD-KDFAKFLGEDIKIREFIAKQLTDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++EK+RK+L+ +T +H+++ E+ KP++ A L+ ++I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEKLRKQLNELTGKRVHINIVEIKKPDLEAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK+A+Q +MR GA G+K +GRLNGA++SR E Y EG+VPL TLRA Sbjct: 120 AAQLEGRVAFRRAMKQAMQRSMRAGAKGIKTQVAGRLNGADMSRVEHYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +DY A T YG G+K +V + + ++ ++ + Sbjct: 180 DVDYAWVEARTTYGQLGVKTWVYRGEILPEAKEANNNSKEQ 220 >gi|88807890|ref|ZP_01123401.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7805] gi|88787929|gb|EAR19085.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7805] Length = 243 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPTLLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R +K N ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTVGDPNRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223 LRA IDY T VA T YG GIKV+V + + D + A R Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAQQQLPVGATPRRRA 229 >gi|315652348|ref|ZP_07905340.1| 30S ribosomal protein S3 [Eubacterium saburreum DSM 3986] gi|315485471|gb|EFU75861.1| 30S ribosomal protein S3 [Eubacterium saburreum DSM 3986] Length = 218 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 94/219 (42%), Positives = 145/219 (66%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L A V+ I IER Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAD-KDFADCLVEDYNIRKFLKKKLYSASVSDIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RII+++ARPG++IGK+G ++EK++K++S T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVRIILHTARPGVVIGKQGVEVEKLKKEVSKFTDKKVFIDIKEIKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + +M+ G G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AAQLENRISFRRAMKSTMSRSMKAGVLGIKASCSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 I YG A A T YG G+KV++ + + + + + Sbjct: 180 DIQYGFAEANTTYGKVGVKVWIYTGEVLPQRKTQEGSVK 218 >gi|21223088|ref|NP_628867.1| 30S ribosomal protein S3 [Streptomyces coelicolor A3(2)] gi|256785817|ref|ZP_05524248.1| 30S ribosomal protein S3 [Streptomyces lividans TK24] gi|289769709|ref|ZP_06529087.1| 30S ribosomal protein S3 [Streptomyces lividans TK24] gi|27734538|sp|Q9L0D4|RS3_STRCO RecName: Full=30S ribosomal protein S3 gi|7321298|emb|CAB82076.1| 30S ribosomal protein S3 [Streptomyces coelicolor A3(2)] gi|289699908|gb|EFD67337.1| 30S ribosomal protein S3 [Streptomyces lividans TK24] Length = 277 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR L +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + +KIR +L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGQLEKLTGKQVQLNILEVKSPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|302390964|ref|YP_003826784.1| 30S ribosomal protein S3P [Acetohalobium arabaticum DSM 5501] gi|302203041|gb|ADL11719.1| SSU ribosomal protein S3P [Acetohalobium arabaticum DSM 5501] Length = 216 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++W+A EY +LHEDL+IR +++ + AG+A+I+IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYAEKDEYADVLHEDLEIRNHVKDKMYNAGIARIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V++ARPG++IGK G+++ +R +L ++T +I ++V EV PE NA LIA+ + Sbjct: 61 ADRVKLDVHTARPGMVIGKGGSEVNALRNELQDITGKQIQINVVEVKNPEKNAQLIAEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSA-MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 AQQLE+RV FRRAM++A+ + G +G ++ SGRL GAE++R E Y +G V LQTLR Sbjct: 121 AQQLEQRVSFRRAMRQAMNRTLRQDGIEGFRIECSGRLGGAEMARQEGYNKGNVSLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYG A T YG G+KV+++ + + D + Sbjct: 181 ADIDYGFTEAYTTYGKIGVKVWINKGEILPDVEDE 215 >gi|116075761|ref|ZP_01473020.1| 30S ribosomal protein S3 [Synechococcus sp. RS9916] gi|116067076|gb|EAU72831.1| 30S ribosomal protein S3 [Synechococcus sp. RS9916] Length = 243 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 138/229 (60%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y +LL ED +IR ++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKNYPSLLQEDDRIRRFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDNSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223 LRA IDY T VA T YG GIKV+V + + D + A R Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEARQQLPVGATPRRRA 229 >gi|229829423|ref|ZP_04455492.1| hypothetical protein GCWU000342_01513 [Shuttleworthia satelles DSM 14600] gi|229791854|gb|EEP27968.1| hypothetical protein GCWU000342_01513 [Shuttleworthia satelles DSM 14600] Length = 218 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+SRW+A E+ L ED IR++L+ L AG++K+ IER+ Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAE-KEFADFLVEDHTIRDFLKKKLYGAGISKVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + IVY+A+PG++IGK G +IEKI+ + +T ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKAIVYTAKPGVVIGKGGAEIEKIKAEAQKLTKKKLLIDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRAMK + +M+ G G+K SGRL GA+++R+E Y EG +PLQTLRA Sbjct: 120 AQQLENRVSFRRAMKSTMSRSMKTGIKGIKTKCSGRLGGADIARSESYNEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG A A+T YG G+KV++ + + + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPNKNKA 213 >gi|227879249|ref|ZP_03997119.1| 30S ribosomal protein S3 [Lactobacillus crispatus JV-V01] gi|256844435|ref|ZP_05549921.1| 30S ribosomal protein S3 [Lactobacillus crispatus 125-2-CHN] gi|256849177|ref|ZP_05554610.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-1A-US] gi|262047193|ref|ZP_06020151.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-3A-US] gi|227861143|gb|EEJ68792.1| 30S ribosomal protein S3 [Lactobacillus crispatus JV-V01] gi|256613513|gb|EEU18716.1| 30S ribosomal protein S3 [Lactobacillus crispatus 125-2-CHN] gi|256713953|gb|EEU28941.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-1A-US] gi|260572438|gb|EEX29000.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-3A-US] Length = 224 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 153/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|212697259|ref|ZP_03305387.1| hypothetical protein ANHYDRO_01827 [Anaerococcus hydrogenalis DSM 7454] gi|256544512|ref|ZP_05471885.1| 30S ribosomal protein S3 [Anaerococcus vaginalis ATCC 51170] gi|325848910|ref|ZP_08170420.1| ribosomal protein S3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675708|gb|EEB35315.1| hypothetical protein ANHYDRO_01827 [Anaerococcus hydrogenalis DSM 7454] gi|256399837|gb|EEU13441.1| 30S ribosomal protein S3 [Anaerococcus vaginalis ATCC 51170] gi|325480554|gb|EGC83616.1| ribosomal protein S3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 241 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+W+A ++ LL ED KIRE ++ + AG++ I IER Sbjct: 1 MGQKVNPKGFRVGVIKEWDSKWYANKKDFSELLVEDHKIRELVKKEVYDAGISDIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 N ++ VY+ +PG++IGK G +E+++KK+ + + ++V E+ +++A L+A++ Sbjct: 61 VNNIKVSVYTGKPGMVIGKGGAGVEELKKKVEKIAPGKRVIINVEEIKNQDVDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE R+ FRRAMK+AVQ MR GA G+K SGRL GA+++R+E Y EG+VPLQTLR Sbjct: 121 IAAQLENRITFRRAMKQAVQRTMRAGAVGIKTQVSGRLGGADMARSEGYNEGKVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A +DYG A A+T YG G KV+++ + + + Sbjct: 181 ADVDYGFAEADTQYGKIGCKVWINRGEVLPGEKAK 215 >gi|260584422|ref|ZP_05852169.1| 30S ribosomal protein S3 [Granulicatella elegans ATCC 700633] gi|260157940|gb|EEW93009.1| 30S ribosomal protein S3 [Granulicatella elegans ATCC 700633] Length = 220 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI R+G+ W+S+W+A ++ LHEDLKIR+Y++ L A V+ I +ER Sbjct: 1 MGQKIHPIGMRVGIIRDWDSKWYAE-KDFAEFLHEDLKIRDYIRKQLSDASVSTIEVERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++K+R L+ +T ++H+++ E+ KP+++A L+A+ I Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVDKLRTNLNKLTGKKVHINIVEIKKPDLDAKLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERR+ FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARDLERRIAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A+T YG G+K ++ + + Sbjct: 180 DIDYAWEEADTTYGKLGVKTWIYRDEVLPTRK 211 >gi|254391387|ref|ZP_05006590.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064] gi|294814473|ref|ZP_06773116.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064] gi|326442862|ref|ZP_08217596.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064] gi|197705077|gb|EDY50889.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064] gi|294327072|gb|EFG08715.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064] Length = 276 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 154/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR L +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + +KIR +L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGQLEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +++YG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVEYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|268318857|ref|YP_003292513.1| ribosomal protein S3 [Lactobacillus johnsonii FI9785] gi|262397232|emb|CAX66246.1| ribosomal protein S3 [Lactobacillus johnsonii FI9785] gi|329666698|gb|AEB92646.1| 30S ribosomal protein S3 [Lactobacillus johnsonii DPC 6026] Length = 222 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTNKNVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T YG G+KV+++ E+ P+ + + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219 >gi|116513048|ref|YP_811955.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris SK11] gi|125625137|ref|YP_001033620.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris MG1363] gi|281492753|ref|YP_003354733.1| 50S ribosomal protein S3P [Lactococcus lactis subsp. lactis KF147] gi|123320111|sp|Q02W30|RS3_LACLS RecName: Full=30S ribosomal protein S3 gi|152060867|sp|A2RNP9|RS3_LACLM RecName: Full=30S ribosomal protein S3 gi|116108702|gb|ABJ73842.1| SSU ribosomal protein S3P [Lactococcus lactis subsp. cremoris SK11] gi|124493945|emb|CAL98940.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris MG1363] gi|281376405|gb|ADA65891.1| SSU ribosomal protein S3P [Lactococcus lactis subsp. lactis KF147] gi|300071945|gb|ADJ61345.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris NZ9000] gi|326407626|gb|ADZ64697.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis CV56] Length = 217 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+++W+A EY LHEDL IR+ +Q L A V+ I ER Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYADYLHEDLAIRQLIQTKLADASVSLIETERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ KP+++A L+ + I Sbjct: 60 INKVIVTLHTAKPGMVIGKSGANVDALRAELNKLTGKQVHINIVEIKKPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 AKQLEARIAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY A+T YG G+KV++ + + S Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKSVKGEK 217 >gi|153816246|ref|ZP_01968914.1| hypothetical protein RUMTOR_02495 [Ruminococcus torques ATCC 27756] gi|317501780|ref|ZP_07959966.1| ribosomal protein S3 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088699|ref|ZP_08337609.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846429|gb|EDK23347.1| hypothetical protein RUMTOR_02495 [Ruminococcus torques ATCC 27756] gi|316896813|gb|EFV18898.1| ribosomal protein S3 [Lachnospiraceae bacterium 8_1_57FAA] gi|330407222|gb|EGG86725.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 3_1_46FAA] Length = 218 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 146/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A ++ L ED +IR +L+ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKEWDSKWYAE-KDFADNLVEDHEIRTFLKKRLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEIKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210 >gi|227502660|ref|ZP_03932709.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49725] gi|306835225|ref|ZP_07468259.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49726] gi|227076390|gb|EEI14353.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49725] gi|304568905|gb|EFM44436.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49726] Length = 248 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 105/215 (48%), Positives = 148/215 (68%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + WFA +Y + ED+KIR YL L++AG+A I+IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRNYLNKGLERAGIADIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+A SI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAHSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SR E Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRVERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA A T +G GIKV++ D V + Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214 >gi|259047549|ref|ZP_05737950.1| 30S ribosomal protein S3 [Granulicatella adiacens ATCC 49175] gi|259035740|gb|EEW36995.1| 30S ribosomal protein S3 [Granulicatella adiacens ATCC 49175] Length = 220 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ R+G+ W+S+W+A ++ LHEDLKIR+Y++ L +A V+ I IER Sbjct: 1 MGQKIHPLGMRVGIIRDWDSKWYAE-KDFAEFLHEDLKIRDYIRKQLNEASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++K+R L+ +T +H+++ E+ KP+++A L+A+ I Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVDKLRTNLNKLTGKRVHINIVEIKKPDLDAKLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LERR+ FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E Y EG VPL TLRA Sbjct: 120 ARDLERRIAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSESYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A+T YG G+K ++ + + Sbjct: 180 DIDYAWEEADTTYGKLGVKTWIYRDEVLPTRK 211 >gi|226356891|ref|YP_002786631.1| 30S ribosomal protein S3 [Deinococcus deserti VCD115] gi|259495240|sp|C1CXG0|RS3_DEIDV RecName: Full=30S ribosomal protein S3 gi|226318881|gb|ACO46877.1| putative 30S ribosomal protein S3 [Deinococcus deserti VCD115] Length = 248 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 145/226 (64%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLG+ WNSRW+A +Y LL ED KIR+ + L AG+A++ IER Sbjct: 1 MGNKINPNGFRLGITRGWNSRWYAGKKQYAGLLKEDEKIRKLVDKKLSAAGIARVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +I+ +A+PG++IGK G I+++R + + + + ++V E+P P I+A L+A Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKQLRADIEKLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+ERR FRRAMK+A Q M GA GVKV+ SGRL GAE +R E EGRVPL TLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVVLSGRLGGAEQARRETVREGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYGTA+A T YG GIKV V + + TI + R E+ Sbjct: 181 ADIDYGTALARTTYGILGIKVMVFTGEVIGGRTETIARPQRRNDER 226 >gi|56416997|ref|YP_154071.1| 30S ribosomal protein S3 [Anaplasma marginale str. St. Maries] gi|222475365|ref|YP_002563782.1| 30S ribosomal protein S3 (rpsC) [Anaplasma marginale str. Florida] gi|254995173|ref|ZP_05277363.1| 30S ribosomal protein S3 [Anaplasma marginale str. Mississippi] gi|255003347|ref|ZP_05278311.1| 30S ribosomal protein S3 [Anaplasma marginale str. Puerto Rico] gi|255004471|ref|ZP_05279272.1| 30S ribosomal protein S3 [Anaplasma marginale str. Virginia] gi|81677622|sp|Q5PA64|RS3_ANAMM RecName: Full=30S ribosomal protein S3 gi|254764509|sp|B9KJ64|RS3_ANAMF RecName: Full=30S ribosomal protein S3 gi|56388229|gb|AAV86816.1| 30S ribosomal protein S3 [Anaplasma marginale str. St. Maries] gi|222419503|gb|ACM49526.1| 30S ribosomal protein S3 (rpsC) [Anaplasma marginale str. Florida] Length = 211 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ TW+S W+A G Y + LHEDL +R +++ A V++++I R Sbjct: 1 MGQKSNPIGLRLGIVGTWDSLWYAGGG-YASKLHEDLLLRSFVKKTFHHAAVSRVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I ++SARPG+IIGKKGTDI+++++K++ M N ++ L + EV KP++ A LIA++I Sbjct: 60 VDAVIINIHSARPGVIIGKKGTDIDRVKQKIAQMVNHDVELHIVEVKKPDLKAALIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKR VQ+ ++ GA GVKV SGRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKLGARGVKVSCSGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDY A A+T YG G+KV+V + D + + Sbjct: 180 NIDYSCAEAKTIYGIVGVKVWVYVGDSRTGGE 211 >gi|311087404|gb|ADP67484.1| 30S ribosomal protein S3 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 233 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 152/212 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITRVPVQINISEVRKPELDAKLVSDSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDY + A T YG G+KV++ + + + Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212 >gi|224510697|pdb|3FIC|C Chain C, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands Length = 207 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 139/207 (67%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 +Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+ Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A+A T YG G+K Y+ L + + Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEVI 207 >gi|302553548|ref|ZP_07305890.1| ribosomal protein S3 [Streptomyces viridochromogenes DSM 40736] gi|302471166|gb|EFL34259.1| ribosomal protein S3 [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 150/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKSPETDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 ++DYG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|238916271|ref|YP_002929788.1| small subunit ribosomal protein S3 [Eubacterium eligens ATCC 27750] gi|238871631|gb|ACR71341.1| small subunit ribosomal protein S3 [Eubacterium eligens ATCC 27750] Length = 225 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 94/226 (41%), Positives = 149/226 (65%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+++W+A ++ L ED IR++L+ L AG++KI ER Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYAED-DFADNLVEDYNIRKFLKNKLYAAGISKIETERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 +I++++A+PG++IGK G +IE ++K++ +T+ ++ + + EV +P+ +A L+A++ Sbjct: 60 SDRLKIVIHTAKPGIVIGKGGAEIENLKKQVEKLTSAKKLSIDIKEVKRPDKDAQLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLR Sbjct: 120 IAQQLENRISFRRAMKSCMGRTMKQGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYG A A+T YG G+KV++ + + ++ E +K Sbjct: 180 ADIDYGFAEADTTYGKVGVKVWIYEGEVLPTKNNANANVEKEGSDK 225 >gi|254487466|ref|ZP_05100671.1| ribosomal protein S3 [Roseobacter sp. GAI101] gi|214044335|gb|EEB84973.1| ribosomal protein S3 [Roseobacter sp. GAI101] Length = 226 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 121/216 (56%), Positives = 160/216 (74%), Gaps = 4/216 (1%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 RL VN TW+SRW+A +YG LL EDL IR +++ QAG+A+++IER HK CR+ ++ Sbjct: 1 MRLQVNRTWDSRWYADTKDYGDLLLEDLAIRAFIKKECAQAGIARVIIERPHKKCRVTIH 60 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +ARPG+IIGKKG DIE +R K++ MT S++HL++ EV KPE++A L+ +SIAQQLERRV Sbjct: 61 TARPGVIIGKKGADIEGLRLKIAKMTKSDLHLNIVEVRKPELDAALVGESIAQQLERRVS 120 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA IDY A Sbjct: 121 FRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRADIDYAHVEA 180 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 TAYG GIK ++ + E+ + D PAA R ++ Sbjct: 181 MTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 212 >gi|269796249|ref|YP_003315704.1| 30S ribosomal protein S3P [Sanguibacter keddieii DSM 10542] gi|269098434|gb|ACZ22870.1| SSU ribosomal protein S3P [Sanguibacter keddieii DSM 10542] Length = 276 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 149/230 (64%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK++P +RLG+ SRWFA G Y + ED++IR+ + L++AG++K+ Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V +GRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAQRAGAKGIRVQCAGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A T +G G+KV++ D + A + + Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDMTEKEFAASQANQAPRAPRG 230 >gi|227903193|ref|ZP_04020998.1| 30S ribosomal protein S3 [Lactobacillus acidophilus ATCC 4796] gi|227868998|gb|EEJ76419.1| 30S ribosomal protein S3 [Lactobacillus acidophilus ATCC 4796] Length = 224 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLKEDLQIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|160942895|ref|ZP_02090134.1| hypothetical protein FAEPRAM212_00371 [Faecalibacterium prausnitzii M21/2] gi|158445796|gb|EDP22799.1| hypothetical protein FAEPRAM212_00371 [Faecalibacterium prausnitzii M21/2] Length = 234 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 13/231 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + +Y A+PG++IGK G + ++ KL+ + ++V EV P NA Sbjct: 61 VDPSTSAPRVNVNIYCAKPGMVIGKGGEERIALQNKLTKEYGKTVIVNVIEVKSPSTNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 EG +PLQTLRA IDYG A A T YG G+KV++ + EV S T P E Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWIY-KGEVLKSAKTAPKKE 230 >gi|315037536|ref|YP_004031104.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1112] gi|325956009|ref|YP_004286619.1| 30S ribosomal protein S3 [Lactobacillus acidophilus 30SC] gi|312275669|gb|ADQ58309.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1112] gi|325332574|gb|ADZ06482.1| 30S ribosomal protein S3 [Lactobacillus acidophilus 30SC] gi|327182832|gb|AEA31279.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1118] Length = 224 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLRIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A I Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEVLPTRKNKPASKPAKGGNR 224 >gi|78357294|ref|YP_388743.1| 30S ribosomal protein S3 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|91207653|sp|Q30Z48|RS3_DESDG RecName: Full=30S ribosomal protein S3 gi|78219699|gb|ABB39048.1| SSU ribosomal protein S3P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 213 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 147/208 (70%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ EY + + ED IR+Y++ L AG++KI IER Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYASFVFEDHNIRKYVKKTLYHAGLSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L + E + VNE+ +PE +A L+A++I Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRADLRRKFSREFSIEVNEIRRPETDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA Sbjct: 120 AMQLERRVAFRRAMKRTVSMSRKFGAEGIKVACAGRLAGAEIARSEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGYAEAHTTYGIIGVKVWIFKGEIL 207 >gi|15674075|ref|NP_268250.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis Il1403] gi|27734532|sp|Q9CDW8|RS3_LACLA RecName: Full=30S ribosomal protein S3 gi|12725147|gb|AAK06191.1|AE006438_5 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis Il1403] Length = 217 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+++W+A EY LHEDL IR+ +Q L A V+ I ER Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYSDYLHEDLAIRQLIQTKLADASVSLIETERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ KP+++A L+ + I Sbjct: 60 INKVIVTLHTAKPGMVIGKSGANVDALRAELNKLTGKQVHINIVEIKKPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 AKQLEARIAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY A+T YG G+KV++ + + S Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKSVKGEK 217 >gi|295103931|emb|CBL01475.1| SSU ribosomal protein S3P [Faecalibacterium prausnitzii SL3/3] Length = 234 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 13/231 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLIEDHKIRTELKAQLKDAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + +Y A+PG++IGK G + ++ KL+ + ++V EV P NA Sbjct: 61 VDPSTSAPRVNVNIYCAKPGMVIGKGGEERIALQNKLTKEYGKTVIVNVIEVKSPSTNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 EG +PLQTLRA IDYG A A T YG G+KV++ + EV S T P E Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWIY-KGEVLKSAKTAPKKE 230 >gi|296130489|ref|YP_003637739.1| ribosomal protein S3 [Cellulomonas flavigena DSM 20109] gi|296022304|gb|ADG75540.1| ribosomal protein S3 [Cellulomonas flavigena DSM 20109] Length = 276 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 104/229 (45%), Positives = 151/229 (65%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP+ +RLG+ SRWFA G Y + ED++IR+ + L++AG+AK+ Sbjct: 1 MGQKVNPLGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SRTE Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRTEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 TLRA+IDYG A T +G G+KV+V D +++ + A + Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWVYKGD-MTEKEWAREQASQAPRPQ 228 >gi|288574668|ref|ZP_06393025.1| ribosomal protein S3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570409|gb|EFC91966.1| ribosomal protein S3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 227 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 96/207 (46%), Positives = 148/207 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ +R+GV W SRWFA G Y LHEDLK+R++++ A ++K+ IER Sbjct: 1 MGQKVHPVGYRVGVIRDWESRWFADGKNYAKNLHEDLKLRDWIKARWDGASISKVEIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R +++ARPG++IGK G++I+K++++L MT S++ ++V E+ PE+ A L+A+++ Sbjct: 61 GKVIRFSIWTARPGVVIGKGGSEIQKVKEELQAMTGSKVMINVQEIKNPEVEAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LE RV FRRAMK+++ M+ G G+K+ +GRL GAE++RTE Y EG++PL TLRA Sbjct: 121 AAALEHRVSFRRAMKQSIFRTMKAGGKGIKIQCAGRLGGAEIARTEWYNEGQLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A A+T YG G+KV++ ++ Sbjct: 181 DIDYGLAEAKTMYGVIGVKVWIYRDEK 207 >gi|282855202|ref|ZP_06264534.1| ribosomal protein S3 [Propionibacterium acnes J139] gi|282581790|gb|EFB87175.1| ribosomal protein S3 [Propionibacterium acnes J139] gi|314924179|gb|EFS88010.1| ribosomal protein S3 [Propionibacterium acnes HL001PA1] gi|314965089|gb|EFT09188.1| ribosomal protein S3 [Propionibacterium acnes HL082PA2] gi|314982257|gb|EFT26350.1| ribosomal protein S3 [Propionibacterium acnes HL110PA3] gi|315090444|gb|EFT62420.1| ribosomal protein S3 [Propionibacterium acnes HL110PA4] gi|315093679|gb|EFT65655.1| ribosomal protein S3 [Propionibacterium acnes HL060PA1] gi|327326706|gb|EGE68492.1| ribosomal protein S3 [Propionibacterium acnes HL103PA1] Length = 269 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 143/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIRE L +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRELLHKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|255324742|ref|ZP_05365856.1| ribosomal protein S3 [Corynebacterium tuberculostearicum SK141] gi|311740071|ref|ZP_07713905.1| 30S ribosomal protein S3 [Corynebacterium pseudogenitalium ATCC 33035] gi|255298217|gb|EET77520.1| ribosomal protein S3 [Corynebacterium tuberculostearicum SK141] gi|311305144|gb|EFQ81213.1| 30S ribosomal protein S3 [Corynebacterium pseudogenitalium ATCC 33035] Length = 247 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 104/215 (48%), Positives = 147/215 (68%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P RLG+ W + WFA +Y + ED+KIR YL L +AG+A ++IERT Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRNYLNKGLDRAGIADVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+A SI Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAHSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SR E Y EGRVPL TLR Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRVERYHEGRVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA A T +G GIKV++ D V + Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214 >gi|238855074|ref|ZP_04645402.1| ribosomal protein S3 [Lactobacillus jensenii 269-3] gi|256852042|ref|ZP_05557429.1| ribosomal protein S3 [Lactobacillus jensenii 27-2-CHN] gi|260661389|ref|ZP_05862302.1| ribosomal protein S3 [Lactobacillus jensenii 115-3-CHN] gi|260664859|ref|ZP_05865710.1| ribosomal protein S3 [Lactobacillus jensenii SJ-7A-US] gi|282932131|ref|ZP_06337586.1| ribosomal protein S3 [Lactobacillus jensenii 208-1] gi|282932830|ref|ZP_06338229.1| ribosomal protein S3 [Lactobacillus jensenii 208-1] gi|297205083|ref|ZP_06922479.1| 30S ribosomal protein S3 [Lactobacillus jensenii JV-V16] gi|313472589|ref|ZP_07813078.1| ribosomal protein S3 [Lactobacillus jensenii 1153] gi|238832318|gb|EEQ24627.1| ribosomal protein S3 [Lactobacillus jensenii 269-3] gi|256615454|gb|EEU20644.1| ribosomal protein S3 [Lactobacillus jensenii 27-2-CHN] gi|260547844|gb|EEX23821.1| ribosomal protein S3 [Lactobacillus jensenii 115-3-CHN] gi|260561342|gb|EEX27315.1| ribosomal protein S3 [Lactobacillus jensenii SJ-7A-US] gi|281303046|gb|EFA95249.1| ribosomal protein S3 [Lactobacillus jensenii 208-1] gi|281303741|gb|EFA95888.1| ribosomal protein S3 [Lactobacillus jensenii 208-1] gi|297149661|gb|EFH29958.1| 30S ribosomal protein S3 [Lactobacillus jensenii JV-V16] gi|313448946|gb|EFR61264.1| ribosomal protein S3 [Lactobacillus jensenii 1153] Length = 224 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ FRLGVN W ++WFA +Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPLGFRLGVNRDWEAKWFAD-KDYKETLNEDLRIRDFVAKKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ S+ Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTEKQVHINIVEIKKPDLDAELVGDSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q AMR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRAMRAGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV+++ + + + + + K Sbjct: 180 DIDYAWVQALTTYGQIGVKVWINRGEILPGRKNRPASKRSKGGNK 224 >gi|238563917|ref|ZP_00438025.2| 30S ribosomal protein S3 [Burkholderia mallei GB8 horse 4] gi|238519670|gb|EEP83139.1| 30S ribosomal protein S3 [Burkholderia mallei GB8 horse 4] Length = 202 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 111/201 (55%), Positives = 152/201 (75%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVY 201 IDY T+ A+T YG G+KV+ Sbjct: 181 DIDYATSEAKTTYGIIGVKVW 201 >gi|118474301|ref|YP_891250.1| 30S ribosomal protein S3 [Campylobacter fetus subsp. fetus 82-40] gi|152060852|sp|A0RM17|RS3_CAMFF RecName: Full=30S ribosomal protein S3 gi|118413527|gb|ABK81947.1| ribosomal protein S3 [Campylobacter fetus subsp. fetus 82-40] Length = 232 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 109/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSKATLPENIGEDYKIRKFLKTKLYYAGVSQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG +IE +R +++ + N +I +++ E K +A L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGGEIENLRSEVTKLVNKDIAINIKEERKAGSSAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A + GA G+KV +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKVSVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + +D + + R + Sbjct: 181 RIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQADKNEDTSPKKPRRARRG 231 >gi|298345466|ref|YP_003718153.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 43063] gi|304391022|ref|ZP_07372974.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655875|ref|ZP_07908773.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 51333] gi|315656199|ref|ZP_07909090.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235527|gb|ADI66659.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 43063] gi|304325905|gb|EFL93151.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315489939|gb|EFU79566.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 51333] gi|315493201|gb|EFU82801.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 273 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 146/210 (69%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK++P FRLGV SRWFA G Y + ED++IR +Q L++AG++K+ Sbjct: 1 MGQKVHPTGFRLGVTAEHRSRWFADSTKSGQRYRDFVKEDVEIRRLMQDKLERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT + +Y+ARPG++IG++G + +++R +L +T ++ L++ EV P+++A L+ Sbjct: 61 IERTRDRVSVDLYTARPGIVIGRRGAEADRLRAQLEKLTGKQVQLNIREVKNPDLDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQSIAEQLSARVSFRRAMRKGMQSAQRGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA+IDYG A T +G G+KV++ D Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGD 210 >gi|291286318|ref|YP_003503134.1| 30S ribosomal protein S3 [Denitrovibrio acetiphilus DSM 12809] gi|290883478|gb|ADD67178.1| ribosomal protein S3 [Denitrovibrio acetiphilus DSM 12809] Length = 217 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 114/215 (53%), Positives = 156/215 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GVN W S W+A EY L ED++IR++L+ L QAG+++I IER Sbjct: 1 MGQKVNPNGFRVGVNKPWKSVWYANKKEYRQQLLEDIRIRKFLKDRLMQAGLSRIGIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI + ++RPG++IGKKG++I+K++K+L T SE+ L + EV KPEINA L+A++I Sbjct: 61 GTRVRITLNTSRPGIVIGKKGSEIDKLKKELKKFTKSEVLLVIREVKKPEINAVLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q++RRV FRRAMK+AV AM+ GA G++V +GRL GA+++RTE Y++GRVPLQTLRA Sbjct: 121 AMQIQRRVAFRRAMKKAVLQAMKSGALGIRVACAGRLAGADMARTEWYIKGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYGT A T YG GIKV+V + + D S Sbjct: 181 DIDYGTTEAMTTYGIIGIKVWVFTGEVLEDRKSEA 215 >gi|70725809|ref|YP_252723.1| 30S ribosomal protein S3 [Staphylococcus haemolyticus JCSC1435] gi|91207842|sp|Q4L8A8|RS3_STAHJ RecName: Full=30S ribosomal protein S3 gi|68446533|dbj|BAE04117.1| 30S ribosomal protein S3 [Staphylococcus haemolyticus JCSC1435] Length = 217 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDL+IR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLRIRKFIDNELKEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVIEIKKIDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|182418828|ref|ZP_02950093.1| ribosomal protein S3 [Clostridium butyricum 5521] gi|237666868|ref|ZP_04526853.1| ribosomal protein S3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377325|gb|EDT74886.1| ribosomal protein S3 [Clostridium butyricum 5521] gi|237658067|gb|EEP55622.1| ribosomal protein S3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 222 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 142/219 (64%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WN++W+A + L ED K+R++++ L AG++KI IER Sbjct: 1 MGQKVNPHGLRVGVIKGWNAKWYANKKNFADNLIEDNKVRKFVKKELFSAGISKIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR-KKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +Y+A+PG+IIGK G IE ++ K ++N + +++ EV E +A L+A++ Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGAGIEALKGKLTQYISNKNVLINIVEVKSAEADAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMKHGIKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 A IDYG A A+T YG G+KV+V + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVVEKEE 219 >gi|326799133|ref|YP_004316952.1| ribosomal protein S3 [Sphingobacterium sp. 21] gi|326549897|gb|ADZ78282.1| ribosomal protein S3 [Sphingobacterium sp. 21] Length = 267 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 146/212 (68%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A + Sbjct: 60 LKRLTVTIHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAQLVADGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++RTE Y EGR+PL T RA Sbjct: 120 AKQLEARISFRRAMKTTIASTMRMGAEGIKIMCSGRLGGAEMARTEQYKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEAHTTYGKIGVKVWICKGEVYGKRD 211 >gi|242309325|ref|ZP_04808480.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489] gi|239523896|gb|EEQ63762.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489] Length = 235 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 114/220 (51%), Positives = 151/220 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV+ ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAFTTAPQNIAEDYKIRKFLKKELYYAGVSDILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ V +ARPG+IIGKKG D+EK+++ L + N +I L++ EV KP+ NA L A+S+ Sbjct: 61 ARKVRVTVVAARPGIIIGKKGADVEKLKESLKKIVNKDIFLNIKEVKKPQSNAQLSAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA Sbjct: 121 ATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG+ G+KV++ + + E Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQAEKQQEE 220 >gi|148238764|ref|YP_001224151.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7803] gi|189045372|sp|A5GIT9|RS3_SYNPW RecName: Full=30S ribosomal protein S3 gi|147847303|emb|CAK22854.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7803] Length = 243 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPTLLKEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + N ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDPNRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223 LRA IDY T VA T YG GIKV+V + + D + A R Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAQQQLPVGATPRRRA 229 >gi|237753017|ref|ZP_04583497.1| 30s ribosomal protein s3 [Helicobacter winghamensis ATCC BAA-430] gi|229375284|gb|EEO25375.1| 30s ribosomal protein s3 [Helicobacter winghamensis ATCC BAA-430] Length = 235 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 111/220 (50%), Positives = 151/220 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L A V+ ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAFNSAPQNIAEDYKIRKFLKKELYYASVSDILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG D+EK+++ L + N +I +++ EV KP+ NA L A+S+ Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKESLKKIVNKDIFINIKEVKKPQSNAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ +Q A++ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA Sbjct: 121 ATQLERRIAFRRAMKKVMQGAIKSGAKGIKVRVSGRLAGAEMARTEWYMEGRIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG+ G+KV++ + + + E Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQSEKQNED 220 >gi|46579720|ref|YP_010528.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris str. Hildenborough] gi|120602803|ref|YP_967203.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris DP4] gi|61215611|sp|Q72CH4|RS3_DESVH RecName: Full=30S ribosomal protein S3 gi|152060859|sp|A1VEB0|RS3_DESVV RecName: Full=30S ribosomal protein S3 gi|46449135|gb|AAS95787.1| ribosomal protein S3 [Desulfovibrio vulgaris str. Hildenborough] gi|120563032|gb|ABM28776.1| SSU ribosomal protein S3P [Desulfovibrio vulgaris DP4] gi|311233511|gb|ADP86365.1| ribosomal protein S3 [Desulfovibrio vulgaris RCH1] Length = 212 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 108/206 (52%), Positives = 145/206 (70%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRW++ EY A + ED IR++++ L AG+AKI IER Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWYS-KKEYPAFVFEDHNIRKFVKKTLYHAGLAKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E + VNE+ +PE+ + L+A++I Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRADLRKKFKREFAIEVNEIRRPEVESQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V A +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 ALQLERRVAFRRAMKRTVSMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 ID+G A A T YG G+KV++ + Sbjct: 180 DIDFGFAEARTTYGVIGVKVWIFKGE 205 >gi|118443821|ref|YP_877204.1| 30S ribosomal protein S3 [Clostridium novyi NT] gi|152060856|sp|A0PXV2|RS3_CLONN RecName: Full=30S ribosomal protein S3 gi|118134277|gb|ABK61321.1| ribosomal protein S3 [Clostridium novyi NT] Length = 221 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR++++ AG+AKI IERT Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANSQNFADNLIEDDKIRKFVKKRSYSAGIAKIEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K +I +++ +PG+IIGK G IE+++ ++ M + +++ EV +PE +A L+A++ Sbjct: 61 AKRVKINIHTGKPGMIIGKGGKGIEELKSEILKMIKEKNVIINIVEVKRPETDAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLE+R+ FRRAMK+ +Q AMR GA GVK SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMRSGAKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A A+T YG G+KV++ + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYKGEVLPTKKVRTEEISQ 221 >gi|57238708|ref|YP_179839.1| 30S ribosomal protein S3 [Campylobacter jejuni RM1221] gi|86149245|ref|ZP_01067476.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86152293|ref|ZP_01070504.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 260.94] gi|86153025|ref|ZP_01071230.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|88596276|ref|ZP_01099513.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 84-25] gi|121612744|ref|YP_001001345.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926792|ref|ZP_01810471.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157415923|ref|YP_001483179.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81116] gi|167006234|ref|ZP_02271992.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81-176] gi|205355715|ref|ZP_03222485.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563287|ref|YP_002345067.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956157|ref|ZP_06373642.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 1336] gi|315125088|ref|YP_004067092.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|27734540|sp|Q9PLX7|RS3_CAMJE RecName: Full=30S ribosomal protein S3 gi|81675524|sp|Q5HS96|RS3_CAMJR RecName: Full=30S ribosomal protein S3 gi|152060853|sp|A1W1V4|RS3_CAMJJ RecName: Full=30S ribosomal protein S3 gi|172047265|sp|A8FP15|RS3_CAMJ8 RecName: Full=30S ribosomal protein S3 gi|57167512|gb|AAW36291.1| ribosomal protein S3 [Campylobacter jejuni RM1221] gi|85840027|gb|EAQ57285.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840782|gb|EAQ58033.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 260.94] gi|85843910|gb|EAQ61120.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249801|gb|EAQ72760.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81-176] gi|88191117|gb|EAQ95089.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360994|emb|CAL35795.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844517|gb|EDK21624.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CG8486] gi|157386887|gb|ABV53202.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81116] gi|205346492|gb|EDZ33125.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CG8421] gi|283792311|gb|EFC31095.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 1336] gi|284926892|gb|ADC29244.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni IA3902] gi|307748561|gb|ADN91831.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni M1] gi|315018810|gb|ADT66903.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315059147|gb|ADT73476.1| SSU ribosomal protein S3p [Campylobacter jejuni subsp. jejuni S3] gi|315926628|gb|EFV06008.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930387|gb|EFV09463.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 305] gi|315931331|gb|EFV10300.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 327] Length = 233 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ +RK+L ++ ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIKEERKAGASAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + ++ + PA + R + Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAPAKKPRRTRRG 232 >gi|291547988|emb|CBL21096.1| SSU ribosomal protein S3P [Ruminococcus sp. SR1/5] Length = 218 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 141/211 (66%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A + L ED IR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAEDK-FADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGAEIEKVKAELQKYTDKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K ++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKAWIYNGEILPTK 210 >gi|227509937|ref|ZP_03939986.1| 30S ribosomal protein S3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512870|ref|ZP_03942919.1| 30S ribosomal protein S3 [Lactobacillus buchneri ATCC 11577] gi|227522998|ref|ZP_03953047.1| 30S ribosomal protein S3 [Lactobacillus hilgardii ATCC 8290] gi|227083870|gb|EEI19182.1| 30S ribosomal protein S3 [Lactobacillus buchneri ATCC 11577] gi|227089816|gb|EEI25128.1| 30S ribosomal protein S3 [Lactobacillus hilgardii ATCC 8290] gi|227190543|gb|EEI70610.1| 30S ribosomal protein S3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 221 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 148/219 (67%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP R+G+ W ++W+A G +Y A L EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGNKINPNGLRVGIIRDWEAKWYA-GKDYAAYLREDLQIRKYIEKRLANASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+N+T +H+++ E+ KP+++A L+ ++I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVESLRKELNNLTGKRVHINIIEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++A+Q MR GA G+K +GRLNGA+++R E Y +G VPL TLRA Sbjct: 120 ARQLEGRVAFRRAMRQAMQRTMRAGAKGIKTQVAGRLNGADMARVESYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A T YGS G+K ++ + + + A + Sbjct: 180 DIDYSWVEAFTTYGSIGVKTWIYRGEILPEKPKNSEADK 218 >gi|199598838|ref|ZP_03212249.1| Ribosomal protein S3 [Lactobacillus rhamnosus HN001] gi|229552714|ref|ZP_04441439.1| ribosomal protein S3 [Lactobacillus rhamnosus LMS2-1] gi|258509476|ref|YP_003172227.1| 30S ribosomal protein S3P [Lactobacillus rhamnosus GG] gi|258540673|ref|YP_003175172.1| 30S ribosomal protein S3P [Lactobacillus rhamnosus Lc 705] gi|199590250|gb|EDY98345.1| Ribosomal protein S3 [Lactobacillus rhamnosus HN001] gi|229313920|gb|EEN79893.1| ribosomal protein S3 [Lactobacillus rhamnosus LMS2-1] gi|257149403|emb|CAR88376.1| SSU/30S ribosomal protein S3P [Lactobacillus rhamnosus GG] gi|257152349|emb|CAR91321.1| SSU/30S ribosomal protein S3P [Lactobacillus rhamnosus Lc 705] gi|259650755|dbj|BAI42917.1| 30S ribosomal protein S3 [Lactobacillus rhamnosus GG] gi|328478161|gb|EGF48007.1| 30S ribosomal protein S3 [Lactobacillus rhamnosus MTCC 5462] Length = 220 Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats. Identities = 98/218 (44%), Positives = 152/218 (69%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A ++ LHED++IR ++ L+ A V++I IER Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFADYLHEDIEIRNFINKKLQDASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 AKRVNISVHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY A T YG GIK +++ + + + A Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPQQNNAK 217 >gi|325282646|ref|YP_004255187.1| ribosomal protein S3 [Deinococcus proteolyticus MRP] gi|324314455|gb|ADY25570.1| ribosomal protein S3 [Deinococcus proteolyticus MRP] Length = 259 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 110/227 (48%), Positives = 141/227 (62%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLGV WNSRW+A Y +L ED KIR+ + L+ AG+A+I IER Sbjct: 1 MGNKINPNGFRLGVTRGWNSRWYAGKKNYSQMLREDEKIRQLVHKELQAAGIARIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +I+ +A+PG++IGK G I+ IR+ + NM + ++V E+P P +A L+A Sbjct: 61 GQQINVIISAAKPGIVIGKGGESIKAIRQSIENMVEAGTVAVNVAEIPNPNTSAPLVALR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+ERR FRRAMK+A Q M GA G KVI SGRL GAE +RTE LEGRVPL TLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGCKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYGTA A T YG GIKV V + + + R + Sbjct: 181 ADIDYGTATASTTYGQLGIKVLVFNGEVIGGRTEGTQSRSARPANNE 227 >gi|242371891|ref|ZP_04817465.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W1] gi|242350398|gb|EES41999.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W1] Length = 217 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|315103973|gb|EFT75949.1| ribosomal protein S3 [Propionibacterium acnes HL050PA2] Length = 269 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202] gi|289424825|ref|ZP_06426607.1| ribosomal protein S3 [Propionibacterium acnes SK187] gi|289427613|ref|ZP_06429325.1| ribosomal protein S3 [Propionibacterium acnes J165] gi|295131381|ref|YP_003582044.1| ribosomal protein S3 [Propionibacterium acnes SK137] gi|61215506|sp|Q6A6N2|RS3_PROAC RecName: Full=30S ribosomal protein S3 gi|50840914|gb|AAT83581.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202] gi|289154788|gb|EFD03471.1| ribosomal protein S3 [Propionibacterium acnes SK187] gi|289159104|gb|EFD07296.1| ribosomal protein S3 [Propionibacterium acnes J165] gi|291377272|gb|ADE01127.1| ribosomal protein S3 [Propionibacterium acnes SK137] gi|313763232|gb|EFS34596.1| ribosomal protein S3 [Propionibacterium acnes HL013PA1] gi|313773091|gb|EFS39057.1| ribosomal protein S3 [Propionibacterium acnes HL074PA1] gi|313793264|gb|EFS41322.1| ribosomal protein S3 [Propionibacterium acnes HL110PA1] gi|313801092|gb|EFS42360.1| ribosomal protein S3 [Propionibacterium acnes HL110PA2] gi|313808833|gb|EFS47287.1| ribosomal protein S3 [Propionibacterium acnes HL087PA2] gi|313810373|gb|EFS48087.1| ribosomal protein S3 [Propionibacterium acnes HL083PA1] gi|313812291|gb|EFS50005.1| ribosomal protein S3 [Propionibacterium acnes HL025PA1] gi|313816568|gb|EFS54282.1| ribosomal protein S3 [Propionibacterium acnes HL059PA1] gi|313818013|gb|EFS55727.1| ribosomal protein S3 [Propionibacterium acnes HL046PA2] gi|313819926|gb|EFS57640.1| ribosomal protein S3 [Propionibacterium acnes HL036PA1] gi|313823416|gb|EFS61130.1| ribosomal protein S3 [Propionibacterium acnes HL036PA2] gi|313824888|gb|EFS62602.1| ribosomal protein S3 [Propionibacterium acnes HL063PA1] gi|313830130|gb|EFS67844.1| ribosomal protein S3 [Propionibacterium acnes HL007PA1] gi|313832599|gb|EFS70313.1| ribosomal protein S3 [Propionibacterium acnes HL056PA1] gi|313837955|gb|EFS75669.1| ribosomal protein S3 [Propionibacterium acnes HL086PA1] gi|314914338|gb|EFS78169.1| ribosomal protein S3 [Propionibacterium acnes HL005PA4] gi|314917658|gb|EFS81489.1| ribosomal protein S3 [Propionibacterium acnes HL050PA1] gi|314919610|gb|EFS83441.1| ribosomal protein S3 [Propionibacterium acnes HL050PA3] gi|314925782|gb|EFS89613.1| ribosomal protein S3 [Propionibacterium acnes HL036PA3] gi|314930201|gb|EFS94032.1| ribosomal protein S3 [Propionibacterium acnes HL067PA1] gi|314957192|gb|EFT01296.1| ribosomal protein S3 [Propionibacterium acnes HL027PA1] gi|314957768|gb|EFT01871.1| ribosomal protein S3 [Propionibacterium acnes HL002PA1] gi|314960862|gb|EFT04963.1| ribosomal protein S3 [Propionibacterium acnes HL002PA2] gi|314963536|gb|EFT07636.1| ribosomal protein S3 [Propionibacterium acnes HL082PA1] gi|314969881|gb|EFT13979.1| ribosomal protein S3 [Propionibacterium acnes HL037PA1] gi|314973021|gb|EFT17117.1| ribosomal protein S3 [Propionibacterium acnes HL053PA1] gi|314975517|gb|EFT19612.1| ribosomal protein S3 [Propionibacterium acnes HL045PA1] gi|314979741|gb|EFT23835.1| ribosomal protein S3 [Propionibacterium acnes HL072PA2] gi|314984893|gb|EFT28985.1| ribosomal protein S3 [Propionibacterium acnes HL005PA1] gi|314988675|gb|EFT32766.1| ribosomal protein S3 [Propionibacterium acnes HL005PA3] gi|315077159|gb|EFT49226.1| ribosomal protein S3 [Propionibacterium acnes HL053PA2] gi|315079844|gb|EFT51820.1| ribosomal protein S3 [Propionibacterium acnes HL078PA1] gi|315083212|gb|EFT55188.1| ribosomal protein S3 [Propionibacterium acnes HL027PA2] gi|315086834|gb|EFT58810.1| ribosomal protein S3 [Propionibacterium acnes HL002PA3] gi|315089927|gb|EFT61903.1| ribosomal protein S3 [Propionibacterium acnes HL072PA1] gi|315096751|gb|EFT68727.1| ribosomal protein S3 [Propionibacterium acnes HL038PA1] gi|315097979|gb|EFT69955.1| ribosomal protein S3 [Propionibacterium acnes HL059PA2] gi|315100622|gb|EFT72598.1| ribosomal protein S3 [Propionibacterium acnes HL046PA1] gi|315106067|gb|EFT78043.1| ribosomal protein S3 [Propionibacterium acnes HL030PA1] gi|315109226|gb|EFT81202.1| ribosomal protein S3 [Propionibacterium acnes HL030PA2] gi|327325165|gb|EGE66971.1| ribosomal protein S3 [Propionibacterium acnes HL096PA3] gi|327325205|gb|EGE67010.1| ribosomal protein S3 [Propionibacterium acnes HL096PA2] gi|327332715|gb|EGE74449.1| ribosomal protein S3 [Propionibacterium acnes HL097PA1] gi|327444006|gb|EGE90660.1| ribosomal protein S3 [Propionibacterium acnes HL043PA1] gi|327449366|gb|EGE96020.1| ribosomal protein S3 [Propionibacterium acnes HL013PA2] gi|327449406|gb|EGE96060.1| ribosomal protein S3 [Propionibacterium acnes HL043PA2] gi|327451427|gb|EGE98081.1| ribosomal protein S3 [Propionibacterium acnes HL087PA3] gi|327451598|gb|EGE98252.1| ribosomal protein S3 [Propionibacterium acnes HL092PA1] gi|327451885|gb|EGE98539.1| ribosomal protein S3 [Propionibacterium acnes HL083PA2] gi|328752099|gb|EGF65715.1| ribosomal protein S3 [Propionibacterium acnes HL087PA1] gi|328755505|gb|EGF69121.1| ribosomal protein S3 [Propionibacterium acnes HL025PA2] gi|328756289|gb|EGF69905.1| ribosomal protein S3 [Propionibacterium acnes HL020PA1] gi|328761377|gb|EGF74904.1| ribosomal protein S3 [Propionibacterium acnes HL099PA1] Length = 269 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|34811531|pdb|1PNS|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811587|pdb|1PNX|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966325|pdb|1VOQ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966378|pdb|1VOS|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966431|pdb|1VOV|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966484|pdb|1VOX|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966537|pdb|1VOZ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|300508607|pdb|3MR8|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508662|pdb|3MS0|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|322812552|pdb|3PYN|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812605|pdb|3PYQ|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812658|pdb|3PYS|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812711|pdb|3PYU|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 206 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 100/206 (48%), Positives = 138/206 (66%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 +Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+ Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180 Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A+A T YG G+K Y+ L + Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEV 206 >gi|314929566|gb|EFS93397.1| ribosomal protein S3 [Propionibacterium acnes HL044PA1] gi|328906224|gb|EGG25999.1| 30S ribosomal protein S3 [Propionibacterium sp. P08] Length = 269 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 145/207 (70%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIR++LQ +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRKWLQKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKTPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|313836027|gb|EFS73741.1| ribosomal protein S3 [Propionibacterium acnes HL037PA2] gi|314970549|gb|EFT14647.1| ribosomal protein S3 [Propionibacterium acnes HL037PA3] Length = 277 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 145/207 (70%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIR++LQ +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRKWLQKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKTPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|28377838|ref|NP_784730.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1] gi|300767827|ref|ZP_07077737.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180017|ref|YP_003924145.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258338|sp|Q88XY0|RS3_LACPL RecName: Full=30S ribosomal protein S3 gi|28270671|emb|CAD63577.1| ribosomal protein S3 [Lactobacillus plantarum WCFS1] gi|300494812|gb|EFK29970.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045508|gb|ADN98051.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 217 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W ++W+A ++ A L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLNEDLRIRKYIEQRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+N+T +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEALRKELNNLTGKRVHINIIEIKKPDLDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM+ A+Q MR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEGRVAFRRAMRGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A T YG G+K ++ + + + S Sbjct: 180 DIDYSWVEARTTYGKLGVKTWIYRGEILPEKKSAK 214 >gi|153812870|ref|ZP_01965538.1| hypothetical protein RUMOBE_03277 [Ruminococcus obeum ATCC 29174] gi|149831082|gb|EDM86171.1| hypothetical protein RUMOBE_03277 [Ruminococcus obeum ATCC 29174] gi|295109483|emb|CBL23436.1| SSU ribosomal protein S3P [Ruminococcus obeum A2-162] Length = 218 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++ L ED IR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-ADFADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G++IEK++ +L T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGSEIEKVKAELQKYTDKKLIVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K +V + + Sbjct: 180 DIDYGFAEADTTYGKVGVKAWVYNGEVLPTK 210 >gi|116493157|ref|YP_804892.1| SSU ribosomal protein S3P [Pediococcus pentosaceus ATCC 25745] gi|122265379|sp|Q03EC2|RS3_PEDPA RecName: Full=30S ribosomal protein S3 gi|116103307|gb|ABJ68450.1| SSU ribosomal protein S3P [Pediococcus pentosaceus ATCC 25745] Length = 223 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W ++W+A ++ L ED+KIRE++ L A V+ + IER Sbjct: 1 MGQKVNPNGFRVGVIRDWQAKWYAD-KDFSKFLAEDIKIREFIAKQLTDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++EK+R +L+ +T +H+++ E+ KP++ A L+ ++I Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEKLRNQLNQLTGKRVHINIVEIKKPDLEAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE RV FRRAMK+A+Q +MR GA G+K +GRLNGA++SR E Y EG+VPL TLRA Sbjct: 120 AAQLEGRVAFRRAMKQAMQRSMRSGAKGIKTQVAGRLNGADMSRVERYSEGKVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 +DY A T YG G+K ++ + + + ++ + Sbjct: 180 DVDYAWVEARTTYGQLGVKTWIYRGEILPEVKDAKKNSKEQ 220 >gi|87124968|ref|ZP_01080815.1| 30S ribosomal protein S3 [Synechococcus sp. RS9917] gi|86167288|gb|EAQ68548.1| 30S ribosomal protein S3 [Synechococcus sp. RS9917] Length = 243 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++++LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSRNYPTLLQEDDRIRKFIHKKYGAAGISEVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDLSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223 LRA IDY T VA T YG GIKV+V + + D + A R Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEARQQLPVGATPRRRA 229 >gi|303328088|ref|ZP_07358527.1| ribosomal protein S3 [Desulfovibrio sp. 3_1_syn3] gi|302861914|gb|EFL84849.1| ribosomal protein S3 [Desulfovibrio sp. 3_1_syn3] Length = 213 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 110/208 (52%), Positives = 148/208 (71%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ EY A ++ED KIR +++ L AG++KI IER Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYPAFVYEDSKIRAFVKKLLYHAGLSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE++A L+A++I Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRGDLRQKFGREFSLEVNEIRRPEVDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR V A +FG +G+KV +GRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCAGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 ID+G A A T YG G+KV++ + + Sbjct: 180 DIDFGFAEARTTYGIIGVKVWIYKGEIL 207 >gi|229823529|ref|ZP_04449598.1| hypothetical protein GCWU000282_00827 [Catonella morbi ATCC 51271] gi|229786973|gb|EEP23087.1| hypothetical protein GCWU000282_00827 [Catonella morbi ATCC 51271] Length = 218 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 146/216 (67%), Gaps = 1/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+++W+A + LHEDL IR++L LK+A V+ I IER Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAD-KNFAEYLHEDLAIRKFLYKKLKEASVSNIQIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++A+PG++IGK G++I+ +R +LS +T ++ ++V E+ +P ++A L+A+ I Sbjct: 60 ANRVIVSVHTAKPGMVIGKGGSEIDAVRAELSKLTGKKVFINVVEIKEPSLDAKLVAEDI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA K+A+Q M+ GA G+K + SGRLNGA+++R+E Y EG VPL TLR+ Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMKAGAQGIKTMVSGRLNGADIARSEAYSEGTVPLHTLRS 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A+T YG G+KV++ + ++ Sbjct: 180 DIDYAWEEADTTYGKLGVKVWICRGQVLPQKKNSEK 215 >gi|239636227|ref|ZP_04677231.1| ribosomal protein S3 [Staphylococcus warneri L37603] gi|239598243|gb|EEQ80736.1| ribosomal protein S3 [Staphylococcus warneri L37603] gi|330685147|gb|EGG96811.1| ribosomal protein S3 [Staphylococcus epidermidis VCU121] Length = 218 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 151/219 (68%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++I+K+R KL+ +T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIDKLRNKLNALTDKKVHINVIEIKKIDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDY A A+T YG G+KV++ + + + +T + Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTTKNTSEGGK 218 >gi|300857240|ref|YP_003782224.1| 30S ribosomal protein S3 [Clostridium ljungdahlii DSM 13528] gi|300437355|gb|ADK17122.1| 30S ribosomal protein S3 [Clostridium ljungdahlii DSM 13528] Length = 223 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 94/223 (42%), Positives = 141/223 (63%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + + ED KIR++++ AGV+KI IER Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNIVEDNKIRKFVKEKTAIAGVSKIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 K ++ V++A+PG+IIGK G I ++ ++ M T + +++ EV + E +A L+A++ Sbjct: 61 AKRVKLNVFTAKPGMIIGKGGQGINALKAEIQKMVTEKTVLINIVEVKQAEADAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++R E Y EG +PLQTLR Sbjct: 121 VALQLEKRISFRRAMKQTIQRAMKSGVKGVKTTCSGRLGGAEIARAESYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDYG A A T YG G+KV+V + + E + Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYRGEVLPAKKPVENKEEVKA 223 >gi|297192697|ref|ZP_06910095.1| 30S ribosomal protein S3 [Streptomyces pristinaespiralis ATCC 25486] gi|197721648|gb|EDY65556.1| 30S ribosomal protein S3 [Streptomyces pristinaespiralis ATCC 25486] Length = 276 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++ Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +++YG A+T +G G+KV++ D + ++ A R + + Sbjct: 180 NVEYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226 >gi|57504692|ref|ZP_00370770.1| ribosomal protein S3 [Campylobacter coli RM2228] gi|305432604|ref|ZP_07401765.1| 30S ribosomal protein S3 [Campylobacter coli JV20] gi|57019461|gb|EAL56156.1| ribosomal protein S3 [Campylobacter coli RM2228] gi|304444315|gb|EFM36967.1| 30S ribosomal protein S3 [Campylobacter coli JV20] Length = 233 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ +RK+L ++ ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIKEERKAGASAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + ++ + PA + R + Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGLQTEKTEESAPAKKQRRTRRS 232 >gi|223042333|ref|ZP_03612382.1| ribosomal protein S3 [Staphylococcus capitis SK14] gi|314934291|ref|ZP_07841650.1| ribosomal protein S3 [Staphylococcus caprae C87] gi|222443996|gb|EEE50092.1| ribosomal protein S3 [Staphylococcus capitis SK14] gi|313652221|gb|EFS15984.1| ribosomal protein S3 [Staphylococcus caprae C87] Length = 217 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKFIDKELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|32491298|ref|NP_871552.1| hypothetical protein WGLp549 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173138|sp|Q8D206|RS3_WIGBR RecName: Full=30S ribosomal protein S3 gi|25166505|dbj|BAC24695.1| rpsC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 236 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 109/227 (48%), Positives = 161/227 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ +W+S W+A E+ L D K+RE+L+ L +A V+K++IER Sbjct: 1 MGQKVNPNGIRLGIIKSWSSTWYANTKEFSKNLISDFKVREFLKKSLSKAYVSKLIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ RI +Y+ARPG++IG+KG D++K+RK++SN+T +S+ E+ +PE++A L++++I Sbjct: 61 AKSIRINIYTARPGIVIGRKGEDVDKLRKEISNITGVPAQISITEIKRPELDAKLVSENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR++FRRAMKRAVQ+A+R GA G+KV SGRL GAE++R E Y EGRVPL T RA Sbjct: 121 ASQLERRIMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARKEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY T+ A T YG G+KV + + + +S I ++ +K + Sbjct: 181 DIDYNTSEAHTTYGIIGVKVTIFKGEILGNSSPYINEKKYMPTKKGN 227 >gi|227888847|ref|ZP_04006652.1| 30S ribosomal protein S3 [Lactobacillus johnsonii ATCC 33200] gi|227850684|gb|EEJ60770.1| 30S ribosomal protein S3 [Lactobacillus johnsonii ATCC 33200] Length = 222 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER Sbjct: 1 MGQKINPNGFRLGVNRGWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTNKNVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T YG G+KV+++ E+ P+ + + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219 >gi|253580625|ref|ZP_04857889.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847996|gb|EES75962.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 218 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++ L ED IR +L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAD-ADFADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGAEIEKVKAELKKFTDKKLIVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K +V + + Sbjct: 180 DIDYGFAEADTTYGKVGVKAWVYNGEVLPTK 210 >gi|73661978|ref|YP_300759.1| 30S ribosomal protein S3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|91207843|sp|Q49ZG2|RS3_STAS1 RecName: Full=30S ribosomal protein S3 gi|72494493|dbj|BAE17814.1| 30S ribosomal protein S3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 217 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+Y+ L++A V+ + IER Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKYIDNALQEASVSHVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+++TN ++H++V E+ K +++A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNSLTNKKVHINVIEIKKVDLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKIGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 I Y A A+T YG G+KV++ + + +++ Sbjct: 180 DIGYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|218885193|ref|YP_002434514.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226697699|sp|B8DNA2|RS3_DESVM RecName: Full=30S ribosomal protein S3 gi|218756147|gb|ACL07046.1| ribosomal protein S3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 213 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 145/208 (69%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ EY + ED IR++++ L AG++KI IER Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKEYPGFVFEDHNIRKFVKKTLYHAGLSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E + VNE+ +PE+ A L+A++I Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRGDLRKKFKREFSIEVNEIRRPEVEAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR V + +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 ALQLERRVAFRRAMKRTVSMSRKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 ID+G A A T YG G+KV++ + + Sbjct: 180 DIDFGFAEARTTYGVIGVKVWIFKGEIL 207 >gi|323342795|ref|ZP_08083027.1| 30S ribosomal protein S3 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463907|gb|EFY09101.1| 30S ribosomal protein S3 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 258 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A ++ LLHED IR+Y+ +LK A V+++ IER+ Sbjct: 1 MGQKVHPIGMRVGVIRDWESRWYAE-KDFANLLHEDKLIRDYIFKNLKDAYVSRVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 II+ +ARPG++IG G +IEK++K ++ + + +++ V EV P+++A L+A++ Sbjct: 60 KNRVDIIIRTARPGVVIGVNGANIEKVKKDIAKISEGNTVNIKVLEVANPDLDAHLVARN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE+R FR A KR +Q MR GA G+K SGRL GA+++R+E Y EG VPL TLR Sbjct: 120 IAEQLEQRASFRTAQKRTIQRTMRAGAKGIKTAVSGRLGGADMARSEGYSEGIVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 + IDY A T +G G+KV++ + + P A Sbjct: 180 SDIDYAHYEANTQFGILGVKVWICRGEVLPGQKVQEPEAPK 220 >gi|206889473|ref|YP_002249239.1| ribosomal protein S3 [Thermodesulfovibrio yellowstonii DSM 11347] gi|226697770|sp|B5YG41|RS3_THEYD RecName: Full=30S ribosomal protein S3 gi|206741411|gb|ACI20468.1| ribosomal protein S3 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 216 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 151/211 (71%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ TW SRWFA Y L EDLK+R+ L+ L AG++KI IER Sbjct: 1 MGQKTNPIGNRLGIIRTWESRWFA-KKGYADQLIEDLKLRKMLKDKLYHAGISKIEIERV 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+++++ARPG+IIGKKG ++E+++K++ T + ++ + EV +PE++A L+A+++ Sbjct: 60 GEKVRVLIFAARPGIIIGKKGAEVERLKKEVEEKTGKQANIEIKEVRRPELDAQLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+RV +RRAMKRAV S+MRFGA G+KV +GRL GAE++RTE Y EGRVPL T RA Sbjct: 120 ALQIEKRVAYRRAMKRAVASSMRFGAKGIKVSCAGRLAGAEIARTEWYREGRVPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+KV++ + Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWIFKGEVQPGQ 210 >gi|313673461|ref|YP_004051572.1| SSU ribosomal protein s3p [Calditerrivibrio nitroreducens DSM 19672] gi|312940217|gb|ADR19409.1| SSU ribosomal protein S3P [Calditerrivibrio nitroreducens DSM 19672] Length = 219 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 111/219 (50%), Positives = 159/219 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI R+G+N TW S W+A +Y L ED+KIR+YL+ L QAG++ I IER Sbjct: 1 MGQKAHPIGLRIGINKTWKSVWYANKRDYRKNLSEDIKIRKYLKKKLNQAGISSIEIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ + ++RPG++IGKKG +I+K+++ L TN+++ +++ EV KPEI+ATLIA++I Sbjct: 61 GQKMRVNLNTSRPGIVIGKKGAEIDKLKQDLKAYTNADVQINIREVKKPEIDATLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERR+ FRRAMK+AV A++ GA G+KV SGRL GA+++RTE Y++GRVPLQTLRA Sbjct: 121 ALQIERRIAFRRAMKKAVVQALKSGALGIKVSCSGRLAGADMARTEWYIKGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 IDYGTA A T YG G+KV+V + + + + E Sbjct: 181 DIDYGTADAMTTYGIIGVKVWVFKGETLEEKNKNATEVE 219 >gi|290968238|ref|ZP_06559781.1| ribosomal protein S3 [Megasphaera genomosp. type_1 str. 28L] gi|290781720|gb|EFD94305.1| ribosomal protein S3 [Megasphaera genomosp. type_1 str. 28L] Length = 223 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 152/224 (67%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+N FR+GV W+++W+A +Y LL+ED+KIRE+L+ L AGV++I IER+ Sbjct: 1 MGQKVNAHGFRVGVVKPWDAKWYAE-KDYATLLNEDVKIREFLKKQLFIAGVSRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K ++I+++A+PG++IG+ G IE I+K L T+ + +++ E+ + E++ATL+A++I Sbjct: 60 AKRIKLIIHTAKPGMVIGRGGAGIEDIKKALKRFTSKAVDVNIAEIKQAELDATLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ V MR GA G+K++ SGRL GAE++R+E +G +PL TLRA Sbjct: 120 AGQLERRIGFRRAMKQCVGRTMRMGAKGIKIMCSGRLGGAEIARSESVRDGSIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A T YG GIK ++ + E+ P + E Sbjct: 180 DIDYGFAEAHTTYGCIGIKCWIY-KGEILPEAKQAPQKKREGSE 222 >gi|284053309|ref|ZP_06383519.1| 30S ribosomal protein S3 [Arthrospira platensis str. Paraca] gi|291567790|dbj|BAI90062.1| 30S ribosomal protein S3 [Arthrospira platensis NIES-39] Length = 242 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 147/226 (65%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV SRWFA +Y LL ED IR+Y+Q +L AG++ + IER Sbjct: 1 MGQKIHPIGFRLGVTQEHKSRWFADAGQYPQLLQEDYTIRQYIQKNLSNAGISDVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + V +ARPG+++G+ GT I+ +R+ L +N +I ++V EV + + +ATLIA+ Sbjct: 61 ADQIDLEVLTARPGVVVGRGGTGIDSLRQGLQKELGSNRQIRINVVEVSRVDADATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE+RV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 NIAAQLEKRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA IDY A T YG G+KV+V + + + T PA R + Sbjct: 181 RADIDYAYCTALTIYGILGVKVWVFKGEIIPGQEET-PAPNTRAPK 225 >gi|307244777|ref|ZP_07526878.1| ribosomal protein S3 [Peptostreptococcus stomatis DSM 17678] gi|306491875|gb|EFM63927.1| ribosomal protein S3 [Peptostreptococcus stomatis DSM 17678] Length = 264 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWFA E+G L ED +R L+ L AG+AKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANDRKEFGEFLKEDHVLRTSLKKELYSAGLAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ++ A+PG++IGK G IE ++K+L MT + L++ EV + +A L+A++ Sbjct: 61 SANKIKMDLHVAKPGVVIGKGGAGIEALKKRLETMTGKTVILNIIEVRNIDRDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQ +ERR+ FRRAMK+AVQ M+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IAQAIERRIAFRRAMKQAVQRTMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 + IDYG A A+T YG GIKV++ + + + +I E + Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEILPGRNVSIEREEKKA 223 >gi|225850741|ref|YP_002730975.1| ribosomal protein S3 [Persephonella marina EX-H1] gi|254764539|sp|C0QQM9|RS3_PERMH RecName: Full=30S ribosomal protein S3 gi|225646450|gb|ACO04636.1| ribosomal protein S3 [Persephonella marina EX-H1] Length = 227 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 107/224 (47%), Positives = 160/224 (71%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLGV W S+WFA +YG LLHED+KIR++++ KQAG+A ++IER Sbjct: 1 MGQKVHPIGFRLGVTKDWKSKWFADKKKYGQLLHEDVKIRKFVEERYKQAGIADVIIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + RI + +++PG++IG+KG ++E++ K L +TN ++ ++V+EV KPE+NA L+A+ Sbjct: 61 GEKVRIKILASKPGIVIGRKGAEVEELNKVLQAVTNAKDVTVNVDEVKKPELNAKLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLERRV RRAMKRA+ +AM+ GA G+KV GR+ G +L+R E ++ GR+PLQT+R Sbjct: 121 IALQLERRVSHRRAMKRAIDNAMKAGAKGIKVQVGGRIGGVDLARKEWFMAGRMPLQTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 A IDYGTA A T YG G+KV++ D++++ + + Sbjct: 181 ADIDYGTARASTKYGILGVKVWIYKGDKLAEQKEEVLKKIEEEL 224 >gi|310829579|ref|YP_003961936.1| hypothetical protein ELI_4029 [Eubacterium limosum KIST612] gi|308741313|gb|ADO38973.1| hypothetical protein ELI_4029 [Eubacterium limosum KIST612] Length = 239 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 153/224 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+N R+GV WN++W+A ++ L ED IR+Y++ QAG++KI+IER Sbjct: 1 MGQKVNAHGLRVGVIKDWNAKWYANDRDFADCLIEDHDIRKYIKASQFQAGISKIVIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++A+PG+IIGK G IE +R +L MT + +++ EV +++A LIA++I Sbjct: 61 GNKIKIHIHTAKPGMIIGKGGAGIEALRLELEKMTGKTVFINIVEVKNIDMDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+ +Q MR GA G+K + +GRLNGAE++RTE Y +G VP+QTLRA Sbjct: 121 AGQLERRISFRRAMKQCMQRTMRAGAKGIKTMVAGRLNGAEMARTEGYAQGNVPMQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +IDYG A A+T YG GIKV+V+ + ++ ++ + +E + Sbjct: 181 NIDYGFAEADTTYGKLGIKVWVNKGEILTGRENILAVSEEEDSK 224 >gi|313828370|gb|EFS66084.1| ribosomal protein S3 [Propionibacterium acnes HL063PA2] Length = 269 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIPLNILEVKSPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|257067054|ref|YP_003153310.1| 30S ribosomal protein S3 [Anaerococcus prevotii DSM 20548] gi|256798934|gb|ACV29589.1| ribosomal protein S3 [Anaerococcus prevotii DSM 20548] Length = 238 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 96/222 (43%), Positives = 147/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG++ I IER Sbjct: 1 MGQKVNPKGFRVGVIKDWDSKWFADKKDFSDLLVEDYNIRKIVKKEVYDAGISDIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 N +I V++ +PG++IGK G+ +E+++KKL + I ++V E+ +++A L+A++ Sbjct: 61 VNNLKITVFAGKPGMVIGKGGSGVEELKKKLEKVAPGRRIIINVEEIKYQDLSAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR Sbjct: 121 IANQLENRVAFRRAMKQSMQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A+IDYG A A+T YG G KV++ + + + + Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222 >gi|227894526|ref|ZP_04012331.1| 30S ribosomal protein S3 [Lactobacillus ultunensis DSM 16047] gi|227863685|gb|EEJ71106.1| 30S ribosomal protein S3 [Lactobacillus ultunensis DSM 16047] Length = 224 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 102/225 (45%), Positives = 153/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKENLNEDLRIRKFISEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A I Sbjct: 60 AKRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + K Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNK 224 >gi|314986059|gb|EFT30151.1| ribosomal protein S3 [Propionibacterium acnes HL005PA2] Length = 269 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEPERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG A T +G G+KV++ D Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206 >gi|283953688|ref|ZP_06371219.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 414] gi|283794729|gb|EFC33467.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 414] Length = 233 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 108/232 (46%), Positives = 157/232 (67%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ +RK+L ++ + ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLISKDVNINIKEERKAGASAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + ++ + PA + R + Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESTPAKKPRRTRRG 232 >gi|238853477|ref|ZP_04643855.1| ribosomal protein S3 [Lactobacillus gasseri 202-4] gi|300362383|ref|ZP_07058559.1| 30S ribosomal protein S3 [Lactobacillus gasseri JV-V03] gi|238833917|gb|EEQ26176.1| ribosomal protein S3 [Lactobacillus gasseri 202-4] gi|300353374|gb|EFJ69246.1| 30S ribosomal protein S3 [Lactobacillus gasseri JV-V03] Length = 222 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G ++E +RK+LS +T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTKKNVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T YG G+KV+++ E+ P+ + + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219 >gi|256830532|ref|YP_003159260.1| ribosomal protein S3 [Desulfomicrobium baculatum DSM 4028] gi|256579708|gb|ACU90844.1| ribosomal protein S3 [Desulfomicrobium baculatum DSM 4028] Length = 212 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 108/213 (50%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P FRLG N W SRWF+ Y + ED ++R+Y++ L AG++KI IER Sbjct: 1 MGHKVHPYGFRLGYNKNWKSRWFSDKK-YAEYVFEDSRLRKYVKEKLFHAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KG +IEK+R +L E + VNE+ +PE +A L+A+SI Sbjct: 60 ADKVRLILFTARPGIVIGRKGVEIEKLRAELKGKFAREFVIEVNEIRRPETDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRA+K+ + A +FGA G+KV GRL GAE++RTE EGRVPL TLRA Sbjct: 120 AQQLERRVAFRRAIKKTLGMAQKFGALGIKVQCGGRLGGAEIARTEWAREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 IDYG A+A+T YG G+KV+V + +S+ DS Sbjct: 180 DIDYGVALAKTTYGIIGVKVWVFKGEILSEVDS 212 >gi|153952472|ref|YP_001398980.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. doylei 269.97] gi|171769460|sp|A7H650|RS3_CAMJD RecName: Full=30S ribosomal protein S3 gi|152939918|gb|ABS44659.1| ribosomal protein S3 [Campylobacter jejuni subsp. doylei 269.97] Length = 233 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 152/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ +RK+L ++ + ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLISKDVNINIKEERKAGASAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + E +K Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAPAKKS 226 >gi|328951230|ref|YP_004368565.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884] gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884] Length = 247 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 104/221 (47%), Positives = 141/221 (63%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLG+ W SRW+A +Y ALL ED IRE + + G+A+I IER Sbjct: 1 MGNKINPIGFRLGITRDWESRWYAGKKDYAALLVEDRIIRELITREVYHGGIARIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 N + V++A+PG+IIG+ G I+++R +L N I L+V EVP P ++A L+AQ Sbjct: 61 ADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKRFPNRTISLNVQEVPNPNLSAPLVAQR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+Q+ERR RRA+K+AVQ M GA G KV+ SGR+ GAE +RTE GRVPL TLR Sbjct: 121 VAEQIERRFAVRRAIKQAVQRVMEAGAQGAKVVVSGRIGGAEQARTEWAALGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A+IDYG A+A T YG G+K Y+ L + + + + Sbjct: 181 ANIDYGFALAWTTYGVLGVKAYIFLGEVIGRQKTAAKPSPK 221 >gi|210135470|ref|YP_002301909.1| 30S ribosomal protein S3 [Helicobacter pylori P12] gi|226697718|sp|B6JNF1|RS3_HELP2 RecName: Full=30S ribosomal protein S3 gi|210133438|gb|ACJ08429.1| 30S ribosomal protein S3 [Helicobacter pylori P12] Length = 234 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVCVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|119484827|ref|ZP_01619309.1| 30S ribosomal protein S3 [Lyngbya sp. PCC 8106] gi|119457645|gb|EAW38769.1| 30S ribosomal protein S3 [Lyngbya sp. PCC 8106] Length = 242 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 105/220 (47%), Positives = 142/220 (64%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ FRLG+ SRWFA Y LL ED KIR+Y+Q +L AG++ + IER Sbjct: 1 MGQKINPVGFRLGITQEHKSRWFADAKHYPDLLQEDYKIRQYIQKNLSNAGISDVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + V +ARPG+++G+ GT IE +R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLEVLTARPGVVVGRGGTGIESLRVGLQKELGNNRQIRINVVEVARVDADARLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLE+RV FRR +++A+ A + G +G+KV SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLEKRVSFRRVVRQAITRAQKAGVEGIKVQVSGRLNGAEIARTEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 RA IDY A T YG GIKV+V + + + T +A Sbjct: 181 RADIDYAYCTALTIYGILGIKVWVFKGEIIPGQEETSNSA 220 >gi|254556023|ref|YP_003062440.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1] gi|254044950|gb|ACT61743.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1] Length = 217 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W ++W+A ++ A L+EDL+IR+Y++ L A V+ + IER Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLNEDLRIRKYIEQRLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+N+T+ +H+++ E+ KP+++A L+ +SI Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEALRKELNNLTSKRVHINIIEIKKPDLDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM+ A+Q MR GA G+K +GRLNGA++SR E Y +G VPL TLRA Sbjct: 120 ARQLEGRVAFRRAMRGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDY A T YG G+K ++ + + + S Sbjct: 180 DIDYSWVEARTTYGKLGVKTWIYRGEILPEKKSAK 214 >gi|295398294|ref|ZP_06808336.1| 30S ribosomal protein S3 [Aerococcus viridans ATCC 11563] gi|294973433|gb|EFG49218.1| 30S ribosomal protein S3 [Aerococcus viridans ATCC 11563] Length = 216 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 102/217 (47%), Positives = 149/217 (68%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W++RW+A ++ LHEDL IREY+ LK A V+++ IER Sbjct: 1 MGQKINPIGMRIGVIKDWDARWYAE-KDFADTLHEDLHIREYIAETLKDASVSQVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G++++ +RK L+N T ++H+++ E+ KPE++A L+ +SI Sbjct: 60 ANKVNVNIHTAKPGMVIGKGGSEVDALRKTLNNRTGKKVHINIVEIKKPELDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE RV FRRA K+A+Q M+ GA G+KV SGRLNGA+++R+E +EG VPL TLRA Sbjct: 120 AQQLENRVAFRRAQKQAIQRTMKSGAKGIKVQISGRLNGADMARSETQVEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDY A+T YG GIK +V + + + A Sbjct: 180 DIDYSWEEADTTYGKIGIKTWVCRGEILPTKNIQGEA 216 >gi|21672764|ref|NP_660831.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009194|sp|Q8K956|RS3_BUCAP RecName: Full=30S ribosomal protein S3 gi|21623411|gb|AAM68042.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 233 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 110/224 (49%), Positives = 157/224 (70%), Gaps = 1/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA ++ L D K+R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKKLVKASVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T ++++EV KPE++A L+++SI Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRINIAKITGVPAQINISEVRKPELDAKLVSESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 +IDY + A T YG G+KV++ + E+ STI E ++ Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIF-KGEILGGMSTIEKLEKSSIQ 223 >gi|153952867|ref|YP_001393632.1| 30S ribosomal protein S3 [Clostridium kluyveri DSM 555] gi|219853532|ref|YP_002470654.1| hypothetical protein CKR_0189 [Clostridium kluyveri NBRC 12016] gi|189044970|sp|A5N4Q3|RS3_CLOK5 RecName: Full=30S ribosomal protein S3 gi|254764524|sp|B9DYB5|RS3_CLOK1 RecName: Full=30S ribosomal protein S3 gi|146345748|gb|EDK32284.1| RpsC [Clostridium kluyveri DSM 555] gi|219567256|dbj|BAH05240.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 223 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 94/223 (42%), Positives = 143/223 (64%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ W+++W+A + L ED KIR++++ AG++KI IER Sbjct: 1 MGQKVHPHGLRVGIIKEWDAKWYADKKNFADNLVEDNKIRKFVKKKGAIAGISKIQIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 K ++ +++A+PG+IIGK G IE ++ +L + + I +++ EV E +A L+A++ Sbjct: 61 AKRIKLNIFTAKPGMIIGKGGQGIEALKTELKKIVPDKVILINIVEVKVAEADAQLMAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++R+E Y EG +PLQTLR Sbjct: 121 IALQLEKRISFRRAMKQTIQRAMKSGIKGVKTTCSGRLGGAEIARSESYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDYG A A+T YG G+KV+V + + E + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPVKKPVENKEEAKA 223 >gi|223038386|ref|ZP_03608680.1| ribosomal protein S3 [Campylobacter rectus RM3267] gi|222880243|gb|EEF15330.1| ribosomal protein S3 [Campylobacter rectus RM3267] Length = 233 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 109/225 (48%), Positives = 152/225 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + ED KIR +L+ L AGV++ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAKGNLAENIGEDYKIRAFLKKKLYYAGVSQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D+EK+++ + + N E+++++ E K + +A L A+++ Sbjct: 61 AKKIRVTVVAARPGIIIGKKGSDVEKLKEDIQKLINKEVNVNIKEERKAQASAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEIARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDYG A A T YG+ GIKV++ + + E + +K Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKNEEEKTDKK 225 >gi|227876209|ref|ZP_03994325.1| possible ribosomal protein S3 [Mobiluncus mulieris ATCC 35243] gi|269976885|ref|ZP_06183859.1| ribosomal protein S3 [Mobiluncus mulieris 28-1] gi|306819485|ref|ZP_07453192.1| 30S ribosomal protein S3 [Mobiluncus mulieris ATCC 35239] gi|307701267|ref|ZP_07638289.1| ribosomal protein S3 [Mobiluncus mulieris FB024-16] gi|227843170|gb|EEJ53363.1| possible ribosomal protein S3 [Mobiluncus mulieris ATCC 35243] gi|269934716|gb|EEZ91276.1| ribosomal protein S3 [Mobiluncus mulieris 28-1] gi|304647777|gb|EFM45095.1| 30S ribosomal protein S3 [Mobiluncus mulieris ATCC 35239] gi|307613661|gb|EFN92908.1| ribosomal protein S3 [Mobiluncus mulieris FB024-16] Length = 274 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWFA G Y + ED++IR ++ L++AG++K+ Sbjct: 1 MGQKVNPTGFRLGITTEHRSRWFADSTKPGQRYRDFVKEDVEIRRLMEEKLERAGISKVG 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT + +Y+ARPG++IG++G + +++R +L +T ++ L++ EV P+I+A L+ Sbjct: 61 IERTRDRVSVDLYTARPGIVIGRRGAEADRLRAQLEKLTGKQVQLNIREVKNPDIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAM++ +QSA+R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQSIAEQLSARVSFRRAMRKGMQSALRGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA+IDYG A T +G G+KV++ D + + A + Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDTTEREFARMQAEQ 223 >gi|260589273|ref|ZP_05855186.1| ribosomal protein S3 [Blautia hansenii DSM 20583] gi|331082679|ref|ZP_08331802.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540354|gb|EEX20923.1| ribosomal protein S3 [Blautia hansenii DSM 20583] gi|330400298|gb|EGG79940.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA] Length = 218 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A G ++ L ED IR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEG-DFADNLVEDYNIRTYLKKKLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKVELQKFTDKKLVVDIKEVKRPDKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 ALQLENRISFRRAMKSTMSRTMKAGAKGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K ++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKAWIYNGEVLPTK 210 >gi|15645926|ref|NP_208105.1| 30S ribosomal protein S3 [Helicobacter pylori 26695] gi|2500397|sp|P56010|RS3_HELPY RecName: Full=30S ribosomal protein S3 gi|2314475|gb|AAD08352.1| ribosomal protein S3 (rps3) [Helicobacter pylori 26695] Length = 234 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 147/208 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK++ L + E+ +++ EV P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKDGLKTLIKKEVSINIKEVKHPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVCVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|259500898|ref|ZP_05743800.1| 30S ribosomal protein S3 [Lactobacillus iners DSM 13335] gi|302190649|ref|ZP_07266903.1| 30S ribosomal protein S3 [Lactobacillus iners AB-1] gi|309803626|ref|ZP_07697716.1| ribosomal protein S3 [Lactobacillus iners LactinV 11V1-d] gi|309806724|ref|ZP_07700719.1| ribosomal protein S3 [Lactobacillus iners LactinV 03V1-b] gi|309809126|ref|ZP_07702999.1| ribosomal protein S3 [Lactobacillus iners SPIN 2503V10-D] gi|312871201|ref|ZP_07731299.1| ribosomal protein S3 [Lactobacillus iners LEAF 3008A-a] gi|312872777|ref|ZP_07732842.1| ribosomal protein S3 [Lactobacillus iners LEAF 2062A-h1] gi|312874924|ref|ZP_07734943.1| ribosomal protein S3 [Lactobacillus iners LEAF 2053A-b] gi|259167592|gb|EEW52087.1| 30S ribosomal protein S3 [Lactobacillus iners DSM 13335] gi|308164224|gb|EFO66481.1| ribosomal protein S3 [Lactobacillus iners LactinV 11V1-d] gi|308166904|gb|EFO69088.1| ribosomal protein S3 [Lactobacillus iners LactinV 03V1-b] gi|308170571|gb|EFO72591.1| ribosomal protein S3 [Lactobacillus iners SPIN 2503V10-D] gi|311089669|gb|EFQ48094.1| ribosomal protein S3 [Lactobacillus iners LEAF 2053A-b] gi|311091819|gb|EFQ50198.1| ribosomal protein S3 [Lactobacillus iners LEAF 2062A-h1] gi|311093215|gb|EFQ51561.1| ribosomal protein S3 [Lactobacillus iners LEAF 3008A-a] Length = 224 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 94/222 (42%), Positives = 148/222 (66%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+N W ++W+A G +Y L+EDL+IR+Y++ L A ++ + IER Sbjct: 1 MGQKINPNGFRLGINRDWEAKWYA-GKDYANNLNEDLRIRKYIEQKLADASISNVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +S+ Sbjct: 60 ANRINLSIHTAKPGMVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 AKQLEARIAFRRATRKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T YG G+KV+++ E+ P A + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPVASKKA 220 >gi|223936422|ref|ZP_03628334.1| ribosomal protein S3 [bacterium Ellin514] gi|223894940|gb|EEF61389.1| ribosomal protein S3 [bacterium Ellin514] Length = 228 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 109/211 (51%), Positives = 151/211 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI R+ VN W S+W+A E+G LL ED +IR+ L+ L+ A V +ILIER Sbjct: 1 MGQKSNPIGLRIAVNREWRSKWYAGKKEFGKLLTEDRQIRDLLKKKLESASVPRILIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 CRI + +ARPG++IG+KG +I+K++++LS MT EI++ + E+ PE++A L+A++I Sbjct: 61 ATRCRITILTARPGVVIGRKGAEIDKLKEELSKMTGKEIYVDIMEIKTPELDAQLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+A+Q+ FGA+G+K+ +GRL GAEL+R E Y GRVPL TLRA Sbjct: 121 ALQLERRVSFRRAMKKALQTTKDFGAEGIKLRCAGRLGGAELARVEQYHWGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K ++ + SD Sbjct: 181 DIDYGFAEAKTMYGKLGVKCWICKGETKSDR 211 >gi|116628969|ref|YP_814141.1| 30S ribosomal protein S3 [Lactobacillus gasseri ATCC 33323] gi|282852655|ref|ZP_06261997.1| ribosomal protein S3 [Lactobacillus gasseri 224-1] gi|311111232|ref|ZP_07712629.1| ribosomal protein S3 [Lactobacillus gasseri MV-22] gi|122274033|sp|Q046B9|RS3_LACGA RecName: Full=30S ribosomal protein S3 gi|116094551|gb|ABJ59703.1| SSU ribosomal protein S3P [Lactobacillus gasseri ATCC 33323] gi|282556397|gb|EFB62017.1| ribosomal protein S3 [Lactobacillus gasseri 224-1] gi|311066386|gb|EFQ46726.1| ribosomal protein S3 [Lactobacillus gasseri MV-22] Length = 222 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G ++E +RK+LS +T +H+++ E+ KP+++A L+ + I Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTKKNVHINIVEIKKPDLDAKLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T YG G+KV+++ E+ P+ + + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKTK 219 >gi|260102361|ref|ZP_05752598.1| 30S ribosomal protein S3 [Lactobacillus helveticus DSM 20075] gi|260083805|gb|EEW67925.1| 30S ribosomal protein S3 [Lactobacillus helveticus DSM 20075] gi|328463370|gb|EGF35043.1| 30S ribosomal protein S3 [Lactobacillus helveticus MTCC 5463] Length = 224 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 153/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVRVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|317485816|ref|ZP_07944680.1| ribosomal protein S3 [Bilophila wadsworthia 3_1_6] gi|316922922|gb|EFV44144.1| ribosomal protein S3 [Bilophila wadsworthia 3_1_6] Length = 213 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 109/208 (52%), Positives = 149/208 (71%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRWF+ +Y A ++ED ++R+Y++ L AG++KI IER Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKDYPAFVYEDHEVRKYVKKLLYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE+++ L+A++I Sbjct: 60 GGKIRLILSTARPGIVIGRKGVEIEKLRNDLRAKFGREFSLEVNEIRRPEVDSQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR V A +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA Sbjct: 120 AQQLERRVAFRRAMKRTVTMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+K ++ + + Sbjct: 180 DIDYGFAEARTTYGIIGVKAWIYKGEIL 207 >gi|27468736|ref|NP_765373.1| 30S ribosomal protein S3 [Staphylococcus epidermidis ATCC 12228] gi|57867711|ref|YP_189388.1| 30S ribosomal protein S3 [Staphylococcus epidermidis RP62A] gi|242243953|ref|ZP_04798396.1| 30S ribosomal protein S3 [Staphylococcus epidermidis W23144] gi|251812053|ref|ZP_04826526.1| 30S ribosomal protein S3 [Staphylococcus epidermidis BCM-HMP0060] gi|282875348|ref|ZP_06284221.1| ribosomal protein S3 [Staphylococcus epidermidis SK135] gi|293368439|ref|ZP_06615063.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W2(grey)] gi|29427432|sp|Q8CRG6|RS3_STAES RecName: Full=30S ribosomal protein S3 gi|62287186|sp|Q5HM05|RS3_STAEQ RecName: Full=30S ribosomal protein S3 gi|27316284|gb|AAO05459.1|AE016750_64 30S ribosomal protein S3 [Staphylococcus epidermidis ATCC 12228] gi|57638369|gb|AAW55157.1| ribosomal protein S3 [Staphylococcus epidermidis RP62A] gi|242232586|gb|EES34898.1| 30S ribosomal protein S3 [Staphylococcus epidermidis W23144] gi|251804387|gb|EES57044.1| 30S ribosomal protein S3 [Staphylococcus epidermidis BCM-HMP0060] gi|281296113|gb|EFA88634.1| ribosomal protein S3 [Staphylococcus epidermidis SK135] gi|291317397|gb|EFE57819.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W2(grey)] gi|319400618|gb|EFV88843.1| ribosomal protein S3 [Staphylococcus epidermidis FRI909] gi|329731251|gb|EGG67621.1| ribosomal protein S3 [Staphylococcus epidermidis VCU144] gi|329736485|gb|EGG72753.1| ribosomal protein S3 [Staphylococcus epidermidis VCU028] gi|329737085|gb|EGG73340.1| ribosomal protein S3 [Staphylococcus epidermidis VCU045] Length = 217 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNTLTDKKVHINVIEIKKIDIDARLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA Sbjct: 120 ARQLENRASFRRVQKQAITRAMKNGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A A+T YG G+KV++ + + +++ Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213 >gi|148273795|ref|YP_001223356.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|170780739|ref|YP_001709071.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp. sepedonicus] gi|189044966|sp|A5CUA7|RS3_CLAM3 RecName: Full=30S ribosomal protein S3 gi|189044967|sp|B0RB45|RS3_CLAMS RecName: Full=30S ribosomal protein S3 gi|147831725|emb|CAN02694.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|169155307|emb|CAQ00410.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp. sepedonicus] Length = 265 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ SRWF+ G Y + ED++IR L+ L +AGVA+I Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKKGQRYSDYVAEDVRIRTMLKTSLDRAGVARIE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +Y+ARPG++IG++G + E+IR L +T +I L++ EV PE A L+ Sbjct: 61 IERTRDRVRVDIYTARPGIVIGRRGVEAERIRADLEKLTGKQIQLNILEVKNPEAEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +Q A R GA GV++ SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLAGRVAFRRAMRKGLQGAQRAGAKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A T++G G+KV+V D +++ D A + + Sbjct: 181 TLRANIDYGFYEARTSFGRIGVKVWVYKGD-ITNKDLAREQANQKSSRPE 229 >gi|109946765|ref|YP_663993.1| 30S ribosomal protein S3 [Helicobacter acinonychis str. Sheeba] gi|123362793|sp|Q17ZD2|RS3_HELAH RecName: Full=30S ribosomal protein S3 gi|109713986|emb|CAJ98994.1| 30S ribosomal protein S3 [Helicobacter acinonychis str. Sheeba] Length = 234 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSQIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA GVKV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGVKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|317181035|dbj|BAJ58821.1| 30S ribosomal protein S3 [Helicobacter pylori F32] Length = 234 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 105/208 (50%), Positives = 148/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++++IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEVVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV P+ ++ L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKCPQADSQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|323465830|gb|ADX69517.1| 30S ribosomal protein S3 [Lactobacillus helveticus H10] Length = 224 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+K SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKAQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224 >gi|94968260|ref|YP_590308.1| SSU ribosomal protein S3P [Candidatus Koribacter versatilis Ellin345] gi|123256699|sp|Q1ISB6|RS3_ACIBL RecName: Full=30S ribosomal protein S3 gi|94550310|gb|ABF40234.1| SSU ribosomal protein S3P [Candidatus Koribacter versatilis Ellin345] Length = 223 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 109/218 (50%), Positives = 151/218 (69%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG W SRWF +Y LL ED+K++ L+ LK AGV+ I +ER Sbjct: 1 MGQKVHPYGFRLGYTKPWKSRWFIE-RDYDKLLLEDVKLKAELKEKLKSAGVSSIEVERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RII+ +ARPG+IIG+KG +I+K++ +L TN E+++ + EV KPE++A L+A+SI Sbjct: 60 GNKLRIIIRTARPGIIIGRKGAEIDKLKGELQKRTNREVYIDIQEVHKPELDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA Sbjct: 120 ALQLEKRVGFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+K +V + + + P Sbjct: 180 DIDYGFAEARTTYGVIGVKAWVYKGEILPAAKKREPQV 217 >gi|161506879|ref|YP_001576833.1| 30S ribosomal protein S3 [Lactobacillus helveticus DPC 4571] gi|172048373|sp|A8YXL1|RS3_LACH4 RecName: Full=30S ribosomal protein S3 gi|160347868|gb|ABX26542.1| 30S ribosomal protein S3 [Lactobacillus helveticus DPC 4571] Length = 224 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 154/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK+L+ +T+ ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTDKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G++V+++ + + + + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPTKGGNR 224 >gi|94985961|ref|YP_605325.1| 30S ribosomal protein S3 [Deinococcus geothermalis DSM 11300] gi|122986551|sp|Q1IX78|RS3_DEIGD RecName: Full=30S ribosomal protein S3 gi|94556242|gb|ABF46156.1| ribosomal protein S3 [Deinococcus geothermalis DSM 11300] Length = 248 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLG+ WNSRW+A +Y LL ED KIR+ + L AG+A+I IER Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKQYSQLLKEDEKIRKLVSQKLAAAGIARIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +I+ +A+PG++IGK G I+++R ++ + + + ++V E+P P I+A L+A Sbjct: 61 GQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+ERR FRRAMK+A Q M GA GVKVI SGRL GAE +RTE LEGRVPL TLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYGTA AET YGS GIKV V + + T+ + E+ Sbjct: 181 ADIDYGTARAETTYGSLGIKVLVFNGEVIGGKTETLARPPRKSDER 226 >gi|325479134|gb|EGC82231.1| ribosomal protein S3 [Anaerococcus prevotii ACS-065-V-Col13] Length = 238 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 96/222 (43%), Positives = 145/222 (65%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG+A I IER Sbjct: 1 MGQKVNPKGFRVGVIKDWDSKWFADKKDFSDLLVEDYNIRKIVKKEVYDAGIADIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 N ++ V++ +PG++IGK G +E+++KKL I ++V E+ +++A L+A++ Sbjct: 61 VNNLKVTVFAGKPGMVIGKGGAGVEELKKKLEKAAPGKRIIINVEEIKYQDLSAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR Sbjct: 121 IASQLENRVAFRRAMKQSMQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A+IDYG A A+T YG G KV++ + + + + Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222 >gi|123969291|ref|YP_001010149.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. AS9601] gi|126697081|ref|YP_001091967.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9301] gi|152060891|sp|A3PF41|RS3_PROM0 RecName: Full=30S ribosomal protein S3 gi|152060895|sp|A2BTD1|RS3_PROMS RecName: Full=30S ribosomal protein S3 gi|123199401|gb|ABM71042.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. AS9601] gi|126544124|gb|ABO18366.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9301] Length = 243 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 140/230 (60%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIQKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T A T YG GIKV+V + + + TIP A+ R + Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGASPKRKASR 230 >gi|309804976|ref|ZP_07699034.1| ribosomal protein S3 [Lactobacillus iners LactinV 09V1-c] gi|312874103|ref|ZP_07734138.1| ribosomal protein S3 [Lactobacillus iners LEAF 2052A-d] gi|315654020|ref|ZP_07906936.1| 30S ribosomal protein S3 [Lactobacillus iners ATCC 55195] gi|325912336|ref|ZP_08174732.1| ribosomal protein S3 [Lactobacillus iners UPII 143-D] gi|325913232|ref|ZP_08175601.1| ribosomal protein S3 [Lactobacillus iners UPII 60-B] gi|329920649|ref|ZP_08277336.1| ribosomal protein S3 [Lactobacillus iners SPIN 1401G] gi|308165736|gb|EFO67961.1| ribosomal protein S3 [Lactobacillus iners LactinV 09V1-c] gi|311090443|gb|EFQ48852.1| ribosomal protein S3 [Lactobacillus iners LEAF 2052A-d] gi|315488716|gb|EFU78362.1| 30S ribosomal protein S3 [Lactobacillus iners ATCC 55195] gi|325475807|gb|EGC78977.1| ribosomal protein S3 [Lactobacillus iners UPII 143-D] gi|325477496|gb|EGC80639.1| ribosomal protein S3 [Lactobacillus iners UPII 60-B] gi|328935907|gb|EGG32367.1| ribosomal protein S3 [Lactobacillus iners SPIN 1401G] Length = 224 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 95/222 (42%), Positives = 148/222 (66%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+N W ++W+A G +Y L+EDL+IR+Y++ L A ++ + IER Sbjct: 1 MGQKINPNGFRLGINRDWEAKWYA-GKDYANNLNEDLRIRKYIEQKLADASISNVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +SI Sbjct: 60 ANRINLSIHTAKPGMVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 AKQLEARIAFRRATRKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T YG G+KV+++ E+ P A + Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPVASKKA 220 >gi|225175668|ref|ZP_03729662.1| ribosomal protein S3 [Dethiobacter alkaliphilus AHT 1] gi|225168997|gb|EEG77797.1| ribosomal protein S3 [Dethiobacter alkaliphilus AHT 1] Length = 226 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 155/227 (68%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+GV W ++W+A Y LLHED+KIR+ + HL AGV+K+ IER Sbjct: 1 MGQKVSPVGFRIGVIRDWEAKWYAD-KNYTDLLHEDMKIRKAIVKHLNNAGVSKVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 RI +++A+PG++IGK G+ +E++RKKL + ++H+++ E+ +PE++ATL+A+S Sbjct: 60 ANRIRISIHTAKPGIVIGKGGSGVEELRKKLEKLTDKKQVHINIVEIKRPELDATLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QL +R+ FRRAMK+++ MR GA G+KV+ SGRL GAE++RTE EG VPLQTLR Sbjct: 120 IANQLTKRIAFRRAMKQSIFRTMRAGAKGIKVMISGRLGGAEIARTESNHEGTVPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDYG A+T YG G+KV++ + + ++ +K Sbjct: 180 ADIDYGFVEADTTYGKIGVKVWIYKGEVLPTKQKQEGGNQNADTKKS 226 >gi|15612298|ref|NP_223951.1| 30S ribosomal protein S3 [Helicobacter pylori J99] gi|7388209|sp|Q9ZJR9|RS3_HELPJ RecName: Full=30S ribosomal protein S3 gi|4155825|gb|AAD06799.1| 30S RIBOSOMAL PROTEIN S3 [Helicobacter pylori J99] gi|297380494|gb|ADI35381.1| ribosomal protein S3 [Helicobacter pylori v225d] gi|308064090|gb|ADO05977.1| 30S ribosomal protein S3 [Helicobacter pylori Sat464] gi|317009996|gb|ADU80576.1| 30S ribosomal protein S3 [Helicobacter pylori India7] Length = 234 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|261838632|gb|ACX98398.1| ribosomal protein S3 [Helicobacter pylori 51] Length = 234 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ ++ L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADSQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|302877807|ref|YP_003846371.1| 30S ribosomal protein S3 [Gallionella capsiferriformans ES-2] gi|302580596|gb|ADL54607.1| ribosomal protein S3 [Gallionella capsiferriformans ES-2] Length = 235 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 160/226 (70%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL V W+S+WFA + + +L +D+++R YL+ L A V+KI+IER Sbjct: 1 MGQKIHPTGFRLSVRKNWDSKWFANSANFADMLLKDIEVRAYLKKKLASAMVSKIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K+ ++ +Y+ARPG++IGKKG DIE +R +L + L++ EV KPEI+A LIA + Sbjct: 61 AKSAKVTIYTARPGMVIGKKGEDIEVLRAELRRRMGLQSVDLAIEEVRKPEIDAQLIADN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 I QLE+R++FRRAMKR++Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLR Sbjct: 121 ITAQLEKRIMFRRAMKRSMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYGT+ A+T YG G+KV+V D + + A + V+K Sbjct: 181 ADIDYGTSEAQTTYGIIGVKVWVYKGDIGQEVAAPAAAEPEKRVKK 226 >gi|294101634|ref|YP_003553492.1| ribosomal protein S3 [Aminobacterium colombiense DSM 12261] gi|293616614|gb|ADE56768.1| ribosomal protein S3 [Aminobacterium colombiense DSM 12261] Length = 221 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 94/222 (42%), Positives = 149/222 (67%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ +RLGV W S+W+A G +Y LHEDLK+R+++ AG++++ IER Sbjct: 1 MGQKVHPVGYRLGVVTEWESKWYANGKDYAKKLHEDLKLRKWIMDRWAHAGISRVDIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R ++++RPG++IG+ G++I+ ++ +L T S+I ++V E+ P++ A L+++S+ Sbjct: 61 GNVIRFSIWTSRPGVVIGRGGSEIQVVKDELQKQTGSKIMINVQEIKNPDLVAQLVSESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + LERRV FRRAMK+A+ AM+ GA G+KV +GRL GAE++RTE Y EG++PL T+RA Sbjct: 121 SSALERRVSFRRAMKQAIFRAMKAGAKGIKVQCAGRLGGAEIARTEWYNEGQLPLSTIRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYG A+T YG G+KV++ E + P + Sbjct: 181 DIDYGFYEAKTMYGIIGVKVWIFRDKE--NERPAQPRPSRKR 220 >gi|308272973|emb|CBX29577.1| 30S ribosomal protein S3 [uncultured Desulfobacterium sp.] Length = 217 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 112/215 (52%), Positives = 151/215 (70%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ TW SRW+A G Y + ED IR++L+ L AG+++I IER+ Sbjct: 1 MGQKVNPIGLRLGIIKTWESRWYA-GKNYAEYILEDSNIRKFLKKKLNSAGISRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y++RPG+IIGKKG++I +++++L + E+ + + EV KPEI+A LIA+S+ Sbjct: 60 SKRVRLRIYASRPGIIIGKKGSEILQLKQELEKQISHEVLIDIQEVRKPEIDAQLIAESV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QQ+ +RV FRRAMKR V SAMRFGA GVK+I SGRL GAE++R E Y EGRVPL TLRA Sbjct: 120 SQQIIKRVAFRRAMKRGVASAMRFGAMGVKIICSGRLGGAEMARREWYREGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 IDYG A T YG GIKV+V + + Sbjct: 180 DIDYGFTEALTTYGIIGIKVFVFKGEILRKDQIEA 214 >gi|34558021|ref|NP_907836.1| 30S ribosomal protein S3 [Wolinella succinogenes DSM 1740] gi|61215661|sp|Q7M8E0|RS3_WOLSU RecName: Full=30S ribosomal protein S3 gi|34483739|emb|CAE10736.1| 30S RIBOSOMAL PROTEIN S3 [Wolinella succinogenes] Length = 236 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 112/226 (49%), Positives = 152/226 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + ED KIR++L+ L AGV++I+IERT Sbjct: 1 MGQKVNPIGLRLGINRNWASRWFPNYQTAPLNISEDHKIRKFLKKELYYAGVSEIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG DIEK+++ L + + EI +++ EV +P+ NA L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGADIEKLKEALKKIVDKEISINIKEVKRPQANAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERRV FRRAMK+ +Q+AM+ GA G+K+ SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 TMQLERRVAFRRAMKKVMQAAMKAGAKGIKIKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G KV++ + + E +K+ Sbjct: 181 KIDYGFAEAMTTYGIIGAKVWIFKGEVLQKGIQPEKKEEAPARDKE 226 >gi|157164217|ref|YP_001467714.1| 30S ribosomal protein S3 [Campylobacter concisus 13826] gi|171855078|sp|A7ZG06|RS3_CAMC1 RecName: Full=30S ribosomal protein S3 gi|157101407|gb|EAT98159.2| ribosomal protein S3 [Campylobacter concisus 13826] Length = 232 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 106/224 (47%), Positives = 148/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + ED KIR +L+ L AG+++ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKQSLPENIGEDYKIRAFLKKKLYYAGISQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG D+E ++ ++S + E+++++ E K + +A L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGQDVENLKNEVSKLIGKEVNVNIKEERKAQASAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A T YG+ GIKV++ + + E + Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEEEAPKK 224 >gi|113955322|ref|YP_729661.1| 30S ribosomal protein S3 [Synechococcus sp. CC9311] gi|123132723|sp|Q0ID11|RS3_SYNS3 RecName: Full=30S ribosomal protein S3 gi|113882673|gb|ABI47631.1| ribosomal protein S3 [Synechococcus sp. CC9311] Length = 243 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTVGDSSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVV 223 LRA IDY T VA T YG GIKV+V + +SD + A R Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLSDDSQQQIPVGANPRRRA 229 >gi|15605622|ref|NP_212995.1| ribosomal protein S03 [Aquifex aeolicus VF5] gi|6647794|sp|O66437|RS3_AQUAE RecName: Full=30S ribosomal protein S3 gi|2982772|gb|AAC06398.1| ribosomal protein S03 [Aquifex aeolicus VF5] Length = 212 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 108/212 (50%), Positives = 146/212 (68%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLGV W S+W+A EY LLHEDLKI+ Y++ K AGV+K+ IER Sbjct: 1 MGQKTHPIGFRLGVIKEWPSKWYAPKKEYSKLLHEDLKIKNYIKERYKVAGVSKVEIERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 R+ +++ARP ++IG++G ++E ++K L M EI +SV EV PE++A L+AQ Sbjct: 61 VDKVRVKIHTARPAIVIGRRGQEVENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQD 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A++ GA GVKV GR+ GAEL+R E +L GR+PLQTLR Sbjct: 121 IATQIERRVSHRRAMKRAIDNALKAGAKGVKVQVKGRIGGAELARKEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDYG A A T YG +KV++ D ++ Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDVLNGR 212 >gi|315587202|gb|ADU41583.1| 30S ribosomal protein S3 [Helicobacter pylori 35A] Length = 234 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV P+ ++ L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKHPQADSQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++FGA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKFGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|148243221|ref|YP_001228378.1| 30S ribosomal protein S3 [Synechococcus sp. RCC307] gi|189045341|sp|A5GVW6|RS3_SYNR3 RecName: Full=30S ribosomal protein S3 gi|147851531|emb|CAK29025.1| 30S ribosomal protein S3 [Synechococcus sp. RCC307] Length = 242 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 94/220 (42%), Positives = 134/220 (60%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYAPARTYPTLLQEDERIRKFVNKKYASAGISSVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRAGIQKTLGDKSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRVIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY T VA T YG GIKV+V + + P Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLPGQKQQPPV 220 >gi|313680509|ref|YP_004058248.1| SSU ribosomal protein s3p [Oceanithermus profundus DSM 14977] gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977] Length = 247 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 142/226 (62%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLG+ W SRW++ Y LL ED K+RE ++ + G+A+I IER Sbjct: 1 MGNKINPIGFRLGITRDWESRWYSGKKGYAQLLEEDRKVRELIENEVAHGGIARIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 N + V++A+PG+IIG+ G I+++R +L M N I L+V EV P ++A L+AQ Sbjct: 61 ADNLSVTVHAAKPGVIIGRGGETIKRMRAELQKMFPNRTIALNVQEVGNPNLSAPLVAQR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+Q+ERR RRA+K+AVQ + GA G KV+ SGR+ GAE +RTE +GRVPL TLR Sbjct: 121 VAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVVSGRIGGAEQARTEWSSDGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A+IDYG A+A T YG G+K Y+ + + AA + Sbjct: 181 ANIDYGFALARTTYGVLGVKAYIFKGEVIGQQKPARKAAAAAGKPE 226 >gi|217032066|ref|ZP_03437566.1| hypothetical protein HPB128_16g26 [Helicobacter pylori B128] gi|298735662|ref|YP_003728187.1| 30S ribosomal protein S3 [Helicobacter pylori B8] gi|216946214|gb|EEC24822.1| hypothetical protein HPB128_16g26 [Helicobacter pylori B128] gi|298354851|emb|CBI65723.1| small subunit ribosomal protein S3 [Helicobacter pylori B8] Length = 234 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKALIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|116495941|ref|YP_807675.1| ribosomal protein S3 [Lactobacillus casei ATCC 334] gi|191639422|ref|YP_001988588.1| 30S ribosomal protein S3 [Lactobacillus casei BL23] gi|239630345|ref|ZP_04673376.1| 30S ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067497|ref|YP_003789520.1| 30S ribosomal protein L3 [Lactobacillus casei str. Zhang] gi|122262659|sp|Q034Y9|RS3_LACC3 RecName: Full=30S ribosomal protein S3 gi|116106091|gb|ABJ71233.1| SSU ribosomal protein S3P [Lactobacillus casei ATCC 334] gi|190713724|emb|CAQ67730.1| 30S ribosomal protein S3 [Lactobacillus casei BL23] gi|239527957|gb|EEQ66958.1| 30S ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439904|gb|ADK19670.1| Ribosomal protein S3 [Lactobacillus casei str. Zhang] Length = 220 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 152/214 (71%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A T YG GIK +++ + + + Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213 >gi|317178396|dbj|BAJ56184.1| 30S ribosomal protein S3 [Helicobacter pylori F30] Length = 234 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|323700812|ref|ZP_08112724.1| ribosomal protein S3 [Desulfovibrio sp. ND132] gi|323460744|gb|EGB16609.1| ribosomal protein S3 [Desulfovibrio desulfuricans ND132] Length = 213 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 153/208 (73%), Gaps = 1/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG N W SRW++R +Y A + +D ++R++++ L QAGV++I IER Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWYSR-KDYPAFVFQDDQVRKFVKKKLFQAGVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+++ARPG++IG+KG +IEK+R++L + +E + VNE+ +PE+ A L+A+SI Sbjct: 60 GGKIRLIIHTARPGIVIGRKGVEIEKLREELRSKFQTEFTIEVNEIRRPEVEAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR+ FRRAMKR V A +FGA+G+KV +GRL GAE++R E Y +GRVPL TLRA Sbjct: 120 AQQLERRIAFRRAMKRTVGLARKFGAEGIKVACAGRLAGAEIARGEWYRDGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 180 DIDYGFAEASTTYGVIGVKVWIFKGEIL 207 >gi|227533966|ref|ZP_03964015.1| ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188343|gb|EEI68410.1| ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 220 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 152/214 (71%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP++++ L+ ++I Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDSKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY A T YG GIK +++ + + + Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213 >gi|307637984|gb|ADN80434.1| SSU ribosomal protein S3p:S3e [Helicobacter pylori 908] Length = 234 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|108563683|ref|YP_627999.1| 30S ribosomal protein S3 [Helicobacter pylori HPAG1] gi|188528101|ref|YP_001910788.1| 30S ribosomal protein S3 [Helicobacter pylori Shi470] gi|208435210|ref|YP_002266876.1| ribosomal protein S3 [Helicobacter pylori G27] gi|217033630|ref|ZP_03439058.1| hypothetical protein HP9810_899g66 [Helicobacter pylori 98-10] gi|254779855|ref|YP_003057961.1| 30S ribosomal protein S3 [Helicobacter pylori B38] gi|308183423|ref|YP_003927550.1| 30S ribosomal protein S3 [Helicobacter pylori PeCan4] gi|308185065|ref|YP_003929198.1| 30S ribosomal protein S3 [Helicobacter pylori SJM180] gi|123073728|sp|Q1CRU7|RS3_HELPH RecName: Full=30S ribosomal protein S3 gi|226697719|sp|B5Z8W1|RS3_HELPG RecName: Full=30S ribosomal protein S3 gi|226697720|sp|B2UV76|RS3_HELPS RecName: Full=30S ribosomal protein S3 gi|107837456|gb|ABF85325.1| ribosomal protein S3 [Helicobacter pylori HPAG1] gi|188144341|gb|ACD48758.1| 30S ribosomal protein S3 [Helicobacter pylori Shi470] gi|208433139|gb|ACI28010.1| ribosomal protein S3 [Helicobacter pylori G27] gi|216943976|gb|EEC23410.1| hypothetical protein HP9810_899g66 [Helicobacter pylori 98-10] gi|254001767|emb|CAX29998.1| 30S ribosomal subunit protein S3 [Helicobacter pylori B38] gi|261840028|gb|ACX99793.1| 30S ribosomal protein S3 [Helicobacter pylori 52] gi|308060985|gb|ADO02881.1| 30S ribosomal protein S3 [Helicobacter pylori SJM180] gi|308062598|gb|ADO04486.1| 30S ribosomal protein S3 [Helicobacter pylori Cuz20] gi|308065608|gb|ADO07500.1| 30S ribosomal protein S3 [Helicobacter pylori PeCan4] gi|317011513|gb|ADU85260.1| 30S ribosomal protein S3 [Helicobacter pylori SouthAfrica7] gi|317013100|gb|ADU83708.1| 30S ribosomal protein S3 [Helicobacter pylori Lithuania75] gi|325996589|gb|ADZ51994.1| 30S ribosomal protein S3 [Helicobacter pylori 2018] gi|325998179|gb|ADZ50387.1| 30S ribosomal protein S3 [Helicobacter pylori 2017] Length = 234 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|227501140|ref|ZP_03931189.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098] gi|227216725|gb|EEI82126.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098] Length = 239 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 98/222 (44%), Positives = 146/222 (65%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG+A I IER Sbjct: 1 MGQKVNPKGFRVGVIRDWDSKWFADKKDFSELLVEDYNIRKIVKKEVYDAGIADIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 N +I +++A+PG++IGK G +E+++KKL + I ++V E+ ++ A L+A+S Sbjct: 61 VNNLKITIFAAKPGMVIGKGGAGVEELKKKLEKAAPSKRIIINVEEIKYQDLAAQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR Sbjct: 121 IASQLENRVAFRRAMKQSIQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A+IDYG A A+T YG G KV++ + + + + Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222 >gi|254526486|ref|ZP_05138538.1| ribosomal protein S3 [Prochlorococcus marinus str. MIT 9202] gi|221537910|gb|EEE40363.1| ribosomal protein S3 [Prochlorococcus marinus str. MIT 9202] Length = 243 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 95/231 (41%), Positives = 139/231 (60%), Gaps = 6/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+WFA Y LL ED KIR +++ AG++ +LI R Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIEKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA---AEHRVVEK 225 LRA IDY T A T YG GIKV+V + + + TIP + + + Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGANPKRKASRR 231 >gi|317182559|dbj|BAJ60343.1| 30S ribosomal protein S3 [Helicobacter pylori F57] Length = 234 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ ++ L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADSQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|149195492|ref|ZP_01872570.1| 30S ribosomal protein S3 [Caminibacter mediatlanticus TB-2] gi|149134374|gb|EDM22872.1| 30S ribosomal protein S3 [Caminibacter mediatlanticus TB-2] Length = 238 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 105/226 (46%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+N W SRWF + + D ++R++L+ L AG++ I+IERT Sbjct: 1 MGQKTNPIGLRLGINKNWRSRWFINYNTMPENVLNDYELRKFLKKKLYYAGISDIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K RI +++A+PG+IIGK G+++E ++K+L + E+ L++ E KP+I+A L A++ Sbjct: 61 AKKVRITIFAAKPGIIIGKGGSEVEALKKELQKLVGDKELILNIKEERKPQISAQLAAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A Q+ERRV FRRAMK+ +Q+A++ GA G+KV SGRLNGAE++RTE YLEGRVPL TLR Sbjct: 121 VATQIERRVAFRRAMKKVIQNALKNGAKGIKVQVSGRLNGAEMARTEWYLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYG A A T YG G+KV++ + + ++E + + Sbjct: 181 AKIDYGFAEALTTYGIIGVKVWIFKGEVLQKKGQVESSSEAKPQRR 226 >gi|81429371|ref|YP_396372.1| 30S ribosomal protein S3 [Lactobacillus sakei subsp. sakei 23K] gi|91207818|sp|Q38UR8|RS3_LACSS RecName: Full=30S ribosomal protein S3 gi|78611014|emb|CAI56066.1| 30S ribosomal protein S3 [Lactobacillus sakei subsp. sakei 23K] Length = 219 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 143/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A ++ LHEDLKIR+Y+ L A V+ I IER Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAE-KDFATFLHEDLKIRKYINTKLADASVSTIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++A+PG++IGK G+++E +RK L+N+T ++H+++ E+ KP+++A L+ + I Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVENLRKALNNLTGKKVHINIVEIKKPDLDAHLVGEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA ++A+Q MR GA G+K +GRLNGA++SR E + +G VPL TLRA Sbjct: 120 ARQLEARVAFRRAQRQAMQRTMRAGAKGIKTQVAGRLNGADMSRIETHAQGTVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDY A T YG G+K ++ + + Sbjct: 180 DIDYSWDEAMTTYGKLGVKTWIYRGEVLPAK 210 >gi|16329935|ref|NP_440663.1| 30S ribosomal protein S3 [Synechocystis sp. PCC 6803] gi|2500398|sp|P73314|RS3_SYNY3 RecName: Full=30S ribosomal protein S3 gi|1652421|dbj|BAA17343.1| 30S ribosomal protein S3 [Synechocystis sp. PCC 6803] Length = 240 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 99/228 (43%), Positives = 144/228 (63%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ S W+A Y LL ED KIR+Y++ L AG++ I IER Sbjct: 1 MGQKIHPVGFRLGITKDHKSCWYADPKRYPELLQEDHKIRQYIEKTLNNAGISDIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 + + +++ARPG+++G+ G+ IE++R+ L + +I ++V EVP + +A L+A+ Sbjct: 61 AEQIELGIHTARPGVVVGRGGSGIEQLREGLQKLLGSARQIRVNVIEVPNADADAALMAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIGQQLERRVSFRRVVRQALQRAERAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA IDY A T YG GIKV++ + + ++ I A + K Sbjct: 181 RADIDYAYRTALTTYGILGIKVWIFKGEVIPGQEAAIVAPPSQPRRKS 228 >gi|257458702|ref|ZP_05623826.1| ribosomal protein S3 [Campylobacter gracilis RM3268] gi|257443891|gb|EEV19010.1| ribosomal protein S3 [Campylobacter gracilis RM3268] Length = 231 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 5/229 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AG+++ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSKATLSESIGEDYKIRKFLKAKLYYAGISQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ + +ARPG+IIGKKG ++E +R ++ + N +I +++ E K NA L A+++ Sbjct: 61 AKKIRVTIVAARPGIIIGKKGGEVENLRSEVVKLVNKDIAINIKEERKVGSNALLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKICVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVE 224 IDYG A A T YG+ GIKV++ + + ++ P R Sbjct: 181 RIDYGFAEAHTTYGNIGIKVWIFKGEILQKGIQAEKTDDAPKKTRRPRR 229 >gi|312880366|ref|ZP_07740166.1| SSU ribosomal protein S3P [Aminomonas paucivorans DSM 12260] gi|310783657|gb|EFQ24055.1| SSU ribosomal protein S3P [Aminomonas paucivorans DSM 12260] Length = 223 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 147/220 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ +RLGV W SRW+A Y LHEDL++R++++ AG+++I IER Sbjct: 1 MGQKVHPVGYRLGVIYDWESRWYADKKTYAKNLHEDLRLRQWVKKRWGHAGISRIEIERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R V++ARPG++IGK G +I+ +R++L T + + +++ E+ + +A ++++ + Sbjct: 61 GNVMRFTVWTARPGVVIGKGGAEIQAVREELQKKTGNRVMINIQEMKNADADAQVVSEGV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE YLEG++PL TLRA Sbjct: 121 ASSLERRVSFRRAMKQSIFRAMKAGAKGIKIQCSGRLGGAEIARTEWYLEGQLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 I YG AV+ T YG G+KV++ + + + + A Sbjct: 181 DISYGYAVSRTIYGVIGVKVWIYKGEIIGGAKAQPEAVSR 220 >gi|313112874|ref|ZP_07798520.1| ribosomal protein S3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624779|gb|EFQ08088.1| ribosomal protein S3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 234 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 12/230 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + +Y A+PG++IGK G + ++ KL+ + ++V EV NA Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSAATNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 EG +PLQTLRA IDYG A A T YG G+KV+V + + + + Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKTAQKKE 230 >gi|257440263|ref|ZP_05616018.1| ribosomal protein S3 [Faecalibacterium prausnitzii A2-165] gi|257197297|gb|EEU95581.1| ribosomal protein S3 [Faecalibacterium prausnitzii A2-165] Length = 234 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 12/230 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + +Y A+PG++IGK G + ++ KL+ + ++V EV NA Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSASTNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRSTVPAKGIKAMCSGRLGGADIARTESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 EG +PLQTLRA IDYG A A T YG G+KV+V + + + + Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKTAQKKE 230 >gi|157414157|ref|YP_001485023.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9215] gi|189045028|sp|A8G756|RS3_PROM2 RecName: Full=30S ribosomal protein S3 gi|157388732|gb|ABV51437.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9215] Length = 243 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 95/231 (41%), Positives = 139/231 (60%), Gaps = 6/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+WFA Y LL ED KIR +++ AG++ +LI R Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIEKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA---AEHRVVEK 225 LRA IDY T A T YG GIKV+V + + + TIP + + + Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGANPKRKASRR 231 >gi|269955441|ref|YP_003325230.1| 30S ribosomal protein S3 [Xylanimonas cellulosilytica DSM 15894] gi|269304122|gb|ACZ29672.1| ribosomal protein S3 [Xylanimonas cellulosilytica DSM 15894] Length = 279 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 148/230 (64%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK++P +RLG+ SRWFA G Y + ED++IR+ + L++AG+AK+ Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVEIRKLMATGLERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V +GRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAQRAGAKGIRVQVAGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLRA+IDYG A T +G G+KV++ D + AA + Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGDITEKEFAAQQAASAPRQGRG 230 >gi|257069502|ref|YP_003155757.1| 30S ribosomal protein S3P [Brachybacterium faecium DSM 4810] gi|256560320|gb|ACU86167.1| SSU ribosomal protein S3P [Brachybacterium faecium DSM 4810] Length = 280 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP FRLG+ +SRWFA G Y + ED+ IR + +++AG++K+ Sbjct: 1 MGQKVNPNGFRLGITTEHSSRWFADSSKEGQRYRDYVKEDVAIRSLMSKGMERAGISKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R +L +T +I L++ EV PE +A L+ Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGELEKLTGKQIQLNILEVKNPEADAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR E Y EGRVPL Sbjct: 121 AQGIAEQLAARVSFRRAMRKGMQSAQRAGAKGIRVAVSGRLGGAEMSRNEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+IDYG A TA+G G+KV++ D Sbjct: 181 TLRANIDYGFYEARTAFGRIGVKVWIYKGDV 211 >gi|317178052|dbj|BAJ55841.1| 30S ribosomal protein S3 [Helicobacter pylori F16] Length = 234 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 AIQLEKRVAFRRAMKKVMQAALKSGAKGIKVHVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|225873072|ref|YP_002754531.1| ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196] gi|254764506|sp|C1F636|RS3_ACIC5 RecName: Full=30S ribosomal protein S3 gi|225794492|gb|ACO34582.1| ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196] Length = 223 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 112/218 (51%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLGVN W SRWF +Y LL ED+ ++ L+ LK AGV+ + +ER Sbjct: 1 MGQKVHPYGFRLGVNKPWRSRWFVE-RDYDKLLVEDVHLKRELKEKLKAAGVSSVEVERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG+IIG+KG +IEK++ L TN E+ + + EV KPE++A LIA++I Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIEKLKADLQKRTNREVFIDILEVNKPELDAQLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM++AV SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA Sbjct: 120 ALQLEKRVGFRRAMRKAVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+K +V D AA Sbjct: 180 DIDYGFAEAHTTYGIIGVKTWVYRGDIYQQRRREPQAA 217 >gi|295425646|ref|ZP_06818333.1| 30S ribosomal protein S3 [Lactobacillus amylolyticus DSM 11664] gi|295064662|gb|EFG55583.1| 30S ribosomal protein S3 [Lactobacillus amylolyticus DSM 11664] Length = 223 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 149/220 (67%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLGV W S+W+A Y L+EDL+IR+Y+ LK + V+ + IER Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-RGYKETLNEDLRIRKYISDKLKDSSVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++++PG++IGK G+++E +RK+L+ +T+ ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRINISIHTSKPGMVIGKGGSEVEALRKELNALTSKQVHINIVEIKKPDLDAELVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRAM++A Q MR GA G ++ SGRLNGA+++R E + EGRVPLQTLRA Sbjct: 120 ARQLEARVAFRRAMRQASQRTMRAGAKGTRIQISGRLNGADMARREWHTEGRVPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A T YG G++V+++ + + + Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKSSKPAK 219 >gi|227871796|ref|ZP_03990200.1| ribosomal protein S3 [Oribacterium sinus F0268] gi|227842359|gb|EEJ52585.1| ribosomal protein S3 [Oribacterium sinus F0268] Length = 220 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+S+W+A + L ED KIRE+L+ L A V+KI IER Sbjct: 1 MGQKVNPHGMRVGIIKDWDSKWYADKKNFADNLIEDHKIREFLKKKLYSANVSKIEIERA 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 RIIV++A+PG +IGK G +IEK++K + +TN I + + E+ +P+ +A L+A+S Sbjct: 61 AEDKVRIIVFTAKPGYVIGKGGAEIEKLKKDVQKITNKNIFIDIKEIKRPDRDAQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA LE RV FRRA+K+A+ M+ GA G+K GRL GA+++R E Y EG +PLQTLR Sbjct: 121 IALSLENRVSFRRALKQAMSRTMKAGALGIKASVGGRLGGADIARREFYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A IDYG A A+T YG G+KV++ + + + + + Sbjct: 181 ADIDYGFAEADTTYGKLGVKVWIYKGEVLPAKKNKEGSEK 220 >gi|27904936|ref|NP_778062.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427413|sp|P59447|RS3_BUCBP RecName: Full=30S ribosomal protein S3 gi|27904334|gb|AAO27167.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 235 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WF+ ++ +L D ++R +L+ L +A V++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKHWNSVWFSNSKDFAKILDSDYQVRLFLRKELFKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +YSARPG++IGKKG D+EK+R ++N+T +++ E+ KPE++A L+A +I Sbjct: 61 SKSIRVTIYSARPGIVIGKKGEDVEKLRLSITNITGVPTQINIAEIRKPELDAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QLERR++FRRAMKRAVQ+AMR GA G+KV SGRL G E++R E Y EGRVPL TLRA Sbjct: 121 VSQLERRIMFRRAMKRAVQNAMRQGAKGIKVEISGRLGGTEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 I+Y + A T YG G+KV++ + E+ +IP E + Sbjct: 181 DIEYNVSEAHTTYGVIGVKVWIF-KGEILGGIGSIPKIEKQK 221 >gi|255038095|ref|YP_003088716.1| 30S ribosomal protein S3 [Dyadobacter fermentans DSM 18053] gi|254950851|gb|ACT95551.1| ribosomal protein S3 [Dyadobacter fermentans DSM 18053] Length = 275 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 96/225 (42%), Positives = 155/225 (68%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S W+ G ++ L ED KIR Y++ + + ++K++IERT Sbjct: 1 MGQKVNPIGLRLGIVRGWESSWY-GGKDFSDKLVEDEKIRNYIKARIPKGSISKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G++++KI+++L +T ++ +++ E+ +PEI+A L+ ++I Sbjct: 60 LKRITLTIHTARPGIVIGKGGSEVDKIKEELKKITGKDVQINIYEIKRPEIDAKLVGEAI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL+ R+ +RRAMK+++ SAMR G G+K+ +GRL GAE++RTE Y EGR+PL TLRA Sbjct: 120 AQQLQARISYRRAMKQSIASAMRVGTQGIKIRLAGRLGGAEMARTEEYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY + A+T YG GIKV++ + E+ P+A ++ Sbjct: 180 DIDYAISEAQTIYGKIGIKVWIF-KGELYGKRDLTPSAATAASDR 223 >gi|116072558|ref|ZP_01469824.1| 30S ribosomal protein S3 [Synechococcus sp. BL107] gi|116064445|gb|EAU70205.1| 30S ribosomal protein S3 [Synechococcus sp. BL107] Length = 242 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKTYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRAGIQKTVGDKSRQVRINVVEVERVDGDAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T V +T YG GIKV+V + +S+ T+P A R + Sbjct: 181 LRADIDYATKVGKTTYGVLGIKVWVFKGEVLSEQSQTMPVGANPRRRASR 230 >gi|317014704|gb|ADU82140.1| 30S ribosomal protein S3 [Helicobacter pylori Gambia94/24] Length = 234 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKVLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|320335517|ref|YP_004172228.1| 30S ribosomal protein S3 [Deinococcus maricopensis DSM 21211] gi|319756806|gb|ADV68563.1| ribosomal protein S3 [Deinococcus maricopensis DSM 21211] Length = 247 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 110/229 (48%), Positives = 149/229 (65%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLG+ WNSRW+A Y LL ED +IR ++ LK AG+A+I IER Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKTYSKLLQEDERIRNLVEKELKAAGIARIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +I+ +A+PG++IGK G I+++R ++ + + + ++V E+P P I+A L+A Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKRLRGQIEALVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+Q+ERR FRRAMK+A Q M GA GVKV+ SGRL GAE +RTE LEGRVPL TLR Sbjct: 121 VAEQIERRFAFRRAMKQAAQRVMESGARGVKVVMSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKD 226 A IDYGTA+A T YG GIKV V + + T+ P + R +D Sbjct: 181 ADIDYGTALARTTYGIIGIKVLVFNGEVIGGKTETLARPPRQDRGRRED 229 >gi|207091942|ref|ZP_03239729.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_AG0C1] Length = 234 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 149/208 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSSIDEDNKIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|33862108|ref|NP_893669.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|61215695|sp|Q7UZV2|RS3_PROMP RecName: Full=30S ribosomal protein S3 gi|33634326|emb|CAE20011.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 243 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R Sbjct: 1 MGNKINPTGFRLGITQEHRSKWFATSKTYPTLLQEDDKIRTFIQKKYSSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAYLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ A+Q A R G G+KV GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKVQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA +DY A T YG GIKV+V + + + TIP Sbjct: 181 LRAEVDYALREANTTYGVLGIKVWVFKGEVLPKEEQTIPV 220 >gi|241895181|ref|ZP_04782477.1| 30S ribosomal protein S3 [Weissella paramesenteroides ATCC 33313] gi|241871487|gb|EER75238.1| 30S ribosomal protein S3 [Weissella paramesenteroides ATCC 33313] Length = 222 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 93/222 (41%), Positives = 142/222 (63%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP R+G+ W+++W+A ++ LHEDLK+REY++ L +A V+++ IERT Sbjct: 1 MGHKINPTGMRVGIIRDWDAKWYANKKDFATTLHEDLKLREYIEAKLAEASVSRVEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 I +++A+PG++IGK G++++ +R +L+ + +H+++ E+ KP+++A L+ Sbjct: 61 ANRVNISIHTAKPGMVIGKGGSEVDALRNELAKLVAKGERVHINIIEIKKPDLDAHLVGS 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA L RRV FRRAM+ A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TL Sbjct: 121 QIAADLVRRVAFRRAMRSAIQRAMRAGAKGIKTQVSGRLNGADMARVEQYTEGTVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 RA IDY A T YG G+K ++ D + + S Sbjct: 181 RADIDYSWDEATTTYGQIGVKTWIYRGDILPEKKSVKKQGGE 222 >gi|284042810|ref|YP_003393150.1| ribosomal protein S3 [Conexibacter woesei DSM 14684] gi|283947031|gb|ADB49775.1| ribosomal protein S3 [Conexibacter woesei DSM 14684] Length = 395 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 140/210 (66%), Gaps = 1/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G W S WF+ + L ED IR ++ L AG++ I I + Sbjct: 1 MGQKVHPESLRVGYIHDWKSNWFSE-KNFSDYLVEDEAIRNHIVGRLSHAGLSDITIRKN 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPG++IGK G++++ +R+ L +TN ++ +++ E+ +PE++A L+AQSI Sbjct: 60 ANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQVKVNILEIKRPELDARLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QL+ RV FRRAMKRA+ SAMR GA GVKV SGRL GAE++RTE Y +GRVPL TLRA Sbjct: 120 AEQLQNRVAFRRAMKRALTSAMRSGAKGVKVQVSGRLGGAEMARTEGYSDGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A T +G G+K +++ + + + Sbjct: 180 DIDYGFHEARTTFGRIGVKCWINKGEIMPE 209 >gi|154174323|ref|YP_001409148.1| 30S ribosomal protein S3 [Campylobacter curvus 525.92] gi|171769454|sp|A7H106|RS3_CAMC5 RecName: Full=30S ribosomal protein S3 gi|112802261|gb|EAT99605.1| ribosomal protein S3 [Campylobacter curvus 525.92] Length = 232 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 148/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++ILIERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKASLPENIGEDYKIRAFLKKKLYYAGISQILIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG D+E ++ +S + E+++++ E K + +A L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGQDVENLKNDVSKLIGKEVNVNIKEERKAQASAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 IDYG A A T YG+ GIKV++ + + + + Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEDDAPKK 224 >gi|33864005|ref|NP_895565.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9313] gi|61215701|sp|Q7V537|RS3_PROMM RecName: Full=30S ribosomal protein S3 gi|33635589|emb|CAE21913.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9313] Length = 242 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 97/230 (42%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYATSKMYPILLQEDDRIRRFIHKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R +K + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRTGIQKTIGDHSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T VA T YG GIKV++ + + D T+P A+ R + Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWIFKGEVLGDEAQTMPVGASPRRRGNR 230 >gi|300770245|ref|ZP_07080124.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33861] gi|300762721|gb|EFK59538.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33861] Length = 268 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT Sbjct: 1 MGQKANPIGSRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + V++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ + Sbjct: 60 LKRITVTVHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVAEGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK A+ S MR GA+G+KV+ SGRL GAE++RTE Y EGR PL TLRA Sbjct: 120 AKQLEARISFRRAMKTAIASTMRMGAEGIKVMCSGRLGGAEMARTEQYKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211 >gi|227538712|ref|ZP_03968761.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33300] gi|227241631|gb|EEI91646.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33300] Length = 269 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT Sbjct: 1 MGQKANPIGSRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + V++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ + Sbjct: 60 LKRITVTVHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVAEGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK A+ S MR GA+G+KV+ SGRL GAE++RTE Y EGR PL TLRA Sbjct: 120 AKQLEARISFRRAMKTAIASTMRMGAEGIKVMCSGRLGGAEMARTEQYKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211 >gi|315639315|ref|ZP_07894477.1| 30S ribosomal protein S3 [Campylobacter upsaliensis JV21] gi|315480641|gb|EFU71283.1| 30S ribosomal protein S3 [Campylobacter upsaliensis JV21] Length = 233 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 107/232 (46%), Positives = 155/232 (66%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ ++K+L ++ ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDILKKELQDLIKKDVNINIKEERKAGSSAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + ++ PA + R + Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGFQAEKNEDNAPAKKPRRTRRG 232 >gi|57505350|ref|ZP_00371279.1| ribosomal protein S3 [Campylobacter upsaliensis RM3195] gi|57016486|gb|EAL53271.1| ribosomal protein S3 [Campylobacter upsaliensis RM3195] Length = 233 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 107/232 (46%), Positives = 155/232 (66%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG+D++ ++K+L ++ ++++++ E K +A L A+S+ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDILKKELQDLIKKDVNINIKEERKVGSSAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + ++ PA + R + Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGFQAEKNEDNAPAKKPRRTRRG 232 >gi|78780029|ref|YP_398141.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9312] gi|91207828|sp|Q318J0|RS3_PROM9 RecName: Full=30S ribosomal protein S3 gi|78713528|gb|ABB50705.1| SSU ribosomal protein S3P [Prochlorococcus marinus str. MIT 9312] Length = 243 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 5/228 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIQKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRAGIQKTIGDNTRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I+QQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T Sbjct: 121 EYISQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVV 223 LRA IDY T A T YG GIKV+V + + + TIP A+ R Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEKTIPVGASPKRKA 228 >gi|282857357|ref|ZP_06266594.1| ribosomal protein S3 [Pyramidobacter piscolens W5455] gi|282584857|gb|EFB90188.1| ribosomal protein S3 [Pyramidobacter piscolens W5455] Length = 229 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 92/226 (40%), Positives = 149/226 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI +R+GV W S+W+A G Y LHED+K+R +++ + AG++++ IER Sbjct: 1 MGQKVHPIGYRIGVIRDWESKWYAVGKNYVKNLHEDIKLRSWIKKRWEGAGISRVEIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R +++ARPG++IGK+G ++ K++ +L +T + + L+V E+ P+++A L+A+ I Sbjct: 61 GKVIRFTLWTARPGVVIGKQGAELTKVKDELQALTGTRVMLNVQEIKNPDVDAQLVAEGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A LERRV FRRAMK+A+ M+ G G+K+ SGRL GAE++RTE Y +GR+PL TLRA Sbjct: 121 ASALERRVSFRRAMKQAMFRTMKAGGLGIKIQCSGRLGGAEIARTEWYNDGRLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY A T YG+ G+K ++ ++ ++ + P + Sbjct: 181 DVDYSCVKAVTMYGAIGVKCWIYRDEKALNTAAPRPVRSRANKREG 226 >gi|291521892|emb|CBK80185.1| SSU ribosomal protein S3P [Coprococcus catus GD/7] Length = 220 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 3/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WNSRW+A +++ L ED KIR YL+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWNSRWYAD-ADFADNLIEDHKIRTYLKKRLYSAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++IVY+A+PG++IG++G++IEK++ +L TN ++ + + EV PE +A L+A++I Sbjct: 60 SDRVKVIVYTAKPGVVIGRQGSEIEKVKAELKQFTNKKLLIDIKEVKLPECDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 A QLE R+ FRRAMK ++Q MR G G+K SGRL GA+++RTE Y EG +PLQTL Sbjct: 120 AAQLENRISFRRAMKSSMQKTMRSRGGVKGIKTSVSGRLGGADMARTEFYSEGTIPLQTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 RA IDYG A A T YG G+K ++ + + Sbjct: 180 RADIDYGFAEANTTYGKVGVKTWIYHGEVLP 210 >gi|261885695|ref|ZP_06009734.1| 30S ribosomal protein S3 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 232 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+N I RLG+N W SRWF + + ED KIR++L+ L AGV++IL+ERT Sbjct: 1 MGQKVNTIGLRLGINRNWESRWFPSKATLPENIGEDYKIRKFLKTKLYYAGVSQILVERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPG+IIGKKG +IE +R +++ + N +I +++ E K +A L A+++ Sbjct: 61 AKKLRVTVVAARPGIIIGKKGGEIENLRSEVTKLVNKDIAINIKEERKAGSSAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q A + GA G+KV +GRL GAE++RTE YLEGRVPL TLRA Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKVSVAGRLGGAEMARTEWYLEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG+ G+KV++ + + +D + + R + Sbjct: 181 RIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQADKNEDTSPKKPRRARRG 231 >gi|78185528|ref|YP_377962.1| 30S ribosomal protein S3 [Synechococcus sp. CC9902] gi|123743495|sp|Q3AUX0|RS3_SYNS9 RecName: Full=30S ribosomal protein S3 gi|78169822|gb|ABB26919.1| SSU ribosomal protein S3P [Synechococcus sp. CC9902] Length = 242 Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 96/230 (41%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y +LL ED +IR+++ AG++ +LI R Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKTYPSLLQEDDRIRKFIHKKYGSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRAGIQKTVGDKSRQVRINVVEVERVDGDAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T V +T YG GIKV+V + +++ T+P A R + Sbjct: 181 LRADIDYATKVGKTTYGVLGIKVWVFKGEVLNEQSQTMPVGANPRRRASR 230 >gi|256371221|ref|YP_003109045.1| ribosomal protein S3 [Acidimicrobium ferrooxidans DSM 10331] gi|256007805|gb|ACU53372.1| ribosomal protein S3 [Acidimicrobium ferrooxidans DSM 10331] Length = 288 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 145/210 (69%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLGV W SRW+A +Y L ED +IR++LQ L+ A V+++ IERT Sbjct: 1 MGQKVHPYGFRLGVTTDWKSRWYAD-KDYQRWLIEDEQIRQWLQRELRTASVSRVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119 R+ +++ARPG++IGKKG ++E++R++L + L+V E+ +P+++AT++AQS Sbjct: 60 RDRVRVDIHTARPGIVIGKKGVEVERLRRELERRCAPARVQLNVEEIRQPDLDATIVAQS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ RRV FRRAMKRA+Q AM+ GA G+ SGRL GAE++R E + EGRVP TLR Sbjct: 120 IADQISRRVSFRRAMKRAIQVAMKEGARGITAQCSGRLGGAEMARRETHREGRVPRHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 A ID+G A T YG G+KV++ D V Sbjct: 180 ADIDFGLREARTTYGQIGVKVWIYKGDVVP 209 >gi|168187808|ref|ZP_02622443.1| ribosomal protein S3 [Clostridium botulinum C str. Eklund] gi|169294315|gb|EDS76448.1| ribosomal protein S3 [Clostridium botulinum C str. Eklund] Length = 221 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 97/221 (43%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV W+++W+A + L ED KIR++++ AG+AKI IERT Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANSHNFADNLIEDNKIRKFVKKKSYSAGIAKIEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K +I +++ +PG+IIGK G IE+++ ++ M + +++ EV +PE +A L++++ Sbjct: 61 AKRVKINIHTGKPGMIIGKGGKGIEELKSEILKMIKEKNVIINIVEVKRPETDAQLMSEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLE+R+ FRRAMK+ +Q AMR GA GVK+ SGRL GAE++RTE Y EG +PLQTLR Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMRSGAKGVKIACSGRLGGAEIARTEQYHEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A IDYG A A+T YG G+KV++ + + Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYKGEVLPTKKVRTEQISQ 221 >gi|299139136|ref|ZP_07032312.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX8] gi|298598816|gb|EFI54978.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX8] Length = 223 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 107/218 (49%), Positives = 149/218 (68%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+N W SRWF + LL ED+K++ L+ LK AGV+ + +ER Sbjct: 1 MGQKVHPYGFRLGINKPWKSRWFTE-RGFDKLLVEDVKLKAELREKLKAAGVSSVEVERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG+IIG+KG +I+K++ + TN E+ + + EV KPE++A L+A++I Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIDKLKADIQKRTNREVFIDILEVNKPELDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A A T YG G+K +V D PA Sbjct: 180 DIDYGFAEAHTTYGIIGVKTWVYRGDIYEQKKRREPAP 217 >gi|291166873|gb|EFE28919.1| 30S ribosomal protein S3 [Filifactor alocis ATCC 35896] Length = 265 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 102/221 (46%), Positives = 148/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GVN W+SRWFA ++ A + ED IRE+++ L AG++KI IER Sbjct: 1 MGQKVSPHGLRVGVNKNWDSRWFANKKDFAANIKEDSVIREFVKKKLYLAGISKIEIERQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K R+ +++A+PG IIGK G IE+++ + + ++ ++V EV +PE++A L+A++ Sbjct: 61 GKTVRLNIFTAQPGRIIGKGGQGIEELKLDVEKICKDKQVFVNVVEVKRPEVDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA LERR+ FRRAMK+A+Q AMR GA G+KV SGR+ GAE++RTE Y EG VPL TLR Sbjct: 121 IALALERRIAFRRAMKQAMQRAMRAGAKGIKVSTSGRVGGAEMARTEGYAEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A I YG A A+T YG G+KV++ + + + E Sbjct: 181 ADIGYGFAEADTTYGKLGVKVWICNGEILPTRNGPKREIED 221 >gi|226226285|ref|YP_002760391.1| 30S ribosomal protein S3 [Gemmatimonas aurantiaca T-27] gi|259495248|sp|C1A6R1|RS3_GEMAT RecName: Full=30S ribosomal protein S3 gi|226089476|dbj|BAH37921.1| 30S ribosomal protein S3 [Gemmatimonas aurantiaca T-27] Length = 219 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 108/212 (50%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI FRLGV W S W+A E ALL ED +R+YL+ L A +A + IER Sbjct: 1 MGQKTNPIGFRLGVTKNWRSTWYA-KKEMPALLKEDALLRKYLKARLDNAAIADVTIERK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V++ RPG++IGKKG +++K+R +L+ +T E+ ++V E+ +PE+ A L+A +I Sbjct: 60 PGKVVVTVHTGRPGVVIGKKGAEVDKLRDELAQLTGKEVGINVEEIKRPEVEAQLVADNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL +R+ FRRAMKRAVQSAMR GA G+KV A GRL GAE++R E Y+EGRVPL TLRA Sbjct: 120 AAQLSQRISFRRAMKRAVQSAMRMGALGIKVKAGGRLGGAEIARVEGYMEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 I+Y T+ A+T YG+ G+KV++ + V D Sbjct: 180 DINYATSTAKTTYGTIGVKVWIFKGEIVEDRR 211 >gi|328953152|ref|YP_004370486.1| ribosomal protein S3 [Desulfobacca acetoxidans DSM 11109] gi|328453476|gb|AEB09305.1| ribosomal protein S3 [Desulfobacca acetoxidans DSM 11109] Length = 216 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 109/214 (50%), Positives = 151/214 (70%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIE 58 MGQK++P+ FRLG W+S WFAR Y LL ED KIR++++ L+ AG+A I IE Sbjct: 1 MGQKVHPVGFRLGSYRRWHSYWFAR-KNYSDLLLEDQKIRKFIKNEKELQGAGIAAIDIE 59 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R ++ ++++RPG++IG+KG IE++R+KL + E+ + ++EV KPE+NA L+A+ Sbjct: 60 RAANKVKMKIHTSRPGIVIGQKGKKIEELRQKLQRLIGRELIVDIHEVRKPELNAQLVAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLERRV FRRAMK+AV AM+FGA G+KV +GRL GAE++R E Y EGRVPL TL Sbjct: 120 NIALQLERRVAFRRAMKKAVGQAMKFGAQGIKVRVAGRLGGAEMARREWYREGRVPLHTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 RA IDYG A A T YG GIK ++ + +S+ Sbjct: 180 RADIDYGVAEARTTYGVIGIKAWIFKGEILSEDR 213 >gi|315925250|ref|ZP_07921464.1| 30S ribosomal protein S3 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621484|gb|EFV01451.1| 30S ribosomal protein S3 [Pseudoramibacter alactolyticus ATCC 23263] Length = 240 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 99/226 (43%), Positives = 149/226 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+N FR+GV WN++W+A + L ED K+R+Y++ QAG++KI+IER Sbjct: 1 MGQKVNAFGFRVGVIKDWNAKWYANDKNFADNLIEDNKLRQYIKTSQFQAGISKIVIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +Y+A+PG+IIG+ G I+ ++ +L M + +++ EV +++A LIA++I Sbjct: 61 GNKVRIHIYTAKPGMIIGRGGAGIDALKAELEKMIKKTVFINIVEVKNIDMDAQLIAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+A+Q MR GA G+K + SGRLNGAE++R E Y +G VP+QTLRA Sbjct: 121 AGQLERRISFRRAMKQAMQRTMRAGAKGIKTLVSGRLNGAEIARKEGYAQGNVPMQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 I YG A A+T YG G+KV+V+ + ++ + + A + Sbjct: 181 DISYGFAEADTTYGKLGVKVWVNKGEILTGREDVLADAAKADSSRG 226 >gi|237751230|ref|ZP_04581710.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879] gi|229372596|gb|EEO22987.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879] Length = 229 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 108/220 (49%), Positives = 145/220 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + ED IR++L+ L A V++I+IER Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPNAQNTPERIGEDHIIRKFLKKELYYASVSEIIIERM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ V +A+PGLIIGKKG DIEK+++ L + N ++ +++ EV + + NA L A+S+ Sbjct: 61 ATKLRVTVVAAKPGLIIGKKGADIEKVKETLRKLVNKDVAINIKEVKRAQANAQLAAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 AMQLERRVAFRRAMKKVMQQAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A T YG G+KV++ + + T Sbjct: 181 KIDYGFAEAATTYGIIGVKVWIFKGEVLQKGIQTEREESK 220 >gi|295101420|emb|CBK98965.1| SSU ribosomal protein S3P [Faecalibacterium prausnitzii L2-6] Length = 234 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 98/230 (42%), Positives = 135/230 (58%), Gaps = 12/230 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + +Y A+PG++IGK G + ++ KL+ + ++V EV NA Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSAATNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++R E Y Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARVESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 EG +PLQTLRA IDYG A A T YG G+KV+V + + + + Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKNAQKKE 230 >gi|160894750|ref|ZP_02075525.1| hypothetical protein CLOL250_02301 [Clostridium sp. L2-50] gi|156863684|gb|EDO57115.1| hypothetical protein CLOL250_02301 [Clostridium sp. L2-50] Length = 221 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 137/211 (64%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE--YGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+NP R+GV W+SRW+A + L ED KIR YL+ L A ++KI IE Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYADTKNDEFSNNLVEDHKIRTYLKKTLYNANISKIEIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R ++ +Y+A+PG+IIGK G IEKI+ +T+ ++ + V E+ KP+ +A L+A+ Sbjct: 61 RAADRVKVALYTAKPGVIIGKGGAGIEKIKADAQKLTDKKLFIDVKEIKKPDADAQLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE R+ FR+AMK + M+ GA G+K SGRL GA+++RTE Y +G +PLQTL Sbjct: 121 NIAAQLENRISFRKAMKSCMSRTMKTGALGIKASCSGRLGGADMARTEFYSQGTIPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 RA IDYG A A+T +G G+K +V + + Sbjct: 181 RADIDYGFAEADTTFGKVGVKTWVYHGEVLP 211 >gi|260655377|ref|ZP_05860865.1| ribosomal protein S3 [Jonquetella anthropi E3_33 E1] gi|260629825|gb|EEX48019.1| ribosomal protein S3 [Jonquetella anthropi E3_33 E1] Length = 227 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 154/226 (68%), Gaps = 3/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI +R+GV W S+W+A G Y LH+DLK+RE+++ + +G++++ IER Sbjct: 1 MGQKVHPIGYRIGVIRDWESKWYASGKNYHESLHQDLKLREWIKSRWEGSGISRVEIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R +++ARPG++IGK+G +I K+++ L T + + ++V E+ PE++A L+A+++ Sbjct: 61 GKIMRFTIWTARPGVVIGKQGAEINKLKEDLQAKTGTRVMINVQEIKNPEVDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + LE R+ FRRAMK+ + MR G G+K+ SGRL GAE++RTE Y EGR+PL TLRA Sbjct: 121 SSALENRISFRRAMKQGLFRTMRAGGLGIKIQCSGRLGGAEIARTEWYNEGRLPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DYG +VA+T YG+ G+KV++ ++ + T + R K+ Sbjct: 181 DVDYGLSVAKTMYGTIGVKVWIYRDEKAIN---TAAPRQPRRGRKE 223 >gi|261415813|ref|YP_003249496.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372269|gb|ACX75014.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326260|gb|ADL25461.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 219 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 104/220 (47%), Positives = 153/220 (69%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K +P RLGV W S+W+A + LL+ED+ +R YL + A ++K+ IERT Sbjct: 1 MGHKTHPNGLRLGVIRGWESKWYAEDK-FADLLYEDIVLRRYLMKRFEHASLSKVGIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +Y+ARPG++IGKKG ++E+++ +L +T EI+++V+E+ +PE +A L+A++I Sbjct: 60 VKKVNVNLYTARPGIVIGKKGEELERLKGELQFLTGKEIYIAVHEIKRPETDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+R+ FRRAMKRA+QSAMR G +G+KV GRL GAE++R E Y EGRVPL TLRA Sbjct: 120 ARQLEKRISFRRAMKRAIQSAMRMGVEGIKVQCGGRLGGAEIARVEKYAEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY TA+A+T YG+ GIKV++ +++ E Sbjct: 180 DIDYATAIAKTVYGAIGIKVWIMHGEKIGKDVMNDNKREK 219 >gi|329942417|ref|ZP_08291227.1| ribosomal protein S3 [Chlamydophila psittaci Cal10] gi|313847654|emb|CBY16642.1| 30S ribosomal protein s3 [Chlamydophila psittaci RD1] gi|325507321|gb|ADZ18959.1| 30S ribosomal protein S3 [Chlamydophila psittaci 6BC] gi|328815327|gb|EGF85315.1| ribosomal protein S3 [Chlamydophila psittaci Cal10] gi|328914291|gb|AEB55124.1| ribosomal protein S3 [Chlamydophila psittaci 6BC] Length = 223 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 105/218 (48%), Positives = 148/218 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREFLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY TA A T YG G+KV+++L ++VS + S + AA Sbjct: 181 DIDYATASAATTYGIIGVKVWINLGEKVSTASSNVGAA 218 >gi|312899049|ref|ZP_07758433.1| ribosomal protein S3 [Megasphaera micronuciformis F0359] gi|310619834|gb|EFQ03410.1| ribosomal protein S3 [Megasphaera micronuciformis F0359] Length = 223 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 95/220 (43%), Positives = 152/220 (69%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+N FR+GV W+++W+A +Y LL+ED++IRE+L+ L AGV++I IER+ Sbjct: 1 MGQKVNAHGFRVGVVKPWDAKWYAE-KDYATLLNEDVRIREFLKKQLYIAGVSRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K ++I+++A+PG++IG+ G IE I+K L T+ + +++ E+ + E++ATL+A+++ Sbjct: 60 AKRIKLIIHTAKPGMVIGRGGAGIEDIKKALKAFTDKTVDVNIAEIKQSELDATLVAENV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+++ MR GA G+K++ SGRL GAE++R+E +G +PL T+RA Sbjct: 120 ASQLERRIGFRRAMKQSIGRTMRMGAQGIKIMCSGRLGGAEIARSESVRDGSIPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYGTA A T YG GIK ++ + + ++ Sbjct: 180 DIDYGTAEAHTTYGCIGIKCWIYKGEILPEAKKAPQNKRE 219 >gi|320160420|ref|YP_004173644.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1] gi|319994273|dbj|BAJ63044.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1] Length = 225 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 149/219 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K+NP+ FRL VN W SRWFA G EY L +D +IR+ ++ + AGV+++ +ER Sbjct: 1 MGRKVNPVGFRLVVNKAWESRWFADGKEYTQNLQQDFQIRKLVREIAENAGVSRVEVERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+IV++A+PG++IG+KG ++K+R+ L +T +I L + E+ P+ +A L+A+++ Sbjct: 61 PGKVRVIVFTAKPGILIGRKGESVKKLRQDLEALTGKKIDLEIKEIKNPDTDALLVAENL 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERRV +RRAMKRA+Q AMR GA G+KV GRL+GAE+SR+ EGRVPLQTLRA Sbjct: 121 ASQIERRVSYRRAMKRALQQAMRQGAKGIKVEVQGRLSGAEMSRSVWLREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 ID+ A A T YG G+KV+V + + + E Sbjct: 181 DIDFARAEALTTYGRIGVKVWVYKGEMAPEVEEKAEPTE 219 >gi|315453729|ref|YP_004073999.1| 30S ribosomal protein S3 [Helicobacter felis ATCC 49179] gi|315132781|emb|CBY83409.1| 30S ribosomal protein S3 [Helicobacter felis ATCC 49179] Length = 235 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 112/208 (53%), Positives = 150/208 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF + + ED +IR++L+ L AGV++I+IER Sbjct: 1 MGQKVNPIGLRLGINKNWASRWFPGTHDTVQNIEEDHRIRKFLKKELYYAGVSEIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI V +ARPGLIIGK+G DIEKI+ L N+ +I LS+ EV +P+ +A L+A+++ Sbjct: 61 AKKLRITVVAARPGLIIGKQGVDIEKIKVSLKNLIKRDIALSIKEVKRPQADAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQTAMKSGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG G+KV++ + + Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208 >gi|313677126|ref|YP_004055122.1| SSU ribosomal protein s3p [Marivirga tractuosa DSM 4126] gi|312943824|gb|ADR23014.1| SSU ribosomal protein S3P [Marivirga tractuosa DSM 4126] Length = 244 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NPI FRLG+ W S W+ + L ED KIREY+ + + G++KI+IER Sbjct: 1 MGQKVNPIGFRLGIVRGWESNWYGGKGLSFSDKLIEDQKIREYILARIPKGGISKIVIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T K + V++ARPG++IGK G++++K++++L +TN ++ +++ E+ +PE++A LI +S Sbjct: 61 TLKRITLTVHTARPGVVIGKGGSEVDKLKEELKKLTNKDVQINIFEIKRPELDAKLIGES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 I QQL+ R+ +RRAMK+A+ SAMR GA G+K+ SGRL GAE++RTE Y EGR+PL TLR Sbjct: 121 IGQQLKARISYRRAMKQAIASAMRVGAQGIKIKVSGRLGGAEMARTEMYKEGRIPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 A IDY T A T YG+ G+KV+V + D ++ K Sbjct: 181 ADIDYETTPAHTIYGTIGVKVWVFKGEVFGKRDLSLNVGAGAPGNKG 227 >gi|149072015|ref|YP_001293586.1| 30S ribosomal protein S3 [Rhodomonas salina] gi|172048718|sp|A6MW07|RR3_RHDSA RecName: Full=30S ribosomal protein S3, chloroplastic gi|134302966|gb|ABO70770.1| 30S ribosomal protein S3 [Rhodomonas salina] Length = 218 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 138/211 (65%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRL + T S WFA Y L ED IR Y++ +L AG++K+ I R Sbjct: 1 MGQKVHPLGFRLRITQTHRSSWFASSKNYPETLAEDYAIRNYVKVNLSSAGISKVEIHRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 + ++++RPG+I+G+ G+ I+ I++ L + N +I ++V E+ + +A LIA+ Sbjct: 61 SDQVELEIHTSRPGIIVGRSGSGIDTIKEDLRKIINKNNQIRINVTELKNVDADANLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLE+R+ FRRA ++A+Q A R G+KV SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FIAQQLEKRIAFRRATRQAIQRAQRANVQGIKVQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 RA IDY T A+T YG G+KV+V ++ Sbjct: 181 RADIDYATKEADTTYGKLGVKVWVFNGEKTP 211 >gi|255530520|ref|YP_003090892.1| 30S ribosomal protein S3 [Pedobacter heparinus DSM 2366] gi|255343504|gb|ACU02830.1| ribosomal protein S3 [Pedobacter heparinus DSM 2366] Length = 285 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYADKLVEDEKIRKYLSARIAKGGVAKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++KI+++L +T EI +++ E+ +PE++A L+A+ + Sbjct: 60 LKRITVTIHTARPGIVIGKAGQEVDKIKEELKKLTKKEIQINIFEIKRPELDAQLVAEGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA Sbjct: 120 AKQLEARISFRRAMKSTIASTMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211 >gi|269958590|ref|YP_003328377.1| 30S ribosomal protein S3 [Anaplasma centrale str. Israel] gi|269848419|gb|ACZ49063.1| 30S ribosomal protein S3 [Anaplasma centrale str. Israel] Length = 211 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 106/206 (51%), Positives = 148/206 (71%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A G Y + LHEDL +R +++ A V++++I R Sbjct: 1 MGQKSNPIGLRLRIVGTWDSLWYANGG-YASKLHEDLLLRSFVKKTFHHAAVSRVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++SARPG+IIGKKGTDI++++++++ M N ++ L + EV KP++ A LIA++I Sbjct: 60 VDAVIVNIHSARPGVIIGKKGTDIDRVKQRIAKMVNHDVELHIVEVKKPDLKAALIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKR VQ+ ++ GA GVKV SGRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKLGARGVKVSCSGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 +IDY A A+T YG G+KV+V + D Sbjct: 180 NIDYSCAEAKTIYGIVGVKVWVHVGD 205 >gi|225849542|ref|YP_002729707.1| ribosomal protein S3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225643333|gb|ACN98383.1| ribosomal protein S3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 226 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 106/225 (47%), Positives = 156/225 (69%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG+ W S+W+A +Y LLHEDL IR+++Q K AG+A ++IER Sbjct: 1 MGQKVHPIGFRLGITQDWRSKWYADKKKYTKLLHEDLAIRQFIQDRYKAAGIADVIIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 R+ + +ARPG++IG KGT++EK+ + L N+++ EI ++V+EV +PE+NA L+A+ Sbjct: 61 GDKLRVKILAARPGIVIGAKGTEVEKLNETLKNISSAKEILINVDEVKRPELNAKLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLERRV RRAMK+A+ +AM+ GA G+K GR+ G +L+R E ++ GR+PLQTL+ Sbjct: 121 IALQLERRVTHRRAMKKAIDAAMKAGAKGIKTQVGGRIGGVDLARKEWFMAGRMPLQTLK 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 A IDYGTA A T YG G+KV++ D+V I + ++ Sbjct: 181 ADIDYGTARASTKYGILGVKVWIYKGDKVESRVEEILSKVEEELK 225 >gi|160881779|ref|YP_001560747.1| ribosomal protein S3 [Clostridium phytofermentans ISDg] gi|189044971|sp|A9KJI8|RS3_CLOPH RecName: Full=30S ribosomal protein S3 gi|160430445|gb|ABX44008.1| ribosomal protein S3 [Clostridium phytofermentans ISDg] Length = 219 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 98/220 (44%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A +++ L ED IR YL+ L AGVAKI IER Sbjct: 1 MGQKVNPHGLRVGVINDWDSRWYAE-ADFADNLVEDYNIRTYLKKKLYSAGVAKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+++A+PG++IGK G +IEK++ +++ T +++L + E+ KP++ A L+A+SI Sbjct: 60 SDKLKVIIHTAKPGVVIGKGGAEIEKLKVEITQYTTKKLNLEIKEIKKPDVCAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ FRRAMK + MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AAQLENRISFRRAMKSTMSRTMRSGAKGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDYG A A+T +G G+K ++ + + + ++ Sbjct: 180 DIDYGFAEADTTFGKLGVKAWIYHGEVLPTKGNKKEGSDK 219 >gi|313904946|ref|ZP_07838317.1| ribosomal protein S3 [Eubacterium cellulosolvens 6] gi|313470203|gb|EFR65534.1| ribosomal protein S3 [Eubacterium cellulosolvens 6] Length = 218 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 144/211 (68%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+S+W+A +++ L ED KIR YL+ L +GV++I IER Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYAE-ADFADNLVEDYKIRTYLKKRLYTSGVSQIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +++++PG++IGK G++IEK++K+L T ++ + + EV +P+ +A L+A++I Sbjct: 60 SDRVKITIFTSKPGVVIGKGGSEIEKVKKELKQFTEKKLVVDIKEVKRPDRDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R+ +RRAMK A+Q MR GA G+K SGR+ GA+++R E Y EG +PLQTLRA Sbjct: 120 ALQLENRMSYRRAMKSAMQRTMRAGAKGIKTSVSGRIGGADMARREFYSEGNIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDYG A A+T YG G+K ++ + + Sbjct: 180 DIDYGFAEADTTYGKVGVKTWIYNGEVLPTK 210 >gi|730657|sp|P41118|RS3_ACHSP RecName: Full=30S ribosomal protein S3 gi|456688|gb|AAB88907.1| ribosomal protein S3 [Acholeplasma palmae] Length = 248 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 102/240 (42%), Positives = 147/240 (61%), Gaps = 13/240 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ +W S+W+A + AL++ED IR+YL K+AGV++I IER Sbjct: 1 MGQKTNPNGLRLGIIRSWESKWYANEKDVPALINEDYNIRKYLNKVYKKAGVSQIEIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 ++ +Y+A+PG++IG+ G K +L +T EI +V EV +PE A L+ Sbjct: 61 KGKAKDRIKVTLYTAKPGIVIGRDGETRNKAVSELEYLTKKEIVFNVVEVKRPEKVAELV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R FRR K A+Q A++ GA GVK + SGRL GAE++R+E Y EGRVPL Sbjct: 121 AQNMAEQLENRASFRRVQKIAIQRALKSGAKGVKTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---------DSTIPAAEHRVVEKDS 227 TLRA +DY TA A T YG GIKV+V + + +++ P + R ++ + Sbjct: 181 TLRADVDYATAEAHTTYGVLGIKVWVFHGEVLPGQTILDTRKPFEASAPRPQRRNRKEAN 240 >gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1] gi|27734542|sp|Q9RXJ6|RS3_DEIRA RecName: Full=30S ribosomal protein S3 gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1] Length = 249 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 109/215 (50%), Positives = 143/215 (66%), Gaps = 1/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP FRLGV WNSRW+A +Y +LL ED +IR+ + L AG+A+I IER Sbjct: 1 MGNKINPNGFRLGVTKGWNSRWYAGKKQYASLLKEDEQIRQLINKKLAAAGIARIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + +I+ +A+PG++IGK G I+++R + + + + ++V E+P P I+A L+A Sbjct: 61 GQQVNVIISAAKPGVVIGKGGESIKELRGDIERLVSAGTVAVNVAEIPNPNISAPLVALR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+ERR FRRAMK+A Q M GA GVKVI SGRL GAE +RTE LEGRVPL TLR Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A IDYGTA+A T YG GIKV V + + T Sbjct: 181 ADIDYGTALARTTYGILGIKVLVFNGEVIGGKTET 215 >gi|224370685|ref|YP_002604849.1| RpsC [Desulfobacterium autotrophicum HRM2] gi|259495242|sp|C0Q9W7|RS3_DESAH RecName: Full=30S ribosomal protein S3 gi|223693402|gb|ACN16685.1| RpsC [Desulfobacterium autotrophicum HRM2] Length = 215 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 108/216 (50%), Positives = 152/216 (70%), Gaps = 1/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RL + TW+SRW+A Y + ED K+R +L+ L AG++KI IER Sbjct: 1 MGQKVNPIGLRLNIVKTWDSRWYAD-KNYADFVFEDYKLRAFLKKKLFHAGISKIEIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K RI V++ARPG+IIGKKG++I ++K++ M E+ + + E+ +PEI+A L+A++I Sbjct: 60 TKRIRIRVFAARPGIIIGKKGSEIALLKKEIEQMITPEVLIDIQEIRRPEIDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERR+ FRRAMKR+V SAMRFGA G+K+I SGRL GAE++RTE Y EGR+PL TLRA Sbjct: 120 SAQLERRIAFRRAMKRSVSSAMRFGAQGIKIICSGRLGGAEMARTEWYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 +DYG A+T YG+ GIK ++ + + + Sbjct: 180 DVDYGFTEAKTTYGAIGIKTFIFKGEVLKADRNVKA 215 >gi|284040615|ref|YP_003390545.1| ribosomal protein S3 [Spirosoma linguale DSM 74] gi|283819908|gb|ADB41746.1| ribosomal protein S3 [Spirosoma linguale DSM 74] Length = 302 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 104/218 (47%), Positives = 154/218 (70%), Gaps = 2/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ RLG+ W S W+ G E+ L ED KIR+Y+ + + +A+++IERT Sbjct: 1 MGQKINPVGLRLGIVRGWESSWY-GGKEFSEKLVEDEKIRKYVAARIPKGAIARVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PEI+A L+ ++I Sbjct: 60 LKRVTLTIHTARPGIVIGKGGGEVDKIKEELKKITGKDVQINIFEIKRPEIDAKLVGEAI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL+ R+ FRRAMK+A+QSA+R GA G+KV SGRL GAE++R+E Y EGRVPL TLRA Sbjct: 120 AQQLQARISFRRAMKQAIQSAIRVGAQGIKVKVSGRLGGAEIARSEQYKEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY + A+T YG GIKV++ + EV PAA Sbjct: 180 DIDYAISEAQTVYGKIGIKVWIF-KGEVYGKRDLSPAA 216 >gi|224542244|ref|ZP_03682783.1| hypothetical protein CATMIT_01419 [Catenibacterium mitsuokai DSM 15897] gi|224524786|gb|EEF93891.1| hypothetical protein CATMIT_01419 [Catenibacterium mitsuokai DSM 15897] Length = 217 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 101/214 (47%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+GVN W+SRW+A ++ L ED+KIRE+L LK+A VAKI IER+ Sbjct: 1 MGQKVSPVGFRVGVNREWSSRWYADKKDFANYLLEDVKIREFLMAKLKKAYVAKIDIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119 K I V+++RPG++IGK G I+ +RK+L +++ ++ ++V E+ + NA L+A Sbjct: 61 KKRVNIFVHTSRPGVVIGKDGEAIDALRKELMGLISDKKVFINVVEIKNADTNAQLVADR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE R FR KRA+Q+AMR GA G+K SGRL GA+++R+E Y EG VPL T+R Sbjct: 121 IAEQLENRASFRTVQKRAIQNAMRNGAKGIKTSVSGRLGGADIARSEGYSEGVVPLHTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A IDY TA A T YG G+KV++ + + Sbjct: 181 ADIDYATAEAATTYGKLGVKVWICKGEILPAKKK 214 >gi|308178130|ref|YP_003917536.1| 30S ribosomal protein S3 [Arthrobacter arilaitensis Re117] gi|307745593|emb|CBT76565.1| 30S ribosomal protein S3 [Arthrobacter arilaitensis Re117] Length = 260 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 4/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP FRLG+ S WFA G Y + ED++IR L + +AG+A++ Sbjct: 1 MGQKINPNGFRLGITTDHVSHWFADSSKPGQRYADYVKEDVQIRALLSNGMDRAGIARVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV P++ A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTKKQVQLNILEVKNPDMEAMLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAMK+A+QSAMR GA G++V SGRL GAE+SR E Y EGRVPL Sbjct: 121 AQGIAEQLASRVAFRRAMKKAMQSAMRAGAKGIRVQCSGRLGGAEMSRKEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 TLRA+ID+G A+T +G G+KV++ D Sbjct: 181 TLRANIDFGKFEAKTTFGRIGVKVWIYKGDV 211 >gi|224373643|ref|YP_002608015.1| 30S ribosomal protein S3 [Nautilia profundicola AmH] gi|254764538|sp|B9L6M7|RS3_NAUPA RecName: Full=30S ribosomal protein S3 gi|223589411|gb|ACM93147.1| ribosomal protein S3 [Nautilia profundicola AmH] Length = 240 Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+N W SRWF + + D ++R++L+ L AG++ I+IERT Sbjct: 1 MGQKTNPIGLRLGINKNWRSRWFINYNTMPENVLGDYELRKFLKKKLYYAGISDIIIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119 K RI +++A+PG+IIGK G++IE ++ +L + N E+ L++ E KP+++A L A++ Sbjct: 61 AKKIRITIFAAKPGIIIGKGGSEIEALKAELQKRIGNKELILNIKEERKPQLSAQLAAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A Q+ERRV FRRAMK+ +QSA++ GA G+KV +GRLNGAE++RTE YLEGRVPL TLR Sbjct: 121 VATQIERRVAFRRAMKKVIQSALKSGAKGIKVQVAGRLNGAEMARTEWYLEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDYG A A T YG G+KV++ + + ++ A Sbjct: 181 AKIDYGFAEALTTYGIIGVKVWIFKGEVLQRKMNSDDTATPER 223 >gi|149279658|ref|ZP_01885787.1| 30S ribosomal protein S3 [Pedobacter sp. BAL39] gi|149229694|gb|EDM35084.1| 30S ribosomal protein S3 [Pedobacter sp. BAL39] Length = 281 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYADKLVEDEKIRKYLSARIAKGGVAKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++KI+++L +T EI +++ E+ +PE++A L+A+ + Sbjct: 60 LKRITVTIHTARPGIVIGKAGQEVDKIKEELKKLTKKEIQINIFEIKRPELDAQLVAEGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK + + MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA Sbjct: 120 AKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211 >gi|261367797|ref|ZP_05980680.1| ribosomal protein S3 [Subdoligranulum variabile DSM 15176] gi|282570595|gb|EFB76130.1| ribosomal protein S3 [Subdoligranulum variabile DSM 15176] Length = 234 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 100/234 (42%), Positives = 143/234 (61%), Gaps = 12/234 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRWF +G L ED KIR+ L+ L AGV KI IERT Sbjct: 1 MGQKVNPHGMRVGVIKDWDSRWFTSKQAFGDTLVEDHKIRKTLKKQLYAAGVPKIEIERT 60 Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 ++ V+ A+PG++IGK G + K+ K+L+ +T ++L++ EV NA Sbjct: 61 VDSQTGAPRVKVNVFCAKPGIVIGKGGAESAKLEKQLAKLTGKAVNLNIIEVKGTTTNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168 L+A+ +A QLERR+ FRRAMK+A+++AM+ G+KV SGRL GA+++RTE Y Sbjct: 121 LVAEDVASQLERRIAFRRAMKQAIRNAMQPRDRSATPAKGIKVTCSGRLAGADIARTESY 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 EG +PLQTLRA IDYG A A T YG G+KV++ + + + + + Sbjct: 181 HEGTIPLQTLRADIDYGFAEANTTYGKVGVKVWIYKGEILKGAKAPAKKEGGKQ 234 >gi|88607248|ref|YP_504898.1| 30S ribosomal protein S3 [Anaplasma phagocytophilum HZ] gi|123736446|sp|Q2GL53|RS3_ANAPZ RecName: Full=30S ribosomal protein S3 gi|88598311|gb|ABD43781.1| ribosomal protein S3 [Anaplasma phagocytophilum HZ] Length = 211 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 107/206 (51%), Positives = 145/206 (70%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHEDL +R +++ A V+K++I R Sbjct: 1 MGQKSNPIGLRLKIVGTWDSLWYAN-RDYATKLHEDLLLRSFVKKTFHHAAVSKVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I ++SARPG+IIGKKG DI++I++K++ M N E+ L + EV KP++ A LIA++I Sbjct: 60 VDAVIINIHSARPGVIIGKKGVDIDRIKQKIAKMVNHEVELHIVEVKKPDLKAVLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMKR VQ+ ++ GA GVKV +GRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKMGAKGVKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 +IDY A+T YG G+KV+V + D Sbjct: 180 NIDYSCVEAKTIYGIVGVKVWVYVGD 205 >gi|291277262|ref|YP_003517034.1| 30S ribosomal protein S3 [Helicobacter mustelae 12198] gi|290964456|emb|CBG40306.1| 30S ribosomal protein S3 [Helicobacter mustelae 12198] Length = 233 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF A + ED KIR++L+ L AG+++I+IER Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPSTQSTPANIAEDYKIRKFLKKELYYAGISEIIIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIE+++ L + + E +++ EV +P+ NA L A+++ Sbjct: 61 AKKIRVTVVAARPGLIIGKKGADIERVKDSLKAIIHKEATINIKEVKRPQANAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +QSAM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 AIQLEKRVAFRRAMKKVMQSAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226 IDYG A A T YG G+KV++ + + S+ E + + Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFRGEVLQKGIQSEKKEDSQDREVKKNRRG 231 >gi|327383511|gb|AEA54987.1| 30S ribosomal protein S3 [Lactobacillus casei LC2W] gi|327386704|gb|AEA58178.1| 30S ribosomal protein S3 [Lactobacillus casei BD-II] Length = 220 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 152/214 (71%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 I+Y A T YG GIK +++ + + + Sbjct: 180 DIEYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213 >gi|163783273|ref|ZP_02178266.1| 50S ribosomal protein L2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881381|gb|EDP74892.1| 50S ribosomal protein L2 [Hydrogenivirga sp. 128-5-R1-1] Length = 231 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLGV +W+S+W+A EY LHEDLKI+ Y++ K AG+++I +ER Sbjct: 1 MGQKTHPIGFRLGVTKSWDSKWYAPKKEYAQTLHEDLKIKRYIKDRYKVAGISRIDVERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 +I VY++RP +IIG+KG ++E ++K + M E+ ++V EV PE +A L+A+ Sbjct: 61 VDKLKIRVYASRPAIIIGRKGQEVELLKKTIEKMISGKEVTINVTEVRVPEADAQLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A++ GA GVK+ GR+ GAEL+R E +L GR+PLQTLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNALKAGAKGVKIQVKGRIGGAELARKEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 A IDYG A A T YG +KV++ D + + + K Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDILKGGKEEVLKKIEEDLAK 226 >gi|86610034|ref|YP_478796.1| 30S ribosomal protein S3 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123751651|sp|Q2JIM1|RS3_SYNJB RecName: Full=30S ribosomal protein S3 gi|86558576|gb|ABD03533.1| ribosomal protein S3 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 256 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 14/227 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLGV SRWFA + Y ALL ED +IR YL L AG+A I IER Sbjct: 1 MGQKIHPTGFRLGVIKEHRSRWFADPARYPALLQEDDQIRTYLTKQLSSAGLADIQIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------------TNSEIHLSVNEV 106 + + +ARPG+++G+ G+ +E +R+ L I ++V EV Sbjct: 61 ADQIDLEIRAARPGVVVGRGGSSLETLRQGLQKELSALAGQSPGSRGGGERTIRINVVEV 120 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 + + ATL+A++IAQQLERR+ FRR +++ +Q A R G G+K+ +GRLNGAE++RTE Sbjct: 121 TRADAEATLLAENIAQQLERRIAFRRIVRQVIQRAQRAGVQGIKIQIAGRLNGAEIARTE 180 Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 EGR+PL TLRA IDY +A T +G G+KV+V + + + Sbjct: 181 WTREGRIPLHTLRADIDYAEHLAHTTFGIIGVKVWVFKGEVLPGQER 227 >gi|188996233|ref|YP_001930484.1| ribosomal protein S3 [Sulfurihydrogenibium sp. YO3AOP1] gi|226697766|sp|B2V7K7|RS3_SULSY RecName: Full=30S ribosomal protein S3 gi|188931300|gb|ACD65930.1| ribosomal protein S3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 227 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 151/216 (69%), Gaps = 1/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W S+W++ +Y LHED+KIR++++ KQAG++ +LIER Sbjct: 1 MGQKVHPTGFRLGITQDWKSKWYSEKKKYTQTLHEDIKIRKFIEERYKQAGISSVLIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 R+ + +ARPG++IG KG ++EK+ + + +T+ E+ ++V+EV KPE++A L+A+ Sbjct: 61 GDRMRVKIMAARPGIVIGAKGAEVEKLNEIIKKLTSTKEVIVNVDEVKKPELDAKLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLERRV RRAMK+A+ SA++ GA G+K GR+ G +L+R E ++ GR+PLQTL+ Sbjct: 121 IALQLERRVTHRRAMKKAIDSALKAGAKGIKTQVGGRIGGVDLARKEWFMAGRMPLQTLK 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A IDYGTA A T YG GIKV++ D++ + Sbjct: 181 ADIDYGTARASTKYGILGIKVWIYKGDKLEGKAEEV 216 >gi|72382961|ref|YP_292316.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL2A] gi|91207829|sp|Q46IR5|RS3_PROMT RecName: Full=30S ribosomal protein S3 gi|72002811|gb|AAZ58613.1| SSU ribosomal protein S3P [Prochlorococcus marinus str. NATL2A] Length = 244 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 95/230 (41%), Positives = 140/230 (60%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+W+A Y LL ED +IR +++ AG++ +LI R Sbjct: 1 MGHKIHPTGIRLGITQEHRSKWYAPSKTYPLLLQEDDRIRTFIKKKYLAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R +K N ++ ++V EV K + +A L+A Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRNRQVRINVVEVEKVDADAYLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 LRA IDY T VA T YG GIKV+V + + + +P + + Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLPKEEQPLPVGSSPRRSRGN 230 >gi|116515253|ref|YP_802882.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285351|sp|Q057B0|RS3_BUCCC RecName: Full=30S ribosomal protein S3 gi|116257107|gb|ABJ90789.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 235 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 103/222 (46%), Positives = 154/222 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +WNS WFA E+ L D K+R Y++ L +A V+K++IER Sbjct: 1 MGQKVHPNGMRLGIIKSWNSIWFASKKEFSNYLDSDFKVRSYVKKKLIKASVSKVIIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 KN R+ +Y+ARPG++IGKKG D+EK+R +++ +T ++++E+ KPE++A L+A +I Sbjct: 61 SKNIRVTIYTARPGIVIGKKGEDVEKLRIEIAKITGVPAQVNISEIRKPELDAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRA+KR+VQ+AMR GA G+K+ SGRL G E++R E Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAIKRSVQNAMRQGAKGIKIEVSGRLGGVEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 +I+Y T+ A T YG G+KV++ + + + + Sbjct: 181 NIEYNTSEAHTTYGIIGVKVWIFKGEILDGMLVVSNKKDKKP 222 >gi|123966967|ref|YP_001012048.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9515] gi|152060894|sp|A2BYT0|RS3_PROM5 RecName: Full=30S ribosomal protein S3 gi|123201333|gb|ABM72941.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9515] Length = 244 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 94/220 (42%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R Sbjct: 1 MGNKINPTGLRLGITQEHRSKWFATSKTYPILLQEDYKIRNFIQKKYSSAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAYLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++R+E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA +DY A T YG GIKV+V + + + TIP Sbjct: 181 LRAEVDYALREANTTYGVLGIKVWVFKGEVLPKEEQTIPV 220 >gi|312889361|ref|ZP_07748915.1| SSU ribosomal protein S3P [Mucilaginibacter paludis DSM 18603] gi|311298238|gb|EFQ75353.1| SSU ribosomal protein S3P [Mucilaginibacter paludis DSM 18603] Length = 308 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI RLG+ W+S WF G+ Y L ED KIR+Y+ + + GV+K++IERT Sbjct: 1 MGQKAHPIGNRLGIIRGWDSNWF-GGNNYSDKLVEDEKIRKYISVRIAKGGVSKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ I Sbjct: 60 LKRITVTIHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAQLVAEGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA Sbjct: 120 AKQLEARISFRRAMKTTIASTMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG G+KV++ + D Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211 >gi|126680610|gb|ABO26532.1| ribosomal protein S3 [Acholeplasma palmae] Length = 240 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 102/239 (42%), Positives = 145/239 (60%), Gaps = 13/239 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ +W S+W+A + AL++ED IR+YL K+AGV++I IER Sbjct: 1 MGQKTNPNGLRLGIIRSWESKWYANEKDVPALINEDYNIRKYLNKVYKKAGVSQIEIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 ++ +Y+A+PG++IG+ G K +L +T EI +V EV +PE A L+ Sbjct: 61 KGKAKDRIKVTLYTAKPGIVIGRDGETRNKAVSELEYLTKKEIVFNVVEVKRPEKVAELV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R FRR K A+Q A++ GA GVK + SGRL GAE++R+E Y EGRVPL Sbjct: 121 AQNMAEQLENRASFRRVQKIAIQRALKSGAKGVKTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---------DSTIPAAEHRVVEKD 226 TLRA +DY TA A T YG GIKV+V + + +++ P + R + Sbjct: 181 TLRADVDYATAEAHTTYGVLGIKVWVFHGEVLPGQTILDTRKPFEASAPRPQRRNRKGG 239 >gi|237736176|ref|ZP_04566657.1| SSU ribosomal protein S3P [Fusobacterium mortiferum ATCC 9817] gi|229421729|gb|EEO36776.1| SSU ribosomal protein S3P [Fusobacterium mortiferum ATCC 9817] Length = 218 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A EY HED+KIREY++ + AG+AK+ IERT Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIREYVKKNYFHAGIAKVKIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++ Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVNLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+ +AV AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR Sbjct: 121 IATSIEKRVAYKRAVSQAVMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY TA A T YG+ GIKV+V + + A Sbjct: 181 ADIDYATATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218 >gi|124026702|ref|YP_001015817.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL1A] gi|152060892|sp|A2C4Z3|RS3_PROM1 RecName: Full=30S ribosomal protein S3 gi|123961770|gb|ABM76553.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL1A] Length = 244 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 95/230 (41%), Positives = 140/230 (60%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ S+W+A Y LL ED +IR +++ AG++ +LI R Sbjct: 1 MGHKIHPTGIRLGITQEHRSKWYAPSKTYPLLLQEDDRIRTFIKKKYVAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R +K N ++ ++V EV K + +A L+A Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRNRQVRINVVEVEKVDADAYLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 LRA IDY T VA T YG GIKV+V + + + +P + + Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLPKEEQPLPVGSSPRRSRGN 230 >gi|159904213|ref|YP_001551557.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9211] gi|226697746|sp|A9BCP1|RS3_PROM4 RecName: Full=30S ribosomal protein S3 gi|159889389|gb|ABX09603.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9211] Length = 243 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR ++Q AG++ +LI R Sbjct: 1 MGHKIHPNGLRLGITQEHRSRWYASSKTYPTLLQEDDRIRGFIQKKYASAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V E+ + + +A L+A Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRSRQVRINVVEIERVDADAHLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY A T YG GIKV+V + +S D +P Sbjct: 181 LRAEIDYANKTANTTYGVLGIKVWVFKGEVLSKEDQPLPV 220 >gi|269122575|ref|YP_003310752.1| ribosomal protein S3 [Sebaldella termitidis ATCC 33386] gi|268616453|gb|ACZ10821.1| ribosomal protein S3 [Sebaldella termitidis ATCC 33386] Length = 218 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 145/218 (66%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TW+S+WFA G EY HEDLKIRE+++ + AGV+ I IERT Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYLNNFHEDLKIREFIKKNYYHAGVSCIQIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 II+ + + G++IG+KG +IE ++ K+ N+T ++ + V EV P N+ L+A+S Sbjct: 61 SPTELTIIIDTGKAGILIGRKGAEIEALKGKIENLTGKKVQVKVQEVKNPNKNSQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+ +A+Q A + G G+K+ SGRLNGAE++R+E L GRVPL TLR Sbjct: 121 IATAIEKRVAYKRAVSQAIQRAEKSGVKGIKIAVSGRLNGAEIARSEWTLSGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A +DY TA A T YG+ GIKV++ + + A Sbjct: 181 ADVDYATATAFTTYGALGIKVWIFNGEVLPSKKEGGNA 218 >gi|46446052|ref|YP_007417.1| 30S ribosomal protein S3 [Candidatus Protochlamydia amoebophila UWE25] gi|61215577|sp|Q6ME57|RS3_PARUW RecName: Full=30S ribosomal protein S3 gi|46399693|emb|CAF23142.1| probable 30S ribosomal protein S3 [Candidatus Protochlamydia amoebophila UWE25] Length = 214 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 104/214 (48%), Positives = 143/214 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRL W S+WFA E+G LL ED IR YL GV+ I I+R Sbjct: 1 MGQKVNPISFRLVRTRDWRSKWFANKKEFGDLLVEDQIIRAYLLKKPALVGVSAIKIKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +I+ ++ +LS +T E+ ++V EV +P+++A ++A SI Sbjct: 61 SGKVEVTIVTARPGLVIGKKGAEIDVLKGELSKLTGKEVWVAVEEVKRPDMDAKIVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR+ FRRAMK+A+QS++ GA G+KV SGR+ GAE++RTE Y EG PL TLRA Sbjct: 121 AKQLERRIPFRRAMKKAMQSSIDAGAFGIKVQLSGRIGGAEIARTEWYKEGSTPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDY T AET YGS G+KV++ ++ Sbjct: 181 DIDYATGRAETTYGSIGVKVWIYRGEDNLAKKEA 214 >gi|58384686|gb|AAW72701.1| 30S ribosomal protein S3 [Buchnera aphidicola (Cinara cedri)] Length = 235 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 154/222 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +WNS WFA E+ L D K+R Y++ L +A V+K++IER Sbjct: 1 MGQKVHPNGMRLGIIKSWNSIWFASKKEFSNYLDSDFKVRSYVKKKLIKASVSKVIIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N R+ +Y+ARPG++IGKKG D+EK+R +++ +T ++++E+ KPE++A L+A +I Sbjct: 61 SQNIRVTIYTARPGIVIGKKGEDVEKLRIEIAKITGVPAQVNISEIRKPELDAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + QLERRV+FRRA+KR+VQ+AMR GA G+K+ SGRL G E++R E Y EGRVPL TLRA Sbjct: 121 SSQLERRVMFRRAIKRSVQNAMRQGAKGIKIEVSGRLGGVEIARREWYREGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 +I+Y T+ A T YG G+KV++ + + + + Sbjct: 181 NIEYNTSEAHTTYGIIGVKVWIFKGEILDGMLVVSNKKDKKP 222 >gi|7388208|sp|Q9ZI44|RS3_AQUPY RecName: Full=30S ribosomal protein S3 gi|4165871|gb|AAD08791.1| ribosomal protein S3 [Aquifex pyrophilus] Length = 231 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 142/211 (67%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLGV W S+W+ +Y LLHEDLKI+ Y++ K AGV+K+ IER Sbjct: 1 MGQKTHPIGFRLGVIKDWPSKWYPPKKDYAKLLHEDLKIKNYIKKRYKVAGVSKVEIERI 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 RI +++A+P ++IG++G ++++++K + M EI +SV EV PE++A L+A+ Sbjct: 61 VDKVRIKIHTAKPAIVIGRRGQEVDRLKKTIERMLPGKEISISVLEVKVPELDAQLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A++ G GVKV GR+ GA +R E +L GR+PLQTLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNALKAGQKGVKVQVKGRIGGAARARKEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 A IDYG A A T YG +KV++ D + Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDVLKG 211 >gi|289423637|ref|ZP_06425436.1| ribosomal protein S3 [Peptostreptococcus anaerobius 653-L] gi|289155887|gb|EFD04553.1| ribosomal protein S3 [Peptostreptococcus anaerobius 653-L] Length = 265 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 105/223 (47%), Positives = 149/223 (66%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R+GV W+SRWFA E+GA + ED +R++L+ L AG+AKI IER Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANDKKEFGAFIKEDNVLRKHLKKELYSAGLAKIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ++ A+PG++IGK G IE ++K+L MT + L++ EV + +A L+A++ Sbjct: 61 SANKVKMDLHVAKPGVVIGKGGAGIEALKKELEKMTGKTVILNIIEVRNIDRDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQ +ERR+ FRRAMK+AV M+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR Sbjct: 121 IAQAIERRIAFRRAMKQAVGRTMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 + I+YG A A T YG GIKV++ + + + + E R Sbjct: 181 SDIEYGFAEANTTYGKIGIKVWICNGEILPGRNLSTEREEKRA 223 >gi|309789661|ref|ZP_07684242.1| ribosomal protein S3 [Oscillochloris trichoides DG6] gi|308228397|gb|EFO82044.1| ribosomal protein S3 [Oscillochloris trichoides DG6] Length = 242 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 150/235 (63%), Gaps = 9/235 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG W S+WFA Y LHEDL +R+ + L+ AGV++I IER+ Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RTYTDQLHEDLALRKLIAKELQNAGVSRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VY+A+PG++IGK+G +++ ++ L T +I L++ E+ +PE++A L+A+SI Sbjct: 60 ANKVEVTVYTAKPGIVIGKRGANVDLLKNNLEQKTGKKIKLNIQEIHQPELDAQLVAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ +RV ++RAMK+AVQ AMR GA GVKV SGRL GAE+SR + EGRVP TLRA Sbjct: 120 AEQITKRVSYKRAMKQAVQRAMRLGALGVKVRCSGRLGGAEMSRIQNESEGRVPRHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD--------SDSTIPAAEHRVVEKDS 227 IDY A T YG G+KV++ + D ++ P+A E+ + Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPDQLAKAAVEQQASAPSAPSERRERPA 234 >gi|312130543|ref|YP_003997883.1| ssu ribosomal protein s3p [Leadbetterella byssophila DSM 17132] gi|311907089|gb|ADQ17530.1| SSU ribosomal protein S3P [Leadbetterella byssophila DSM 17132] Length = 262 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG W S W+ G + L ED KIR+Y+ + + V++++IERT Sbjct: 1 MGQKVNPVGLRLGYIRGWESNWY-GGKTFSEKLVEDDKIRKYINARIPKGSVSRVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G++++K+R++L +T ++ +++ E+ +PEI+A L+ ++I Sbjct: 60 LKRITLTIHTARPGVVIGKAGSEVDKLREELKKLTKKDVQINIFEIKRPEIDAKLVGETI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL R+ FRRAMK+A+QSAMR GA G+K+ SGRL GAE++R+E Y EGR+PL TLRA Sbjct: 120 AQQLRARISFRRAMKQAIQSAMRVGAQGIKIKLSGRLGGAEMARSEQYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY + A T YG GIKV++ + D Sbjct: 180 DIDYAVSEALTVYGLIGIKVWIFKGEVYGKRD 211 >gi|171913919|ref|ZP_02929389.1| 30S ribosomal protein S3 [Verrucomicrobium spinosum DSM 4136] Length = 272 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRL V W S+W+A E+ LH DL IR YL+ L A +AKI+IER Sbjct: 1 MGQKVHPIGFRLAVTKDWRSKWYAPEKEFADFLHADLAIRSYLKGKLSSAALAKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 R+ +++ARPGL+IG+KG +IE + ++S M ++ + + E+ +PE++A L+A++ Sbjct: 61 WNLVRVTLHTARPGLVIGRKGQEIEVMSVEISKMCGGKQVKIDIIEIKQPELDAQLVAET 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A QLERR+ FRRAMKRAVQ+AM GADG+++ +GRL GA+++R E Y +G+VPLQ+LR Sbjct: 121 VATQLERRISFRRAMKRAVQTAMDMGADGIRIRCAGRLGGADIARAEQYRQGKVPLQSLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 IDYG A T YG G+K +++ + EV Sbjct: 181 IPIDYGFTEARTVYGIIGVKCWLNRKPEVEG 211 >gi|71276489|ref|ZP_00652764.1| ribosomal protein S3 [Xylella fastidiosa Dixon] gi|71900600|ref|ZP_00682727.1| ribosomal protein S3 [Xylella fastidiosa Ann-1] gi|170729706|ref|YP_001775139.1| 30S ribosomal protein S3 [Xylella fastidiosa M12] gi|226697778|sp|B0U5K5|RS3_XYLFM RecName: Full=30S ribosomal protein S3 gi|71162666|gb|EAO12393.1| ribosomal protein S3 [Xylella fastidiosa Dixon] gi|71729657|gb|EAO31761.1| ribosomal protein S3 [Xylella fastidiosa Ann-1] gi|167964499|gb|ACA11509.1| 30S ribosomal protein S3 [Xylella fastidiosa M12] Length = 239 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 154/208 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFAGYLAADLKVRQVLRKKMSQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ ARPG++IGK+G DIE +RK+LS++ +H++V EV KPE++A L+A+S+ Sbjct: 61 SNAACVSMHVARPGVVIGKRGEDIEMLRKQLSDIMGVSVHINVIEVRKPELDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 I YG + A T YG G+KV + D Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLIYHGDIF 208 >gi|260438210|ref|ZP_05792026.1| ribosomal protein S3 [Butyrivibrio crossotus DSM 2876] gi|292809402|gb|EFF68607.1| ribosomal protein S3 [Butyrivibrio crossotus DSM 2876] Length = 219 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 142/212 (66%), Gaps = 2/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A +++ L ED IR++++ L AG++KI IER Sbjct: 1 MGQKVNPHGMRVGVIKDWDSKWYAE-ADFSDNLVEDYNIRKFVKKELYSAGISKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +Y+A+PG++IGK G DIEK++ K+ +T ++ + + E+ +P+ +A L+A++I Sbjct: 60 SDRVKVFIYTAKPGVVIGKGGADIEKLKAKIQKLTTKKVSIDIKEIKRPDGDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A QLE RV FRRAMK + M+ G G+K SGRL GA+++RTE Y EG +PLQTLR Sbjct: 120 ALQLENRVSFRRAMKSVMSRTMKTAGVKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A I+YG A A+T YG G+KV++ + + Sbjct: 180 ADIEYGFAEADTTYGKVGVKVWIYKGEVLPTK 211 >gi|288818158|ref|YP_003432506.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6] gi|288787558|dbj|BAI69305.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6] gi|308751759|gb|ADO45242.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6] Length = 231 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 151/209 (72%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FR+GV WNS+WFA +Y LLHED+ I++Y++ AGV+K++IER Sbjct: 1 MGQKTHPIGFRIGVIKDWNSKWFASKRDYTKLLHEDINIKDYIKRRYASAGVSKVIIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 + ++ + +ARPG+IIG+KG ++E+++K + ++ ++ ++V+EV PE++A L+A+ Sbjct: 61 AEKVKVRILAARPGIIIGRKGAEVEQLKKDIESIAVGKDVTITVDEVRVPELDAQLVAEE 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A + GA GVKV GR+ GAEL+R E +L GR+PLQTLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAFKAGAKGVKVQVKGRIGGAELARAEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 A IDYG A A+T YG G+KV++ D + Sbjct: 181 ADIDYGYATAQTKYGVLGVKVWIYKGDIL 209 >gi|311748508|ref|ZP_07722293.1| ribosomal protein S3 [Algoriphagus sp. PR1] gi|126577024|gb|EAZ81272.1| ribosomal protein S3 [Algoriphagus sp. PR1] Length = 243 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 154/212 (72%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRLGV W+S W+ G ++ L+ED KIR+Y+ + + G+AK++IERT Sbjct: 1 MGQKINPIGFRLGVVKGWDSNWY-GGKDFAEKLYEDQKIRKYVLARIPKGGIAKVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G +++K++++L +T+ +I +++ E+ +PE++A L+ +SI Sbjct: 60 LKRITLTIHTARPGVVIGKGGAEVDKLKEELKKLTSKDIQINIFEIKRPELDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL+ R+ FRRAMK+A+ ++MR GA+G+K+ SGRL GAE++R+E Y EGR+PL T+RA Sbjct: 120 AQQLQARISFRRAMKQAIAASMRVGAEGIKIKLSGRLGGAEMARSEMYKEGRIPLHTMRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY + A T YG GIKV++ + D Sbjct: 180 DIDYALSEARTVYGIIGIKVWIFKGEVYGKRD 211 >gi|225574707|ref|ZP_03783317.1| hypothetical protein RUMHYD_02784 [Blautia hydrogenotrophica DSM 10507] gi|225038072|gb|EEG48318.1| hypothetical protein RUMHYD_02784 [Blautia hydrogenotrophica DSM 10507] Length = 219 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L AGV+KI IER Sbjct: 1 MGQKVNPHGLRVGVIKEWDSRWYAD-KDFADCLVEDYNIRKFLKKKLYTAGVSKIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-IHLSVNEVPKPEINATLIAQS 119 +II+Y+A+PG++IGK G++IEK++K+L N T+ + I + + EV +P+ +A L+A++ Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGSEIEKVKKELKNYTDKKFIIVDIKEVKRPDRDAQLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLR Sbjct: 120 IALQLENRISFRRAMKSTMSRTMKAGAQGIKTSVSGRLGGADMARTEFYSEGTIPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDYG A A+T YG G+K ++ + + Sbjct: 180 ADIDYGFAEADTTYGKVGVKAWIYNGEVLPTK 211 >gi|256831833|ref|YP_003160560.1| 30S ribosomal protein S3 [Jonesia denitrificans DSM 20603] gi|256685364|gb|ACV08257.1| ribosomal protein S3 [Jonesia denitrificans DSM 20603] Length = 271 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 144/210 (68%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK++P +RLG+ SRWFA G Y + ED+ IR+ + L++AG+AK+ Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVAIRKLMSEGLERAGIAKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA+R GA G++V SGRL GAE+SR+E Y EGRVPL Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSALRAGAKGIRVQYSGRLGGAEMSRSEFYREGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA+IDYG A T +G G+KV++ D Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGD 210 >gi|291460724|ref|ZP_06600114.1| ribosomal protein S3 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416683|gb|EFE90402.1| ribosomal protein S3 [Oribacterium sp. oral taxon 078 str. F0262] Length = 220 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 140/213 (65%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WNS+W+A + +L ED +IR +L+ L A V++I IER Sbjct: 1 MGQKVNPHGMRVGVIKDWNSKWYADKKSFSTILIEDHRIRSFLKKRLYSANVSRIDIERA 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 R+I+Y+A+PG +IGK G +IEK+RK + +T I++ + E+ +P+ +A L+A+S Sbjct: 61 AEDKVRVIIYTAKPGFVIGKGGAEIEKLRKDVQKLTGKSIYIDIKEIKRPDRDAQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQ LE R+ FRRA+K+A+ M+ GA G+K GRL GA+++R E Y EG +PLQTLR Sbjct: 121 IAQSLENRISFRRALKQAMSRTMKSGALGIKAAVGGRLGGADIARREFYSEGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 A IDYG A A T YG G+KV++ + + Sbjct: 181 ADIDYGFAEAATTYGRLGVKVWIYKGEVLPAKK 213 >gi|219849881|ref|YP_002464314.1| 30S ribosomal protein S3 [Chloroflexus aggregans DSM 9485] gi|254764521|sp|B8G6R9|RS3_CHLAD RecName: Full=30S ribosomal protein S3 gi|219544140|gb|ACL25878.1| ribosomal protein S3 [Chloroflexus aggregans DSM 9485] Length = 241 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 103/229 (44%), Positives = 150/229 (65%), Gaps = 8/229 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG W S+WFA G Y LHED+++R+ + L+ AGV++I IER+ Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAEGETYTKQLHEDIELRKLISKELQSAGVSRIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I VY+A+PG++IGK+GT+++ ++ L T +I L++ E+ +PE++A L+A+SI Sbjct: 61 ANKIEISVYTAKPGIVIGKRGTNVDTLKSALEKKTGKKIKLNIKEISQPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R EGRVP TLRA Sbjct: 121 GEQITKRVSYKRAMKQAVQRAMRLGAQGVKIRCSGRLAGAEMARVHEEAEGRVPRHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS--------DSDSTIPAAEHR 221 IDY A T YG G+KV++ D + +T PA+E R Sbjct: 181 DIDYAQVHAHTTYGRIGVKVWIYKGDVFPNQSAKASVEQPATAPASERR 229 >gi|163815981|ref|ZP_02207351.1| hypothetical protein COPEUT_02161 [Coprococcus eutactus ATCC 27759] gi|158448791|gb|EDP25786.1| hypothetical protein COPEUT_02161 [Coprococcus eutactus ATCC 27759] Length = 222 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 141/213 (66%), Gaps = 2/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE--YGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+NP R+G+ W+S W+A + L ED +R+YL+ L ++ ++KI IE Sbjct: 1 MGQKVNPHGLRVGIIKDWDSNWYADKRNDEFAKNLAEDQILRKYLKTTLYKSNISKIEIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R+ KN +I++Y+A+PG++IGK G IEKI+ +T+ ++ + V E+ +P+ +A L+A+ Sbjct: 61 RSAKNVKIVLYTAKPGVVIGKGGAGIEKIKADAQKLTDKKLFIDVKEIKRPDADAQLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE R+ FR+AMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTL Sbjct: 121 NIAAQLENRIAFRKAMKSCMGRTMKSGAQGIKCACSGRLGGADMARTEFYSEGTIPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 RA IDYG A A+T YG G+K ++ + + Sbjct: 181 RADIDYGFAEADTTYGKVGVKTWIYHGEVLPTK 213 >gi|289450090|ref|YP_003475778.1| 30S ribosomal protein S3 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184637|gb|ADC91062.1| ribosomal protein S3 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 222 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 138/218 (63%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR+GV WN+RW+A ++ L +D IR++++ AGV+ I IER Sbjct: 1 MGQKVNPNGFRVGVIRDWNTRWYADKKDFSRYLVQDNSIRKFVKKECYVAGVSSIEIERK 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I +++A+PG+IIG KG IE ++KKL ++V EV + +A L+A++ Sbjct: 61 GDDRTEITIHTAKPGIIIGAKGAGIEALKKKLLAEFGINFFINVLEVKGVDTDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLE+R+ FRRAMK+A+ AM+ GA G+K SGR+ GAE++RTE Y +G +PLQTLR Sbjct: 121 IAAQLEKRISFRRAMKQAMGRAMKTGAKGIKTQVSGRIGGAEIARTEHYHDGTIPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A I YG A A+T YG G+KV++ + ++ Sbjct: 181 ADIKYGFAEADTTYGRLGVKVWIYKGEVLAAKKQETKK 218 >gi|83816111|ref|YP_445173.1| 30S ribosomal protein S3 [Salinibacter ruber DSM 13855] gi|294507057|ref|YP_003571115.1| 30S ribosomal protein S3 [Salinibacter ruber M8] gi|123739751|sp|Q2S3Q8|RS3_SALRD RecName: Full=30S ribosomal protein S3 gi|83757505|gb|ABC45618.1| ribosomal protein S3 [Salinibacter ruber DSM 13855] gi|294343385|emb|CBH24163.1| 30S ribosomal protein S3 [Salinibacter ruber M8] Length = 236 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 160/227 (70%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT Sbjct: 1 MGQKTHPIGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + ++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I Sbjct: 60 PERVILTLHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLE R+ FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA Sbjct: 120 VQQLEGRISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226 ID+ A T YG+ G+KV++ + + S A+ R +++ Sbjct: 180 DIDFAQETALTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 226 >gi|253581386|ref|ZP_04858612.1| ribosomal protein S3 [Fusobacterium varium ATCC 27725] gi|251836750|gb|EES65284.1| ribosomal protein S3 [Fusobacterium varium ATCC 27725] Length = 218 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 145/218 (66%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A EY HED+KIRE ++ + AG++K+ IERT Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIRELIKKNYFHAGISKVKIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++ Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVLLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+ +A+ AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR Sbjct: 121 IATSIEKRVAYKRAVSQAIMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY A A T YG+ GIKV+V + + A Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218 >gi|15837760|ref|NP_298448.1| 30S ribosomal protein S3 [Xylella fastidiosa 9a5c] gi|27734539|sp|Q9PE70|RS3_XYLFA RecName: Full=30S ribosomal protein S3 gi|9106122|gb|AAF83968.1|AE003950_18 30S ribosomal protein S3 [Xylella fastidiosa 9a5c] Length = 239 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 154/208 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFAGYLAADLKVRQVLRKKMSQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ ARPG++IGK+G DIE +RK++S++ +H++V EV KPE++A L+A+S+ Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIEMLRKQVSDIMGVSVHINVIEVRKPELDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +AMR GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 I YG + A T YG G+KV + D Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLIYHGDIF 208 >gi|33241155|ref|NP_876097.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|61215704|sp|Q7V9W8|RS3_PROMA RecName: Full=30S ribosomal protein S3 gi|33238685|gb|AAQ00750.1| Ribosomal protein S3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 243 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 139/230 (60%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR ++Q AG++ +LI R Sbjct: 1 MGHKIHPNGLRLGITQEHRSRWYASSKTYPLLLQEDDRIRVFIQKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 + + +ARPG+I+G++G+ IE++R + ++ ++V E+ + + +A L+A Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRSRQVRINVVEIERVDADAHLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY A T YG GIKV+V + +S + +P A+ R + Sbjct: 181 LRAEIDYANKTANTTYGVLGIKVWVFKGEVLSKEEQPLPVGASPRRKGNR 230 >gi|124024001|ref|YP_001018308.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9303] gi|152060893|sp|A2CC33|RS3_PROM3 RecName: Full=30S ribosomal protein S3 gi|123964287|gb|ABM79043.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9303] Length = 242 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 95/230 (41%), Positives = 141/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R Sbjct: 1 MGNKIHPTGLRLGITQEHRSRWYATSKMYPILLQEDDRIRRFIHKKYGAAGISDVLIARK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G++G+ IE++R +K + ++ ++V EV + + +A L+A Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRTGIQKTIGDHSRQVRINVVEVERVDADAFLLA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R E EGRVPL T Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARNEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225 LRA IDY T VA T YG GIKV++ + + D ++P A+ R + Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWIFKGEVLGDEAQSMPVGASPRRRGNR 230 >gi|255348899|ref|ZP_05380906.1| 30S ribosomal protein S3 [Chlamydia trachomatis 70] gi|255503439|ref|ZP_05381829.1| 30S ribosomal protein S3 [Chlamydia trachomatis 70s] gi|255507118|ref|ZP_05382757.1| 30S ribosomal protein S3 [Chlamydia trachomatis D(s)2923] gi|289525567|emb|CBJ15045.1| SSU ribosomal protein S3P [Chlamydia trachomatis Sweden2] gi|296435127|gb|ADH17305.1| 30S ribosomal protein S3 [Chlamydia trachomatis E/150] gi|296438847|gb|ADH21000.1| 30S ribosomal protein S3 [Chlamydia trachomatis E/11023] Length = 219 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 102/208 (49%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK P+ FR V W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|182412045|ref|YP_001817111.1| ribosomal protein S3 [Opitutus terrae PB90-1] gi|226697739|sp|B1ZNE2|RS3_OPITP RecName: Full=30S ribosomal protein S3 gi|177839259|gb|ACB73511.1| ribosomal protein S3 [Opitutus terrae PB90-1] Length = 210 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 105/206 (50%), Positives = 144/206 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP FRL V W SRW+A ++ LL ED IRE L LKQA V +I IER Sbjct: 1 MGQKTNPTGFRLAVRRNWQSRWYATKKDFPKLLEEDQIIREKLMEKLKQASVPRIFIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +Y+ARPG++IG+KG +IEKI+++L+ +T EI L + EV KPEI A L+A+++ Sbjct: 61 SNRVRVKIYTARPGIVIGRKGQEIEKIKEELAKLTGKEILLDIQEVKKPEIEAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV+ AM GA+G+++ SGRL GA+++R E +GRVPL TLR Sbjct: 121 ALQLERRIAFRRAMKKAVEMAMTLGAEGIRIQCSGRLGGADIARREWQRKGRVPLHTLRE 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 +IDYG + A T YG G+K ++ ++ Sbjct: 181 NIDYGFSEAHTVYGKIGVKCWICKKE 206 >gi|257470832|ref|ZP_05634922.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185] gi|317065036|ref|ZP_07929521.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185] gi|313690712|gb|EFS27547.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185] Length = 218 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 145/218 (66%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A EY HED+KIRE ++ + AG++K+ IERT Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIRELIKKNYFHAGISKVKIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++ Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVSLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+ +A+ AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR Sbjct: 121 IATSIEKRVAYKRAVSQAIMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY A A T YG+ GIKV+V + + A Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218 >gi|326692231|ref|ZP_08229236.1| 30S ribosomal protein S3 [Leuconostoc argentinum KCTC 3773] Length = 223 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 152/223 (68%), Gaps = 8/223 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V ++ IER+ Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRVEIERS 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K + +++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDVSIHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRSKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARVEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 VPL TLRA IDY A TAYG+ GIK ++ D + ++ Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDVLPQKKNSK 223 >gi|158520731|ref|YP_001528601.1| ribosomal protein S3 [Desulfococcus oleovorans Hxd3] gi|226697698|sp|A8ZV63|RS3_DESOH RecName: Full=30S ribosomal protein S3 gi|158509557|gb|ABW66524.1| ribosomal protein S3 [Desulfococcus oleovorans Hxd3] Length = 216 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 105/216 (48%), Positives = 147/216 (68%), Gaps = 3/216 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ TW SRW+A EY + ED K+RE+++ L AG+AK+ IER+ Sbjct: 1 MGQKVNPEGLRLGIVKTWQSRWYAD-KEYADFILEDFKLREFVKKKLHHAGIAKVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEINATLIAQ 118 R+ +++ARPG++IGKKG +IE+++ ++ + ++ + + EV KPE A L+A+ Sbjct: 60 LNRIRLRIFAARPGIVIGKKGNEIEQLKNEIRQKVVAGKDLAIDIQEVKKPETVAQLVAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A QLERRV FRRAMKR V SAMRFG G+K+I SGRL GAE++R E Y EGRVPL TL Sbjct: 120 NVAGQLERRVAFRRAMKRGVSSAMRFGVKGIKIICSGRLGGAEMARREWYREGRVPLHTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 RA +DYG A T YG G+KV++ + + D Sbjct: 180 RADVDYGFVEASTTYGRIGVKVFIFKGEVLKDERKK 215 >gi|196228462|ref|ZP_03127329.1| ribosomal protein S3 [Chthoniobacter flavus Ellin428] gi|196227865|gb|EDY22368.1| ribosomal protein S3 [Chthoniobacter flavus Ellin428] Length = 251 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 151/223 (67%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI +RL VN W SRW+A E L+ DLKIR Y++ L+ A V+KI+IER Sbjct: 1 MGQKVNPIGYRLAVNRDWRSRWYASPKELPDFLNSDLKIRRYVKDKLRLAAVSKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 + R+ +++ARPG++IG+KGT+IE + K++ ++N + + + E+ PE++A L+A++ Sbjct: 61 WNSIRVTIFTARPGIVIGRKGTEIENMTKEIERLSNGKSVKIDIQEIKTPELDAQLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A Q+ERR+ FRRAMK+++Q M FGA G+K+ +GRL GAE+SR E Y EG++PL TLR Sbjct: 121 VALQIERRISFRRAMKKSIQQTMEFGAQGIKLRCAGRLGGAEISRAEWYREGKIPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDYG A A T YG G+K ++ + ++ PA + Sbjct: 181 QPIDYGFAEANTVYGKIGVKCWLCKPE---GANEPQPADKEEK 220 >gi|282878765|ref|ZP_06287533.1| ribosomal protein S3 [Prevotella buccalis ATCC 35310] gi|281299156|gb|EFA91557.1| ribosomal protein S3 [Prevotella buccalis ATCC 35310] Length = 243 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 102/221 (46%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A +++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDRKIRKYLNERLAKASLSRIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ N EI +++ EV KPE++A ++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFNKEIQINIFEVKKPELDANIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV SGRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKVQISGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T G GIKV++ + + T + + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGKQELTPNFTQDK 220 >gi|218779756|ref|YP_002431074.1| ribosomal protein S3 [Desulfatibacillum alkenivorans AK-01] gi|226697696|sp|B8FES9|RS3_DESAA RecName: Full=30S ribosomal protein S3 gi|218761140|gb|ACL03606.1| ribosomal protein S3 [Desulfatibacillum alkenivorans AK-01] Length = 219 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 113/219 (51%), Positives = 164/219 (74%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ TW+SRW+A +Y + ED K+R++L+ L AG++KI IER+ Sbjct: 1 MGQKVNPIGLRLGIVKTWDSRWYAEKGKYAEFIREDFKLRKFLKKKLHHAGISKIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + R+ V++ARPG++IGKKG++IE+++K+L M ++E+ + + EV KPE++A L+A+++ Sbjct: 61 GRRVRLRVFAARPGIVIGKKGSEIEQLKKELEKMVDNEVLIDIQEVRKPELDAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV FRRAMKR + SAMRFGA GVK++A+GRL GAE++R E Y EGR+PL TLRA Sbjct: 121 AMQLERRVAFRRAMKRGISSAMRFGAQGVKIMAAGRLGGAEMARREWYREGRMPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAA 218 IDYG A T YG G+KV++ + + SD+++ P A Sbjct: 181 DIDYGYTEANTTYGVIGVKVFIFKGEILKSDTEAANPTA 219 >gi|89898714|ref|YP_515824.1| 30S ribosomal protein S3 [Chlamydophila felis Fe/C-56] gi|123735902|sp|Q252V9|RS3_CHLFF RecName: Full=30S ribosomal protein S3 gi|89332086|dbj|BAE81679.1| 30S ribosomal protein S3 [Chlamydophila felis Fe/C-56] Length = 223 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 101/207 (48%), Positives = 142/207 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREHLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMEAGAIGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY TA AET YG G+KV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEK 207 >gi|325280962|ref|YP_004253504.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712] gi|324312771|gb|ADY33324.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712] Length = 244 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 105/218 (48%), Positives = 151/218 (69%), Gaps = 2/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G YG L ED KIR+YL L +AG+AKI+IERT Sbjct: 1 MGQKCNPISNRLGIIRGWDSNWF-GGKNYGDKLVEDYKIRKYLNARLAKAGIAKIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A ++ +I Sbjct: 60 LKLITITINTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAVIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV +RRA+K A+ S MR GA+G+K++ SGRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQLEGRVAYRRAIKMAIASTMRMGAEGIKILISGRLNGAEMARAEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 ID+ A A T YG GIKV++ + EV +P + Sbjct: 180 DIDFAQAEALTTYGLLGIKVWIC-KGEVYGKRELVPNS 216 >gi|237802951|ref|YP_002888145.1| 30S ribosomal protein S3 [Chlamydia trachomatis B/Jali20/OT] gi|231274185|emb|CAX10979.1| SSU ribosomal protein S3P [Chlamydia trachomatis B/Jali20/OT] Length = 224 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 102/208 (49%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR + W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPIGFRTAITKKWRSLWYGNNQEFGKFLVEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|269837072|ref|YP_003319300.1| 30S ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745] gi|269786335|gb|ACZ38478.1| ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745] Length = 224 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 1/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG+ W S+W+A Y LHEDL IR + L +AG+++I IER Sbjct: 1 MGRKVHPIGFRLGIVHDWESKWYAE-RNYTEQLHEDLTIRRLINAELTRAGISRIEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++++PG++IGK+G ++E+IR+ + ++HL + E+ PE++A LIA+SI Sbjct: 60 ANRIEVTIHTSKPGIVIGKQGANVERIRQLIEQQVGKKVHLKIEEIKDPELDARLIAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ RRV FRRAMK A AMR GA GVK+ SGRL GAE++RT + GRVPL T+RA Sbjct: 120 AEQISRRVSFRRAMKHAATQAMRKGAKGVKIRLSGRLGGAEMARTVTEMMGRVPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 ID+ A T YG G+KV+V D + ++ S E Sbjct: 180 DIDFAVVHAHTTYGRIGVKVWVYRGDVMPEARSGAELPE 218 >gi|297567278|ref|YP_003686250.1| 30S ribosomal protein S3 [Meiothermus silvanus DSM 9946] gi|296851727|gb|ADH64742.1| ribosomal protein S3 [Meiothermus silvanus DSM 9946] Length = 250 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 141/210 (67%), Gaps = 1/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP+ RLG+ W SRW+A +Y LL +D +IR ++ L AG+A+I IER Sbjct: 1 MGNKINPVGLRLGITREWESRWYAGKKDYSKLLIQDRQIRSLIEKELAPAGLARIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N + VY+A+PG++IG+ G I+++R+ + + L+V EV P ++A L+AQ Sbjct: 61 ADNVAVTVYAAKPGVVIGRGGETIKRLRETLQNKFPGKTVALNVQEVGNPNLSAPLVAQR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+Q+ERR RRA+K+AVQ GA G K++ SGR+ GAE +RTE EGRVPL TLR Sbjct: 121 VAEQIERRFAVRRAIKQAVQRIRESGALGAKIVVSGRIGGAEQARTEWAAEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 A++DYGTA AET YGS G+KVYV + +++ Sbjct: 181 ANLDYGTARAETTYGSLGVKVYVFMGEQIG 210 >gi|282891944|ref|ZP_06300423.1| hypothetical protein pah_c200o108 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498204|gb|EFB40544.1| hypothetical protein pah_c200o108 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 216 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 137/216 (63%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL N + S+WFA E+G + ED IREYL G ++I I R Sbjct: 1 MGQKANPIGLRLIRNRKFRSKWFANKHEFGQNVIEDHMIREYLMKKPACVGTSQIRICRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + +ARPGL+IGKKG +I+ ++ +L +T E+ + V E+ +P+++A ++A I Sbjct: 61 SDKIEITICTARPGLVIGKKGAEIDALKSELFKLTGKEVWIEVEEIKRPDLDAKIVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR+ FRRAMK+A+QSA GA G+KV SGRL GAE++RTE Y EG PL TLRA Sbjct: 121 AKQLERRIAFRRAMKKAMQSATDAGALGIKVQVSGRLGGAEIARTEWYKEGSTPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 ID+ AET YGS G+KV++ ++ + Sbjct: 181 DIDFAYGRAETTYGSIGVKVWIYRGEDTQPTRQPTE 216 >gi|261880876|ref|ZP_06007303.1| 30S ribosomal protein S3 [Prevotella bergensis DSM 17361] gi|270332383|gb|EFA43169.1| 30S ribosomal protein S3 [Prevotella bergensis DSM 17361] Length = 241 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 150/220 (68%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L++A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDKKIRKYLNKRLEKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D+++++++L N+ +I +++ EV KPE++AT++A++I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDRLKEELKNLFKKDIQINIFEVKKPELDATIVAKNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E + +RRA+K AVQ+ MR GA+G+KV SGRLNGAE++RTE + EGR PL T RA Sbjct: 120 ASQIEHMMAYRRAIKMAVQNTMRAGAEGIKVQISGRLNGAEMARTEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A T G GIKV++ + D + + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGKRDLSPNFTQE 219 >gi|237804873|ref|YP_002889027.1| 30S ribosomal protein S3 [Chlamydia trachomatis B/TZ1A828/OT] gi|255311340|ref|ZP_05353910.1| 30S ribosomal protein S3 [Chlamydia trachomatis 6276] gi|255317641|ref|ZP_05358887.1| 30S ribosomal protein S3 [Chlamydia trachomatis 6276s] gi|231273173|emb|CAX10086.1| SSU ribosomal protein S3P [Chlamydia trachomatis B/TZ1A828/OT] gi|296436055|gb|ADH18229.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/9768] gi|296436983|gb|ADH19153.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/11222] gi|296437916|gb|ADH20077.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/11074] gi|297140416|gb|ADH97174.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/9301] Length = 224 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 103/208 (49%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|225158906|ref|ZP_03725220.1| ribosomal protein S3 [Opitutaceae bacterium TAV2] gi|224802524|gb|EEG20782.1| ribosomal protein S3 [Opitutaceae bacterium TAV2] Length = 212 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 147/207 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP+ FRL V W SRW+A ++ LLHED IR L LKQA V +I IER Sbjct: 1 MGQKTNPVGFRLAVRRNWQSRWYATKKDFAKLLHEDQIIRGKLMEKLKQASVPRIFIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG +IEKI+++++ +T EI L + EV KPEI A L+A+++ Sbjct: 61 SNRVRVKIFTARPGIVIGRKGQEIEKIKEEIAKLTGREILLDIQEVKKPEIEAQLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AV+ AM GA+G+++ SGRL G++++R E +GRVPL TLR Sbjct: 121 ALQLERRIAFRRAMKKAVEIAMTLGAEGIRIQCSGRLGGSDIARREWQRKGRVPLHTLRE 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 +IDYG + A+T YG G+K ++ +DE Sbjct: 181 NIDYGFSEAQTVYGKIGVKCWICKKDE 207 >gi|325104862|ref|YP_004274516.1| SSU ribosomal protein S3P [Pedobacter saltans DSM 12145] gi|324973710|gb|ADY52694.1| SSU ribosomal protein S3P [Pedobacter saltans DSM 12145] Length = 257 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G+ Y L ED KIR+YL + + GV+K++IERT Sbjct: 1 MGQKANPIGNRLGIIRGWDSNWY-GGNNYSDKLVEDEKIRKYLSVRVAKGGVSKVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IGK G++++KI+++L +T ++ +++ E+ +PE++A L+A + Sbjct: 60 LKRITVTIHTARPGIVIGKGGSEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVADGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRAMK ++ S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA Sbjct: 120 AKQLEARISFRRAMKTSIASTMRMGAEGIKIMCSGRLGGAEMARSEQYKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T YG GIKV++ + D Sbjct: 180 DIDYALGEALTTYGKIGIKVWICKGEVYGKRD 211 >gi|257463967|ref|ZP_05628352.1| SSU ribosomal protein S3P [Fusobacterium sp. D12] gi|317061490|ref|ZP_07925975.1| SSU ribosomal protein S3P [Fusobacterium sp. D12] gi|313687166|gb|EFS24001.1| SSU ribosomal protein S3P [Fusobacterium sp. D12] Length = 218 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 95/218 (43%), Positives = 146/218 (66%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A EY HED+K+RE+++ AGV+K+ +ERT Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDMKVREFVKKAYYHAGVSKVKLERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 +++ + + G+IIG+KG +IE +R KL MT ++ + V EV + +A L+A+S Sbjct: 61 SPSQITVLISAGKAGIIIGRKGAEIESLRAKLEKMTGKKVTVKVQEVKEFNKDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+E+R+ +++AM +A+ AM+ GA G+KV+ SGRLNGAE++R+E +EG+VPL TLR Sbjct: 121 IATQIEKRIAYKKAMTQAIGRAMKAGAKGIKVMVSGRLNGAEIARSEWAVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY A A T YG+ GIKV+V + + + A Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTAKEGGEA 218 >gi|71902239|ref|ZP_00684246.1| ribosomal protein S3 [Xylella fastidiosa Ann-1] gi|71728013|gb|EAO30227.1| ribosomal protein S3 [Xylella fastidiosa Ann-1] Length = 239 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 153/208 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFARYLAADLKVRQVLRKKMSQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ ARPG++IGK+G DI +RK++S++ +H++V EV KPE++A L+A+S+ Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIGMLRKQVSDIMGVPVHINVIEVRKPELDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 I YG + A T YG G+KV + D Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLMYHGDIF 208 >gi|300812370|ref|ZP_07092805.1| ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496675|gb|EFK31762.1| ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 223 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP+++A L+A SI Sbjct: 60 ANRVNITIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLDAKLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRTGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV+++ + + + PA + +K Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223 >gi|15605251|ref|NP_220037.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/UW-3/CX] gi|7388191|sp|O84527|RS3_CHLTR RecName: Full=30S ribosomal protein S3 gi|3328959|gb|AAC68123.1| S3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|297748652|gb|ADI51198.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-EC] gi|297749532|gb|ADI52210.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-LC] Length = 224 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 103/208 (49%), Positives = 142/208 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T+ ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTDKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|166154737|ref|YP_001654855.1| 30S ribosomal protein S3 [Chlamydia trachomatis 434/Bu] gi|166155612|ref|YP_001653867.1| 30S ribosomal protein S3 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336011|ref|ZP_07224255.1| 30S ribosomal protein S3 [Chlamydia trachomatis L2tet1] gi|226697681|sp|B0B896|RS3_CHLT2 RecName: Full=30S ribosomal protein S3 gi|226697682|sp|B0BCG1|RS3_CHLTB RecName: Full=30S ribosomal protein S3 gi|165930725|emb|CAP04222.1| SSU ribosomal protein S3P [Chlamydia trachomatis 434/Bu] gi|165931600|emb|CAP07176.1| SSU ribosomal protein S3P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 224 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 102/208 (49%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK P+ FR V W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|124003668|ref|ZP_01688516.1| ribosomal protein S3 [Microscilla marina ATCC 23134] gi|123990723|gb|EAY30190.1| ribosomal protein S3 [Microscilla marina ATCC 23134] Length = 238 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 150/212 (70%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG+ W S W+ G Y L ED KIR+Y+ + + G+++I+IERT Sbjct: 1 MGQKVNPNGLRLGIIKGWESNWY-GGKNYSNKLLEDEKIRKYIHARIPKGGISRIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + +++ARPG++IG+ G +++KI+++L +T+ ++ +++ EV +PE++A L+ +SI Sbjct: 60 LKRITLTIHTARPGVVIGRGGAEVDKIKEELKKLTSKDVQINIFEVKRPELDAKLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE R+ +RRAMK+A+ +AMR GA G+K+ A+GRL GAE++R+E Y EGR+PL TLRA Sbjct: 120 AQQLEARISYRRAMKQAIAAAMRVGAQGIKIKAAGRLGGAEMARSEQYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY + A T YG GIKV++ ++ D Sbjct: 180 EIDYAISEANTVYGKIGIKVWIFKKEVYGKPD 211 >gi|257453265|ref|ZP_05618564.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R] gi|257467140|ref|ZP_05631451.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563] gi|315918271|ref|ZP_07914511.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563] gi|317059799|ref|ZP_07924284.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R] gi|313685475|gb|EFS22310.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R] gi|313692146|gb|EFS28981.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563] Length = 218 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 96/218 (44%), Positives = 146/218 (66%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A EY HED+K+RE+++ AGV+K+ +ERT Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKVREFVKKAYYHAGVSKVKLERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 +++ + + G+IIG+KG +IE +R KL MT +I + V EV + +A L+A+S Sbjct: 61 SPSQITVLISAGKAGIIIGRKGAEIESLRAKLEKMTGKKITVKVQEVKEFNKDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+E+R+ +++AM +A+ AM+ GA G+KV+ SGRLNGAE++R+E +EG+VPL TLR Sbjct: 121 IATQIEKRIAYKKAMTQAIGRAMKAGAKGIKVMVSGRLNGAEIARSEWAVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY A A T YG+ GIKV+V + + + A Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTAKEGGEA 218 >gi|113476573|ref|YP_722634.1| 30S ribosomal protein S3 [Trichodesmium erythraeum IMS101] gi|122964705|sp|Q110B3|RS3_TRIEI RecName: Full=30S ribosomal protein S3 gi|110167621|gb|ABG52161.1| SSU ribosomal protein S3P [Trichodesmium erythraeum IMS101] Length = 242 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG+ SRW+A Y L ED KIR+Y++ L AG+++I +ER Sbjct: 1 MGQKIHPTGFRLGITQEHRSRWYADPKNYPDTLQEDHKIRQYVKATLANAGISQIRVERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + + V +ARPG+++G+ G I+ +R L + +N +I ++V EV K + +A LI + Sbjct: 61 AEQIDLEVRTARPGVVVGRGGAGIDSLRVGLQKLLGSNRQIRINVVEVTKVDTDAMLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLE+RV FRR +++A+ A + G +G+K+ SGR+NGAE++RTE EG VPL TL Sbjct: 121 YIAQQLEKRVSFRRVVRQAITRAQKAGVEGIKIQVSGRVNGAEIARTEVTREGSVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 RA+IDY A+T YG GIK++V + + + A Sbjct: 181 RANIDYAYCTAKTIYGILGIKIWVFKGEIIPGQEEIANAK 220 >gi|281358719|ref|ZP_06245196.1| ribosomal protein S3 [Victivallis vadensis ATCC BAA-548] gi|281314845|gb|EFA98881.1| ribosomal protein S3 [Victivallis vadensis ATCC BAA-548] Length = 235 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 106/233 (45%), Positives = 154/233 (66%), Gaps = 6/233 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE-----YGALLHEDLKIREYLQCHLKQAGVAKI 55 MGQK+NPI R + W SRWFA +G L EDL IR++++ QA +A+I Sbjct: 1 MGQKVNPIGLRTALTKNWESRWFADKKSGGKTLFGEWLQEDLAIRKFIKEKFAQAAIARI 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINAT 114 IER R+ + SARPGL+IGKKG ++E ++ +++ +T E+ + + EV + E NA Sbjct: 61 QIERFANRVRVTICSARPGLLIGKKGAELESMKAQVAKLTAGKEVFIEIAEVRRAETNAQ 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 L++++IAQQLERR+ FRRAMKRA+Q+AM GADG+K+ +GRL GAEL+R E Y EGRVP Sbjct: 121 LVSENIAQQLERRIGFRRAMKRAIQTAMDMGADGIKINCAGRLGGAELAREEQYKEGRVP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 L TL+A+IDYG A T G+ G+KV++ +D + D + A + +V + + Sbjct: 181 LHTLKANIDYGFTEANTTAGTIGVKVWICHKDSTEEQDYAVNAKKSKVQKGSA 233 >gi|258648153|ref|ZP_05735622.1| ribosomal protein S3 [Prevotella tannerae ATCC 51259] gi|260852034|gb|EEX71903.1| ribosomal protein S3 [Prevotella tannerae ATCC 51259] Length = 243 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S W+ GS YG L ED K+R YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWY-GGSNYGDTLLEDSKLRRYLNARLAKASVSRIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + ++RPG+IIGK G +++K++++L +T+ ++ +++ EV +P+++A ++ QSI Sbjct: 60 LKLITITICTSRPGIIIGKGGQEVDKLKEELHKITDKDVQINIFEVKRPDLDANIVGQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA K A+Q+AMR GA+G+KV SGRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQIEGKIAYRRAAKMAIQNAMRMGAEGIKVQVSGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T G GIKV++ + D R Sbjct: 180 DIDYCQTTALTKVGLIGIKVWICRGEVYGKKDLAPNFTPER 220 >gi|257456898|ref|ZP_05622079.1| ribosomal protein S3 [Treponema vincentii ATCC 35580] gi|257445607|gb|EEV20669.1| ribosomal protein S3 [Treponema vincentii ATCC 35580] Length = 246 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 108/228 (47%), Positives = 144/228 (63%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NPI RLG+N TW+SRW+A EY LLHEDLKIR LQ K A VA I I Sbjct: 1 MGQKVNPIGLRLGINKTWSSRWYASPREYADLLHEDLKIRAMLQTLPECKNADVADIEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++++ARPG+IIG KG +IEKI + N ++ + + EV + E+NA+L+AQ Sbjct: 61 RHPQRVTIVIHTARPGVIIGTKGANIEKIGAIIQKELNKKVQIKIKEVKRAELNASLVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FR+A+K+ S M+ GA G+K+ SGRL GAE+SRTE EGR+PL TL Sbjct: 121 NVARQLMGRASFRKALKQGCFSTMKAGAQGIKIRVSGRLGGAEMSRTEEMKEGRIPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA IDYG A A T YG G+KV++ S + K+ Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWLYSGMMYSSDQKDDAGLLLKKQRKE 228 >gi|297621714|ref|YP_003709851.1| 30S ribosomal protein S3 [Waddlia chondrophila WSU 86-1044] gi|297377015|gb|ADI38845.1| 30S ribosomal protein S3 [Waddlia chondrophila WSU 86-1044] Length = 215 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 100/214 (46%), Positives = 145/214 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRL W S+WFA E+G L ED +IREYL + G +KI I R Sbjct: 1 MGQKVNPIGFRLVRKKDWRSKWFANKQEFGDFLVEDRRIREYLLKKSQLVGTSKIKIRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + + +ARPGL+IGKKG +I+ ++ +L +T ++ + V E+ +P+ +A ++A I Sbjct: 61 SEKIEVTIVTARPGLVIGKKGAEIDALKTELYKLTGKQVWVEVEEIKRPDADAQVVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLERR+ FRRA+K+A+QS++ GA G+KV SGRL GAE++RTE Y EG +PL TLRA Sbjct: 121 AKQLERRIPFRRALKKAIQSSLDAGAVGIKVQTSGRLGGAEIARTEWYKEGSIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 +IDY T+ AET YG+ G+KV+++ D+ Sbjct: 181 NIDYATSRAETTYGTIGVKVWINRGDDNYSKKEN 214 >gi|22297631|ref|NP_680878.1| 30S ribosomal protein S3 [Thermosynechococcus elongatus BP-1] gi|27734497|sp|P59187|RS3_THEEB RecName: Full=30S ribosomal protein S3 gi|22293808|dbj|BAC07640.1| 30S ribosomal protein S3 [Thermosynechococcus elongatus BP-1] Length = 238 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 102/227 (44%), Positives = 143/227 (62%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ SRW+A Y LL ED +IR ++ L AG+A++ IER Sbjct: 1 MGQKIHPIGFRLGITQDHRSRWYADSDRYPELLQEDHRIRTFINQQLANAGIAEVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + + +ARPG+++GK G IE++RK+L M N I ++V EV + + A+L+A+ Sbjct: 61 ADQVELQIRTARPGVVVGKGGQGIEELRKQLRQMLPANRTIKVNVVEVNRVDAEASLLAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRRA+++A+Q A R G +G+KV +GRLNGAE++RTE EGRVPL TL Sbjct: 121 YITQQLERRVAFRRAVRQAIQRAQRAGIEGIKVQVAGRLNGAEIARTEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA IDY A T YG G+KV++ + + +P R + Sbjct: 181 RADIDYAYRTARTIYGILGVKVWIFKGEVLPGQTEAVPREATRRSPQ 227 >gi|291298716|ref|YP_003509994.1| 30S ribosomal protein S3 [Stackebrandtia nassauensis DSM 44728] gi|290567936|gb|ADD40901.1| ribosomal protein S3 [Stackebrandtia nassauensis DSM 44728] Length = 265 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 98/208 (47%), Positives = 149/208 (71%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P +RLG++ W SRW+A Y + ED+KIR+ + +++AG+A++ IERT Sbjct: 1 MGQKIHPHGYRLGISSGWTSRWYAD-KSYAEYVGEDVKIRKLMSQGMERAGIAEVDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG + +++R +L +T ++ ++ EV PE NA L+AQ+I Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRLRTRLEKLTGKQVQFNIIEVKNPESNAQLVAQAI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A+QL RV FRRAM++++QSA+R G+KV SGRL GAE+SR+E YLEG+VPL TLR Sbjct: 120 AEQLASRVNFRRAMRKSIQSALRNPTVKGIKVACSGRLGGAEMSRSEFYLEGQVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 A+IDYG A T++G G+KV++ +E Sbjct: 180 ANIDYGLFEARTSFGRIGVKVWIYRDEE 207 >gi|291457208|ref|ZP_06596598.1| ribosomal protein S3 [Bifidobacterium breve DSM 20213] gi|291381043|gb|EFE88561.1| ribosomal protein S3 [Bifidobacterium breve DSM 20213] Length = 266 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 148/224 (66%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AM GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLRA IDYG A+T YG G+KV++ D A ++ Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224 >gi|224178095|ref|YP_002600920.1| ribosomal protein S3 [Pyramimonas parkeae] gi|215882762|gb|ACJ71135.1| ribosomal protein S3 [Pyramimonas parkeae] Length = 212 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 138/206 (66%), Gaps = 2/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FR+GV +S WF++ ++Y +LL EDL IR YL+ +AG++ I + R Sbjct: 1 MGQKVHPIGFRIGVTQNHSSHWFSKPNQYASLLQEDLTIRSYLKEKCVEAGISNIQLYRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 I +++ARP +I+G+KG ++ +R+ L + N + + V E+ +P+I A L+A+ Sbjct: 61 ADRVEIELHAARPVVILGRKGNGLDSLRQGLQSKLNQTRQFAIQVVEIREPDIEARLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I+ QLE+R+ FRRAMK+ + A R G +G+K+ SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FISSQLEKRIPFRRAMKQGLLRAKRAGVEGMKIQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSL 204 RA IDY A T YG GIKV+V Sbjct: 181 RADIDYCHHEANTIYGILGIKVWVFK 206 >gi|15835423|ref|NP_297182.1| 30S ribosomal protein S3 [Chlamydia muridarum Nigg] gi|270285603|ref|ZP_06194997.1| 30S ribosomal protein S3 [Chlamydia muridarum Nigg] gi|270289613|ref|ZP_06195915.1| 30S ribosomal protein S3 [Chlamydia muridarum Weiss] gi|301336999|ref|ZP_07225201.1| 30S ribosomal protein S3 [Chlamydia muridarum MopnTet14] gi|13633874|sp|Q9PJM0|RS3_CHLMU RecName: Full=30S ribosomal protein S3 gi|7190837|gb|AAF39612.1| ribosomal protein S3 [Chlamydia muridarum Nigg] Length = 224 Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 101/208 (48%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK P+ FR V W S W+ E+G L ED++IRE+L+ G A +++R Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVRIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208 >gi|322378773|ref|ZP_08053202.1| 30S ribosomal protein S3 [Helicobacter suis HS1] gi|321148803|gb|EFX43274.1| 30S ribosomal protein S3 [Helicobacter suis HS1] Length = 230 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 111/208 (53%), Positives = 150/208 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+N W SRWF A + ED +IR++L+ L AGV++ILIER Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPSSGVAVANIEEDYRIRKFLKKELYYAGVSEILIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ V +ARPGLIIGKKG DIEK++ L ++ E+ L++ EV +P+ +A L A+++ Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKTSLKDLIRKEVALNIKEVKRPQADAQLAAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA Sbjct: 121 ATQLEKRVAFRRAMKKVMQTAMKAGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDYG A A T YG+ G+KV++ + + Sbjct: 181 KIDYGFAEAFTVYGNIGVKVWLFKGEVL 208 >gi|330718966|ref|ZP_08313566.1| 30S ribosomal protein S3 [Leuconostoc fallax KCTC 3537] Length = 225 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 150/219 (68%), Gaps = 8/219 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR++++ +L A V ++ IER+ Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKFIEKNLADASVDRVEIERS 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K I +++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDISIHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRAKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q +A LERRV FRRAM+ A+Q A R GA G+K++ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQVAGDLERRVAFRRAMRGAIQRATRSGAKGIKIMVSGRLNGADIARIEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 VPL TLRA IDY A+TAYG GIK ++ D + Sbjct: 181 VPLHTLRADIDYSWDEADTAYGHLGIKTWIYRGDILPKK 219 >gi|11467723|ref|NP_050775.1| ribosomal protein S3 [Guillardia theta] gi|3914822|sp|O46900|RR3_GUITH RecName: Full=30S ribosomal protein S3, chloroplastic gi|3603048|gb|AAC35709.1| ribosomal protein S3 [Guillardia theta] Length = 216 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRL + S WFA Y LL +D KIR Y+ L+ AG++KI I R Sbjct: 1 MGQKVNPLGFRLRITSQHRSSWFATKESYPQLLEQDFKIRSYINRELEAAGISKIEISRN 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI--HLSVNEVPKPEINATLIAQ 118 + VY++RPG+I+G+ G IEKI+ + + +I ++V E+ P+ +A LI + Sbjct: 61 ANQLEVSVYTSRPGIIVGRSGLGIEKIKTDILRLLKQDISIRINVIELTNPDADANLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLE+RV FRRA ++A+Q A R G+KV SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FIAQQLEKRVAFRRATRQAIQKAQRANVQGIKVQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 RA+IDY T A T YG GIKV+V ++ Sbjct: 181 RANIDYATKEAHTTYGILGIKVWVFNGEQTP 211 >gi|76789259|ref|YP_328345.1| 30S ribosomal protein S3 [Chlamydia trachomatis A/HAR-13] gi|91207647|sp|Q3KLH5|RS3_CHLTA RecName: Full=30S ribosomal protein S3 gi|76167789|gb|AAX50797.1| SSU ribosomal protein S3P [Chlamydia trachomatis A/HAR-13] Length = 224 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 103/208 (49%), Positives = 141/208 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY TA AET YG GIKV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGIKVWINLSEKK 208 >gi|23336507|ref|ZP_00121721.1| COG0092: Ribosomal protein S3 [Bifidobacterium longum DJO10A] gi|23466136|ref|NP_696739.1| 30S ribosomal protein S3 [Bifidobacterium longum NCC2705] gi|189440575|ref|YP_001955656.1| 30S ribosomal protein S3 [Bifidobacterium longum DJO10A] gi|227546482|ref|ZP_03976531.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621016|ref|ZP_04664047.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454864|ref|YP_003662008.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum JDM301] gi|312133880|ref|YP_004001219.1| rpsc [Bifidobacterium longum subsp. longum BBMN68] gi|317483444|ref|ZP_07942434.1| ribosomal protein S3 [Bifidobacterium sp. 12_1_47BFAA] gi|322689923|ref|YP_004209657.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis 157F] gi|322691864|ref|YP_004221434.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum JCM 1217] gi|27734490|sp|P59179|RS3_BIFLO RecName: Full=30S ribosomal protein S3 gi|226697665|sp|B3DQC0|RS3_BIFLD RecName: Full=30S ribosomal protein S3 gi|23326872|gb|AAN25375.1| 30S ribosomal protein S3 [Bifidobacterium longum NCC2705] gi|189429010|gb|ACD99158.1| Ribosomal protein S3 [Bifidobacterium longum DJO10A] gi|227213031|gb|EEI80910.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516117|gb|EEQ55984.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516463|emb|CBK70079.1| SSU ribosomal protein S3P [Bifidobacterium longum subsp. longum F8] gi|296184296|gb|ADH01178.1| ribosomal protein S3 [Bifidobacterium longum subsp. longum JDM301] gi|311773173|gb|ADQ02661.1| RpsC [Bifidobacterium longum subsp. longum BBMN68] gi|316915130|gb|EFV36562.1| ribosomal protein S3 [Bifidobacterium sp. 12_1_47BFAA] gi|320456720|dbj|BAJ67342.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum JCM 1217] gi|320461259|dbj|BAJ71879.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis 157F] Length = 267 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLRA IDYG A+T YG G+KV++ D A ++ Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224 >gi|28198359|ref|NP_778673.1| 30S ribosomal protein S3 [Xylella fastidiosa Temecula1] gi|182681000|ref|YP_001829160.1| 30S ribosomal protein S3 [Xylella fastidiosa M23] gi|32129995|sp|Q87E76|RS3_XYLFT RecName: Full=30S ribosomal protein S3 gi|226697777|sp|B2I8H5|RS3_XYLF2 RecName: Full=30S ribosomal protein S3 gi|28056429|gb|AAO28322.1| 30S ribosomal protein S3 [Xylella fastidiosa Temecula1] gi|182631110|gb|ACB91886.1| ribosomal protein S3 [Xylella fastidiosa M23] gi|307579469|gb|ADN63438.1| 30S ribosomal protein S3 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 239 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 154/208 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFARYLAADLKVRQVLRKKMSQAGISKILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ ARPG++IGK+G DIE +RK++S++ +H++V EV KPE++A L+A+S+ Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIEMLRKQVSDIMGVPVHINVIEVRKPELDAQLVAESV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 I YG + A T YG G+KV + D Sbjct: 181 DIGYGFSEAYTNYGVTGVKVLMYHGDIF 208 >gi|183601950|ref|ZP_02963319.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis HN019] gi|219682863|ref|YP_002469246.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis AD011] gi|241190439|ref|YP_002967833.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195845|ref|YP_002969400.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254764512|sp|B8DW19|RS3_BIFA0 RecName: Full=30S ribosomal protein S3 gi|183218835|gb|EDT89477.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis HN019] gi|219620513|gb|ACL28670.1| ribosomal protein S3 [Bifidobacterium animalis subsp. lactis AD011] gi|240248831|gb|ACS45771.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250399|gb|ACS47338.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178163|gb|ADC85409.1| SSU ribosomal protein S3P [Bifidobacterium animalis subsp. lactis BB-12] gi|295793426|gb|ADG32961.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis V9] Length = 277 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 149/223 (66%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ + S+WF+ ++ Y + ED IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYRDFVLEDDAIRKVMNKDLERAGVSRII 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV P I+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNPAIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|300174025|ref|YP_003773191.1| 30S ribosomal protein S3 [Leuconostoc gasicomitatum LMG 18811] gi|299888404|emb|CBL92372.1| 30S ribosomal protein S3 [Leuconostoc gasicomitatum LMG 18811] Length = 223 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 8/223 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+ Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRSKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 VPL TLRA IDY A TAYG+ GIK ++ D + ++ Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223 >gi|229825315|ref|ZP_04451384.1| hypothetical protein GCWU000182_00669 [Abiotrophia defectiva ATCC 49176] gi|229790687|gb|EEP26801.1| hypothetical protein GCWU000182_00669 [Abiotrophia defectiva ATCC 49176] Length = 220 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 95/221 (42%), Positives = 144/221 (65%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV W+S+W+A G ++ L ED KIRE+L+ L AGV I IERT Sbjct: 1 MGQKVNPHGIRVGVIKDWSSKWYA-GKDFADFLVEDYKIREFLKKKLYDAGVGNIDIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +IV +++PG++IGK G D+++++ ++ ++ ++ L V E+ K ++NA L+A+ I Sbjct: 60 SDRVIVIVSTSQPGIVIGKGGADVDRLKVEVQKLSKQKVDLKVKEIKKADLNAQLVAEKI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+ LE R+ FRRAMK A+ M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA Sbjct: 120 AKDLEARISFRRAMKSAMGRTMKNGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 I+YG A A+T YG G+K ++ L + + + + Sbjct: 180 DIEYGFAEADTTYGKVGVKCWIYLGEVLPTKGNNKKEGSDK 220 >gi|86605860|ref|YP_474623.1| 30S ribosomal protein S3 [Synechococcus sp. JA-3-3Ab] gi|123738117|sp|Q2JV87|RS3_SYNJA RecName: Full=30S ribosomal protein S3 gi|86554402|gb|ABC99360.1| ribosomal protein S3 [Synechococcus sp. JA-3-3Ab] Length = 248 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 6/225 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLGV SRWFA + Y ALL ED IR YL L AG+A I IER Sbjct: 1 MGQKIHPTGFRLGVIKEHRSRWFADPARYPALLREDDLIRAYLTKQLSSAGLADIQIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN------MTNSEIHLSVNEVPKPEINAT 114 + + +ARPG+++G+ G+ ++ +R+ L I ++V EV + + A Sbjct: 61 ADQIDLEIRAARPGVVVGRGGSGLDALRQGLQKELSSHGSPERTIRINVVEVTRADAEAV 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 L+A++IAQQLERR+ FRR +++ +Q A R G G+K+ +GRLNGAE++RTE EGR+P Sbjct: 121 LLAENIAQQLERRIAFRRIVRQVIQRAQRAGVQGIKIQIAGRLNGAEIARTEWTREGRIP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 L TLRA IDY +A+T +G G+KV+V + + + Sbjct: 181 LHTLRADIDYADHIAQTTFGVIGVKVWVFKGEVLPGQERPEQKVP 225 >gi|269302425|gb|ACZ32525.1| ribosomal protein S3 [Chlamydophila pneumoniae LPCoLN] Length = 223 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 102/206 (49%), Positives = 141/206 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED++IRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVRIREFLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDY TA AET YG GIKV+++L + Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206 >gi|313206389|ref|YP_004045566.1| SSU ribosomal protein s3p [Riemerella anatipestifer DSM 15868] gi|312445705|gb|ADQ82060.1| SSU ribosomal protein S3P [Riemerella anatipestifer DSM 15868] gi|315023670|gb|EFT36674.1| 30S ribosomal protein S3 [Riemerella anatipestifer RA-YM] gi|325336166|gb|ADZ12440.1| Ribosomal protein S3 [Riemerella anatipestifer RA-GD] Length = 231 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 96/223 (43%), Positives = 150/223 (67%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G++YG + ED KIR YL+ L + G+++I I+RT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGNDYGDRIAEDYKIRRYLEARLSKGGISRIYIDRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPGLIIGK G +++K++++L +T ++ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKLTGKDVQINIFEIKRPELDAVLVADSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ AMR GA+G+K+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 AKQIENRISYRRAVKMAIAGAMRMGAEGIKIQISGRLNGAEMARSESFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A A T YG G+KV++ + + + + Sbjct: 180 DIDYHIAEAHTTYGRLGVKVWIMKGEVYGKRELSPLVGTQKKS 222 >gi|91216904|ref|ZP_01253868.1| putative 30S ribosomal protein S3 [Psychroflexus torquis ATCC 700755] gi|91185065|gb|EAS71444.1| putative 30S ribosomal protein S3 [Psychroflexus torquis ATCC 700755] Length = 236 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIKGWESNWY-GGNDYGDNLAEDHKIRKYIHARLTKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L N+T+ E+ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKNITDKEVQVNIFEIKRPELDAFLVATSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA K A+ +A+R A+G+K+ SGRLNGAE++R E Y EGR+PL T RA Sbjct: 120 ARQVENRISYRRATKMAIAAAIRMNAEGIKIQVSGRLNGAEMARVETYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY + T YG GIKV++ + EV P Sbjct: 180 DIDYALVESHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|254442541|ref|ZP_05056017.1| ribosomal protein S3 [Verrucomicrobiae bacterium DG1235] gi|198256849|gb|EDY81157.1| ribosomal protein S3 [Verrucomicrobiae bacterium DG1235] Length = 207 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 112/206 (54%), Positives = 147/206 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRL VN W SRWFAR +E+ + L+ED IRE L LK A V +I IER Sbjct: 1 MGQKTHPIGFRLAVNRNWQSRWFARKNEFASTLYEDHIIREKLMEKLKFASVPRIFIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG+KG +IEKI+ +LS T EI L + EV KPE++ATL+A+++ Sbjct: 61 SSRVRVKIFTARPGIVIGRKGQEIEKIKDELSKATGKEILLDIQEVKKPELDATLVAENV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRAMK+AVQ AM GA+G+K+ GRL GA+++RTE +G VPL TLR Sbjct: 121 ALQLERRIAFRRAMKKAVQMAMSLGANGIKIQVGGRLGGADIARTEVQRQGSVPLHTLRE 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDYGTA A T YG GIK +V ++ Sbjct: 181 EIDYGTAEARTVYGIIGIKCWVFNKE 206 >gi|195952649|ref|YP_002120939.1| ribosomal protein S3 [Hydrogenobaculum sp. Y04AAS1] gi|226697721|sp|B4U750|RS3_HYDS0 RecName: Full=30S ribosomal protein S3 gi|195932261|gb|ACG56961.1| ribosomal protein S3 [Hydrogenobaculum sp. Y04AAS1] Length = 231 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FR+GV W S+W EY LHED+ IR+Y++ K AG++K+ IER+ Sbjct: 1 MGQKTHPIGFRIGVTKDWLSKWCTSKKEYPNTLHEDIVIRKYIKERYKSAGISKVTIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 + R+ + S++PG+IIG+KG ++++++ L + N +I LSV+EV P+++A L+A+ Sbjct: 61 GEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERIVKNKDISLSVDEVRVPQLDAQLVAED 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA Q+ERRV RRAMKRA+ +A++ GA G+KV GR+ GA+L+R E +L GR+PLQTLR Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKGRIGGADLARAEWFLVGRMPLQTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 A IDYG A A T YG GIKV++ D + I Sbjct: 181 ADIDYGYATAYTKYGILGIKVWIYKGDILKGGKEEIMKKIEE 222 >gi|306821614|ref|ZP_07455212.1| 30S ribosomal protein S3 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550359|gb|EFM38352.1| 30S ribosomal protein S3 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 267 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 142/213 (66%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+N W+SRWFA + + ED K+R +L+ L QA ++K+ IER Sbjct: 1 MGQKVSPHGLRVGINKNWDSRWFAGKDKIAEYIKEDHKVRVFLKKELAQADLSKVEIERV 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ +++A+PG++IGK G IE+++ + +T +++++ EV P+ +A L+A I Sbjct: 61 GDKLKLNIFTAKPGMVIGKGGQGIEELKSSVEKLTGRNVYVNIEEVKNPDADAMLVAAKI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 AQ LERR+ FRRAMK+A+ M+ G G+KV SGRL GAE++RTE Y EG VPL TLR Sbjct: 121 AQSLERRIAFRRAMKQAMSRTMKTRGVKGIKVATSGRLGGAEMARTEGYAEGVVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 A IDYG A A+T YG G+KV++ + + D + Sbjct: 181 ADIDYGFAEADTTYGKLGVKVWICKGEILRDRN 213 >gi|150008978|ref|YP_001303721.1| 30S ribosomal protein S3 [Parabacteroides distasonis ATCC 8503] gi|255014809|ref|ZP_05286935.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_7] gi|256841021|ref|ZP_05546528.1| ribosomal protein S3 [Parabacteroides sp. D13] gi|298375789|ref|ZP_06985745.1| ribosomal protein S3 [Bacteroides sp. 3_1_19] gi|301312027|ref|ZP_07217949.1| ribosomal protein S3 [Bacteroides sp. 20_3] gi|189045025|sp|A6LEI5|RS3_PARD8 RecName: Full=30S ribosomal protein S3 gi|149937402|gb|ABR44099.1| 30S ribosomal protein S3 [Parabacteroides distasonis ATCC 8503] gi|256736864|gb|EEU50191.1| ribosomal protein S3 [Parabacteroides sp. D13] gi|298266826|gb|EFI08483.1| ribosomal protein S3 [Bacteroides sp. 3_1_19] gi|300830129|gb|EFK60777.1| ribosomal protein S3 [Bacteroides sp. 20_3] Length = 244 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE ++ +RRA+K A+ S MR GA+G+K+ SGRLNGAE++R+E Y EGR PL TLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T G G+KV++ + D Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKRD 211 >gi|116617335|ref|YP_817706.1| SSU ribosomal protein S3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431335|ref|ZP_03913388.1| ribosomal protein S3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122272464|sp|Q03ZN9|RS3_LEUMM RecName: Full=30S ribosomal protein S3 gi|116096182|gb|ABJ61333.1| SSU ribosomal protein S3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352928|gb|EEJ43101.1| ribosomal protein S3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 223 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 151/223 (67%), Gaps = 8/223 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IERT Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADASVDRIEIERT 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K + + +A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDVSIQTAKPGMVIGKGGSEVEKLRTQLAKLTDTDEKGRSKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 VPL TLRA IDY A TAYG+ GIK ++ D + ++ Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDVLPQKKNSK 223 >gi|262383868|ref|ZP_06077004.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_33B] gi|262294766|gb|EEY82698.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_33B] Length = 244 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE ++ +RRA+K A+ S MR GA+G+K+ SGRLNGAE++R+E Y EGR PL TLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T G G+KV++ + D Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKRD 211 >gi|325972655|ref|YP_004248846.1| ribosomal protein S3 [Spirochaeta sp. Buddy] gi|324027893|gb|ADY14652.1| ribosomal protein S3 [Spirochaeta sp. Buddy] Length = 235 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 96/209 (45%), Positives = 139/209 (66%), Gaps = 2/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NPI RLGVN TW S+W+ EY LHEDLK+R+ L ++ A ++ + I Sbjct: 1 MGQKVNPIGLRLGVNKTWKSKWYVDPREYAETLHEDLKLRKALIECPEVQGAEISDVEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++ ++RPG+IIG KG ++EK+ +L ++N ++ + + E+ KPE +A LIA Sbjct: 61 RKPQRITIVITTSRPGIIIGSKGANVEKLGARLQKLSNKKVQIKIKEIKKPEADAQLIAM 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FRRAMK AV A++ GA GVK+ SGR+ GAE++R+E EGRVPL TL Sbjct: 121 NVAKQLVSRGSFRRAMKTAVSKAIQSGAQGVKIRLSGRIGGAEIARSEWMKEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R+ IDYG A T +G G+KV+V + Sbjct: 181 RSDIDYGFTTANTTFGVIGVKVWVFNGEI 209 >gi|261338273|ref|ZP_05966157.1| ribosomal protein S3 [Bifidobacterium gallicum DSM 20093] gi|270276928|gb|EFA22782.1| ribosomal protein S3 [Bifidobacterium gallicum DSM 20093] Length = 271 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED KIR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITEDHRSKWFSDSNKPGERYRDFVLEDDKIRKAMSKDLERAGVSRII 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV P ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIYEVKNPALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDYG A+T YG G+KV++ D Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGD 210 >gi|330814193|ref|YP_004358432.1| SSU ribosomal protein S3p (S3e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487288|gb|AEA81693.1| SSU ribosomal protein S3p (S3e) [Candidatus Pelagibacter sp. IMCC9063] Length = 226 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 110/225 (48%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RL +N W+S WFA+ YG L +D KIR+Y+ ++K +G+++ILIER Sbjct: 1 MGQKINPIGIRLKINRNWDSIWFAKKEAYGTYLIQDFKIRKYINANIKNSGISRILIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K C + ++++RPG +IGKKG+DIEKI+ + + E+ +++ E+ KPE++A L+A++I Sbjct: 61 SKKCNVTIFTSRPGFVIGKKGSDIEKIKSNIGKIVTDEVSVNIKEIRKPELDAYLVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ+E+R+ +R+AMKRA+QS MR GA G+KV+ SGRL G E++RTE EG VPL TLRA Sbjct: 121 AQQIEKRIAYRKAMKRAMQSTMRIGAKGIKVMISGRLAGNEIARTEWLREGSVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG GIKVY+ + V D A + EK Sbjct: 181 EIDYAECEALTTYGIIGIKVYIY-KGVVFQKDLQKKIASEKEEEK 224 >gi|149199510|ref|ZP_01876545.1| 30S ribosomal protein S3 [Lentisphaera araneosa HTCC2155] gi|149137445|gb|EDM25863.1| 30S ribosomal protein S3 [Lentisphaera araneosa HTCC2155] Length = 232 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 104/206 (50%), Positives = 145/206 (70%), Gaps = 1/206 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FR+G W SRWFA E+ L ED++IR+ ++ K+ V++I IER Sbjct: 1 MGQKVNPVGFRIGYTKDWRSRWFASKKEFAGKLAEDIEIRKLIKGRFKEFAVSRINIERF 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119 RI +++ARPGL+IG KG IE+++ +L+ + E+ L V EV PE++A L+A+S Sbjct: 61 ANRVRIAIHTARPGLVIGSKGAQIEEVKSELAKLAKGKEVFLDVVEVRNPEVDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV +RRAMK+++Q AM GADG+KV GRL+GA+++R E Y EGRVPLQT+ Sbjct: 121 IAQQLERRVSYRRAMKKSIQVAMDMGADGIKVKCGGRLSGADIARNEVYSEGRVPLQTIS 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205 A+IDYG A A T YG G+KV++ Sbjct: 181 ANIDYGFAEANTTYGIIGVKVWICKP 206 >gi|170017937|ref|YP_001728856.1| ribosomal protein S3 [Leuconostoc citreum KM20] gi|226697727|sp|B1MW08|RS3_LEUCK RecName: Full=30S ribosomal protein S3 gi|169804794|gb|ACA83412.1| Ribosomal protein S3 [Leuconostoc citreum KM20] Length = 223 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 8/223 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+ Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDRDEKGRSKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 VPL TLRA IDY A TAYG+ GIK ++ D + ++ Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223 >gi|213693082|ref|YP_002323668.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254764513|sp|B7GND4|RS3_BIFLI RecName: Full=30S ribosomal protein S3 gi|213524543|gb|ACJ53290.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459260|dbj|BAJ69881.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 267 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEISRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLRA IDYG A+T YG G+KV++ D A ++ Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224 >gi|167749433|ref|ZP_02421560.1| hypothetical protein EUBSIR_00387 [Eubacterium siraeum DSM 15702] gi|167657605|gb|EDS01735.1| hypothetical protein EUBSIR_00387 [Eubacterium siraeum DSM 15702] gi|291532099|emb|CBK97684.1| SSU ribosomal protein S3P [Eubacterium siraeum 70/3] gi|291558160|emb|CBL35277.1| SSU ribosomal protein S3P [Eubacterium siraeum V10Sc8a] Length = 260 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 101/237 (42%), Positives = 147/237 (62%), Gaps = 17/237 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------ 48 MGQK+NP R+GV W+SRWFA + +G L ED KIR+Y+ Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAGKATFGDTLVEDYKIRDYIMNKRMLTRANGEKSDQQ 60 Query: 49 ---QAGVAKILIERTHKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSV 103 AG+A++ IER+ N +I + +A+PG++IG KG +IEK+R ++S + +++L++ Sbjct: 61 LSRAAGIAQVEIERSSDNKIKIHILTAKPGMLIGAKGAEIEKLRAEISKIAGGKDVNLNI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 EV P++NA L+A++IA QLE+RV FRRAMK + M+ GA G+K + SGRL GAE++ Sbjct: 121 VEVKNPDMNAKLVAENIAMQLEQRVSFRRAMKSCIGRTMKSGAKGIKTMVSGRLGGAEIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 R+E Y EG +PLQTLRA IDYG A A T YG G+KV++ + + E Sbjct: 181 RSENYHEGTIPLQTLRADIDYGVARANTTYGVIGVKVWIYKGEVLKGEIPAQRTTEK 237 >gi|322436540|ref|YP_004218752.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX9] gi|321164267|gb|ADW69972.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX9] Length = 228 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 103/207 (49%), Positives = 147/207 (71%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+N W SRWF Y LL ED+K++ L+ LK AGV+ + +ER Sbjct: 1 MGQKVHPYGFRLGINKPWKSRWFVE-RGYDKLLVEDVKLKAELREKLKAAGVSSVEVERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG+IIG+KG +I+K++ + T+ E+ + + EV KPE++A L++++I Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIDKLKADIQKRTSREVFIDILEVNKPELDAQLVSENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDYG + A T YG G+K +V D Sbjct: 180 DIDYGFSEAHTTYGIIGVKTWVYRGDI 206 >gi|296111435|ref|YP_003621817.1| 30S ribosomal protein S3 [Leuconostoc kimchii IMSNU 11154] gi|295832967|gb|ADG40848.1| 30S ribosomal protein S3 [Leuconostoc kimchii IMSNU 11154] Length = 223 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 8/223 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+ Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60 Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112 K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++ Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDTDEKGRSKRVFINIVEIKKPDLS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+ Q IA LERRV FRRAM+ A+Q R GA G+KV+ SGRLNGA+++R E Y EG Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRTTRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 VPL TLRA IDY A TAYG+ GIK ++ D + ++ Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223 >gi|330444119|ref|YP_004377105.1| 30S ribosomal protein S3 [Chlamydophila pecorum E58] gi|328807229|gb|AEB41402.1| ribosomal protein S3 [Chlamydophila pecorum E58] Length = 230 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 144/218 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTSVTKKWRSLWYGNKQEFGNFLIEDVKIREFLRKKPSCQGAAGFIVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKGT+++ ++++L +T E+ + + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGTEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GA ++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAAIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDY TA AET YG G+KV+++L ++ + + A Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEKTASAAPRNEAV 218 >gi|288929334|ref|ZP_06423179.1| ribosomal protein S3 [Prevotella sp. oral taxon 317 str. F0108] gi|288329436|gb|EFC68022.1| ribosomal protein S3 [Prevotella sp. oral taxon 317 str. F0108] Length = 244 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 151/223 (67%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G + ED+KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNIVEDMKIRKYLNERLAKANVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV +P+++AT++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKRPDLDATIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A A T G GIKV++ + D D T + + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGDRDLTPNFTQDKQS 222 >gi|29839867|ref|NP_828973.1| 30S ribosomal protein S3 [Chlamydophila caviae GPIC] gi|33301545|sp|Q824P5|RS3_CHLCV RecName: Full=30S ribosomal protein S3 gi|29834214|gb|AAP04851.1| ribosomal protein S3 [Chlamydophila caviae GPIC] Length = 223 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 141/207 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNKQEFGKFLIEDVKIREHLRKKPSCQGAAGFIVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAIGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY TA AET YG G+KV+++L ++ Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEK 207 >gi|223983927|ref|ZP_03634087.1| hypothetical protein HOLDEFILI_01368 [Holdemania filiformis DSM 12042] gi|223964119|gb|EEF68471.1| hypothetical protein HOLDEFILI_01368 [Holdemania filiformis DSM 12042] Length = 265 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A +YG LL ED+KIRE+L L A V++I IER+ Sbjct: 1 MGQKVSPIGMRVGVIRDWESRWYAE-KDYGTLLMEDVKIREFLLKELHAAYVSRIEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119 II+ +ARPG+IIG G IE ++KKL M +IH+ V EV P+++A L+A++ Sbjct: 60 KNRVEIIIRAARPGVIIGSNGESIEILKKKLQKMCAGKQIHIKVVEVANPDLDAHLVARA 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+QLE+R FR KR +Q MR GA G++ + SGRL GA+++R+E Y EG VPL TLR Sbjct: 120 IAEQLEQRASFRTCQKRQIQKTMRAGAKGIRTLVSGRLGGADIARSEGYSEGVVPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 + ID+ A T YG G+KV++ + + P A Sbjct: 180 SDIDFAIVEAMTTYGKLGVKVWICRGEVLPGQMVQEPEAPK 220 >gi|332182010|gb|AEE17698.1| ribosomal protein S3 [Treponema brennaborense DSM 12168] Length = 248 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 108/231 (46%), Positives = 150/231 (64%), Gaps = 5/231 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NPI RLGVN TW SRW+A EY L+ EDLKIR+ +Q K A +A+I I Sbjct: 1 MGQKVNPIGLRLGVNKTWQSRWYADSREYADLVLEDLKIRKMVQDLPECKNADIAEIEIV 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++++ARPG+IIG KG +IEKI ++ ++ + + E+ + EINA+LIAQ Sbjct: 61 RHPQRVTIVIHTARPGVIIGVKGANIEKIGVEIQKHLTKKVQIKIKEIKRAEINASLIAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FR+A+K+A +AM+ G+ GVK+ SGRL GAE+SRTE + EGRVPL TL Sbjct: 121 NVARQLMSRGSFRKALKQASGNAMKAGSQGVKIRISGRLGGAEMSRTEEHKEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE--HRVVEKDS 227 RA IDYG A A T YG G+KV+V + + A + + + S Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWVY-NGMMYSHEQNEDAGQLVKKQRRERS 230 >gi|294674765|ref|YP_003575381.1| 30S ribosomal protein S3 [Prevotella ruminicola 23] gi|294473167|gb|ADE82556.1| ribosomal protein S3 [Prevotella ruminicola 23] Length = 240 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A V+KI+IERT Sbjct: 1 MGQKVNPISNRLGIVRGWDSNWF-GGKDFGDNLVEDQKIRKYLNERLAKASVSKIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPGL+IGK G D++K++++L + + EI +++ EV +PE++AT++A +I Sbjct: 60 LKLVTITICTARPGLVIGKGGQDVDKLKEELKKLYDKEIQINIFEVKRPELDATIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV SGRLNGAE++R+E EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKVQISGRLNGAEIARSEMLKEGRTPLHTYRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T G GIKV++ + + D + + + + Sbjct: 180 DIDYCHAEALTKVGILGIKVWICRGEIYGNVDLAPNFTQEKSNGRSN 226 >gi|300775020|ref|ZP_07084883.1| 30S ribosomal protein S3 [Chryseobacterium gleum ATCC 35910] gi|300506835|gb|EFK37970.1| 30S ribosomal protein S3 [Chryseobacterium gleum ATCC 35910] Length = 249 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 151/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G++YG + ED KIR YL+ L + G++KI IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGNDYGDRIAEDYKIRRYLEARLSKGGISKIYIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPGLIIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKLTGKDIQINIFEIKRPELDAVLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 ++Q+E R+ +RRA+K A+ S MR GA+G+KV SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 SKQIENRISYRRAVKMAMASTMRMGAEGIKVQISGRLNGAEMARSESFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A A T YG G+KV++ + + + + + Sbjct: 180 DIDYHWAEAHTTYGRLGVKVWIMKGEVYGKRELSPLVGQQKK 221 >gi|28493515|ref|NP_787676.1| 30S ribosomal protein S3 [Tropheryma whipplei str. Twist] gi|28572373|ref|NP_789153.1| 30S ribosomal protein S3 [Tropheryma whipplei TW08/27] gi|61215753|sp|Q83FZ2|RS3_TROWT RecName: Full=30S ribosomal protein S3 gi|61215759|sp|Q83I72|RS3_TROW8 RecName: Full=30S ribosomal protein S3 gi|28410504|emb|CAD66890.1| 30s ribosomal protein S3 [Tropheryma whipplei TW08/27] gi|28476557|gb|AAO44645.1| 30S ribosomal protein S3 [Tropheryma whipplei str. Twist] Length = 220 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 98/209 (46%), Positives = 140/209 (66%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP RLG+ S W++ G Y + ED+KIR YL L +AG+A+I Sbjct: 1 MGQKINPYGLRLGITTDHVSHWYSDSTRPGQRYADYVSEDIKIRSYLTKTLDRAGIARIE 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +Y+ARPG++IG++G + ++ R +L +T+ ++ L++ EV PE A L+ Sbjct: 61 IERTRDRIRVDIYTARPGIVIGRRGAEADRYRLELEKITSKQVQLNILEVKNPETTARLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++ +QSA G G+++ +GRL GAE+SR+E Y+EG+VPLQ Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQSATSAGVRGIRIRLAGRLGGAEISRSEFYIEGQVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TLRA IDYG A T YG G+KV++ + Sbjct: 181 TLRASIDYGFYEARTPYGHIGVKVWIYKK 209 >gi|224283715|ref|ZP_03647037.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171] gi|310288018|ref|YP_003939277.1| 30S ribosomal protein S3 [Bifidobacterium bifidum S17] gi|311064891|ref|YP_003971617.1| 30S ribosomal protein S3 RpsC [Bifidobacterium bifidum PRL2010] gi|313140871|ref|ZP_07803064.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171] gi|309251955|gb|ADO53703.1| 30S ribosomal protein S3 [Bifidobacterium bifidum S17] gi|310867211|gb|ADP36580.1| RpsC 30S ribosomal protein S3 [Bifidobacterium bifidum PRL2010] gi|313133381|gb|EFR50998.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171] Length = 272 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ + S+WF+ ++ Y + ED KIR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYSDFVLEDDKIRKVMNKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + EK+R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHAARPGIVIGRRGAEAEKVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDYG A+T YG G+KV++ D Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGD 210 >gi|15836173|ref|NP_300697.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae J138] gi|16752399|ref|NP_444658.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae AR39] gi|33241998|ref|NP_876939.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae TW-183] gi|12644034|sp|Q9Z7R3|RS3_CHLPN RecName: Full=30S ribosomal protein S3 gi|7189040|gb|AAF37989.1| ribosomal protein S3 [Chlamydophila pneumoniae AR39] gi|8979013|dbj|BAA98848.1| S3 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236508|gb|AAP98596.1| ribosomal protein S3 [Chlamydophila pneumoniae TW-183] gi|301051557|gb|ADK54932.1| 30S ribosomal protein S3 [Chlamydophila psittaci] Length = 223 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 101/206 (49%), Positives = 141/206 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED++IR++L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVRIRQFLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDY TA AET YG GIKV+++L + Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206 >gi|58584593|ref|YP_198166.1| 30S ribosomal protein S3 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75507982|sp|Q5GSV0|RS3_WOLTR RecName: Full=30S ribosomal protein S3 gi|58418909|gb|AAW70924.1| Ribosomal protein S3 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 206 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 107/204 (52%), Positives = 147/204 (72%), Gaps = 2/204 (0%) Query: 1 MGQKINPILFRLGVNCT-WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NPI FRL +N W+S W+A +Y LH+DL IR Y+ K AG++KI+IER Sbjct: 1 MGQKVNPIGFRLKINNNTWDSVWYAN-KDYKEKLHQDLFIRSYINESFKHAGLSKIIIER 59 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++S+RPG+IIGKKG DIEK+++K++ + + ++V + +PEI+A LI+ S Sbjct: 60 KVDLLSVTIHSSRPGVIIGKKGLDIEKVKQKIAEKVKNSVEVNVVGIKRPEIDAALISSS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLE+RV FRRAMK+A+QS +R G G+KV SGRL GAE++RTE Y EGR+PL TLR Sbjct: 120 IAQQLEKRVSFRRAMKKAIQSCLRMGGGGIKVGCSGRLGGAEIARTEWYKEGRLPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203 A+IDY A+T YG G+KV+V Sbjct: 180 ANIDYAFCEAKTIYGIIGVKVWVY 203 >gi|163847929|ref|YP_001635973.1| 30S ribosomal protein S3 [Chloroflexus aurantiacus J-10-fl] gi|222525809|ref|YP_002570280.1| 30S ribosomal protein S3 [Chloroflexus sp. Y-400-fl] gi|189044964|sp|A9WH72|RS3_CHLAA RecName: Full=30S ribosomal protein S3 gi|254764522|sp|B9LJD8|RS3_CHLSY RecName: Full=30S ribosomal protein S3 gi|163669218|gb|ABY35584.1| ribosomal protein S3 [Chloroflexus aurantiacus J-10-fl] gi|222449688|gb|ACM53954.1| ribosomal protein S3 [Chloroflexus sp. Y-400-fl] Length = 243 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 101/211 (47%), Positives = 144/211 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG W S+WFA G EY LHED+++R+ + L+ AGV++I IER+ Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAEGEEYTRQLHEDIELRKLISKELQSAGVSRIEIERS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I VY+A+PG++IGK+GT+++ ++ L T +I L++ E+ +PE++A L+A+SI Sbjct: 61 ANKIEISVYTAKPGIVIGKRGTNVDTLKSALERKTGKKIKLNIKEIHQPELDAQLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +Q+ RRV ++RAMK+AVQ AMR GA GVKV SGRL GAE+SR EGRVP TLRA Sbjct: 121 GEQITRRVSYKRAMKQAVQRAMRLGAQGVKVRCSGRLGGAEMSRVHEEAEGRVPRHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 IDY A T YG G+KV++ + + Sbjct: 181 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPNQ 211 >gi|303240965|ref|ZP_07327476.1| ribosomal protein S3 [Acetivibrio cellulolyticus CD2] gi|302591551|gb|EFL61288.1| ribosomal protein S3 [Acetivibrio cellulolyticus CD2] Length = 222 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 145/209 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G+ W+++W+A + L ED KIR++++ L +G+++I IER Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYAGNKNFSDFLVEDFKIRKFIKKKLYTSGISRIEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++ V +A+PGL+IGK G IE++RK+L MT + +++ E+ PE+++ ++A++I Sbjct: 61 ANKVKVNVNTAKPGLVIGKGGAGIEELRKQLEKMTQKNVLINITEIKVPELDSQIVAENI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+R+ FR+AMK+A+ +M+ GA G+K +GR+ GAE++RTE Y EG +PLQTLRA Sbjct: 121 ASQLEKRISFRKAMKQAMTRSMKLGAKGIKTQVAGRVGGAEIARTEHYHEGTIPLQTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 +DYG A A+T YG G+KV++ + + Sbjct: 181 DVDYGFAEADTTYGKLGVKVWIYKGEVLP 209 >gi|160872272|ref|ZP_02062404.1| ribosomal protein S3 [Rickettsiella grylli] gi|159121071|gb|EDP46409.1| ribosomal protein S3 [Rickettsiella grylli] Length = 263 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 103/209 (49%), Positives = 145/209 (69%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MG K+NP+ RLG+ T +RW+A+ EY L+ DL R+ ++ L QAGV+ I IER Sbjct: 1 MGHKVNPVGIRLGITRTSTARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + +I + A+PG++IGKKG I+++R +L + + LSV EV KPE++A L+A++ Sbjct: 61 AARKSKITISVAKPGVVIGKKGEYIDQLRDQLEKIMRVPVRLSVLEVKKPELDAKLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQQLERRV+FRRAMKRAVQ+A+R GA G+K+ +GRL GAE++R+E Y EG VPL T R Sbjct: 121 IAQQLERRVMFRRAMKRAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSVPLHTFR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 A IDY A A+T YG G+KV++ + Sbjct: 181 ADIDYALAEAQTTYGKLGVKVWIYKGEVF 209 >gi|57239330|ref|YP_180466.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden] gi|161598452|ref|YP_197508.2| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden] gi|81672785|sp|Q5HAS8|RS3_EHRRW RecName: Full=30S ribosomal protein S3 gi|57161409|emb|CAH58333.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden] Length = 211 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 108/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLERRVSFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L + S ++ Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211 >gi|254412256|ref|ZP_05026031.1| ribosomal protein S3 [Microcoleus chthonoplastes PCC 7420] gi|196181222|gb|EDX76211.1| ribosomal protein S3 [Microcoleus chthonoplastes PCC 7420] Length = 241 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 100/224 (44%), Positives = 143/224 (63%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ S WFA Y +L ED IR+Y++ +L AG++ I IER Sbjct: 1 MGQKIHPIGFRLGITQEHRSCWFADTKRYPEVLQEDYIIRQYVEKNLSNAGISMIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + V++ARPG+++G+ G+ IE +R L ++ +N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLEVHTARPGVVVGRGGSGIESLRTGLQDLLGSNRQIRINVIEVARVDADAELIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRADVQGIKVQVSGRLNGAEIARTEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 RA IDY A T YG G+KV++ + + ++ P + Sbjct: 181 RADIDYSYRTASTTYGILGVKVWIFKGEIIPSTEDVAPPPTAQP 224 >gi|294790417|ref|ZP_06755575.1| ribosomal protein S3 [Scardovia inopinata F0304] gi|294458314|gb|EFG26667.1| ribosomal protein S3 [Scardovia inopinata F0304] Length = 272 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 105/223 (47%), Positives = 150/223 (67%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLGV + S+WF+ ++ Y + ED KIR+ +Q L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGVTESHRSKWFSDSTKPGERYRDFVLEDDKIRKEMQKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R KL +T ++ L++ EV I+A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRVRAKLEKITGKQVQLNIFEVKNAAIDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQSIAEQLTNRVTFRRAMRKAQQDAMRAGAQGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEARTTYGRIGVKVWIYKGDMTERQFEEQQAQQ 223 >gi|161986608|ref|YP_196549.2| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Gardel] gi|91207655|sp|Q5FFU6|RS3_EHRRG RecName: Full=30S ribosomal protein S3 Length = 211 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLERRVSFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L + S ++ Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211 >gi|288801104|ref|ZP_06406560.1| ribosomal protein S3 [Prevotella sp. oral taxon 299 str. F0039] gi|288332038|gb|EFC70520.1| ribosomal protein S3 [Prevotella sp. oral taxon 299 str. F0039] Length = 243 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 104/222 (46%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED KIR YL L +A V+KI+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGENLVEDQKIRNYLNERLAKASVSKIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+QS MR GA+G+KV SGRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKISYRRAIKMAIQSTMRAGAEGIKVQISGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A A T G GIKV++ + + D T + + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGERDLTPNFTQDKQ 221 >gi|154494386|ref|ZP_02033706.1| hypothetical protein PARMER_03741 [Parabacteroides merdae ATCC 43184] gi|218262281|ref|ZP_03476804.1| hypothetical protein PRABACTJOHN_02478 [Parabacteroides johnsonii DSM 18315] gi|154085830|gb|EDN84875.1| hypothetical protein PARMER_03741 [Parabacteroides merdae ATCC 43184] gi|218223504|gb|EEC96154.1| hypothetical protein PRABACTJOHN_02478 [Parabacteroides johnsonii DSM 18315] Length = 244 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 146/212 (68%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ RLG+ W+S W+ YG L ED KIR+YL L +A V++++IERT Sbjct: 1 MGQKVNPVSNRLGIIRGWDSNWYGGKK-YGDTLLEDSKIRKYLNARLAKASVSRVVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE ++ +RRA+K A+ S MR GA+G+KV SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQLEGKIAYRRAIKMAIASTMRMGAEGIKVQVSGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T G G+KV++ + D Sbjct: 180 DIDYALAEALTKVGLIGVKVWICRGEVYGKRD 211 >gi|304384281|ref|ZP_07366692.1| 30S ribosomal protein S3 [Prevotella marshii DSM 16973] gi|304334597|gb|EFM00879.1| 30S ribosomal protein S3 [Prevotella marshii DSM 16973] Length = 243 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 98/223 (43%), Positives = 148/223 (66%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A +++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKSFGDNLIEDRKIRKYLNERLAKASLSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + + EI +++ EV KPE++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYDKEIQINIFEVKKPELDANIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A T G GIKV++ + + D T A+ + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGECDLTPNFAQEKQS 222 >gi|310779590|ref|YP_003967923.1| SSU ribosomal protein S3P [Ilyobacter polytropus DSM 2926] gi|309748913|gb|ADO83575.1| SSU ribosomal protein S3P [Ilyobacter polytropus DSM 2926] Length = 218 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 95/214 (44%), Positives = 144/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TW+S W+A EY HED+ IRE ++ AGV+KI IERT Sbjct: 1 MGQKVDPRGLRLGITRTWDSNWYADKKEYAKYFHEDITIREVIKKTYFHAGVSKIRIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + + +++A+ G++IG+KG +IE +++KL +T ++ + V E +A L+A++ Sbjct: 61 SPSHVVVFIHTAKAGIVIGRKGAEIESLKRKLEKLTGKKLTIKVQEEKGFNTDAVLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +ERRV ++RA+ +AV AMR G G+K++ASGRLNGAE++R+E +EG+VPL TLR Sbjct: 121 IATGIERRVAYKRAINQAVMRAMRAGVKGIKIMASGRLNGAEIARSEWVVEGKVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A IDY TA A+T YG+ GIKV++ + + Sbjct: 181 ADIDYATATAQTTYGALGIKVWIFHGEVLPSKKE 214 >gi|88658625|ref|YP_507233.1| 30S ribosomal protein S3 [Ehrlichia chaffeensis str. Arkansas] gi|123750075|sp|Q2GH50|RS3_EHRCR RecName: Full=30S ribosomal protein S3 gi|88600082|gb|ABD45551.1| ribosomal protein S3 [Ehrlichia chaffeensis str. Arkansas] Length = 211 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 107/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++++ M N+ I L++ EV KPE+ A LIA++I Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQQIVKMINNNIELNIIEVKKPELKAVLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLEKRISFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L D S ++ Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGDTKSSNE 211 >gi|15618551|ref|NP_224837.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae CWL029] gi|4376939|gb|AAD18780.1| S3 Ribosomal Protein [Chlamydophila pneumoniae CWL029] Length = 223 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 101/206 (49%), Positives = 141/206 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED++IR++L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKRWRSLWYGNKQEFGKFLIEDVRIRQFLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 IDY TA AET YG GIKV+++L + Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206 >gi|73667222|ref|YP_303238.1| 30S ribosomal protein S3 [Ehrlichia canis str. Jake] gi|91207654|sp|Q3YRL5|RS3_EHRCJ RecName: Full=30S ribosomal protein S3 gi|72394363|gb|AAZ68640.1| SSU ribosomal protein S3P [Ehrlichia canis str. Jake] Length = 211 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 105/212 (49%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 1 MGQKCNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHAAISKVVIARK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++++ M N+ I L++ EV KPE+ A LIA++I Sbjct: 60 VDLIMVNVYSAKPGVIIGKKGADIDKVKQQIVKMINNNIELNIIEVKKPELKAVLIAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+R+ FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 120 AQQLEKRISFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L + S ++ Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211 >gi|313123117|ref|YP_004033376.1| 30S ribosomal protein s3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279680|gb|ADQ60399.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684726|gb|EGD26880.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 223 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP+++A L+A I Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVETLNKEINALTNKQVHINIVEIKKPDLDAKLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQTAGRLNGADIARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV+++ + + + PA + +K Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223 >gi|323344642|ref|ZP_08084866.1| 30S ribosomal protein S3 [Prevotella oralis ATCC 33269] gi|323093912|gb|EFZ36489.1| 30S ribosomal protein S3 [Prevotella oralis ATCC 33269] Length = 243 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 102/222 (45%), Positives = 152/222 (68%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++G L ED+KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDMKIRKYLNERLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ E+ KPE++AT++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEIKKPELDATIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRTGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A A T G GIKV++ + D T A+ + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGVPDLTPNFAQDKQ 221 >gi|260909756|ref|ZP_05916450.1| 30S ribosomal protein S3 [Prevotella sp. oral taxon 472 str. F0295] gi|260636181|gb|EEX54177.1| 30S ribosomal protein S3 [Prevotella sp. oral taxon 472 str. F0295] Length = 244 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 99/223 (44%), Positives = 151/223 (67%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G + ED+KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGENIVEDMKIRKYLNERLAKANVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D+++++++L + +I +++ EV +P+++AT++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDRLKEELKKLYKKDIQINIFEVKRPDLDATIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A A T G GIKV++ + + D T + + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGERDLTPNFTQDKQS 222 >gi|329962273|ref|ZP_08300279.1| ribosomal protein S3 [Bacteroides fluxus YIT 12057] gi|328530381|gb|EGF57258.1| ribosomal protein S3 [Bacteroides fluxus YIT 12057] Length = 243 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLVKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T G GIKV++ + + + + + S Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKKELAPNFTQSKESGRGS 226 >gi|104773548|ref|YP_618528.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513545|ref|YP_812451.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275685|sp|Q04C09|RS3_LACDB RecName: Full=30S ribosomal protein S3 gi|123378517|sp|Q1GBL2|RS3_LACDA RecName: Full=30S ribosomal protein S3 gi|103422629|emb|CAI97237.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092860|gb|ABJ58013.1| SSU ribosomal protein S3P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 223 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP++ A L+A I Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLEAKLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQIAGRLNGADIARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV+++ + + + PA + +K Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223 >gi|171741267|ref|ZP_02917074.1| hypothetical protein BIFDEN_00342 [Bifidobacterium dentium ATCC 27678] gi|283455372|ref|YP_003359936.1| 30S ribosomal protein S3 [Bifidobacterium dentium Bd1] gi|306823562|ref|ZP_07456937.1| 30S ribosomal protein S3 [Bifidobacterium dentium ATCC 27679] gi|309802981|ref|ZP_07697082.1| ribosomal protein S3 [Bifidobacterium dentium JCVIHMP022] gi|171276881|gb|EDT44542.1| hypothetical protein BIFDEN_00342 [Bifidobacterium dentium ATCC 27678] gi|283102006|gb|ADB09112.1| rpsC 30S ribosomal protein S3 [Bifidobacterium dentium Bd1] gi|304553269|gb|EFM41181.1| 30S ribosomal protein S3 [Bifidobacterium dentium ATCC 27679] gi|308220448|gb|EFO76759.1| ribosomal protein S3 [Bifidobacterium dentium JCVIHMP022] Length = 267 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 147/223 (65%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|229818234|ref|ZP_04448516.1| hypothetical protein BIFANG_03532 [Bifidobacterium angulatum DSM 20098] gi|229784485|gb|EEP20599.1| hypothetical protein BIFANG_03532 [Bifidobacterium angulatum DSM 20098] Length = 267 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 104/224 (46%), Positives = 149/224 (66%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLGV S+WF+ ++ Y + ED KIR+ + L++AGV+KI+ Sbjct: 1 MGQKINPFGYRLGVTENHRSKWFSDSNKAGERYRDFVLEDDKIRKEMSKDLERAGVSKIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKITGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLRA IDYG A+T YG G+KV++ D A ++ Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQN 224 >gi|167764366|ref|ZP_02436491.1| hypothetical protein BACSTE_02750 [Bacteroides stercoris ATCC 43183] gi|167697771|gb|EDS14350.1| hypothetical protein BACSTE_02750 [Bacteroides stercoris ATCC 43183] Length = 243 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T G GIKV++ + + + + + S Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSKESGRGS 226 >gi|160888392|ref|ZP_02069395.1| hypothetical protein BACUNI_00805 [Bacteroides uniformis ATCC 8492] gi|218131321|ref|ZP_03460125.1| hypothetical protein BACEGG_02932 [Bacteroides eggerthii DSM 20697] gi|270294746|ref|ZP_06200947.1| 30S ribosomal protein S3 [Bacteroides sp. D20] gi|317476350|ref|ZP_07935599.1| ribosomal protein S3 [Bacteroides eggerthii 1_2_48FAA] gi|317477745|ref|ZP_07936938.1| ribosomal protein S3 [Bacteroides sp. 4_1_36] gi|319900930|ref|YP_004160658.1| SSU ribosomal protein S3P [Bacteroides helcogenes P 36-108] gi|329956709|ref|ZP_08297282.1| ribosomal protein S3 [Bacteroides clarus YIT 12056] gi|156862069|gb|EDO55500.1| hypothetical protein BACUNI_00805 [Bacteroides uniformis ATCC 8492] gi|217986253|gb|EEC52590.1| hypothetical protein BACEGG_02932 [Bacteroides eggerthii DSM 20697] gi|270273993|gb|EFA19854.1| 30S ribosomal protein S3 [Bacteroides sp. D20] gi|316906090|gb|EFV27851.1| ribosomal protein S3 [Bacteroides sp. 4_1_36] gi|316907376|gb|EFV29081.1| ribosomal protein S3 [Bacteroides eggerthii 1_2_48FAA] gi|319415961|gb|ADV43072.1| SSU ribosomal protein S3P [Bacteroides helcogenes P 36-108] gi|328524081|gb|EGF51157.1| ribosomal protein S3 [Bacteroides clarus YIT 12056] Length = 243 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T G GIKV++ + + + + + S Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKKELAPNFTQSKESGRGS 226 >gi|58417922|emb|CAI27126.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden] Length = 217 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 108/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 7 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 65 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I Sbjct: 66 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 125 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 126 AQQLERRVSFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 185 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L + S ++ Sbjct: 186 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 217 >gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703] gi|152060848|sp|A1A075|RS3_BIFAA RecName: Full=30S ribosomal protein S3 gi|118764929|dbj|BAF39108.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703] Length = 267 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 146/223 (65%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKVGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EG VPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGCVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|308235490|ref|ZP_07666227.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14018] gi|311115161|ref|YP_003986382.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14019] gi|310946655|gb|ADP39359.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14019] Length = 271 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 104/223 (46%), Positives = 148/223 (66%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ SRWF+ ++ Y + ED KIR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSRWFSDSTKAGERYRDFVLEDDKIRKEMSHDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|58416962|emb|CAI28075.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Gardel] Length = 217 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R Sbjct: 7 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 65 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I Sbjct: 66 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 125 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLERRV FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA Sbjct: 126 AQQLERRVSFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 185 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 +IDYG + A+T YG G+KV+V L + S ++ Sbjct: 186 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 217 >gi|86141146|ref|ZP_01059692.1| putative 30S ribosomal protein S3 [Leeuwenhoekiella blandensis MED217] gi|85831705|gb|EAQ50160.1| putative 30S ribosomal protein S3 [Leeuwenhoekiella blandensis MED217] Length = 238 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +TN E+ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKQITNKEVQINIFEIKRPELDAYLVASSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA K A+ +AMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRATKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|189465424|ref|ZP_03014209.1| hypothetical protein BACINT_01777 [Bacteroides intestinalis DSM 17393] gi|224537823|ref|ZP_03678362.1| hypothetical protein BACCELL_02710 [Bacteroides cellulosilyticus DSM 14838] gi|189437698|gb|EDV06683.1| hypothetical protein BACINT_01777 [Bacteroides intestinalis DSM 17393] gi|224520509|gb|EEF89614.1| hypothetical protein BACCELL_02710 [Bacteroides cellulosilyticus DSM 14838] Length = 243 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G+ YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T G GIKV++ + + + + + S Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSKESGRGS 226 >gi|298243962|ref|ZP_06967769.1| ribosomal protein S3 [Ktedonobacter racemifer DSM 44963] gi|297557016|gb|EFH90880.1| ribosomal protein S3 [Ktedonobacter racemifer DSM 44963] Length = 339 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 144/229 (62%), Gaps = 12/229 (5%) Query: 1 MGQKINPILFRLGVNCTWNS---RWFARGSEYGALLHEDLKIREYLQCHLKQA------- 50 MG K++PI FRLGV W S RW+A + Y +L ED++IR + L A Sbjct: 1 MGHKVHPIGFRLGVIKGWESWQSRWYAE-NNYKDVLAEDIQIRRMINKELSSAHGAKVDA 59 Query: 51 GVAKILIERT-HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKP 109 GV+KI IER K + + +A+PG++IGK G +E+++ L + T + + + E+ +P Sbjct: 60 GVSKIEIERAAPKQVLVKINTAKPGIVIGKSGEKVERLKAHLESKTQKRVRVEIVEIRQP 119 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 E++A L+ +SI QLE+RV FRRAMK+AVQ +MR GA G+KVIA GRL GAE++RTE + Sbjct: 120 ELDAYLVGRSICDQLEKRVSFRRAMKQAVQKSMRAGAKGIKVIAGGRLGGAEIARTEKEV 179 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 EG+VPL TLRA IDYG A A T +G G+KV++ D + A Sbjct: 180 EGKVPLHTLRADIDYGLAEAHTTFGVIGVKVWIYRGDILPSRRRESAEA 228 >gi|283782763|ref|YP_003373517.1| ribosomal protein S3 [Gardnerella vaginalis 409-05] gi|283441952|gb|ADB14418.1| ribosomal protein S3 [Gardnerella vaginalis 409-05] Length = 272 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 148/223 (66%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED KIR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDKIRKEMSHDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|294786417|ref|ZP_06751671.1| ribosomal protein S3 [Parascardovia denticolens F0305] gi|315225979|ref|ZP_07867767.1| 30S ribosomal protein S3 [Parascardovia denticolens DSM 10105] gi|294485250|gb|EFG32884.1| ribosomal protein S3 [Parascardovia denticolens F0305] gi|315120111|gb|EFT83243.1| 30S ribosomal protein S3 [Parascardovia denticolens DSM 10105] Length = 270 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NP +RLGV S+WF+ ++ Y + ED KIR+ ++ L++AGV++I+ Sbjct: 1 MGQKVNPFGYRLGVTEYHRSKWFSDSTKVGERYRDFVLEDDKIRKEMEKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + +++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRVRAKLEKITGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQSIAEQLTNRVTFRRAMRKAQQDAMRAGAHGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A++ Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQASQ 223 >gi|113170446|ref|YP_717238.1| Rps3 [Ostreococcus tauri] gi|122235244|sp|Q0P3L7|RR3_OSTTA RecName: Full=30S ribosomal protein S3, chloroplastic gi|112806853|emb|CAL36360.1| Rps3 [Ostreococcus tauri] Length = 211 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 136/209 (65%), Gaps = 2/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FR+GV T S+WFA+ +Y L+ EDL IRE+ + L AG+++I I R Sbjct: 1 MGQKVHPIGFRIGVTQTHRSQWFAKPKDYAKLVEEDLLIREFAESRLPDAGISRINISRQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 I ++ARP ++G KG + ++R ++ + L V + +PE+ A IA+ Sbjct: 61 VDRIEIEFFTARPRALVGAKGETLTQLRDEIKAKLPDTRNVALYVTKTQQPEMEAICIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA+QLE+R FRR M++A+ A + GA+G+K+ SGRLNGAE++R E EGRVPL T+ Sbjct: 121 NIAEQLEKRTPFRRTMRQAIMRARKAGAEGIKIQISGRLNGAEIARHEWAREGRVPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 RA IDY TA A+T YG GIKV+V ++ Sbjct: 181 RADIDYATARAQTIYGILGIKVWVCKGEK 209 >gi|282880994|ref|ZP_06289685.1| ribosomal protein S3 [Prevotella timonensis CRIS 5C-B1] gi|281305217|gb|EFA97286.1| ribosomal protein S3 [Prevotella timonensis CRIS 5C-B1] Length = 242 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A +++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDRKIRKYLNERLAKASLSRIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ + +I +++ EV KPE++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFHKDIQINIFEVKKPELDAIIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+Q+ MR GA+G+K+ +GRLNGAE++R E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKIQITGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T G GIKV++ + + T ++ + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEIYGKQELTPNFSQEKA 221 >gi|320103623|ref|YP_004179214.1| 30S ribosomal protein S3P [Isosphaera pallida ATCC 43644] gi|319750905|gb|ADV62665.1| SSU ribosomal protein S3P [Isosphaera pallida ATCC 43644] Length = 234 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 108/230 (46%), Positives = 147/230 (63%), Gaps = 6/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FR+G+ W SRW+A ++ LL ED KIR+Y++ AG+ K+ IERT Sbjct: 1 MGQKVRPTGFRVGIMEDWRSRWYASKQDFSDLLVEDFKIRKYIKTKHGNAGIPKVEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+++ARPG+IIGKKG ++EK++++L +T I + + EV +PEINA LIA+ I Sbjct: 61 RDAVKVILFTARPGVIIGKKGAEVEKLQEELQKLTGRRIDIKIEEVNRPEINAQLIAEDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+RRV FRR +KRA +S M GA GVKV SGRL GAE+SRTE G +PL TLRA Sbjct: 121 ADQLQRRVSFRRTIKRAQESTMEAGAKGVKVQLSGRLGGAEMSRTEQGAAGSIPLSTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS------DSDSTIPAAEHRVVE 224 IDYG A A+T G GIKV+V+ D + D+ + Sbjct: 181 KIDYGFAEAKTPQGHIGIKVWVNQGDYLKLEGSADGHDAQKGEVSKKSKR 230 >gi|257125042|ref|YP_003163156.1| ribosomal protein S3 [Leptotrichia buccalis C-1013-b] gi|257048981|gb|ACV38165.1| ribosomal protein S3 [Leptotrichia buccalis C-1013-b] Length = 218 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 146/214 (68%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TW+S+WFA G EY HEDLKI+EY++ + AG++ I IERT Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYVNNFHEDLKIKEYIKKNYYHAGISSIQIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 +I+ + + G++IG+KG +IE ++ KL +T + + V E+ P +A L+A+S Sbjct: 61 SPTEVAVIIETGKAGILIGRKGQEIEALKVKLEKLTGKRVQIKVQEIKNPNKDAQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TLR Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKAGIKGIKVMVSGRLNGAEIARSEWTLSGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A +DY TA A T YG+ G+KV++ + +S + Sbjct: 181 ADVDYATATAHTTYGALGLKVWIFNGEVLSTTKE 214 >gi|154486753|ref|ZP_02028160.1| hypothetical protein BIFADO_00578 [Bifidobacterium adolescentis L2-32] gi|154084616|gb|EDN83661.1| hypothetical protein BIFADO_00578 [Bifidobacterium adolescentis L2-32] Length = 267 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 147/223 (65%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITENHCSKWFSDSNKVGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|325125181|gb|ADY84511.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 223 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP++ A L+A I Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLEAKLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQTAGRLNGADIARREWHTEGSVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A T YG G+KV+++ + + + PA + +K Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223 >gi|62184743|ref|YP_219528.1| 30S ribosomal protein S3 [Chlamydophila abortus S26/3] gi|81313074|sp|Q5L714|RS3_CHLAB RecName: Full=30S ribosomal protein S3 gi|62147810|emb|CAH63556.1| 30S ribosomal protein s3 [Chlamydophila abortus S26/3] Length = 223 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 99/207 (47%), Positives = 140/207 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREFLRKKPSCQGAAGFVVRRM 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY A A T YG G+KV+++L ++ Sbjct: 181 DIDYAAASAATTYGIIGVKVWINLGEK 207 >gi|255536148|ref|YP_003096519.1| 30S ribosomal protein S3 [Flavobacteriaceae bacterium 3519-10] gi|255342344|gb|ACU08457.1| SSU ribosomal protein S3p (S3e) [Flavobacteriaceae bacterium 3519-10] Length = 251 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S WF G YG + ED KIR YL+ L + G+++I IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGKNYGDRIAEDYKIRRYLEARLSKGGISRIYIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPGLIIGK G +++K++++L +T+ +I +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKITDKDIQINIFEIKRPELDAVLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K ++QS MR GA+G+KV SGRLNGAE++R+E + +GR+PL T RA Sbjct: 120 AKQIENRISYRRAVKMSIQSTMRMGAEGIKVQISGRLNGAEMARSESFKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T YG G+KV++ + D + + + Sbjct: 180 DIDYHIGEALTQYGKLGVKVWIMKGEVYGKRDLSPLVGQQKK 221 >gi|149922205|ref|ZP_01910643.1| ribosomal protein S3 [Plesiocystis pacifica SIR-1] gi|149816945|gb|EDM76430.1| ribosomal protein S3 [Plesiocystis pacifica SIR-1] Length = 225 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 113/226 (50%), Positives = 155/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI FRLG+ TWNSRWF G Y LHEDL++R +L+ L A +++I IER Sbjct: 1 MGQKTHPIGFRLGIVKTWNSRWFEEGR-YKQWLHEDLQLRGFLKRKLISASISEITIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I ++SARPG+IIGK+G ++EKIR+++ MT+S++ L++ EV K E+NA L+A++I Sbjct: 60 ANKVKINIFSARPGIIIGKRGAEVEKIRREVQKMTDSKVFLNIQEVRKAEVNAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 QQLERR+ FRRA+KRAVQ+AM+FGA G++V A+GRL GAE+ R E YL+GRVPL TLRA Sbjct: 120 GQQLERRIAFRRALKRAVQTAMKFGAKGIRVNAAGRLGGAEMGRREWYLQGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDYG A T G GIK ++ + P ++ Sbjct: 180 DIDYGFHEARTPAGRIGIKCWIFKGEVYGSMSGVDPRFPRPANKRS 225 >gi|317054772|ref|YP_004103239.1| 30S ribosomal protein S3 [Ruminococcus albus 7] gi|315447041|gb|ADU20605.1| ribosomal protein S3 [Ruminococcus albus 7] Length = 272 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 101/227 (44%), Positives = 141/227 (62%), Gaps = 16/227 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK+NP R+GV W+SRWFA S +G L ED IR+ + L + Sbjct: 1 MGQKVNPHGLRVGVIKNWDSRWFADKSTFGDTLVEDYNIRKDIMKDLNRRSKNPADKCVY 60 Query: 50 AGVAKILIERT-----HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104 AGV K+ IER + RI +Y A+PG++IGK G +I+K+R+ + + +++ Sbjct: 61 AGVPKVEIERFTGKDGAQKVRIHIYCAKPGMVIGKGGAEIDKLRESIEKKIGKSVAINIV 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 EV P+INA L+A+ IA LE R+ FRRAMK+++ AM+ GA G+KV SGRL GAE++R Sbjct: 121 EVKNPDINAQLVAEKIAHDLEDRISFRRAMKQSIGRAMKLGAKGIKVKVSGRLAGAEIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 +E Y EG +PLQT+RA IDYGTA A T YG GIKV++ + + Sbjct: 181 SESYHEGTIPLQTIRADIDYGTAEAHTTYGRLGIKVWIYRGEVLKGE 227 >gi|329121834|ref|ZP_08250449.1| 30S ribosomal protein S3 [Dialister micraerophilus DSM 19965] gi|327467772|gb|EGF13264.1| 30S ribosomal protein S3 [Dialister micraerophilus DSM 19965] Length = 249 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 104/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WNS+WFA Y A L ED KIR++L+ HL AG++KI I+R Sbjct: 1 MGQKVNPHGMRVGVINDWNSKWFAE-KNYAAQLVEDTKIRQFLKKHLFVAGISKIGIKRV 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+A+PG++IG+ GT IE I+K L +T+ EI + + E+ +++A L+ ++I Sbjct: 60 GNRVKIAIYTAKPGMVIGRGGTGIEDIKKALKTVTDKEIDIDILEIKSSDLSAILVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRA+K+AV MR GA GVKV SGRL GAE++ +E Y EG +PLQTLRA Sbjct: 120 ASQLERRIGFRRAVKQAVGRTMRSGAKGVKVTVSGRLGGAEIAHSESYREGSIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 +IDYG +VA T +G+ GIKV++ + Sbjct: 180 NIDYGVSVAHTTFGAIGIKVWIYKGELAPGQMVDEAE 216 >gi|291514949|emb|CBK64159.1| SSU ribosomal protein S3P [Alistipes shahii WAL 8301] Length = 262 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 142/205 (69%), Gaps = 1/205 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSDKLVEDAKIRKYLNVRLAKASISKIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A ++ Q+I Sbjct: 60 LKLVTVTISTARPGIIIGKGGQEVDKLKEELKKLTGKEIQINIFEVKRPEVDAVIVGQNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA+K AV S MR GA+G+K+ +GR+ GAE++RTE EGR+PL T RA Sbjct: 120 ARQLEGRVSFRRAVKTAVASTMRMGAEGIKIQVAGRVGGAEMARTETIKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 IDY A T G G+KV++ Sbjct: 180 DIDYCLTEALTKVGILGVKVWICQG 204 >gi|260891588|ref|ZP_05902851.1| hypothetical protein GCWU000323_02803 [Leptotrichia hofstadii F0254] gi|260858696|gb|EEX73196.1| ribosomal protein S3 [Leptotrichia hofstadii F0254] Length = 218 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 146/214 (68%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ TW+S+WFA G EY HEDLKI+EY++ + AG++ I IERT Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYVNNFHEDLKIKEYVKKNYYHAGISSIQIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 +I+ + + G++IG+KG +IE ++ KL +T + + V E+ P +A L+A+S Sbjct: 61 SPTEVAVIIETGKAGILIGRKGQEIEALKVKLEKLTGKRVQIKVQEIKNPNKDAQLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TLR Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKAGIKGIKVMVSGRLNGAEIARSEWTLSGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A +DY TA A T YG+ G+KV++ + +S + Sbjct: 181 ADVDYATATAHTTYGALGLKVWIFNGEVLSTTKE 214 >gi|320538159|ref|ZP_08038054.1| ribosomal protein S3 [Treponema phagedenis F0421] gi|320144976|gb|EFW36697.1| ribosomal protein S3 [Treponema phagedenis F0421] Length = 251 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 101/228 (44%), Positives = 143/228 (62%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NPI RLG+N TW+SRW+A EY LHEDL+IR+ +Q K +A + I Sbjct: 1 MGQKVNPIGLRLGINKTWSSRWYADPREYADTLHEDLRIRKIIQELPEAKNDDIACVDII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++++ARPG+IIG KG IEKI + + ++ + + E+ + E+NA+L+AQ Sbjct: 61 RHPQRITIMIHTARPGVIIGVKGATIEKIGADIQKKLDKKVQIKIKEIKRAELNASLVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FR+A+K+A + M+ GA GVK+ SGRL GAE+SRTE EGR PL TL Sbjct: 121 NVARQLAGRASFRKALKQACFNTMKAGAQGVKIRVSGRLGGAEMSRTEEMKEGRTPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA IDYG A A T YG G+KV++ + + R K+ Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWLYAGMMYGNEQKEDAGSLLRKQRKE 228 >gi|226968560|ref|YP_002808513.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545] gi|226348855|gb|ACO50758.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545] Length = 227 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 144/228 (63%), Gaps = 4/228 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+GV T S+WFA+ +Y L+ EDL IR+Y+ HL A ++++ I R Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLVIRDYVAKHLSDASISRVNISRQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 I ++ARP ++G KG + K+R+ LS + + L V + +PE++A IA+ Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALSAKLPAHRSVALYVTKTVQPEVDAVCIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE+R FRR +++A++SA + GA G+KV +GRLNGAE++R+E EGRVPL T+ Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKVKIAGRLNGAEIARSEWSREGRVPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA IDY TA A T YG GIKV+V D ++ P+A + Sbjct: 181 RADIDYATARALTVYGILGIKVWVCKDD--TERFKPQPSASAPSGSEG 226 >gi|330837649|ref|YP_004412290.1| 30S ribosomal protein S3P [Spirochaeta coccoides DSM 17374] gi|329749552|gb|AEC02908.1| SSU ribosomal protein S3P [Spirochaeta coccoides DSM 17374] Length = 236 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 96/209 (45%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NPI RLG+N TW S+W+ EY LHEDL++R+ L ++ A ++ + I Sbjct: 1 MGQKVNPIGLRLGINKTWKSKWYVDPREYVDTLHEDLRLRKTLNECPEVQGAEISDVEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++ ++RPG+IIG KG ++EK+ ++L +++ ++ + + E+ KPE++A LIA Sbjct: 61 RKPQRITIVLATSRPGIIIGSKGANVEKLGQRLQKLSDKKVQIKIKEIKKPEVDAQLIAA 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FRR+MK AV AM+ GA GVK+ SGRL GAE++RTE EGRVPL TL Sbjct: 121 NVAKQLTSRGSFRRSMKMAVSKAMQGGAQGVKIRLSGRLGGAEIARTEWMKEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R+ IDYG A A T +G+ G+KV+V + Sbjct: 181 RSDIDYGFAQANTTFGAIGVKVWVFNGEI 209 >gi|330997359|ref|ZP_08321210.1| ribosomal protein S3 [Paraprevotella xylaniphila YIT 11841] gi|329570733|gb|EGG52449.1| ribosomal protein S3 [Paraprevotella xylaniphila YIT 11841] Length = 240 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 153/226 (67%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G ++G L ED KIR+YL L QA V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKDFGDSLLEDSKIRKYLNARLAQASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPGLIIGK G +++K++++L +T+ +I +++ E+ KPE++A ++A +I Sbjct: 60 LKLVTITVCTARPGLIIGKGGQEVDKLKEELKKITDKDIQINIFEIKKPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K++ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRSGAEGIKILISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A A T G GIKV++ + D A+ + + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGKRDLAPNFAQTKENSRG 225 >gi|313204923|ref|YP_004043580.1| SSU ribosomal protein s3p [Paludibacter propionicigenes WB4] gi|312444239|gb|ADQ80595.1| SSU ribosomal protein S3P [Paludibacter propionicigenes WB4] Length = 253 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 100/226 (44%), Positives = 151/226 (66%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+ W+S W+ G+ YG + ED KIR+YL L +A +++I+IERT Sbjct: 1 MGQKINPISNRLGIIRGWDSNWY-GGNNYGDTILEDSKIRKYLNARLAKASISRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A ++ Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA K A+ S MR GA+G+K++ SGRLNGAE++R+E Y EGR PL TLRA Sbjct: 120 ARQVEGKIAYRRATKMAIASTMRMGAEGIKIMCSGRLNGAEMARSEMYKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A A T G GIKV++ + D + + Sbjct: 180 DIDYAHAEALTKVGLIGIKVWICRGEIYGKKDLAPNFTATKEASRG 225 >gi|325678646|ref|ZP_08158256.1| ribosomal protein S3 [Ruminococcus albus 8] gi|324109696|gb|EGC03902.1| ribosomal protein S3 [Ruminococcus albus 8] Length = 275 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 140/227 (61%), Gaps = 16/227 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK+NP R+GV W+SRWFA S +G L ED IR+ + L + Sbjct: 1 MGQKVNPHGLRVGVIKNWDSRWFADKSTFGDTLVEDYNIRKDIMKDLNRRSKNPADKCVY 60 Query: 50 AGVAKILIERT-----HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104 AGV K+ IER + RI +Y A+PGL+IGK G +IEK+R + + +++ Sbjct: 61 AGVPKVEIERFTGKDGAQKVRIHIYCAKPGLVIGKGGAEIEKLRAAIEKKIGKSVAINIV 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 EV P+INA L+A+ IA LE R+ FRRAMK+++ AM+ GA G+KV SGRL GAE++R Sbjct: 121 EVKNPDINAQLVAEKIAHDLEDRISFRRAMKQSIGRAMKLGAKGIKVKVSGRLAGAEIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 +E Y EG +PLQT+RA IDYGTA A T YG GIKV++ + + Sbjct: 181 SESYHEGTIPLQTIRADIDYGTAEAHTTYGRLGIKVWIYRGEVLKGE 227 >gi|212716605|ref|ZP_03324733.1| hypothetical protein BIFCAT_01534 [Bifidobacterium catenulatum DSM 16992] gi|225351039|ref|ZP_03742062.1| hypothetical protein BIFPSEUDO_02621 [Bifidobacterium pseudocatenulatum DSM 20438] gi|212660309|gb|EEB20884.1| hypothetical protein BIFCAT_01534 [Bifidobacterium catenulatum DSM 16992] gi|225158495|gb|EEG71737.1| hypothetical protein BIFPSEUDO_02621 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 267 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 101/223 (45%), Positives = 148/223 (66%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKINP +RLG+ + S+WF+ ++ Y + ED IR+ + L++AGV++I+ Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYRDFVLEDDVIRKAMSKDLERAGVSRIV 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+ Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 TLRA IDYG A+T YG G+KV++ D A + Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223 >gi|166368478|ref|YP_001660751.1| 30S ribosomal protein S3 [Microcystis aeruginosa NIES-843] gi|189045019|sp|B0JHZ7|RS3_MICAN RecName: Full=30S ribosomal protein S3 gi|166090851|dbj|BAG05559.1| 30S ribosomal protein S3 [Microcystis aeruginosa NIES-843] Length = 242 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 139/220 (63%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLGV S W+A Y LL ED +IR+Y++ +L AG+A I IER Sbjct: 1 MGQKIHPLGFRLGVIKDHKSCWYADAKRYPELLQEDRRIRQYVEKNLANAGIADIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 I +++ARPG+++G+ GT IE++R L +I ++V EV + + +A LIA+ Sbjct: 61 ADQVDISIHTARPGVVVGRGGTGIEQLRLGLQKALGGQRQIRINVIEVARVDADANLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 RA IDY A T YG G+KV++ + + + A Sbjct: 181 RADIDYSYKTASTIYGILGVKVWIFKGEIIPGQEEIAAAV 220 >gi|146298155|ref|YP_001192746.1| 30S ribosomal protein S3 [Flavobacterium johnsoniae UW101] gi|189045007|sp|A5FMZ4|RS3_FLAJO RecName: Full=30S ribosomal protein S3 gi|146152573|gb|ABQ03427.1| 30S ribosomal protein S3 [Flavobacterium johnsoniae UW101] Length = 252 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G++YG L ED KIR+Y+ L +A V+K++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKLAEDHKIRKYIHARLSKASVSKVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKVTDKEVQINIFEIKRPELDAYLVATSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ ++MR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIESRISYRRAIKMAIAASMRMNAEGIKVLISGRLNGAEMARSEGFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A A T YG GIKV++ + D + A + Sbjct: 180 DIDYALAEAHTTYGRMGIKVWIMKGEVYGKRDLSPLAGMDKK 221 >gi|289824219|ref|ZP_06543814.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 213 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 104/209 (49%), Positives = 145/209 (69%), Gaps = 1/209 (0%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLII 77 WNS WFA E+ L D K+R+YL L +A V++I+IER K+ R+ +++ARPG++I Sbjct: 2 WNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVI 61 Query: 78 GKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA 137 GKKG D+EK+RK ++++ +++ EV KPE++A L+A SI QLERRV+FRRAMKRA Sbjct: 62 GKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRA 121 Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 VQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+ A T YG G Sbjct: 122 VQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 181 Query: 198 IKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +KV++ + E+ + + E + + Sbjct: 182 VKVWIF-KGEILGGMAAVEQPEKPAAQTE 209 >gi|303237478|ref|ZP_07324043.1| ribosomal protein S3 [Prevotella disiens FB035-09AN] gi|302482298|gb|EFL45328.1| ribosomal protein S3 [Prevotella disiens FB035-09AN] Length = 242 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 101/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S WF G ++G L ED KIR YL L++A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKDFGDNLLEDKKIRTYLNKRLEKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGYNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E +V +RRA+K AV + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKVAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A T G GIKV++ + + D T + + + + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQDKGNARSN 226 >gi|33519664|ref|NP_878496.1| 30S ribosomal protein S3 [Candidatus Blochmannia floridanus] gi|61215719|sp|Q7VQE2|RS3_BLOFL RecName: Full=30S ribosomal protein S3 gi|33517327|emb|CAD83712.1| 30S ribosomal subunit protein S3 [Candidatus Blochmannia floridanus] Length = 235 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 152/208 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ +W+S W+A + L+ D ++R++L L +A V++I+IER Sbjct: 1 MGQKVHPNGMRLGIIKSWHSTWYANNKNFSNNLNNDFEVRKFLLGQLSKALVSRIIIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +Y+ARPG+IIG+KG DIEK+R+K+S ++ L+++E+ KPE+ A L+A +I Sbjct: 61 AKSIRVTIYTARPGVIIGRKGEDIEKLREKVSKISGVPTKLNISEIRKPELEAKLLADNI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERRV+FRRA+KR VQSAMR GA G+KV SGRL+GAE++RTE Y EGRVPL T RA Sbjct: 121 ASQLERRVIFRRAIKRVVQSAMRLGAKGIKVEVSGRLSGAEIARTEWYREGRVPLHTFRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208 IDY + A T+YG G+KV+V + + Sbjct: 181 DIDYSLSEAHTSYGVVGVKVWVFKGEIL 208 >gi|299830384|ref|YP_003734599.1| ribosomal protein S3 [Kryptoperidinium foliaceum] gi|297385086|gb|ADI40384.1| ribosomal protein S3 [Kryptoperidinium foliaceum] Length = 214 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 136/212 (64%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A ++Y +L ED KIR Y++ K ++ + I R Sbjct: 1 MGQKTHPLGFRLGITQDHKSTWYANLNQYANVLEEDDKIRTYIKSISKANNISNLKIYRN 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 N +I + + +PG+++G+ G+ +E + L + +N ++ + V EV K +++A L+ Sbjct: 61 GLNDQIQLTIETGKPGILVGELGSGLETLLTNLKKILPSNRQVTIKVFEVEKVDLDANLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG GIKV+V + + Sbjct: 181 TLRADIDYATTEANTIYGVLGIKVWVFRSEIL 212 >gi|42526285|ref|NP_971383.1| 30S ribosomal protein S3 [Treponema denticola ATCC 35405] gi|61215637|sp|Q73PM6|RS3_TREDE RecName: Full=30S ribosomal protein S3 gi|41816397|gb|AAS11264.1| ribosomal protein S3 [Treponema denticola ATCC 35405] gi|325473229|gb|EGC76424.1| 30S ribosomal protein S3 [Treponema denticola F0402] Length = 239 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 100/232 (43%), Positives = 141/232 (60%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NP RLG+N TW+SRW+A Y LL EDLKIR +Q K A +A++ I Sbjct: 1 MGQKVNPTGLRLGINKTWSSRWYAGPRNYADLLLEDLKIRAMIQEIPECKNADIAEVEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++++ARPG+IIG KG +IE I + ++ + + EV + E+ A L+AQ Sbjct: 61 RHPQRITIMIHTARPGVIIGVKGANIENIGAIIQKKLGKKVQIKIKEVKRAELRAALVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL R FR+ +K+A + MR GA G+K+ SGRL GAE+SRTE EGRVPL TL Sbjct: 121 NVARQLAGRASFRKVLKQACFNTMRSGAQGIKIRISGRLGGAEMSRTEEMKEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVS----LRDEVSDSDSTIPAAEHRVVEKD 226 RA IDYG A A+T YG G+KV++ E + + + R + Sbjct: 181 RADIDYGFAEADTTYGKIGVKVWLYSGMMFGGEQKEDAGALLKKQRRPRTEK 232 >gi|330752354|emb|CBL87307.1| ribosomal protein S3 [uncultured Sphingobacteria bacterium] Length = 247 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 154/226 (68%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S W+ G E+G L ED KIR+YL + +AG++KILIER Sbjct: 1 MGQKVNPISLRLGIVRGWESNWY-GGKEFGVKLAEDNKIRKYLNARMPRAGISKILIERM 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V+++RPG++IGK G++++K+++++ +T ++ +++ EV +PE++A L+ QSI Sbjct: 60 LKRIIITVHTSRPGIVIGKGGSEVDKLKEEVKKLTKKDVQINIFEVKRPELDAMLVGQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ+E RV F+RA+K A+ S MR GA GVK++ SGRLNGAE++RT+ + EGR+PL T RA Sbjct: 120 AQQIEGRVNFKRAIKMAIASTMRMGAQGVKIMVSGRLNGAEMARTQQFKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +DY A T YG G+KV++ + D +I +++ Sbjct: 180 DVDYALTEALTVYGKIGVKVWIFKEEVFGKRDLSINMGMGEPKQRE 225 >gi|67923589|ref|ZP_00517061.1| ribosomal protein S3 [Crocosphaera watsonii WH 8501] gi|67854559|gb|EAM49846.1| ribosomal protein S3 [Crocosphaera watsonii WH 8501] Length = 241 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ S W+A Y LL EDL +REY++ +L AG+A I IER Sbjct: 1 MGQKIHPIGFRLGITKEHKSCWYADKKRYPELLQEDLVVREYIEKNLSNAGIADIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQKALGENRQIRINVIEVARVDADAALIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL Sbjct: 121 YIGQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225 RA IDY A+T YG GIKV++ + + + PA R + Sbjct: 181 RADIDYCYRTAQTIYGILGIKVWIFKGEVIPGQEQEAMAAPAPTPRKKRR 230 >gi|160883058|ref|ZP_02064061.1| hypothetical protein BACOVA_01021 [Bacteroides ovatus ATCC 8483] gi|237717405|ref|ZP_04547886.1| 30S ribosomal protein S3 [Bacteroides sp. D1] gi|237718737|ref|ZP_04549218.1| 30S ribosomal protein S3 [Bacteroides sp. 2_2_4] gi|260175422|ref|ZP_05761834.1| 30S ribosomal protein S3 [Bacteroides sp. D2] gi|262406170|ref|ZP_06082720.1| ribosomal protein S3 [Bacteroides sp. 2_1_22] gi|293372112|ref|ZP_06618503.1| ribosomal protein S3 [Bacteroides ovatus SD CMC 3f] gi|294644065|ref|ZP_06721842.1| ribosomal protein S3 [Bacteroides ovatus SD CC 2a] gi|298483070|ref|ZP_07001251.1| ribosomal protein S3 [Bacteroides sp. D22] gi|299144618|ref|ZP_07037686.1| ribosomal protein S3 [Bacteroides sp. 3_1_23] gi|315923652|ref|ZP_07919892.1| 30S ribosomal protein S3 [Bacteroides sp. D2] gi|156111530|gb|EDO13275.1| hypothetical protein BACOVA_01021 [Bacteroides ovatus ATCC 8483] gi|229443388|gb|EEO49179.1| 30S ribosomal protein S3 [Bacteroides sp. D1] gi|229451869|gb|EEO57660.1| 30S ribosomal protein S3 [Bacteroides sp. 2_2_4] gi|262357045|gb|EEZ06135.1| ribosomal protein S3 [Bacteroides sp. 2_1_22] gi|292632904|gb|EFF51491.1| ribosomal protein S3 [Bacteroides ovatus SD CMC 3f] gi|292640589|gb|EFF58830.1| ribosomal protein S3 [Bacteroides ovatus SD CC 2a] gi|295085422|emb|CBK66945.1| SSU ribosomal protein S3P [Bacteroides xylanisolvens XB1A] gi|298270814|gb|EFI12394.1| ribosomal protein S3 [Bacteroides sp. D22] gi|298515109|gb|EFI38990.1| ribosomal protein S3 [Bacteroides sp. 3_1_23] gi|313697527|gb|EFS34362.1| 30S ribosomal protein S3 [Bacteroides sp. D2] Length = 243 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKKELAPNFTQSK 220 >gi|29348130|ref|NP_811633.1| 30S ribosomal protein S3 [Bacteroides thetaiotaomicron VPI-5482] gi|253569597|ref|ZP_04847007.1| 30S ribosomal protein S3 [Bacteroides sp. 1_1_6] gi|298386186|ref|ZP_06995743.1| ribosomal protein S3 [Bacteroides sp. 1_1_14] gi|61215767|sp|Q8A482|RS3_BACTN RecName: Full=30S ribosomal protein S3 gi|29340033|gb|AAO77827.1| 30S ribosomal protein S3 [Bacteroides thetaiotaomicron VPI-5482] gi|251841616|gb|EES69697.1| 30S ribosomal protein S3 [Bacteroides sp. 1_1_6] gi|298261414|gb|EFI04281.1| ribosomal protein S3 [Bacteroides sp. 1_1_14] Length = 243 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKKELAPNFTQSK 220 >gi|88803744|ref|ZP_01119268.1| putative 30S ribosomal protein S3 [Polaribacter irgensii 23-P] gi|88780477|gb|EAR11658.1| putative 30S ribosomal protein S3 [Polaribacter irgensii 23-P] Length = 242 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIREY+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDRLAEDFKIREYVNARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK GT+++K++++L +T E+ +++ E+ +PE+++ L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGTEVDKLKEELKKITGKEVQINIFEIKRPELDSKLVAVSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ ++RA+K A+Q+ MR A+G+K+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIENRISYKRAIKMAIQATMRMNAEGIKIQISGRLNGAEMARSEHFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYSLVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|153805963|ref|ZP_01958631.1| hypothetical protein BACCAC_00208 [Bacteroides caccae ATCC 43185] gi|255690009|ref|ZP_05413684.1| ribosomal protein S3 [Bacteroides finegoldii DSM 17565] gi|149130640|gb|EDM21846.1| hypothetical protein BACCAC_00208 [Bacteroides caccae ATCC 43185] gi|260624617|gb|EEX47488.1| ribosomal protein S3 [Bacteroides finegoldii DSM 17565] Length = 243 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSK 220 >gi|53715460|ref|YP_101452.1| 30S ribosomal protein S3 [Bacteroides fragilis YCH46] gi|60683432|ref|YP_213576.1| 30S ribosomal protein S3 [Bacteroides fragilis NCTC 9343] gi|253566676|ref|ZP_04844129.1| 30S ribosomal protein S3 [Bacteroides sp. 3_2_5] gi|255011652|ref|ZP_05283778.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12] gi|265767554|ref|ZP_06095220.1| ribosomal protein S3 [Bacteroides sp. 2_1_16] gi|313149489|ref|ZP_07811682.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12] gi|61215468|sp|Q64NL4|RS3_BACFR RecName: Full=30S ribosomal protein S3 gi|81313520|sp|Q5L8B5|RS3_BACFN RecName: Full=30S ribosomal protein S3 gi|52218325|dbj|BAD50918.1| 30S ribosomal protein S3 [Bacteroides fragilis YCH46] gi|60494866|emb|CAH09673.1| putative 30S ribosomal protein S3 [Bacteroides fragilis NCTC 9343] gi|251944848|gb|EES85323.1| 30S ribosomal protein S3 [Bacteroides sp. 3_2_5] gi|263252859|gb|EEZ24371.1| ribosomal protein S3 [Bacteroides sp. 2_1_16] gi|301164917|emb|CBW24478.1| putative 30S ribosomal protein S3 [Bacteroides fragilis 638R] gi|313138256|gb|EFR55616.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12] Length = 244 Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSK 220 >gi|150025401|ref|YP_001296227.1| 30S ribosomal protein S3 [Flavobacterium psychrophilum JIP02/86] gi|189045008|sp|A6GZ93|RS3_FLAPJ RecName: Full=30S ribosomal protein S3 gi|149771942|emb|CAL43416.1| 30S ribosomal protein S3 [Flavobacterium psychrophilum JIP02/86] Length = 253 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 150/212 (70%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G++YG + ED KIR+Y+ L +A V+K++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKIAEDYKIRKYIHARLSKASVSKVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKVTDKEVQINIFEIKRPELDAFLVATSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +Q+E R+ +RRA+K A+ ++MR A+G+KV+ SGRLNGAE++R+E + EGRVPL T RA Sbjct: 120 CRQIESRISYRRAIKMAIAASMRMNAEGIKVLISGRLNGAEMARSEGFKEGRVPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG GIKV++ + D Sbjct: 180 DIDYALAEAHTTYGRMGIKVWIMKGEVYGKRD 211 >gi|218440629|ref|YP_002378958.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7424] gi|226697694|sp|B7KHZ3|RS3_CYAP7 RecName: Full=30S ribosomal protein S3 gi|218173357|gb|ACK72090.1| ribosomal protein S3 [Cyanothece sp. PCC 7424] Length = 240 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 103/228 (45%), Positives = 146/228 (64%), Gaps = 2/228 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ SRWFA Y LL ED KIR+Y++ +L AG++ I IER Sbjct: 1 MGQKIHPVGFRLGITKEHKSRWFADKYHYPELLQEDRKIRQYVEKNLSNAGISDIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 I +++ARPG+++G+ G+ IE +R L N + +I ++V EV + + +ATLIA+ Sbjct: 61 ADQVDIEIHTARPGVVVGRGGSGIEALRVGLQNALGGHRQIRINVVEVARVDADATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKVQVSGRLNGAEIARTEWIREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 RA ID+ A+T YG G+K++V + + + PA ++ Sbjct: 181 RADIDFAYRTAKTIYGILGVKIWVFKGEIIPGQEEQAPAQPATTPKRQ 228 >gi|269925837|ref|YP_003322460.1| ribosomal protein S3 [Thermobaculum terrenum ATCC BAA-798] gi|269789497|gb|ACZ41638.1| ribosomal protein S3 [Thermobaculum terrenum ATCC BAA-798] Length = 226 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 99/224 (44%), Positives = 151/224 (67%), Gaps = 2/224 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K+NPI FRLG TW SRWFA Y LHED+KIR + L AG++ ++I R+ Sbjct: 1 MGRKVNPIGFRLGGIKTWESRWFAE-RNYTQQLHEDIKIRSTVFNRLSNAGISHVVISRS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + VY+A+PG++IGK G ++ +R +L NMT ++ L++ EV +PE++A L+A SI Sbjct: 60 GDDLNVTVYTAKPGVVIGKGGATVDALRTELENMTGKKVTLNIEEVRQPELDAQLVADSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG-AELSRTECYLEGRVPLQTLR 179 A+Q+ +RV ++RAMK+AVQ AMR GA G+K+ SG + G + +SR+ ++GRVPLQT+R Sbjct: 120 AEQISKRVSYKRAMKQAVQRAMRAGAKGIKIRVSGLVGGPSSMSRSIVEIDGRVPLQTIR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 A IDY A T G G+KV++ D + +++++ AA +V Sbjct: 180 ADIDYAQVHAYTPGGRIGVKVWIYKGDVLPEAETSGQAATTELV 223 >gi|228472293|ref|ZP_04057059.1| ribosomal protein S3 [Capnocytophaga gingivalis ATCC 33624] gi|228276496|gb|EEK15220.1| ribosomal protein S3 [Capnocytophaga gingivalis ATCC 33624] Length = 243 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 147/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHTRLAKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + ++RPG IIGK G +++K+R++L +T +I +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTSRPGSIIGKGGQEVDKLREELKKITGKDIQINIFEIKRPELDAPLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARNESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY T A T YG GIKV++ + EV P Sbjct: 180 DIDYATDEAHTTYGRMGIKVWIM-KGEVYGKRELSP 214 >gi|313891562|ref|ZP_07825172.1| ribosomal protein S3 [Dialister microaerophilus UPII 345-E] gi|313120021|gb|EFR43203.1| ribosomal protein S3 [Dialister microaerophilus UPII 345-E] Length = 249 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 104/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+GV WNS+WFA Y A L ED KIR++L+ HL AG++KI I+R Sbjct: 1 MGQKVNPHGMRVGVINDWNSKWFAE-KNYAAQLVEDTKIRQFLKKHLFVAGISKIGIKRV 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I +Y+A+PG++IG+ GT IE I+K L +T+ EI + + E+ +++A L+ ++I Sbjct: 60 GNRVKIAIYTAKPGMVIGRGGTGIEDIKKALKIVTDKEIDIDILEIKSSDLSAILVGENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLERR+ FRRA+K+AV MR GA GVKV SGRL GAE++ +E Y EG +PLQTLRA Sbjct: 120 ASQLERRIGFRRAVKQAVGRTMRSGAKGVKVTVSGRLGGAEIAHSESYREGSIPLQTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 +IDYG +VA T +G+ GIKV++ + Sbjct: 180 NIDYGVSVAHTTFGAIGIKVWIYKGELAPGQMVDEAE 216 >gi|162446963|ref|YP_001620095.1| 30S ribosomal protein S3 [Acholeplasma laidlawii PG-8A] gi|189044988|sp|A9NED9|RS3_ACHLI RecName: Full=30S ribosomal protein S3 gi|161985070|gb|ABX80719.1| small subunit ribosomal protein S3 [Acholeplasma laidlawii PG-8A] Length = 256 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W+A + AL+ ED IRE+L + +AGV++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESKWYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+ Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSTLEYLTKKEVILNIIEVRRPEKVAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA +DY TA A+T YG GIKV++ + + Sbjct: 181 TLRADVDYATAEAKTTYGILGIKVWIYHGEVLPGQ 215 >gi|299141153|ref|ZP_07034290.1| ribosomal protein S3 [Prevotella oris C735] gi|298577113|gb|EFI48982.1| ribosomal protein S3 [Prevotella oris C735] Length = 241 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 147/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDCKIRKYLNERLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T G GIKV++ + + T + + Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQ 221 >gi|145219067|ref|YP_001129776.1| 30S ribosomal protein S3 [Prosthecochloris vibrioformis DSM 265] gi|145205231|gb|ABP36274.1| SSU ribosomal protein S3P [Chlorobium phaeovibrioides DSM 265] Length = 251 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 152/226 (67%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+Q LK +AG+A+I+IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDQVIRNYVQTRLKREKAGIARIIIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT+KN RI +Y+ARPG ++G+KG +I + ++L +T E+ + V EV KPEI + LI + Sbjct: 61 RTNKNIRINIYAARPGAVVGRKGEEINNLSQELGRITGKEVKIDVVEVVKPEIESQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q+AMR GA+GV++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQTAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA++DY + A T G+ GIKV+V + + I E + ++ Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEEEMKRIK 226 >gi|224023624|ref|ZP_03641990.1| hypothetical protein BACCOPRO_00331 [Bacteroides coprophilus DSM 18228] gi|224016846|gb|EEF74858.1| hypothetical protein BACCOPRO_00331 [Bacteroides coprophilus DSM 18228] Length = 244 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+K++ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKILISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A T G GIKV++ + D + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRDLAPNFTQSKETSR 224 >gi|320108390|ref|YP_004183980.1| 30S ribosomal protein S3 [Terriglobus saanensis SP1PR4] gi|319926911|gb|ADV83986.1| ribosomal protein S3 [Terriglobus saanensis SP1PR4] Length = 222 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 102/214 (47%), Positives = 147/214 (68%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLGVN W SRWF + LL ED+K++ L+ LK AGV+ + IER Sbjct: 1 MGQKVHPYGFRLGVNKPWKSRWFVE-RGFDKLLVEDVKLKAELREKLKAAGVSSVEIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I+ +ARPG+IIG+KG +I+K++ + T+ E+ + + EV KPE++A L++++I Sbjct: 60 GNKLRLIIKTARPGIIIGRKGAEIDKLKADIQKRTSREVFIDILEVNKPELDAQLVSENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 IDYG + A T +G G+K +V + Sbjct: 180 DIDYGFSEAHTTFGIIGVKTWVYKGEIYEQKKRR 213 >gi|295099231|emb|CBK88320.1| SSU ribosomal protein S3P [Eubacterium cylindroides T2-87] Length = 273 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 14/240 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK++PI R+GV W SRW+A E+G LL ED+KIRE+++ + + Sbjct: 1 MGQKVSPIGMRVGVIRDWQSRWYADDKEFGTLLMEDVKIREFIESYYAKLSNEAQDKRKA 60 Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVP 107 +++I IERT +I+ +A PG++IG+ G IE ++KK+ M + + ++V EV Sbjct: 61 DPQISRIEIERTKGRMTVIIRTAHPGVVIGQDGKSIEGLKKKIEKMASAKNVQINVVEVA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P ++A L+A+ IA +LE R FR K+A+Q+ MR GA G+K SGRL GA+++RTE Sbjct: 121 NPNLDARLVARWIANELEARKSFRATQKKAIQNTMRAGAKGIKTAVSGRLGGADMARTEG 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH-RVVEKD 226 Y EG VPL TLR+ IDY A T YG G+KV++ + + P A R + K Sbjct: 181 YSEGVVPLHTLRSDIDYAWEEASTTYGRLGVKVWICRGEVLPGEMVKEPEAPKQRPMRKG 240 >gi|19704960|ref|NP_602455.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|34764032|ref|ZP_00144918.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237739372|ref|ZP_04569853.1| SSU ribosomal protein S3P [Fusobacterium sp. 2_1_31] gi|237742666|ref|ZP_04573147.1| SSU ribosomal protein S3P [Fusobacterium sp. 4_1_13] gi|237743905|ref|ZP_04574386.1| SSU ribosomal protein S3P [Fusobacterium sp. 7_1] gi|256027484|ref|ZP_05441318.1| SSU ribosomal protein S3P [Fusobacterium sp. D11] gi|256846061|ref|ZP_05551519.1| ribosomal protein S3 [Fusobacterium sp. 3_1_36A2] gi|260495197|ref|ZP_05815325.1| ribosomal protein S3 [Fusobacterium sp. 3_1_33] gi|289765446|ref|ZP_06524824.1| SSU ribosomal protein S3P [Fusobacterium sp. D11] gi|294784808|ref|ZP_06750096.1| ribosomal protein S3 [Fusobacterium sp. 3_1_27] gi|296329214|ref|ZP_06871715.1| 30S ribosomal protein S3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|27734504|sp|Q8RIG1|RS3_FUSNN RecName: Full=30S ribosomal protein S3 gi|19712862|gb|AAL93754.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|27886196|gb|EAA23486.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229422980|gb|EEO38027.1| SSU ribosomal protein S3P [Fusobacterium sp. 2_1_31] gi|229430314|gb|EEO40526.1| SSU ribosomal protein S3P [Fusobacterium sp. 4_1_13] gi|229432936|gb|EEO43148.1| SSU ribosomal protein S3P [Fusobacterium sp. 7_1] gi|256719620|gb|EEU33175.1| ribosomal protein S3 [Fusobacterium sp. 3_1_36A2] gi|260197254|gb|EEW94773.1| ribosomal protein S3 [Fusobacterium sp. 3_1_33] gi|289717001|gb|EFD81013.1| SSU ribosomal protein S3P [Fusobacterium sp. D11] gi|294486522|gb|EFG33884.1| ribosomal protein S3 [Fusobacterium sp. 3_1_27] gi|296153570|gb|EFG94387.1| 30S ribosomal protein S3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 219 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRAKLEKLTGKKVTVKVQEIKDLNGDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 RA IDY A A T YG+ GIKV++ + + A Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219 >gi|288925709|ref|ZP_06419641.1| ribosomal protein S3 [Prevotella buccae D17] gi|315606498|ref|ZP_07881513.1| 30S ribosomal protein S3 [Prevotella buccae ATCC 33574] gi|288337647|gb|EFC76001.1| ribosomal protein S3 [Prevotella buccae D17] gi|315251904|gb|EFU31878.1| 30S ribosomal protein S3 [Prevotella buccae ATCC 33574] Length = 242 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 148/220 (67%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G + ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNIVEDQKIRKYLNERLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ + EI +++ EV KPE++AT++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNIFDKEIQINIFEVKKPELDATIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV SGRLNGAE++R E EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRAGAEGIKVQISGRLNGAEIARKEMLKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A A T G GIKV++ + D T + Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGKRDLTPNFTQD 219 >gi|332042714|gb|EGI78914.1| ribosomal protein S3 [Lacinutrix algicola 5H-3-7-4] Length = 240 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 147/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ SI Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDAFLVGTSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSEHYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|60117156|ref|YP_209490.1| ribosomal protein S3 [Huperzia lucidula] gi|68052893|sp|Q5SD19|RR3_HUPLU RecName: Full=30S ribosomal protein S3, chloroplastic gi|50659964|gb|AAT80686.1| ribosomal protein S3 [Huperzia lucidula] Length = 219 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 84/219 (38%), Positives = 127/219 (57%), Gaps = 12/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ NS WFA+ + Y L ED K+R + ++ + GV Sbjct: 1 MGQKINPLGFRLGITKNHNSHWFAKPNNYSEFLQEDRKVRNCIDNYVHRHVKNSSNYGGV 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS----NMTNSEIHLSVNEVPK 108 A++ I+R + +++ P L++ G IE+IRK + + +H++ E+ K Sbjct: 61 ARVEIQRKTDLILVEIHTGFPALLVESHGQGIEQIRKDVQQNLLDSKIRRVHVTSTEIAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FRR +++A++ A G+K+ +GRLNG E++R E Sbjct: 121 PYGEPNILAEYIAIQLENRVAFRRTIRKAIELAKETDIKGIKIQIAGRLNGTEIARVEWA 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA IDY A+T YG GIK+++ +E Sbjct: 181 REGRVPLQTLRAQIDYCYYPAQTIYGVLGIKIWIFRDEE 219 >gi|159028200|emb|CAO89807.1| rpsC [Microcystis aeruginosa PCC 7806] Length = 242 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 2/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLGV S W+A Y L+ ED +IR Y++ +L AG+A I IER Sbjct: 1 MGQKIHPLGFRLGVIKDHKSCWYADAKRYPELVQEDRRIRNYVEKNLANAGIADIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 I +++ARPG+++G+ GT IE++R L +I ++V EV + + +A LIA+ Sbjct: 61 ADQVDISIHTARPGVVVGRGGTGIEQLRLGLQKALGGQRQIRINVIEVARVDADANLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 RA IDY A T YG G+KV++ + + + A Sbjct: 181 RADIDYSYKTASTIYGILGVKVWIFKGEIIPGQEEIAAAV 220 >gi|254303414|ref|ZP_04970772.1| ribosomal protein S3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323606|gb|EDK88856.1| ribosomal protein S3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 219 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRTKLEKLTGKKVTVKVQEIKDLNGDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 RA IDY A A T YG+ GIKV++ + + A Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219 >gi|34541535|ref|NP_906014.1| 30S ribosomal protein S3 [Porphyromonas gingivalis W83] gi|188995726|ref|YP_001929978.1| 30S ribosomal protein S3 [Porphyromonas gingivalis ATCC 33277] gi|61215670|sp|Q7MTL9|RS3_PORGI RecName: Full=30S ribosomal protein S3 gi|226697744|sp|B2RLY6|RS3_PORG3 RecName: Full=30S ribosomal protein S3 gi|34397852|gb|AAQ66913.1| ribosomal protein S3 [Porphyromonas gingivalis W83] gi|188595406|dbj|BAG34381.1| 30S ribosomal protein S3 [Porphyromonas gingivalis ATCC 33277] Length = 246 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 152/216 (70%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ RLG+ W+S W+ G +YG L ED +IR+YL L +A V++I+IER Sbjct: 1 MGQKINPVSNRLGIIRGWDSNWY-GGRKYGETLLEDSRIRQYLNARLAKASVSRIVIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG+IIGK G +++K++++L +T ++ +++ E+ KPE++A ++A++I Sbjct: 60 LKLVTITICTARPGMIIGKAGQEVDKLKEELKRITKKDVQINIYEIRKPELDAAIVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE ++ +RRA+K A+ SAMR GA+G+K+ SGRLNGAE++R+E + EGR PL TLRA Sbjct: 120 ARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A A T G GIKV++ + EV + P Sbjct: 180 DIDYALAEALTKVGLLGIKVWIC-KGEVYEKRDLAP 214 >gi|126657994|ref|ZP_01729146.1| 30S ribosomal protein S3 [Cyanothece sp. CCY0110] gi|126620632|gb|EAZ91349.1| 30S ribosomal protein S3 [Cyanothece sp. CCY0110] Length = 241 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 101/230 (43%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV S W+A Y LL EDL IR+Y++ +L AG+A I I+R Sbjct: 1 MGQKIHPIGFRLGVTKEHKSCWYADKRRYPELLQEDLAIRQYVEKNLSNAGIADIRIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQQTLGENRQIRINVIEVSRVDADAALIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225 RA IDY A+T YG G+KV+V + + D PA R + Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQDEQAMAAPAPTPRKKRR 230 >gi|317503974|ref|ZP_07961982.1| 30S ribosomal protein S3 [Prevotella salivae DSM 15606] gi|315665000|gb|EFV04659.1| 30S ribosomal protein S3 [Prevotella salivae DSM 15606] Length = 241 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 100/223 (44%), Positives = 148/223 (66%), Gaps = 1/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDRKIRKYLNERLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 IDY A T G GIKV++ + + T + + V Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQV 222 >gi|332178461|gb|AEE14150.1| ribosomal protein S3 [Thermodesulfobium narugense DSM 14796] Length = 245 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 143/210 (68%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ + WFA S +G L +D KIR++++ L A V+K+LIER Sbjct: 1 MGQKVHPNGLRVGITKDHITHWFAPKSNFGPDLVQDFKIRQFIKKELSSAFVSKVLIERR 60 Query: 61 H----KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + ++IV +ARPG++IG+ G E +RKKL + S I + V ++P P+++A LI Sbjct: 61 GSKGQEKIKVIVRTARPGMVIGRGGQGREILRKKLVDEFKSNIEVDVEDIPVPDLDAQLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+++A Q+E+RV FRRAMK+A+ A R GA G+K++ GRL GAE++R+E EGRVPLQ Sbjct: 121 AENVASQIEKRVTFRRAMKQAIFRARRSGAKGIKIMVGGRLGGAEVARSEWLREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDYG A A T YG G+KV++ + D Sbjct: 181 TLRADIDYGFAEAHTIYGIIGVKVWLYVND 210 >gi|305665131|ref|YP_003861418.1| putative 30S ribosomal protein S3 [Maribacter sp. HTCC2170] gi|88709883|gb|EAR02115.1| putative 30S ribosomal protein S3 [Maribacter sp. HTCC2170] Length = 239 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 102/216 (47%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + V +ARPG+IIGK G +++K++++L +TN E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLITVTVTTARPGIIIGKGGQEVDKLKEELKKITNKEVQINIYEIKRPEVDANLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ FRRA+K ++ +AMR A+G+KV SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIESRISFRRAIKMSIAAAMRMNAEGIKVQISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|124112119|ref|YP_001019089.1| ribosomal protein S3 [Chlorokybus atmophyticus] gi|152060532|sp|Q19VB0|RR3_CHLAT RecName: Full=30S ribosomal protein S3, chloroplastic gi|124012226|gb|ABD62251.2| ribosomal protein S3 [Chlorokybus atmophyticus] Length = 217 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 139/213 (65%), Gaps = 2/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ S WFA+ ++Y LL ED IR +L+ L AG+A+I I+R Sbjct: 1 MGQKIHPLGFRLGITQDHRSHWFAKPAQYRQLLQEDNSIRNFLRTKLINAGIARIDIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK--LSNMTNSEIHLSVNEVPKPEINATLIAQ 118 I V +ARPGLI+G+ G +E + + +++ +P+P++ +TLIA+ Sbjct: 61 ADQVEIEVRTARPGLIVGRSGKGVENLLRDLQEQFKNKRRFRITITYIPEPDLESTLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQ+LE R FRRAM++A+Q A R G +G+K+ +GRLNGAE++R+E EGRVPLQTL Sbjct: 121 FIAQRLEARAPFRRAMRQAIQRATRAGVEGIKIQVAGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 RA+IDY A+T YG GIKV++ ++ S Sbjct: 181 RANIDYSYCQAKTIYGILGIKVWMFKGEKFSSK 213 >gi|291296985|ref|YP_003508383.1| 30S ribosomal protein S3 [Meiothermus ruber DSM 1279] gi|290471944|gb|ADD29363.1| ribosomal protein S3 [Meiothermus ruber DSM 1279] Length = 253 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 1/213 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP+ RLG+ + SRW+A Y L ED IR ++ L QAG+A+I IER Sbjct: 1 MGNKINPVGLRLGITRDFESRWYAGKKAYAKTLEEDRLIRALIEKELHQAGLARIDIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 N ++VY+A+PG++IG+ G I+++R+ S + L+V EV P ++A L+AQ Sbjct: 61 ADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRFPGKTVALNVQEVGNPNLSAPLVAQR 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+Q+ERR RR++K+AVQ GA G K++ SGR+ GAE +R E EGRVPL TLR Sbjct: 121 VAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRIGGAEQARVEWAAEGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 A+IDYGTA AET YGS G+K YV + + + Sbjct: 181 ANIDYGTARAETTYGSLGVKAYVFMGEVIGGKK 213 >gi|206895537|ref|YP_002247329.1| ribosomal protein S3 [Coprothermobacter proteolyticus DSM 5265] gi|226697689|sp|B5Y982|RS3_COPPD RecName: Full=30S ribosomal protein S3 gi|206738154|gb|ACI17232.1| ribosomal protein S3 [Coprothermobacter proteolyticus DSM 5265] Length = 234 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 92/227 (40%), Positives = 149/227 (65%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLGV W SRW A +Y + +D KIR + H AG++ + IER Sbjct: 1 MGQKIHPYGFRLGVTKNWRSRWVAPFEKYPEYIVQDEKIRTLINKHYGHAGISSVEIERL 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIAQ 118 R+I+++ARPG+IIGK+G +IE++R+++ + ++ + +++ EV PE +A +++ Sbjct: 61 GNKMRVIIWTARPGMIIGKQGAEIERLREEIVKLLKNDYEVRIAIYEVKNPETDAQIVSD 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 SIA+Q+ERRV ++RAMK+A+ AMR GA G+K+ SGRL GAE++R E +++G++PL TL Sbjct: 121 SIARQIERRVSYKRAMKQAISRAMRSGAQGIKIAVSGRLGGAEIARREWFVQGKLPLSTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 ++ +DYG ++A T YG+ G+K ++ D + P R + Sbjct: 181 KSDVDYGYSIAVTKYGTIGVKCWIYKGDVEDLQELLPPRGLERAERR 227 >gi|167752391|ref|ZP_02424518.1| hypothetical protein ALIPUT_00635 [Alistipes putredinis DSM 17216] gi|167660632|gb|EDS04762.1| hypothetical protein ALIPUT_00635 [Alistipes putredinis DSM 17216] Length = 263 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 143/212 (67%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSEKLVEDAKIRKYLNVRLAKASISKIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ +++ EV +PE++A ++ Q+I Sbjct: 60 LKLVTVTIATARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIFEVKRPEVDAVIVGQNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA+K A+ S MR GA+G+KV SGR+ GAE++R+E EGR+PL T RA Sbjct: 120 ARQLEGRVSFRRAVKTAIASTMRMGAEGIKVQVSGRVGGAEMARSETMKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T G G+KV++ D Sbjct: 180 DIDYCLTEALTKVGILGVKVWICQGTVYGKRD 211 >gi|170077679|ref|YP_001734317.1| 30S ribosomal protein S3 [Synechococcus sp. PCC 7002] gi|226697767|sp|B1XJT3|RS3_SYNP2 RecName: Full=30S ribosomal protein S3 gi|169885348|gb|ACA99061.1| ribosomal protein S3 [Synechococcus sp. PCC 7002] Length = 240 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 148/229 (64%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ SRW+A +Y AL+ ED KIR+++ +L AG++K+LIER Sbjct: 1 MGQKIHPVGFRLGITKEHLSRWYADPKQYPALVQEDYKIRQHIDANLNNAGISKVLIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE +R L ++ +I ++V EV + + +A LIA+ Sbjct: 61 ADQVDLEIHTARPGVVVGRGGSGIEALRTGLQDVLGDQRQIRINVVEVNRVDADAALIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++AVQ A R G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIVQQLERRVSFRRVVRQAVQRAQRAEVQGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 RA IDY A+T YG GIKV++ + + + T A + + S Sbjct: 181 RADIDYSYKTAQTIYGILGIKVWIFKGEIIPGQEETSAANAAPLPRRKS 229 >gi|119358185|ref|YP_912829.1| 30S ribosomal protein S3 [Chlorobium phaeobacteroides DSM 266] gi|152060855|sp|A1BJ28|RS3_CHLPD RecName: Full=30S ribosomal protein S3 gi|119355534|gb|ABL66405.1| SSU ribosomal protein S3P [Chlorobium phaeobacteroides DSM 266] Length = 250 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 102/227 (44%), Positives = 150/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+Q LK +AG+A+I+IE Sbjct: 1 MGQKVNPNGFRLGIIRDWTSRWYDDSPVIAEKIKQDHVIRNYVQARLKREKAGIARIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPE A LI + Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVIKPETEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA++DY + A T G+ GIKV+V + + I E + + + Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRINE 227 >gi|299830605|ref|YP_003735053.1| 30S ribosomal protein S3 [Durinskia baltica] gi|297384969|gb|ADI40268.1| 30S ribosomal protein S3 [Durinskia baltica] Length = 214 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 136/212 (64%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A ++Y ++L ED KIR Y+ K ++ + I R Sbjct: 1 MGQKTHPLGFRLGITQEHKSTWYANFNQYASVLEEDDKIRTYINSIAKTNNISNLNISRN 60 Query: 61 H--KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 ++ + + +PG+++G+ G+ +E + L + +N ++ + V EV K +++A L+ Sbjct: 61 GLNDQIQVTIETGKPGILVGELGSGLETVLSNLKKILPSNRQVTIKVFEVEKVDLDAKLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T+ A T YG GIKV++ + + Sbjct: 181 TLRADIDYATSEANTIYGVLGIKVWLFRNEIL 212 >gi|159901432|ref|YP_001547679.1| 30S ribosomal protein S3 [Herpetosiphon aurantiacus ATCC 23779] gi|159894471|gb|ABX07551.1| ribosomal protein S3 [Herpetosiphon aurantiacus ATCC 23779] Length = 230 Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 91/215 (42%), Positives = 141/215 (65%), Gaps = 3/215 (1%) Query: 6 NPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIERTHKN 63 +P FRLG+ W S+WFA Y LH+DL +R+Y++ LK AGVA + IER+ Sbjct: 2 HPNGFRLGIIKDWKSKWFAE-RNYTEQLHQDLALRKYIEGADELKNAGVALVDIERSANR 60 Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 + +++A+PG++IGK+G +++ ++ ++ +T ++ L++ E+ +PE+NA L+A+S+A+Q Sbjct: 61 VEVTIHTAKPGIVIGKRGANVDTLKNQIEKLTGKKVRLNIQEIHQPELNAYLVAESVAEQ 120 Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183 + +RV +RAMK+A Q AMR GA G+KV SGRL GAE+SR+ EGRVPL T+RA ID Sbjct: 121 ISKRVSHKRAMKQATQRAMRLGAQGIKVKCSGRLGGAEMSRSLWEREGRVPLHTIRADID 180 Query: 184 YGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 Y A T YG G+KV++ D + + A Sbjct: 181 YALVHAHTTYGRIGVKVWIYKGDVLGQRERQSATA 215 >gi|326334539|ref|ZP_08200750.1| 30S ribosomal protein S3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693308|gb|EGD35236.1| 30S ribosomal protein S3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 242 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 147/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHTRLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGSIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAPLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEVYGKRELSP 214 >gi|110639529|ref|YP_679738.1| 30S ribosomal protein S3 [Cytophaga hutchinsonii ATCC 33406] gi|123354299|sp|Q11QB8|RS3_CYTH3 RecName: Full=30S ribosomal protein S3 gi|110282210|gb|ABG60396.1| SSU ribosomal protein S3P [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 145/212 (68%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV W S W+ G + L ED +IR+Y+ + + G++KI+IERT Sbjct: 1 MGQKVNPIGFRLGVVKGWESNWY-GGKTFADKLVEDEQIRKYVLARIPKGGISKIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE+ A L+ +SI Sbjct: 60 IKRVTLTINTARPGVVIGKGGAEVDKIKEELKKITGKDVQINIFEIKRPEMEALLVGESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL+ R+ +RRAMK+A+ MR GA G+K+ SGRL GAE++RT+ Y EGR+PL TLRA Sbjct: 120 AQQLKARISYRRAMKQAIAGTMRVGALGIKIKLSGRLGGAEMARTDQYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY + A T YG GIKV++ + D Sbjct: 180 DIDYAVSEALTVYGKIGIKVWIFKGEVYGKRD 211 >gi|218245134|ref|YP_002370505.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 8801] gi|257058159|ref|YP_003136047.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 8802] gi|226697695|sp|B7K329|RS3_CYAP8 RecName: Full=30S ribosomal protein S3 gi|218165612|gb|ACK64349.1| ribosomal protein S3 [Cyanothece sp. PCC 8801] gi|256588325|gb|ACU99211.1| ribosomal protein S3 [Cyanothece sp. PCC 8802] Length = 241 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 137/215 (63%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ S W+A Y L ED +IR+Y+ +L AG++ I IER Sbjct: 1 MGQKIHPIGFRLGITADHKSCWYADSKRYPETLQEDRQIRQYITKNLSNAGISDIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQVDLAIHTARPGVVVGRGGSGIEQLRLGLQQDLGGNRQIRINVIEVQRVDADAMLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 RA IDY A+T YG G+KV+V + + + Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQEE 215 >gi|325269529|ref|ZP_08136145.1| 30S ribosomal protein S3 [Prevotella multiformis DSM 16608] gi|324988148|gb|EGC20115.1| 30S ribosomal protein S3 [Prevotella multiformis DSM 16608] Length = 242 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 147/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGDNLVEDRKIRTYLNKRLEKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AV + MR GA+GVK+ +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAVANTMRAGAEGVKIQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T G GIKV++ + + D T A+ + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFAQEK 220 >gi|172038933|ref|YP_001805434.1| 30S ribosomal protein S3 [Cyanothece sp. ATCC 51142] gi|254764526|sp|B1WQR6|RS3_CYAA5 RecName: Full=30S ribosomal protein S3 gi|171700387|gb|ACB53368.1| 30S ribosomal protein S3 [Cyanothece sp. ATCC 51142] Length = 241 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 102/230 (44%), Positives = 142/230 (61%), Gaps = 5/230 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV S W+A Y LL EDL IR++++ +L AG+A I IER Sbjct: 1 MGQKIHPIGFRLGVTKEHKSCWYADKRRYPELLQEDLAIRQHVEKNLSNAGIADIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQQTLGENRQIRINVIEVSRVDADAALIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++RTE EGRVPL TL Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARTEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225 RA IDY A+T YG G+KV+V + + D PA R + Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQDEQAMAAPAPTPRKKRR 230 >gi|47093991|ref|ZP_00231725.1| ribosomal protein S3 [Listeria monocytogenes str. 4b H7858] gi|47017652|gb|EAL08451.1| ribosomal protein S3 [Listeria monocytogenes str. 4b H7858] Length = 209 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 139/210 (66%), Gaps = 1/210 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER I ++ Sbjct: 1 MRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIH 59 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV Sbjct: 60 TAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVS 119 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEA 179 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 +T YG G+KV++ + + + + + Sbjct: 180 DTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 209 >gi|262066298|ref|ZP_06025910.1| ribosomal protein S3 [Fusobacterium periodonticum ATCC 33693] gi|294783636|ref|ZP_06748960.1| ribosomal protein S3 [Fusobacterium sp. 1_1_41FAA] gi|291379993|gb|EFE87511.1| ribosomal protein S3 [Fusobacterium periodonticum ATCC 33693] gi|294480514|gb|EFG28291.1| ribosomal protein S3 [Fusobacterium sp. 1_1_41FAA] Length = 219 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRAKLEKLTAKKVTVKVQEIKDLNGDAVLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 RA IDY A A T YG+ GIKV++ + + A Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219 >gi|237725879|ref|ZP_04556360.1| 30S ribosomal protein S3 [Bacteroides sp. D4] gi|229435687|gb|EEO45764.1| 30S ribosomal protein S3 [Bacteroides dorei 5_1_36/D4] Length = 242 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220 >gi|325954998|ref|YP_004238658.1| ribosomal protein S3 [Weeksella virosa DSM 16922] gi|323437616|gb|ADX68080.1| ribosomal protein S3 [Weeksella virosa DSM 16922] Length = 240 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G++YG + ED K+R+YL+ L +AGV++I I+RT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDRIAEDAKVRKYLRARLSKAGVSRIYIDRT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + V +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ SI Sbjct: 60 FKLVTVTVTTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDAILVGDSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ SAMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAMTSAMRMNAEGIKIQISGRLNGAEMARSETYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY + A T YG GIKV++ + + + + K S Sbjct: 180 DIDYHISEAHTTYGRLGIKVWIMKGEVYGKRELSPLVGLQKKQNKRS 226 >gi|150003381|ref|YP_001298125.1| 30S ribosomal protein S3 [Bacteroides vulgatus ATCC 8482] gi|212695299|ref|ZP_03303427.1| hypothetical protein BACDOR_04839 [Bacteroides dorei DSM 17855] gi|237711679|ref|ZP_04542160.1| 30S ribosomal protein S3 [Bacteroides sp. 9_1_42FAA] gi|254881328|ref|ZP_05254038.1| 30S ribosomal protein S3 [Bacteroides sp. 4_3_47FAA] gi|265753099|ref|ZP_06088668.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_33FAA] gi|294777827|ref|ZP_06743271.1| ribosomal protein S3 [Bacteroides vulgatus PC510] gi|319640330|ref|ZP_07995055.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_40A] gi|189044951|sp|A6KYI9|RS3_BACV8 RecName: Full=30S ribosomal protein S3 gi|149931805|gb|ABR38503.1| 30S ribosomal protein S3 [Bacteroides vulgatus ATCC 8482] gi|212662209|gb|EEB22783.1| hypothetical protein BACDOR_04839 [Bacteroides dorei DSM 17855] gi|229454374|gb|EEO60095.1| 30S ribosomal protein S3 [Bacteroides sp. 9_1_42FAA] gi|254834121|gb|EET14430.1| 30S ribosomal protein S3 [Bacteroides sp. 4_3_47FAA] gi|263236285|gb|EEZ21780.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_33FAA] gi|294448281|gb|EFG16837.1| ribosomal protein S3 [Bacteroides vulgatus PC510] gi|317388105|gb|EFV68959.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_40A] Length = 243 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 152/221 (68%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220 >gi|198273997|ref|ZP_03206529.1| hypothetical protein BACPLE_00133 [Bacteroides plebeius DSM 17135] gi|198273075|gb|EDY97344.1| hypothetical protein BACPLE_00133 [Bacteroides plebeius DSM 17135] Length = 243 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSK 220 >gi|189460690|ref|ZP_03009475.1| hypothetical protein BACCOP_01337 [Bacteroides coprocola DSM 17136] gi|189432649|gb|EDV01634.1| hypothetical protein BACCOP_01337 [Bacteroides coprocola DSM 17136] Length = 243 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV KPE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKKPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A A T G GIKV++ + + + + Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSK 220 >gi|11467774|ref|NP_050825.1| ribosomal protein S3 [Nephroselmis olivacea] gi|27734487|sp|Q9TL20|RR3_NEPOL RecName: Full=30S ribosomal protein S3, chloroplastic gi|5880703|gb|AAD54796.1|AF137379_19 ribosomal protein S3 [Nephroselmis olivacea] Length = 221 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 3/219 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ S WFA Y + +HE+ ++R+YL+ L AGVA + + R Sbjct: 1 MGQKIHPLGFRLGITQQHRSTWFAPRKLYVSWIHEERQLRDYLKTRLADAGVANVQLTRQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 + +++A PG I+G+ G +E +R+ + + + V E+ P+ A LI Sbjct: 61 SDRIEVEIHTACPGAIVGRTGQGLEILREDIQKRLPKVRRVIVHVVEIANPDAQAVLIGG 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE R+ FRRA+++AVQ AMR G +G+K+ SGRLNGAE++R+E EGRVPL T Sbjct: 121 IIAKQLEERIPFRRAVRQAVQRAMRAPGVEGIKIEVSGRLNGAEIARSEWVREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 LRA +DY A+T YG GIKV++ + P Sbjct: 181 LRADVDYCDCTAQTIYGVLGIKVWIFRGEIRPVRQVLAP 219 >gi|226968672|ref|YP_002808632.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299] gi|226431150|gb|ACO55556.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299] Length = 211 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 92/208 (44%), Positives = 136/208 (65%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+GV T S+WFA+ +Y L+ EDL IR+Y+ +L A ++++ I R Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLIIRDYVAKNLTDASISRVNISRQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK--KLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 I ++ARP ++G KG + K+R+ K + + L V + +PE++A IA+ Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALKAKLPAHRSVALYVTKTVQPEVDAVCIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE+R FRR +++A++SA + GA G+KV +GRLNGAE++R+E EGRVPL T+ Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQKAGAVGIKVQIAGRLNGAEIARSEWAREGRVPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDY TA A T YG GIKV+V D Sbjct: 181 SADIDYATARALTVYGILGIKVWVCKGD 208 >gi|284929567|ref|YP_003422089.1| 30S ribosomal protein S3P [cyanobacterium UCYN-A] gi|284810011|gb|ADB95708.1| SSU ribosomal protein S3P [cyanobacterium UCYN-A] Length = 240 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 99/232 (42%), Positives = 143/232 (61%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ SRW+A Y LL EDL +R++++ +L AG+A I IER Sbjct: 1 MGQKIHPIGFRLGITKEHKSRWYADKRRYPELLQEDLAVRKHIEKNLSNAGIADIRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+ Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTALQKNLGENRQIRINVIEVSRVDADAALIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS----TIPAAEHRVVEKD 226 RA IDY A+T YG G+KV+V + + + + P R K Sbjct: 181 RADIDYSYRTAQTTYGILGVKVWVFKGEIIPGQEEQTTTSAPPTPKRNRRKQ 232 >gi|281423833|ref|ZP_06254746.1| ribosomal protein S3 [Prevotella oris F0302] gi|281402060|gb|EFB32891.1| ribosomal protein S3 [Prevotella oris F0302] Length = 252 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 147/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT Sbjct: 12 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDCKIRKYLNERLAKASVSRIVIERT 70 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I Sbjct: 71 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 130 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 131 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 190 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T G GIKV++ + + T + + Sbjct: 191 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQ 232 >gi|307154836|ref|YP_003890220.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7822] gi|306985064|gb|ADN16945.1| ribosomal protein S3 [Cyanothece sp. PCC 7822] Length = 241 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ SRW+A Y LL ED KIR Y+ +L AG++ + IER Sbjct: 1 MGQKIHPVGFRLGITKEHKSRWYADKHNYPELLQEDRKIRSYIDANLSNAGISDVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIE--KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 I +++ARPG+++G+ G+ IE ++ + + + +I ++V EV + + +ATLIA+ Sbjct: 61 ADQVDIEIHTARPGVVVGRGGSGIESLRLGLQTALGGHRQIRINVIEVSRVDADATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKVQVSGRLNGAEIARTEWIREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 RA ID+ A+T YG G+KV+V + + + T Sbjct: 181 RADIDFSYRTAKTIYGILGVKVWVFKGEIIPGQEET 216 >gi|307565122|ref|ZP_07627630.1| 30S ribosomal protein S3 [Prevotella amnii CRIS 21A-A] gi|307346153|gb|EFN91482.1| 30S ribosomal protein S3 [Prevotella amnii CRIS 21A-A] Length = 245 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 148/227 (65%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A +++I IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGESLVEDRKIRAYLNKRLEKASISRIAIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KP+++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPDLDANIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+GVKV +GRLNGAE++R E + EGR PL TLRA Sbjct: 120 ARQVEGKIAYRRAIKMAIANVMRAGAEGVKVQIAGRLNGAEMARKEMFKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A T G GIKV++ + + + T + + + + Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYNKVELTPNFTQDKTSARSN 226 >gi|38426844|gb|AAR20467.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] gi|38426860|gb|AAR20475.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 216 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|260592759|ref|ZP_05858217.1| ribosomal protein S3 [Prevotella veroralis F0319] gi|288803939|ref|ZP_06409362.1| ribosomal protein S3 [Prevotella melaninogenica D18] gi|302345080|ref|YP_003813433.1| ribosomal protein S3 [Prevotella melaninogenica ATCC 25845] gi|325856065|ref|ZP_08171954.1| ribosomal protein S3 [Prevotella denticola CRIS 18C-A] gi|327313196|ref|YP_004328633.1| 30S ribosomal protein S3 [Prevotella denticola F0289] gi|260535290|gb|EEX17907.1| ribosomal protein S3 [Prevotella veroralis F0319] gi|288333572|gb|EFC72024.1| ribosomal protein S3 [Prevotella melaninogenica D18] gi|302150155|gb|ADK96417.1| ribosomal protein S3 [Prevotella melaninogenica ATCC 25845] gi|325483737|gb|EGC86701.1| ribosomal protein S3 [Prevotella denticola CRIS 18C-A] gi|326945970|gb|AEA21855.1| ribosomal protein S3 [Prevotella denticola F0289] Length = 242 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 100/221 (45%), Positives = 146/221 (66%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGDNLVEDRKIRTYLNKRLEKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K AV + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T G GIKV++ + + D T + + Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQEK 220 >gi|15639188|ref|NP_218634.1| 30S ribosomal protein S3 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025428|ref|YP_001933200.1| 30S ribosomal protein S3 [Treponema pallidum subsp. pallidum SS14] gi|6094180|sp|O83225|RS3_TREPA RecName: Full=30S ribosomal protein S3 gi|226697771|sp|B2S2E2|RS3_TREPS RecName: Full=30S ribosomal protein S3 gi|3322459|gb|AAC65180.1| ribosomal protein S3 (rpsC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018003|gb|ACD70621.1| ribosomal protein S3 [Treponema pallidum subsp. pallidum SS14] gi|291059602|gb|ADD72337.1| ribosomal protein S3 [Treponema pallidum subsp. pallidum str. Chicago] Length = 247 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 99/207 (47%), Positives = 141/207 (68%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH--LKQAGVAKILIE 58 MGQK++PI RLG+N W+SRW+A EY ALLHEDL+IR ++ K A +A++ I Sbjct: 1 MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIV 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + +++++ARPG++IG KG +IEKI ++ N ++ + V E+ + E+NA L+AQ Sbjct: 61 RHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++A+QL RV FR+ +++A M+ GA GVK+ SGRL GAE+SRTE EGR PL TL Sbjct: 121 NVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205 RA IDYG A A T YGS G+KV++ Sbjct: 181 RADIDYGFAEAHTTYGSIGVKVWLYSG 207 >gi|255994813|ref|ZP_05427948.1| ribosomal protein S3 [Eubacterium saphenum ATCC 49989] gi|255993526|gb|EEU03615.1| ribosomal protein S3 [Eubacterium saphenum ATCC 49989] Length = 300 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 144/226 (63%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+N W S+W+A + L ED IRE+++ L AGV+KILIER Sbjct: 1 MGQKVSPHGLRVGINKEWGSKWYADKKSFADFLAEDKAIREHVKTKLYGAGVSKILIERP 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 ++I+ R G++IGK G E I+K L+ +T E+ + + +V + E++A L A+ Sbjct: 61 AEDKVKVIIAVGRSGMVIGKGGDGHEAIKKSLAKLTGKEVAVDIRQVGRTELDAQLTAER 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+ LE+RV +RRAMK+A+ AM+ GA G+K++ SGRL GAE++R E Y EG VPL TLR Sbjct: 121 IAEDLEKRVSYRRAMKQAMGRAMKAGAKGIKLLVSGRLGGAEIARDEKYSEGNVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 + IDYG A A+T YG G+K++++ + + + E + K Sbjct: 181 SDIDYGFAEADTTYGKLGVKIWINHGEILDKGLQDLIREEKKDGRK 226 >gi|193214806|ref|YP_001996005.1| 30S ribosomal protein S3 [Chloroherpeton thalassium ATCC 35110] gi|193088283|gb|ACF13558.1| ribosomal protein S3 [Chloroherpeton thalassium ATCC 35110] Length = 266 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 96/227 (42%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--KQAGVAKILIE 58 MGQK+NP+ FRLGV W+SRW+ + + ED IR Y+ L ++AGVAK++IE Sbjct: 1 MGQKVNPVGFRLGVIKDWDSRWYDNTDKIAGKIKEDQVIRNYVITRLKRQKAGVAKVVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT KN R+ +Y+ARPG ++G+ G +I + ++L +T+ +I + V E+ +PE++A L+A Sbjct: 61 RTSKNVRLYIYAARPGAVVGRSGEEINTLAQELGKITSKDIKIDVIEIKRPELDAQLVAD 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE R+ FRRAMK+A+Q A R GA+G+++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIASQLEGRISFRRAMKQAIQQARRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA+IDY + T G+ GIKV++ + + + E + ++ Sbjct: 181 RANIDYAASTGFTITGTIGIKVWIYKGEILGQRIDMLEEEERQKAKE 227 >gi|189501648|ref|YP_001957365.1| 30S ribosomal protein S3 [Candidatus Amoebophilus asiaticus 5a2] gi|189497089|gb|ACE05636.1| ribosomal protein S3 [Candidatus Amoebophilus asiaticus 5a2] Length = 240 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 95/224 (42%), Positives = 148/224 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP R+G W S WF+ Y L ED KIR+YL + +A ++KI+IERT Sbjct: 1 MGQKVNPNSLRIGYIKGWESNWFSSKKGYADKLIEDHKIRKYLGARMAKANLSKIVIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V+S++PG+IIGK G ++E+I+++L +T E+H+++ E+ +PE++A L+ S+ Sbjct: 61 LKRITITVHSSKPGIIIGKGGAEVERIKEELRKLTEKEVHVNILEIKRPELDAKLVGSSM 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQ++ R+ ++R +K+A+ + MR GA G+K+ SGRL GAE++R+E + EGR+PL TLRA Sbjct: 121 AQQIQARISYKRVVKQALSATMRVGAQGIKIQVSGRLAGAEIARSEQFKEGRIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ID+ + A+T YG GIKV++ + D + A E Sbjct: 181 DIDFAISEAQTVYGKIGIKVWIFKGEVYQRPDLSSNATTATSSE 224 >gi|254495347|ref|ZP_05108271.1| 30S ribosomal protein S3 [Polaribacter sp. MED152] gi|85819701|gb|EAQ40858.1| 30S ribosomal protein S3 [Polaribacter sp. MED152] Length = 238 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 148/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG + ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKIAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDARLVATSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ ++RA+K A+ + MR A+G+K+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIENRISYKRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSEHFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|116490664|ref|YP_810208.1| SSU ribosomal protein S3P [Oenococcus oeni PSU-1] gi|290890080|ref|ZP_06553163.1| hypothetical protein AWRIB429_0553 [Oenococcus oeni AWRIB429] gi|122277152|sp|Q04G79|RS3_OENOB RecName: Full=30S ribosomal protein S3 gi|116091389|gb|ABJ56543.1| SSU ribosomal protein S3P [Oenococcus oeni PSU-1] gi|290480271|gb|EFD88912.1| hypothetical protein AWRIB429_0553 [Oenococcus oeni AWRIB429] Length = 267 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 7/213 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FR+GV W+++W+A EY L EDL+IR+YL+ +LK A V +I IERT Sbjct: 1 MGQKINPIGFRVGVIRDWDAKWYADKKEYVPALQEDLRIRKYLETNLKDAAVDRITIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM------TNSEIHLSVNEVPKPEINA 113 + +++A+PG++IG+ G D+E++R +LS + + +++++ E+ KP++NA Sbjct: 61 EPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDTYKGQHKRVNINIVEIRKPDLNA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 L+ Q IA LERRV FRRAM+ A+Q R GA GV+ + SGRLNGA+++R E Y EG V Sbjct: 121 HLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 PL TLRA IDY A T+YG+ GIK ++ D Sbjct: 181 PLHTLRADIDYSWDEAMTSYGNLGIKTWIYRGD 213 >gi|114107171|ref|YP_740156.1| ribosomal protein S3 [Daucus carota] gi|122239957|sp|Q0G9S3|RR3_DAUCA RecName: Full=30S ribosomal protein S3, chloroplastic gi|113200946|gb|ABI32462.1| ribosomal protein S3 [Daucus carota] Length = 218 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WF + Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFTQPKNYSEGLQEDQKIRDFIKNYVQKNLKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I + ++I+Y P L+I + IEK++ +K N N ++++++ + KP Sbjct: 61 ARIEIHKRIDLIQVIIYMGFPKLLIENRPGGIEKLQMNLQKEFNCVNRKLNITITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDGE 218 >gi|320526875|ref|ZP_08028065.1| ribosomal protein S3 [Solobacterium moorei F0204] gi|320132843|gb|EFW25383.1| ribosomal protein S3 [Solobacterium moorei F0204] Length = 269 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 143/227 (62%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+SRW+A +++G LL+ED+K+R +L+ LK A ++++ IERT Sbjct: 1 MGQKVSPIGMRVGVIRDWDSRWYANKADFGDLLNEDVKVRNFLEKELKDAYISRVEIERT 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTD--IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 K ++IV ARPG ++GK G +E ++KKLS +T I + V V P+++A L+ Sbjct: 61 SKKDVKVIVRCARPGAMLGKDGDKDKMEVLKKKLSKLTGGKNIKVDVIAVANPDLDARLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ I +QLE R FR A K+A+Q MR GA G+K +A GRL GAE++R E Y G VPL Sbjct: 121 ARRICEQLEARQSFRIAQKKAIQQTMRSGAKGIKTLAKGRLGGAEIARQEGYARGVVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 TLR+ IDY A T YG G+KV++ + + P A R Sbjct: 181 TLRSDIDYAAEEATTTYGKLGVKVWICRGEVLPGQMVKEPEAPSRPA 227 >gi|32965350|gb|AAP91833.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] gi|145982746|gb|ABQ01156.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 244 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|194335451|ref|YP_002017245.1| ribosomal protein S3 [Pelodictyon phaeoclathratiforme BU-1] gi|226697741|sp|B4SBV3|RS3_PELPB RecName: Full=30S ribosomal protein S3 gi|194307928|gb|ACF42628.1| ribosomal protein S3 [Pelodictyon phaeoclathratiforme BU-1] Length = 249 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 150/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I+IE Sbjct: 1 MGQKVNPTGFRLGIIRDWASRWYDDSPVISEKIKQDHVIRTYVLARLKKERAGIARIIIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVVKPEIEAQLIGD 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+GV++ GRL GAE++R+E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRSGAEGVRIRCGGRLGGAEIARSEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA++DY + A T G+ GIKV+V + + I E + +++ Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRIKE 227 >gi|282858368|ref|ZP_06267548.1| ribosomal protein S3 [Prevotella bivia JCVIHMP010] gi|282588816|gb|EFB93941.1| ribosomal protein S3 [Prevotella bivia JCVIHMP010] Length = 245 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A +++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGESLVEDRKIRAYLNKRLEKASISRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KP+++A ++ +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPDLDANIVGNNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E +V +RRA+K AV + MR GA+GVKV +GRLNGAE++R E + EGR PL TLRA Sbjct: 120 ARQVEGKVAYRRAIKMAVANVMRAGAEGVKVQITGRLNGAEMARKEMFKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A T G GIKV++ + + D T + + + Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQEKTNARS 225 >gi|78186075|ref|YP_374118.1| 30S ribosomal protein S3 [Chlorobium luteolum DSM 273] gi|91207826|sp|Q3B6F6|RS3_PELLD RecName: Full=30S ribosomal protein S3 gi|78165977|gb|ABB23075.1| SSU ribosomal protein S3P [Chlorobium luteolum DSM 273] Length = 252 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + ED IR Y+Q LK +AG+A+I+IE Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDSPVISGKIKEDHVIRNYVQTRLKREKAGIARIIIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++L +T E+ + V EV KPEI + LI + Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELGRITGKEVKIDVVEVVKPEIESQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 SIA QLE RV FRRAMK A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 SIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA++DY + A T G+ GIKV+V + ++ I E + +++ Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLNQRIDAIEEEEMKRIKE 227 >gi|290487112|gb|ADD29940.1| ribosomal protein S3 [Cornus florida] Length = 218 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 135/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQGHHSLWFAQPKNYSEGLQEDQKIRDCVKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQVNLQKEFNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQEDTKGIQVQIAGRIDGKEIARVEWVR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + A T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTARTIYGVLGIKIWIFIDEE 218 >gi|213962924|ref|ZP_03391184.1| ribosomal protein S3 [Capnocytophaga sputigena Capno] gi|213954581|gb|EEB65903.1| ribosomal protein S3 [Capnocytophaga sputigena Capno] Length = 246 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAALVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + E+ P Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214 >gi|256819988|ref|YP_003141267.1| 30S ribosomal protein S3 [Capnocytophaga ochracea DSM 7271] gi|256581571|gb|ACU92706.1| ribosomal protein S3 [Capnocytophaga ochracea DSM 7271] Length = 246 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAALVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + E+ P Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214 >gi|330850877|ref|YP_004376627.1| 30S ribosomal protein S3 [Fistulifera sp. JPCC DA0580] gi|328835697|dbj|BAK18993.1| 30S ribosomal protein S3 [Fistulifera sp. JPCC DA0580] Length = 214 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A ++Y +L ED IR Y+ K +A + I R Sbjct: 1 MGQKTHPLGFRLGITQEHRSTWYANLTQYAEILKEDDAIRTYIHKISKANSIANVNINRN 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 N +I +++ +PG+++G G +EK+ + N+ + ++ ++V EV K +++A+L+ Sbjct: 61 SLNDQIQLNIHTGKPGILVGDLGVGLEKLLSNIKNLLPFDRQLIINVLEVEKVDLSASLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A +A+QLE+RV FRRA++ A+Q A + A+G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVAEQLEKRVAFRRAIREALQRAQKQNANGIKIQVSGRLNGAEIARSEWTREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG GIKV++ + + Sbjct: 181 TLRADIDYATQEANTIYGVLGIKVWLFKSEIL 212 >gi|325299126|ref|YP_004259043.1| ribosomal protein S3 [Bacteroides salanitronis DSM 18170] gi|324318679|gb|ADY36570.1| ribosomal protein S3 [Bacteroides salanitronis DSM 18170] Length = 243 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 99/221 (44%), Positives = 149/221 (67%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGEALLEDSKIRKYLNARLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARQVEGKIAYRRAIKTAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY A T G GIKV++ + + + + Sbjct: 180 DIDYCHTEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220 >gi|290581283|ref|YP_003485675.1| 30S ribosomal protein S3 [Streptococcus mutans NN2025] gi|24378382|gb|AAN59624.1|AE015024_16 30S ribosomal protein S3 [Streptococcus mutans UA159] gi|254998182|dbj|BAH88783.1| 30S ribosomal protein S3 [Streptococcus mutans NN2025] Length = 208 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 87/206 (42%), Positives = 139/206 (67%), Gaps = 1/206 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER + ++ Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERAVNKVNVSLH 59 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++IA+QLE+RV Sbjct: 60 TAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIVEIKSPDLDAHLVGENIARQLEQRVA 119 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA IDY A Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRADIDYAWEEA 179 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215 +T YG G+KV++ + + +T Sbjct: 180 DTTYGKLGVKVWIYRGEILPARKNTK 205 >gi|189218701|ref|YP_001939342.1| Ribosomal protein S3 [Methylacidiphilum infernorum V4] gi|226697729|sp|B3E0J0|RS3_METI4 RecName: Full=30S ribosomal protein S3 gi|189185559|gb|ACD82744.1| Ribosomal protein S3 [Methylacidiphilum infernorum V4] Length = 215 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 147/210 (70%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPILFRL VN W S W+A + + ED +IR++++ L+ A VAKI+IER Sbjct: 1 MGQKVNPILFRLPVNRQWRSIWYADKKTFPRFIWEDYQIRKFIKKRLESAAVAKIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 RI +++ARPGL+IG++ +++KI++++ + E+ + V EV PE+ A L+A+ Sbjct: 61 GNRVRINIHTARPGLVIGRRAAELDKIKEEIMEIVEKGREVLVDVKEVKHPELEAQLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA Q+ERRV +RRA+KRA+Q M GA G+KV +GRL GAE++R E Y EG+VPL +L Sbjct: 121 NIALQIERRVAYRRAIKRAMQLTMDAGAVGIKVRCAGRLGGAEIARAERYHEGKVPLHSL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 RA +DYG A A+T G G+KV++ ++++ Sbjct: 181 RADVDYGFAEAKTVAGKIGVKVWICRKEDI 210 >gi|300728437|ref|ZP_07061799.1| ribosomal protein S3 [Prevotella bryantii B14] gi|299774356|gb|EFI70986.1| ribosomal protein S3 [Prevotella bryantii B14] Length = 241 Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGV W+S WF G +G L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKVNPISNRLGVIRGWDSNWF-GGKNFGDSLVEDQKIRKYLNERLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L N+ +I +++ EV KPE++AT++A +I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKDIQINIFEVKKPELDATIVATNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E +V +RRA+K A+ + MR GA+G+KV +GRLNGAE++R E EGR PL T RA Sbjct: 120 ARQVEGKVAYRRAIKMAIANTMRAGAEGIKVQITGRLNGAEMARKEMLKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 ID+ A A T G GIKV++ + D T + Sbjct: 180 DIDFCQAEALTKVGLLGIKVWICRGEVYGKRDLTPNFTQD 219 >gi|183221341|ref|YP_001839337.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911434|ref|YP_001962989.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226697724|sp|B0SA41|RS3_LEPBA RecName: Full=30S ribosomal protein S3 gi|226697725|sp|B0SSH1|RS3_LEPBP RecName: Full=30S ribosomal protein S3 gi|167776110|gb|ABZ94411.1| 30S Ribosomal protein S3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779763|gb|ABZ98061.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 225 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W+S WF+ +Y LHED+KIR +LQ K A V KI+IER Sbjct: 1 MGQKVNPIGLRIGITRNWDSVWFS-KQDYIKNLHEDIKIRRFLQKKFKNASVVKIIIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +++++PG++IG+KG +IE ++++L + I +++ EV KPEI A IA+++ Sbjct: 60 PEKINVNLHTSKPGMVIGQKGQNIEAVKQELKKFADKPIGMNIIEVKKPEIIAQAIAETV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ FRR MK ++ AMR G +GVK+ SGRLNGA+++RTE Y+EGRVPL TLRA Sbjct: 120 ALQIEQRMPFRRVMKAELRRAMRGGVEGVKIQISGRLNGADMARTEKYMEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 ID+G A T +G G+KV+ D + + Sbjct: 180 KIDFGFKEALTTFGQIGVKVWTYTGDYFPTKEES 213 >gi|32965358|gb|AAP91839.1| ribosomal protein S3 [Ipomoea obscura witches'-broom phytoplasma] Length = 244 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTTKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAFEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|300865408|ref|ZP_07110213.1| 30S ribosomal protein S3 [Oscillatoria sp. PCC 6506] gi|300336591|emb|CBN55363.1| 30S ribosomal protein S3 [Oscillatoria sp. PCC 6506] Length = 242 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG+ SRWFA Y LL ED KIR+Y+Q +L AG++ + I+R Sbjct: 1 MGQKIHPVGFRLGITQEHRSRWFADAKNYPELLQEDSKIRQYVQKNLSNAGISSVKIDRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + V +ARPG+++G+ GT IE++R L +N +I ++V EV + + +ATLIA+ Sbjct: 61 ADQIDLEVQTARPGVVVGRGGTGIEQLRVGLQQQLGSNRQIRINVVEVQRVDADATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQQLERRV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE EGRVPL TL Sbjct: 121 YIAQQLERRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD--STIPAAEHRVVEKD 226 RA IDY A+T YG G+KV+V + + + A R K Sbjct: 181 RADIDYSYCTAKTIYGILGVKVWVFKGEIIPGQEDIPAPNAGPPRTKNKG 230 >gi|194334855|ref|YP_002016715.1| 30S ribosomal protein S3 [Prosthecochloris aestuarii DSM 271] gi|226697745|sp|B4S5C2|RS3_PROA2 RecName: Full=30S ribosomal protein S3 gi|194312673|gb|ACF47068.1| ribosomal protein S3 [Prosthecochloris aestuarii DSM 271] Length = 251 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 151/226 (66%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ L +D IR Y+Q LK+ AG+AKI+IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVIAEKLKQDHVIRNYVQARLKRERAGIAKIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +++ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI + Sbjct: 61 RTTKHIKINIFAARPGAVVGRKGEEINNLSQELSRITGREVKIDVIEVIKPEIEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL TL Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA++DY + A T G+ GIKV+V + + I E + ++ Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVLVQRIDAIEEDELKKIK 226 >gi|730658|sp|P41119|RS3_ANAAB RecName: Full=30S ribosomal protein S3 gi|456692|gb|AAA22058.1| ribosomal protein S3 [Anaeroplasma abactoclasticum] Length = 251 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 142/213 (66%), Gaps = 5/213 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P+ R+G+N W++ W+A ++ LL EDLKIR+Y+ +A +++++IER Sbjct: 1 MGQKVSPMGLRVGINREWDAAWYAEKTQVANLLLEDLKIRKYINEVYAKAAISRVIIERV 60 Query: 60 ----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 +I +++A+PG++IG + K+ K+L +T I L+V EV +PE++ATL Sbjct: 61 KGPNNKDRVKITLHTAKPGVVIGHEAETKNKVVKELGFITKKNIILNVVEVRRPELDATL 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 +A+SIA+QLE R FRR K A+Q A++ GA G K + SGRL GAE++R+E Y EG+VPL Sbjct: 121 VAKSIAEQLEARASFRRVQKVAIQRALKAGAKGAKTLISGRLGGAEIARSEGYNEGQVPL 180 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 QTLRA +DY A A T YG GIKV++ + Sbjct: 181 QTLRADVDYAVAEAHTTYGKLGIKVWIYKGEVF 213 >gi|34501443|ref|NP_904230.1| ribosomal protein S3 [Physcomitrella patens subsp. patens] gi|68052968|sp|Q6YXK8|RR3_PHYPA RecName: Full=30S ribosomal protein S3, chloroplastic gi|34494813|dbj|BAC85080.1| ribosomal protein S3 [Physcomitrella patens subsp. patens] Length = 218 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52 MGQKINP+ FRLGV +S WFA+ Y LL ED K+R ++ ++ + G+ Sbjct: 1 MGQKINPLGFRLGVTQNHHSYWFAQPKNYSKLLQEDQKMRNCIENYVYKNIRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 A+I I+R ++ +++ P L++ + IE+++ + ++ + ++ +++ EV KP Sbjct: 61 ARIEIKRKTDLIQVEIHTGFPALLVENRKRGIEQLKTDVQSILTSGDRKLRMTLTEVTKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E Sbjct: 121 YGEPNILAEYIALQLESRVAFRRTMKKAIELAKKTNIKGIKIQIAGRLNGAEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA IDY A+T YG GIK+++ ++ Sbjct: 181 EGRVPLQTLRAKIDYCYYPAQTIYGVLGIKIWIFQDEK 218 >gi|12751545|ref|NP_043610.2| ribosomal protein S3 [Odontella sinensis] gi|1350891|sp|P49491|RR3_ODOSI RecName: Full=30S ribosomal protein S3, chloroplastic gi|13620209|emb|CAA91642.2| 30S ribosomal protein S3 [Odontella sinensis] Length = 214 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 134/212 (63%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A ++Y LL ED +IR YL K A ++ I I R Sbjct: 1 MGQKTHPLGFRLGITQEHRSAWYANFNQYANLLKEDNQIRTYLNKLAKTASISNIQINRN 60 Query: 61 --HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 ++ + + RPG+++G+ GT I+ + + + N ++ +++ EV K +NA+LI Sbjct: 61 GLSDQIQLNIETGRPGVLVGENGTGIKTLLSNIKKILPPNRQLTINIIEVEKVNLNASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + +QLE RV FR+A+++A+QSA+ +G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 GDLVVEQLEDRVAFRKAIRKAMQSALDENVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG G+KV++ + + Sbjct: 181 TLRADIDYATKEAHTIYGVLGVKVWLFKSEIL 212 >gi|189347697|ref|YP_001944226.1| 30S ribosomal protein S3 [Chlorobium limicola DSM 245] gi|226697678|sp|B3EGY4|RS3_CHLL2 RecName: Full=30S ribosomal protein S3 gi|189341844|gb|ACD91247.1| ribosomal protein S3 [Chlorobium limicola DSM 245] Length = 251 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK +AG+A+I+IE Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDSPVISEKIKQDHVIRNYVLARLKREKAGIARIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++L+ +T E+ + V EV KPEI A LI Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELTRITGKEVKIDVVEVIKPEIEAQLIGD 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA+IDY + A T G+ GIKV+V + + I E + ++ Sbjct: 181 RANIDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDEMKRMK 226 >gi|315225407|ref|ZP_07867221.1| 30S ribosomal protein S3 [Capnocytophaga ochracea F0287] gi|314944680|gb|EFS96715.1| 30S ribosomal protein S3 [Capnocytophaga ochracea F0287] Length = 246 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ +I +++ E+ +PE++A L+A SI Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITSKDIQINIFEIKRPELDAALVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + E+ P Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214 >gi|313158326|gb|EFR57728.1| ribosomal protein S3 [Alistipes sp. HGB5] Length = 263 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 96/205 (46%), Positives = 142/205 (69%), Gaps = 1/205 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSEKLVEDAKIRKYLNVRLAKASISKIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A ++ Q+I Sbjct: 60 LKLVTVTISTARPGIIIGKGGQEVDKLKEELKKLTGKEIQINIFEVKRPEVDAVIVGQNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE RV FRRA+K AV S MR GA+G+K+ SGR+ GAE++R+E EGR+PL T RA Sbjct: 120 ARQLEGRVSFRRAVKTAVASTMRMGAEGIKIQVSGRVGGAEMARSETIKEGRIPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +D+ A T G G+KV++ Sbjct: 180 DVDFCLTEALTKVGILGVKVWICQG 204 >gi|4927746|gb|AAD33262.1|AF126059_3 RpS3 [Streptococcus pneumoniae] gi|4927755|gb|AAD33271.1| RpS3 [Streptococcus pneumoniae] gi|4927764|gb|AAD33280.1| RpS3 [Streptococcus pneumoniae] Length = 208 Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 139/206 (67%), Gaps = 1/206 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER + ++ Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERAVNKVNVSLH 59 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + IA+QLE+RV Sbjct: 60 TAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVA 119 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA IDY A Sbjct: 120 FRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRADIDYAWEEA 179 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215 +T YG G+KV++ + + +T Sbjct: 180 DTTYGKLGVKVWIYRGEVLPARKNTK 205 >gi|110598093|ref|ZP_01386371.1| ribosomal protein S3 [Chlorobium ferrooxidans DSM 13031] gi|110340225|gb|EAT58722.1| ribosomal protein S3 [Chlorobium ferrooxidans DSM 13031] Length = 251 Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 150/227 (66%), Gaps = 2/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I+IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHVIRNYVIARLKRERAGIARIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVVKPEIEAQLIGD 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRSGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 RA++DY + A T G+ GIKV+V + + I E + +++ Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRIKE 227 >gi|38426832|gb|AAR20458.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 239 Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|78189801|ref|YP_380139.1| 30S ribosomal protein S3 [Chlorobium chlorochromatii CaD3] gi|91207646|sp|Q3APH9|RS3_CHLCH RecName: Full=30S ribosomal protein S3 gi|78172000|gb|ABB29096.1| SSU ribosomal protein S3P [Chlorobium chlorochromatii CaD3] Length = 253 Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 102/226 (45%), Positives = 148/226 (65%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I IE Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHIIRNYVLARLKKERAGIARINIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++LS + E+ + V EV KPEI A LI + Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRIIGKEVKIDVVEVIKPEIEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA++DY + A T G+ GIKV+V + + I E + ++ Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDEMKKMK 226 >gi|307297388|ref|ZP_07577194.1| ribosomal protein S3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916648|gb|EFN47030.1| ribosomal protein S3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 209 Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 99/208 (47%), Positives = 142/208 (68%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLGV+ W +RW Y L EDLKIR++L+ + AGV+ I IER Sbjct: 1 MGQKVHPYGFRLGVSKDWKARWI-NEKNYKEYLLEDLKIRDFLKKNYMAAGVSDIYIERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I V ARPG++IGKKG++++ +R++L + + L++ EV PE +A L+A+ Sbjct: 60 EPGKVVITVKCARPGVMIGKKGSEVKLLRQRLEKLITRQFQLNIEEVKTPETDAILVAED 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++RAMKRA+ +AMR GA G+K++ SGRLNGA+++RTE YLEGR+PLQTLR Sbjct: 120 IASRIEKRASYKRAMKRAIFTAMRKGARGIKIMVSGRLNGADIARTEWYLEGRLPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 A +DYG A T G G+KV++ D Sbjct: 180 ADLDYGYTTAFTKMGIIGVKVWIYKGDV 207 >gi|58379061|gb|AAW72452.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 252 Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|48374164|gb|AAT41877.1| 30S ribosomal subunit S3 [Fremyella diplosiphon Fd33] Length = 253 Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 104/225 (46%), Positives = 144/225 (64%), Gaps = 7/225 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA +Y LL ED K+R+Y++ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAVPDKYPELLQEDYKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQELLGSNRQIRINVVEVQRVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 PL TLRA IDY A+T YG GIKV+V + + + PA Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEEAAPAP 225 >gi|27734511|sp|Q8VQR8|RS3_PHYPY RecName: Full=30S ribosomal protein S3 gi|18042127|gb|AAL57843.1|AF453327_3 ribosomal protein S3 [Phytoplasma sp. PY1] gi|50345841|gb|AAT74863.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 252 Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|306486205|gb|ADM92744.1| ribosomal protein S3 [Franklinia alatamaha] Length = 218 Score = 231 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+++Q ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFAQPKNYSEGLEEDQKIRDFIQNYVQKNMRISSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + I++++ +K N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIDELQMNLQKEFNCLKRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCFYTVRTIYGVLGIKIWIFIDEE 218 >gi|269124032|ref|YP_003306609.1| 30S ribosomal protein S3 [Streptobacillus moniliformis DSM 12112] gi|268315358|gb|ACZ01732.1| ribosomal protein S3 [Streptobacillus moniliformis DSM 12112] Length = 219 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 145/215 (67%), Gaps = 2/215 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK++P R+G+ TW+S+WFA +G EY HEDLKIREY++ + QAG++ I IER Sbjct: 1 MGQKVDPRGMRIGIVKTWDSKWFARKGKEYLNNFHEDLKIREYIKKNYYQAGISSIAIER 60 Query: 60 -THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 + IIV + + ++IG+KG +I +R KL NMT ++ + E+ P +A L+A+ Sbjct: 61 VSENEITIIVSTGKAAVLIGRKGAEITALRAKLENMTGKKVFVKALEIKNPNRDAQLVAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 SIA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TL Sbjct: 121 SIATAIEKRVAYKRAVQQAIQRAEKAGVLGIKVMTSGRLNGAEIARSEWTLSGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 RA +DY TA A T YG+ GIKV++ + + Sbjct: 181 RADVDYATATAHTTYGALGIKVWIFNGEVLPTKKE 215 >gi|161897993|gb|ABX80107.1| ribosomal protein S3 [Lilium sp. phytoplasma NECu2] Length = 232 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|308191282|gb|ADO16223.1| ribosomal protein S3 [Cherry bunchy leaf phytoplasma] Length = 237 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|159135078|gb|ABW88127.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/9] Length = 236 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|51209937|ref|YP_063601.1| ribosomal protein S3 [Gracilaria tenuistipitata var. liui] gi|68052935|sp|Q6B8V9|RR3_GRATL RecName: Full=30S ribosomal protein S3, chloroplastic gi|50657691|gb|AAT79676.1| 30S ribosomal protein S3 [Gracilaria tenuistipitata var. liui] Length = 217 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 89/214 (41%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FR+G+ S WF+ Y L ED KIR ++ L A ++ I I+R Sbjct: 1 MGQKTHPLGFRIGITRDHKSSWFSNMKSYPKLAQEDYKIRSCIEKQLHNASISLIYIDRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 ++ +++ARPG+I+GK G +E +RKKL + +I +++ E+ P+ ATLIA+ Sbjct: 61 VDQVQVHIHTARPGIILGKMGRGLEDLRKKLETTLKNDTQIRINLIEITDPDKEATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLE+R+ FRR +++A+Q + + G+K+ SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FIVQQLEKRIAFRRVIRQAMQRSQKAKNQGIKIQVSGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 RAHIDY A T YG G+KV++ +++ Sbjct: 181 RAHIDYSYKTAHTIYGILGVKVWLFKGEKIITDK 214 >gi|56751880|ref|YP_172581.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301] gi|81301035|ref|YP_401243.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 7942] gi|3122820|sp|O24695|RS3_SYNP6 RecName: Full=30S ribosomal protein S3 gi|123755336|sp|Q31L13|RS3_SYNE7 RecName: Full=30S ribosomal protein S3 gi|2446896|dbj|BAA22455.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301] gi|56686839|dbj|BAD80061.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301] gi|81169916|gb|ABB58256.1| SSU ribosomal protein S3P [Synechococcus elongatus PCC 7942] Length = 244 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 3/220 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ FRLGV SRWFA + Y LL ED KIR+Y++ +L AG+A I +ER Sbjct: 1 MGQKINPVGFRLGVTQEHRSRWFADPNRYPQLLQEDKKIRDYVRKNLSNAGIADIRVERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + + +ARPG+++G+ G I+ +R + L ++ +I ++V EV + + +A L+ Sbjct: 61 ADQVELEIRTARPGVVVGRGGAGIDTLREGLQALLKDSSRQIRINVIEVERVDADAALLG 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IAQQLERRV FRR +++A+Q A R G G+K+ +GRLNGAE++RTE EGRVPL T Sbjct: 121 EYIAQQLERRVAFRRCVRQAIQRAQRAGVQGIKIQVAGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 LRA IDY A T YG GIKV+V + + + P+ Sbjct: 181 LRADIDYAYTTATTTYGILGIKVWVFRGEIIPGQEDAAPS 220 >gi|118411065|ref|YP_874460.1| 30S ribosomal protein S3 [Phaeodactylum tricornutum] gi|125987747|sp|A0T0I5|RR3_PHATC RecName: Full=30S ribosomal protein S3, chloroplastic gi|116739812|gb|ABK20683.1| 30S ribosomal protein S3 [Phaeodactylum tricornutum] Length = 214 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A ++Y +L ED KIR Y+ K +A + I R Sbjct: 1 MGQKTHPLGFRLGITQEHKSTWYANFNQYANILKEDDKIRTYIHTISKANSIANVRINRN 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 N +I + + +PG+++G G +E + + N ++ ++V EV K +++A+L+ Sbjct: 61 GLNDQIQLNIETGKPGILVGDLGAGLETLLNNVKKFLPANRQLTINVLEVEKVDLDASLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG GIKV++ + + Sbjct: 181 TLRADIDYATQEANTIYGVLGIKVWLFKSEIL 212 >gi|254425252|ref|ZP_05038970.1| ribosomal protein S3 [Synechococcus sp. PCC 7335] gi|196192741|gb|EDX87705.1| ribosomal protein S3 [Synechococcus sp. PCC 7335] Length = 243 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 98/222 (44%), Positives = 139/222 (62%), Gaps = 3/222 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI RLG+ SRW+A + Y LL ED IREY+ +L AG++ + IER Sbjct: 1 MGQKIHPIGLRLGITQEHRSRWYADKNRYPELLEEDHNIREYVIKNLANAGISDVHIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + V +ARPG+++G+ G IE +R +K + +I ++V EV K + +A LI Sbjct: 61 ADQIDLEVRTARPGVVVGRGGAGIESLRSGLQKQIKDDSRQIRINVVEVSKVDADAGLIC 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I QQLERRV FRR +++A+Q A R G +G+K+ SGRLNGAE++RTE EGRVPL T Sbjct: 121 EYITQQLERRVSFRRVVRQAIQRAQRAGVEGIKIQVSGRLNGAEIARTEWTREGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 LRA+IDY A+T YG G+K +V + + +S + Sbjct: 181 LRANIDYAYRTAQTTYGILGVKTWVFKGEVIPGQESQPEESR 222 >gi|38426840|gb|AAR20464.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 242 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|76798223|ref|ZP_00780473.1| ribosomal protein S3 [Streptococcus agalactiae 18RS21] gi|77406119|ref|ZP_00783193.1| ribosomal protein S3 [Streptococcus agalactiae H36B] gi|77409628|ref|ZP_00786301.1| ribosomal protein S3 [Streptococcus agalactiae COH1] gi|77412288|ref|ZP_00788604.1| ribosomal protein S3 [Streptococcus agalactiae CJB111] gi|77414567|ref|ZP_00790710.1| ribosomal protein S3 [Streptococcus agalactiae 515] gi|209558633|ref|YP_002285105.1| 30S ribosomal protein S3 [Streptococcus pyogenes NZ131] gi|21903763|gb|AAM78653.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS315] gi|28810205|dbj|BAC63143.1| 30S ribosomal protein S3 [Streptococcus pyogenes SSI-1] gi|76586432|gb|EAO62940.1| ribosomal protein S3 [Streptococcus agalactiae 18RS21] gi|77159365|gb|EAO70533.1| ribosomal protein S3 [Streptococcus agalactiae 515] gi|77161678|gb|EAO72673.1| ribosomal protein S3 [Streptococcus agalactiae CJB111] gi|77171751|gb|EAO74947.1| ribosomal protein S3 [Streptococcus agalactiae COH1] gi|77175300|gb|EAO78095.1| ribosomal protein S3 [Streptococcus agalactiae H36B] gi|209539834|gb|ACI60410.1| SSU ribosomal protein S3p (S3e) [Streptococcus pyogenes NZ131] Length = 208 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 138/206 (66%), Gaps = 1/206 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER + ++ Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERAVNKVIVSLH 59 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++IA+QLE+RV Sbjct: 60 TAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENIARQLEQRVA 119 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA IDY A Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRADIDYAWEEA 179 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215 +T YG G+KV++ + + +T Sbjct: 180 DTTYGKLGVKVWIYRGEVLPARKNTK 205 >gi|197294625|ref|YP_001799166.1| 30S ribosomal protein S3 [Candidatus Phytoplasma australiense] gi|226697743|sp|B1VAE2|RS3_PHYAS RecName: Full=30S ribosomal protein S3 gi|171853952|emb|CAM11915.1| 30S ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 250 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|11465995|ref|NP_054537.1| ribosomal protein S3 [Nicotiana tabacum] gi|78102577|ref|YP_358717.1| ribosomal protein S3 [Nicotiana sylvestris] gi|133939|sp|P06357|RR3_TOBAC RecName: Full=30S ribosomal protein S3, chloroplastic gi|91207771|sp|Q3C1L6|RR3_NICSY RecName: Full=30S ribosomal protein S3, chloroplastic gi|11865|emb|CAA77381.1| ribosomal protein S3 [Nicotiana tabacum] gi|77799604|dbj|BAE46693.1| ribosomal protein S3 [Nicotiana sylvestris] gi|225235|prf||1211235BT ribosomal protein S3 Length = 218 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K + N +++++V + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQTTLQKEFHCVNRKLNIAVTRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218 >gi|159135081|gb|ABW88129.1| ribosomal protein S3 [Broccoli phytoplasma sp. br273] Length = 237 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|328949271|ref|YP_004366608.1| ribosomal protein S3 [Treponema succinifaciens DSM 2489] gi|328449595|gb|AEB15311.1| ribosomal protein S3 [Treponema succinifaciens DSM 2489] Length = 250 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 101/207 (48%), Positives = 138/207 (66%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL--QCHLKQAGVAKILIE 58 MGQK+NPI RLGVN TW SRW+A EY L ED+KIR+ + K A +A+I I Sbjct: 1 MGQKVNPIGLRLGVNKTWQSRWYADSREYADLFLEDMKIRKLVGSLPECKNADIAEIEIV 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I++++ARPG+IIG KG IEKI + ++ + + E+ +PEINA+LIAQ Sbjct: 61 RHPQRVTIVIHTARPGVIIGVKGATIEKISADIQKQLTKKVQIKIKEIKRPEINASLIAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++ +QL R FR+A+K++ +AM+ GA G+K+ SGRL GA+++R+E EGRVPL TL Sbjct: 121 NVGRQLAGRGSFRKALKQSASNAMKGGAQGIKIRISGRLGGADMTRSEELKEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205 RA IDYGT A T YG GIKV+V Sbjct: 181 RADIDYGTYEALTTYGKIGIKVWVYNG 207 >gi|118411197|ref|YP_874591.1| 30S ribosomal protein S3 [Thalassiosira pseudonana] gi|125987749|sp|A0T0X9|RR3_THAPS RecName: Full=30S ribosomal protein S3, chloroplastic gi|116739944|gb|ABK20814.1| 30S ribosomal protein S3 [Thalassiosira pseudonana] Length = 214 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A Y LL ED KIR YL K A ++ I I R Sbjct: 1 MGQKTHPLGFRLGITQEHRSAWYADFKHYSTLLEEDDKIRTYLNKLAKLASISDIHINRN 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 +I + + RPG+++G G+ I+ + + N +I ++V EV NA+LI Sbjct: 61 GLGDQIELNIETGRPGILVGDNGSGIKTLATNIKKFIPNNRQITINVVEVENVNANASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A + QQLE RV FRRA++ A+Q +G+KV SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVVQQLEDRVAFRRAIREALQCLQDNQVNGIKVEVSGRLNGAEMARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG G+KV++ + + Sbjct: 181 TLRADIDYATKEANTIYGVLGVKVWLFKNEIL 212 >gi|223931038|ref|YP_002586898.1| ribosomal protein S3 [Syntrichia ruralis] gi|219562252|gb|ACL27583.1| ribosomal protein S3 [Syntrichia ruralis] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 132/214 (61%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52 MGQKINP+ FRLGV + NS WFA+ Y LL ED KIR ++ ++ + G+ Sbjct: 1 MGQKINPLGFRLGVIQSHNSYWFAQPKNYSKLLQEDQKIRHCIENYVYKNIRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 A++ I+R ++ +++ P L++ +G IE+++ + + + ++ +++ E+ KP Sbjct: 61 ARVEIKRKTDLIQVEIHTGFPALLVENRGRGIEQLKTDVQTILTPGDRKLRMTLTEITKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E Sbjct: 121 YGEPNILAEYIALQLESRVAFRRTMKKAIELAKKTNIKGIKIQIAGRLNGAEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+RA IDY A+T YG GIK+++ Sbjct: 181 EGRVPLQTIRAKIDYCYYPAQTIYGVLGIKIWIF 214 >gi|196018443|ref|XP_002118805.1| hypothetical protein TRIADDRAFT_34776 [Trichoplax adhaerens] gi|190578158|gb|EDV18710.1| hypothetical protein TRIADDRAFT_34776 [Trichoplax adhaerens] Length = 202 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 100/203 (49%), Positives = 144/203 (70%), Gaps = 1/203 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FRLG+ TW+S W+ Y LHED+KIR+ + L AGV+++ +ER Sbjct: 1 MGQKVNPNSFRLGIVSTWDSSWYC-TKNYAKKLHEDIKIRKLIFDKLNYAGVSRVCVERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +YS+RPG++IGKKG DI KI++ +S +T +E+ +++ EV K E + L+A+++ Sbjct: 60 ANKIIINIYSSRPGVVIGKKGADIAKIKEFISKITLNEVVINITEVRKAETDPLLVAKAV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE++V FR+A+KRA+ +AM+ GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA Sbjct: 120 AEQLEKKVSFRKAVKRAISNAMKMGAKGIKISVSGRLGGAEIARTEWYKEGRVPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203 + Y A A T YG G+KV+V Sbjct: 180 IVKYDMAEAHTIYGLIGVKVWVY 202 >gi|32965338|gb|AAP91824.1| ribosomal protein S3 [Primrose virescence phytoplasma] gi|52547302|gb|AAU81714.1| ribosomal protein S3 [Candidatus Barley phytoplasma] Length = 244 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|11465428|ref|NP_045181.1| ribosomal protein S3 [Cyanidium caldarium] gi|27734488|sp|Q9TLT8|RR3_CYACA RecName: Full=30S ribosomal protein S3, chloroplastic gi|6466331|gb|AAF12913.1|AF022186_35 unknown [Cyanidium caldarium] Length = 207 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 91/207 (43%), Positives = 144/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP+ FRLG+N +S WFAR Y A+L ED KIR+Y+ +L +A +++I I R Sbjct: 1 MGQKINPLSFRLGINKLHHSSWFARPQSYTAILQEDKKIRDYIFTNLLRASISRIQINRQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIAQ 118 + ++++RPG+IIG+ GT I+ +++ + N+ + + + +++ +V P+I+A L+A Sbjct: 61 FNQVELQLHTSRPGVIIGRSGTGIDSLKRNVKNLLSKQSQLKINIIDVTNPDIDAVLLAC 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I+QQLE R F+RA+++A+Q A + G+K+ SGRLNGAE++RTE EGRVPLQTL Sbjct: 121 FISQQLESRTTFKRAVRQAIQRAQKSDIPGIKIQVSGRLNGAEIARTEWIREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205 +A +DY T+ A T++G G+KV++ Sbjct: 181 KADLDYATSSAYTSFGVVGVKVWIFKG 207 >gi|28261755|ref|NP_783269.1| ribosomal protein S3 [Atropa belladonna] gi|27734482|sp|Q8S8V5|RR3_ATRBE RecName: Full=30S ribosomal protein S3, chloroplastic gi|20068369|emb|CAC88082.1| ribosomal protein S3 [Atropa belladonna] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKELNCVNRKLNIAVTRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFLDEE 218 >gi|126680553|gb|ABO26494.1| ribosomal protein S3 [Mexican periwinkle virescence phytoplasma] Length = 251 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 138/215 (64%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKINP RLG+ TW+S+WF + E AL+ ED IRE ++ K++ +++I I+R Sbjct: 1 MGQKINPNGLRLGIIRTWDSQWFVQDKEIPALIKEDYLIRELIKNFSKKSAISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T +I +++A+PG+IIG+ G K+ KL +T ++ L++ EV E A LI Sbjct: 61 KEKTKNRIKIHIHTAKPGVIIGRDGETRNKMVAKLKELTQKDVDLNILEVKNFEKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA+QLE R+ FRR K A+Q A++ G G+K + SGRLNGAE++R+E EGRVPL Sbjct: 121 AQNIAEQLENRMNFRRVQKMAIQKALKAGVKGIKTLVSGRLNGAEIARSEGNAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY + A T YG G+KV++ + + Sbjct: 181 TLRADIDYASLQAHTTYGVLGVKVWIFHGEVLPGQ 215 >gi|37039552|gb|AAQ88141.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 239 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNYSKRNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+I GK G KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTAKPGIISGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|75906920|ref|YP_321216.1| 30S ribosomal protein S3 [Anabaena variabilis ATCC 29413] gi|91207639|sp|Q3MFB5|RS3_ANAVT RecName: Full=30S ribosomal protein S3 gi|75700645|gb|ABA20321.1| SSU ribosomal protein S3P [Anabaena variabilis ATCC 29413] Length = 260 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 7/225 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA S Y LL ED K+R+Y++ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + N +I ++V EV + + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A + G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 PL TLRA IDY A+T YG GIKV+V + + + P Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEVAAPPP 225 >gi|239618259|ref|YP_002941581.1| ribosomal protein S3 [Kosmotoga olearia TBF 19.5.1] gi|259495252|sp|C5CGQ8|RS3_KOSOT RecName: Full=30S ribosomal protein S3 gi|239507090|gb|ACR80577.1| ribosomal protein S3 [Kosmotoga olearia TBF 19.5.1] Length = 215 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 98/208 (47%), Positives = 141/208 (67%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W +RW Y L EDLKIR+Y++ AGV+ I IER Sbjct: 1 MGQKVHPYGFRLGISKDWKARWI-NEKNYKEYLLEDLKIRDYIKKTYHSAGVSDIFIERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I + ARPG+IIG+KG++++K+R L + N + L++ EV PE +A L+A+ Sbjct: 60 EPGKVSITIKCARPGVIIGRKGSEVKKLRAGLERLINRKFQLNIEEVKTPETDALLVAED 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++RAMKRA+ +AMR GA G+K++ SGRLNGAE++RTE YLEGR+PLQTL+ Sbjct: 120 IASRIEKRASYKRAMKRAIFTAMRKGAKGIKIMVSGRLNGAEIARTEWYLEGRLPLQTLK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 + IDYG A T G G++V++ D Sbjct: 180 SDIDYGYTTALTKMGIIGVRVWIYKGDV 207 >gi|95116727|gb|ABF56574.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 237 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLL 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|159135075|gb|ABW88125.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/5] Length = 237 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|27734479|sp|O98455|RR3_SPIMX RecName: Full=30S ribosomal protein S3, chloroplastic gi|4007871|gb|AAC95311.1| ribosomal protein S3 [Spirogyra maxima] Length = 218 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 88/218 (40%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 MGQKI+P+ FRLGV S WFAR S Y LL ED KIR ++ ++ G+ Sbjct: 1 MGQKIHPLGFRLGVTQEHLSNWFARPSRYSDLLEEDEKIRNCIKEYVRTHIRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPE 110 +++ I+R ++ +++ P L+I +G + +++ + N + ++ ++++E+ K Sbjct: 61 SRVKIQRKTDLVQVDIHTGFPALLIEGRGKGLLVLKQSVLNSISTERKLKITLSEIDKYY 120 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYL 169 A ++A+ IA QLE RV FRR MK+A+Q AM G G+K+ +GRLNGAE++R E Sbjct: 121 AEANILAEYIALQLESRVAFRRTMKKAIQLAMEQGKVKGIKIQIAGRLNGAEIARIEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA IDY A+T YG GIKV++ +E Sbjct: 181 EGRVPLQTLRACIDYCHYPAQTTYGVLGIKVWIFKGEE 218 >gi|32965342|gb|AAP91827.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|32965346|gb|AAP91830.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 244 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERX 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|32965354|gb|AAP91836.1| ribosomal protein S3 [Maize bushy stunt phytoplasma] Length = 244 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|28202211|ref|NP_777452.1| ribosomal protein S3 [Anthoceros formosae] gi|34924918|sp|Q85CS9|RR3_ANTFO RecName: Full=30S ribosomal protein S3, chloroplastic gi|27807913|dbj|BAC55388.1| ribosomal protein S3 [Anthoceros formosae] gi|27808066|dbj|BAC55485.1| ribosomal protein S3 [Anthoceros formosae] Length = 218 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 87/218 (39%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLK--------IREYLQCHLKQAGV 52 MGQKINP+ FRLGV S WFA+ + Y LL ED K +R++++ G+ Sbjct: 1 MGQKINPLGFRLGVTQNHCSHWFAKPNNYYKLLEEDEKMRNCIYNYVRKHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKP 109 A+I IER +I +Y+ P L++ +G IE+++ + N+ N ++ +++ EV +P Sbjct: 61 ARIEIERKTDLIQIEIYTGFPALLVESRGRGIEELKADVQTVLNLGNRKLRMALTEVEEP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR MK+A++ + G+K+ +GRLNGAE++R E Sbjct: 121 YTEPNILAEYIALQLENRVAFRRTMKKAIELTRKTSVKGIKIQIAGRLNGAEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA I+Y A+T YG GIKV++ +E Sbjct: 181 EGRVPLQTIRAQINYCYYPAQTIYGVLGIKVWIFQTEE 218 >gi|225712488|gb|ACO12090.1| 30S ribosomal protein S3 [Lepeophtheirus salmonis] Length = 238 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 108/226 (47%), Positives = 157/226 (69%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G++YG L ED KIR+Y+ L +A V+K++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSAWY-GGNDYGDRLAEDNKIRKYISARLARASVSKVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + SARPG+IIGK+G++++K++++L +T+ E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTITICSARPGIIIGKQGSEVDKLKEELKKLTSKEVQVNIYEIRRPEMDAKLVANSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E RV FRRA+K A+ +AMR GA+G+K+ A+GRLNGAE++RTE Y EGR PL T RA Sbjct: 120 ARQIEGRVSFRRAIKMAIAAAMRMGAEGIKIQAAGRLNGAEMARTEMYSEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY + A T YG GIKV++ + EV P +K Sbjct: 180 DIDYALSEALTTYGLIGIKVWIC-KGEVYGKRDLTPMETTAKQKKG 224 >gi|32965386|gb|AAP91860.1| ribosomal protein S3 [Apricot aster yellows phytoplasma] Length = 244 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEALPGQ 215 >gi|298373704|ref|ZP_06983693.1| ribosomal protein S3 [Bacteroidetes oral taxon 274 str. F0058] gi|298274756|gb|EFI16308.1| ribosomal protein S3 [Bacteroidetes oral taxon 274 str. F0058] Length = 255 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 95/225 (42%), Positives = 147/225 (65%), Gaps = 2/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G +G L ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKTNPISNRLGIIRGWDSNWYGGG-NFGDTLVEDSKIRKYLNIRLAKAMVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I V +ARPG I+G+ G D+EK+++++ +T+ +I +++ EV P+++A ++A + Sbjct: 60 LKLVTITVCAARPGFIVGRGGEDVEKLKEEIKKITDKDIEINIFEVKNPDLDAQIVANDV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+++E ++ +R+A++ A+ + M+ GA+G+KV SGRLNGAE++R+E Y EGR PL T RA Sbjct: 120 ARKIEGKIAYRKAVRSAIFNTMKNGAEGIKVQVSGRLNGAEIARSEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 IDY A A T G G+KV++ EV P E ++ Sbjct: 180 DIDYCHAEALTKVGLIGVKVWICRG-EVYGKKDLEPKFESERDKR 223 >gi|89280673|ref|YP_514890.1| ribosomal protein S3 [Solanum lycopersicum] gi|91207770|sp|Q2MI62|RR3_SOLLC RecName: Full=30S ribosomal protein S3, chloroplastic gi|84372021|gb|ABC56338.1| ribosomal protein S3 [Solanum lycopersicum] gi|89241709|emb|CAJ32432.1| ribosomal protein S3 [Solanum lycopersicum] Length = 218 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQKNMRTSSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKEFNCVNRKLNIAVTRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218 >gi|126680548|gb|ABO26491.1| ribosomal protein S3 [American potato purple top wilt phytoplasma] Length = 251 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+WFA E L+ ED IR+ + K++ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWFANDKEIPVLIKEDFLIRQLINNFSKKSSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG IIGK G + KI ++L +T I+L++ EV E + L+ Sbjct: 61 KEKTKNCITISIHTAKPGFIIGKDGENRNKIVEQLKKLTKKNINLNILEVKNSEKTSLLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQSMAEQLENRMKFRRVQKLAIQKALKSGAKGIKVLISGRLNGDEIARSEGHSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|229496214|ref|ZP_04389934.1| ribosomal protein S3 [Porphyromonas endodontalis ATCC 35406] gi|229316792|gb|EEN82705.1| ribosomal protein S3 [Porphyromonas endodontalis ATCC 35406] Length = 245 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 101/226 (44%), Positives = 147/226 (65%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG W+S W+ G YG L ED +IR+YL +AG+++I+IER Sbjct: 1 MGQKINPISNRLGYIRGWDSNWY-GGKNYGPTLLEDSRIRKYLNARHAKAGISRIVIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +ARPGLIIGK G +++K++++L +T E+ + + E+ +PE++++L+A SI Sbjct: 60 LHLVTVTICTARPGLIIGKGGQEVDKLKEELKKLTKKEVQIYIYEIRRPELDSSLVASSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE V +RRA+K A+ SAMR GA+G+KV SGRLNGAE++R+E + EGR PL TLRA Sbjct: 120 ARQLEGNVAYRRAVKMAIASAMRSGAEGIKVHLSGRLNGAEMARSEMFKEGRTPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 IDY A T G G+KV++ + EV + P + Sbjct: 180 DIDYAHEEALTKVGMIGVKVWIM-KGEVYEKRDLAPNFQQASQNNQ 224 >gi|218282165|ref|ZP_03488464.1| hypothetical protein EUBIFOR_01046 [Eubacterium biforme DSM 3989] gi|218216844|gb|EEC90382.1| hypothetical protein EUBIFOR_01046 [Eubacterium biforme DSM 3989] Length = 270 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 14/240 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK++PI R+GV W SRW+A E+G LL ED+KIRE ++ + + Sbjct: 1 MGQKVSPIGMRVGVIRDWQSRWYADDKEFGTLLMEDVKIRELVEAYYAKLSNEAVDKRKA 60 Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVP 107 +++I IERT +I+ +A PG++IG+ G IE ++KK++ + + + ++V EV Sbjct: 61 DPQISRIEIERTKGRMTVIIRTAHPGVVIGQDGKSIEGLKKKVAKIASAKNVQINVVEVA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P ++A L+A+ IA +LE R FR K+A+Q+ MR GA G+K SGRL GA+++RTE Sbjct: 121 NPNLDARLVARWIANELEGRKSFRATQKKAIQNTMRAGAKGIKTAVSGRLGGADMARTEG 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH-RVVEKD 226 Y EG VPL TLR+ IDY A T YG G+KV++ + + P A R + K Sbjct: 181 YSEGVVPLHTLRSDIDYAWEEAATQYGRLGVKVWICRGEVLPGEMVKEPEAPKQRPMRKG 240 >gi|32965378|gb|AAP91854.1| ribosomal protein S3 [Grey dogwood witches'-broom phytoplasma] Length = 244 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290574709|gb|ADD46948.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 252 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA VK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKEVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|91209026|ref|YP_538888.1| ribosomal protein S3 [Solanum bulbocastanum] gi|108773167|ref|YP_635677.1| ribosomal protein S3 [Solanum tuberosum] gi|91207775|sp|Q2MIE9|RR3_SOLBU RecName: Full=30S ribosomal protein S3, chloroplastic gi|91207776|sp|Q2VEE2|RR3_SOLTU RecName: Full=30S ribosomal protein S3, chloroplastic gi|82754662|gb|ABB90076.1| ribosomal protein S3 [Solanum tuberosum] gi|84371933|gb|ABC56251.1| ribosomal protein S3 [Solanum bulbocastanum] gi|88656841|gb|ABD47094.1| ribosomal protein S3 [Solanum tuberosum] Length = 218 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQKNMRTSSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKEFNCVNRKLNIAVTRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218 >gi|331271809|gb|AED02510.1| ribosomal protein S3 [Azalea little leaf phytoplasma] Length = 252 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ EDL IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDLLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|147669102|ref|YP_001213920.1| 30S ribosomal protein S3 [Dehalococcoides sp. BAV1] gi|189044974|sp|A5FRY1|RS3_DEHSB RecName: Full=30S ribosomal protein S3 gi|146270050|gb|ABQ17042.1| SSU ribosomal protein S3P [Dehalococcoides sp. BAV1] Length = 278 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 90/218 (41%), Positives = 143/218 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V +ARPG++IG+ G ++++R L ++ ++ L++ E+ + E++A L+A+S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV +RRAMK+A+ +M+ GA G+K+ ASGRL G E++R E EGRVPL TLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A TA G GIKV+V D + ++ +A Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESA 218 >gi|300088191|ref|YP_003758713.1| 30S ribosomal protein S3 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527924|gb|ADJ26392.1| ribosomal protein S3 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 283 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 141/217 (64%), Gaps = 1/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++P FR+G WNS+WFA ++ L EDLKIR+ ++ AG++ I IER Sbjct: 1 MGRKVHPYAFRIGAIKGWNSKWFAE-KDFSTNLLEDLKIRKAIKKKYADAGISNIEIERQ 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V ++RPG++IG+ G ++++R+ L ++ +I L+++E+ + E++A L+A+S+ Sbjct: 60 AAKITVTVSTSRPGIVIGRGGQRVDEMRRYLEEVSGKKIQLNIHEIGQAELDAYLVARSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+ERR+ +RRAMK+A+ + GA G+K+ +GRL G E++R E GRVPL T+RA Sbjct: 120 ADQMERRIAYRRAMKQAMFRTRQAGAQGIKIKCAGRLGGVEIARQEEMHNGRVPLHTIRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 IDYG A A T G G+KV+V D + ++ + + Sbjct: 180 DIDYGFAEAHTPLGRIGVKVWVYRGDILPEAKAVVEQ 216 >gi|220906725|ref|YP_002482036.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7425] gi|219863336|gb|ACL43675.1| ribosomal protein S3 [Cyanothece sp. PCC 7425] Length = 252 Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 101/232 (43%), Positives = 137/232 (59%), Gaps = 10/232 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL---------QCHLKQAG 51 MGQKI+P FRLGV SRWFA Y LL ED KIR+++ L AG Sbjct: 1 MGQKIHPTGFRLGVTQEHRSRWFADPERYPELLQEDHKIRKFIATPHKFKDGNLDLTSAG 60 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPE 110 +A++ IER + V +ARPG+++G+ G+ IE + ++ I ++V EV + + Sbjct: 61 IAEVRIERKADQIDLEVRTARPGVVVGRGGSGIELLRTRLQQHLGGRSIRVNVVEVQRVD 120 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 A LIA+ IAQQLERRV FRR +++A+Q A R G +G+K+ SGRLNGAE++RTE E Sbjct: 121 AEAGLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGIEGIKIQVSGRLNGAEIARTEWTRE 180 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 GRVPL TLRA IDY A T YG GIKV+V + + + E + Sbjct: 181 GRVPLHTLRADIDYAYRTARTVYGILGIKVWVFKGEVIPGQEEPPSNREAQP 232 >gi|121534641|ref|ZP_01666462.1| ribosomal protein S3 [Thermosinus carboxydivorans Nor1] gi|121306661|gb|EAX47582.1| ribosomal protein S3 [Thermosinus carboxydivorans Nor1] Length = 215 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 90/197 (45%), Positives = 137/197 (69%), Gaps = 1/197 (0%) Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82 +A +Y LLHED+KIR++++ L AGV++I IER + +++A+PG++IG+ G Sbjct: 16 YAD-KDYAKLLHEDIKIRDFIKEKLYTAGVSRIEIERAANRVKATIHTAKPGMVIGRGGA 74 Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 IE+++++L + I +++ E+ +PE++ATL+A++IA QLERR+ FRRAMK+AV M Sbjct: 75 GIEELKQELRKLVGRNIDINIAEIKQPELDATLVAENIAAQLERRIAFRRAMKQAVTRTM 134 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 R GA G+KV+ SGRL GAE++RTE Y EG +PL TLRA IDYGTA A T YG G+KV++ Sbjct: 135 RMGAKGIKVMVSGRLGGAEIARTEQYREGSIPLHTLRADIDYGTAEAHTTYGRIGVKVWI 194 Query: 203 SLRDEVSDSDSTIPAAE 219 + + ++ E Sbjct: 195 YKGEVLPEAKKPAAVTE 211 >gi|108794922|gb|ABG20965.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma] Length = 252 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISRIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|161897986|gb|ABX80102.1| ribosomal protein S3 [Lilium sp. phytoplasma NECu1] Length = 216 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|306486203|gb|ADM92743.1| ribosomal protein S3 [Davidia involucrata] Length = 218 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQGHHSLWFAQPKNYSEGLQEDQKIRDSIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQMNLQKEFNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNSNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFIDEE 218 >gi|161897989|gb|ABX80104.1| ribosomal protein S3 [Lilium sp. phytoplasma Lix] Length = 215 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|7388189|sp|O66098|RS3_PHYS2 RecName: Full=30S ribosomal protein S3 gi|3047158|gb|AAC13665.1| ribosomal protein S3 [Phytoplasma sp. STRAWB2] Length = 252 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W+ E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWYVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T E++L+V EV + A LI Sbjct: 61 KEKNKNRITIFVHTAKPGVIIGKDGDTRNKLVVKLKELTQKEVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290487090|gb|ADD29929.1| ribosomal protein S3 [Ehretia acuminata] Length = 218 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N + ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQTNLQKEFNCVSRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218 >gi|32965374|gb|AAP91851.1| ribosomal protein S3 [Blueberry stunt phytoplasma] Length = 244 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + +K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFVKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHAAKPGVIIGKDGDTRNKLVVKLKELTKKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|62263397|gb|AAX78158.1| unknown protein [synthetic construct] Length = 224 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 98/190 (51%), Positives = 139/190 (73%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER Sbjct: 27 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 86 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +N +I +++AR G++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+ Sbjct: 87 AQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 146 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA Sbjct: 147 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 206 Query: 181 HIDYGTAVAE 190 +DY TA A Sbjct: 207 DVDYATAEAY 216 >gi|193211857|ref|YP_001997810.1| 30S ribosomal protein S3 [Chlorobaculum parvum NCIB 8327] gi|226697679|sp|B3QR86|RS3_CHLP8 RecName: Full=30S ribosomal protein S3 gi|193085334|gb|ACF10610.1| ribosomal protein S3 [Chlorobaculum parvum NCIB 8327] Length = 254 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 146/210 (69%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ G + +D IR Y+ LK+ AGV+K++IE Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYISARLKKEKAGVSKVVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG ++G+KG +I + ++L+ +T E+ + V EV KPEI A LI + Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELTRITGREVKIDVIEVIKPEIEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL TL Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 RA++DY + A T G+ GIKV+V + + Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVL 210 >gi|202070824|gb|ACH95368.1| ribosomal protein S3 [Mulberry dwarf phytoplasma] gi|226903427|gb|ACO90361.1| ribosomal protein S3 [Amaranth virescence phytoplasma] gi|229577480|gb|ACQ82715.1| ribosomal protein S3 [Mulberry dwarf phytoplasma] gi|229577487|gb|ACQ82719.1| ribosomal protein S3 [Mulberry dwarf phytoplasma] Length = 252 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTDKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290574717|gb|ADD46953.1| ribosomal protein S3 [Periwinkle leaf yellowing phytoplasma] Length = 252 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L++ EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNLLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|11467339|ref|NP_043196.1| ribosomal protein S3 [Cyanophora paradoxa] gi|133926|sp|P23401|RR3_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S3 gi|336647|gb|AAA63621.1| ribosomal protein s3 [Cyanophora paradoxa] gi|1016140|gb|AAA81227.1| ribosomal protein S3 [Cyanophora paradoxa] Length = 219 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 141/217 (64%), Gaps = 2/217 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLG+ S WFA +Y LL ED IR+Y++ +L AG+A+I I+R Sbjct: 1 MGQKIHPIGFRLGITQKHRSCWFANPKQYPTLLQEDHLIRQYIEKNLSNAGIAQIYIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 + + +ARPG+++G+ G IE +RK L ++ +I ++V EV + + A LI + Sbjct: 61 ADRIELELRTARPGVVVGRGGRGIEVLRKGLKDLLGEQKQIRINVIEVKQIDAEAALIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQLERRV FRR +++A+ A R G +G+K+ SGRLNGAE++R+E EGRVPLQTL Sbjct: 121 FITQQLERRVAFRRIVRKAITRAQRRGIEGIKIQISGRLNGAEIARSEWSREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 RA IDY A+T YG G+KV++ + + + + I Sbjct: 181 RAEIDYSYKRAQTIYGVLGVKVWIFKGEVIPGNPTEI 217 >gi|57234672|ref|YP_181224.1| 30S ribosomal protein S3 [Dehalococcoides ethenogenes 195] gi|91207651|sp|Q3Z975|RS3_DEHE1 RecName: Full=30S ribosomal protein S3 gi|57225120|gb|AAW40177.1| ribosomal protein S3 [Dehalococcoides ethenogenes 195] Length = 278 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 91/221 (41%), Positives = 142/221 (64%), Gaps = 1/221 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKGFAECLTEDLKLRKAIAKKYVDAAISQVDIERQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V +ARPG++IG+ G ++++R L + ++ L++ E+ + E++A L+A+S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEELIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV +RRAMK+A+ +M+ GA G+KV ASGRL G E++R E EGRVPL TLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKVCASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEH 220 IDYG A TA G GIKV+V D + + + + P Sbjct: 181 DIDYGCTRAHTALGDIGIKVWVYRGDILPEAKEQSEPEVTE 221 >gi|39938692|ref|NP_950458.1| 30S ribosomal protein S3 [Onion yellows phytoplasma OY-M] gi|7388193|sp|Q50267|RS3_ASTYP RecName: Full=30S ribosomal protein S3 gi|61215600|sp|Q6YR15|RS3_ONYPE RecName: Full=30S ribosomal protein S3 gi|285401|pir||B41839 ribosomal protein S3 - Oenothera mycoplasma-like organism gi|149869|gb|AAA25330.1| rps3 [Phytoplasma sp.] gi|37731403|gb|AAO74983.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731407|gb|AAO74986.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731425|gb|AAO74989.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731429|gb|AAO74992.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731433|gb|AAO74995.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731437|gb|AAO74998.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731441|gb|AAO75001.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731777|gb|AAO75004.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731809|gb|AAO75010.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|39721801|dbj|BAD04291.1| ribosomal protein S3 [Onion yellows phytoplasma OY-M] gi|89258039|gb|ABD65271.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|164506987|gb|ABY59730.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma] gi|224551880|gb|ACN54335.1| ribosomal protein S3 [Goldenrain phytoplasma] gi|297787443|gb|ADI52864.1| ribosomal protein S3 [Onion proliferation phytoplasma] gi|326368573|gb|ADZ55419.1| ribosomal protein S3 [Periwinkle phyllody phytoplasma] Length = 252 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|37731399|gb|AAO74980.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|323149121|ref|YP_004222685.1| ribosomal protein S3 [Anthriscus cerefolium] gi|289645614|gb|ADD13677.1| ribosomal protein S3 [Anthriscus cerefolium] Length = 218 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WF + Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFTQPKNYSEGLQEDQKIRYFINNYVQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPGGIEELQMNLQKEFNCVNRKLNITITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218 >gi|52220848|ref|YP_087004.1| ribosomal protein S3 [Panax ginseng] gi|68052925|sp|Q68RW8|RR3_PANGI RecName: Full=30S ribosomal protein S3, chloroplastic gi|51235351|gb|AAT98547.1| ribosomal protein S3 [Panax ginseng] Length = 219 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYVQKNMKISSSVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQMNLQKEFKSVNQKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218 >gi|37731817|gb|AAO75013.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMSFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|81301607|ref|YP_398903.1| ribosomal protein S3 [Nicotiana tomentosiformis] gi|91207772|sp|Q33BZ3|RR3_NICTO RecName: Full=30S ribosomal protein S3, chloroplastic gi|80750966|dbj|BAE48042.1| ribosomal protein S3 [Nicotiana tomentosiformis] Length = 218 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP Sbjct: 61 ARIEIKKRIDLIQVIIFMGFPKLLIESRPRGIEELQTTLQKEFNCVNRKLNIAVTRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDQE 218 >gi|225542944|emb|CAX63055.1| rps3 protein [Toona witches'-broom phytoplasma] Length = 252 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEFLPGQ 215 >gi|270307848|ref|YP_003329906.1| ribosomal protein S3 [Dehalococcoides sp. VS] gi|270153740|gb|ACZ61578.1| ribosomal protein S3 [Dehalococcoides sp. VS] Length = 278 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 90/218 (41%), Positives = 141/218 (64%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKGFAECLTEDLKLRKAIAKKYVDAAISQVDIERQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V +ARPG++IG+ G ++++R L + ++ L++ E+ + E++A L+A+S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEELIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV +RRAMK+A+ +M+ GA G+KV ASGRL G E++R E EGRVPL TLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKVCASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A TA G GIKV+V D + ++ + Sbjct: 181 DIDYGCTRAHTALGDIGIKVWVYRGDILPEAKEKSESE 218 >gi|37731801|gb|AAO75007.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTVKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|283795005|ref|YP_003359396.1| ribosomal protein S3 [Olea europaea] gi|281428724|gb|ADA69963.1| ribosomal protein S3 [Olea europaea] gi|291059291|gb|ADD72127.1| ribosomal protein S3 [Olea europaea] Length = 218 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYIQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A I I++ ++I++ P L+I + I++ +K N N ++++++ + KP Sbjct: 61 AHIEIQKRIDLIQVIIFMGFPKLLIENRPRGIQELQIHLEKEFNYVNQKLNVAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218 >gi|73748322|ref|YP_307561.1| 30S ribosomal protein S3 [Dehalococcoides sp. CBDB1] gi|289432370|ref|YP_003462243.1| ribosomal protein S3 [Dehalococcoides sp. GT] gi|91207652|sp|Q3ZZL8|RS3_DEHSC RecName: Full=30S ribosomal protein S3 gi|73660038|emb|CAI82645.1| ribosomal protein S3 [Dehalococcoides sp. CBDB1] gi|288946090|gb|ADC73787.1| ribosomal protein S3 [Dehalococcoides sp. GT] Length = 278 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 142/218 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + V +ARPG++IG+ G ++++R L ++ ++ L++ E+ + E++A L+A+S+ Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+ERRV +RRAMK+A+ +M+ GA G+K+ ASGRL G E++R E EGRVPL TLRA Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 IDYG A TA G GIKV+V D + ++ + Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESE 218 >gi|37731301|gb|AAO74977.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERX 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290487092|gb|ADD29930.1| ribosomal protein S3 [Ilex cornuta] Length = 218 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAPPKNYSEGLQEDQKIRDCIKNYVQKNSKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P +I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKFLIESRPRGIEELQMNLQKEFNGVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218 >gi|290487100|gb|ADD29934.1| ribosomal protein S3 [Nerium oleander] Length = 218 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYLEGLQEDQKIRDCIKNYVQKNMKISSALEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I++ P ++ + +E+++ +K N N ++++++ + KP Sbjct: 61 VRIEIQKRIDLIQVIIFMGFPKFLLESRPRGVEELQTTLQKEFNCMNRKLNIAIKRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ +A QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFLAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218 >gi|11497565|ref|NP_054973.1| ribosomal protein S3 [Spinacia oleracea] gi|133938|sp|P09595|RR3_SPIOL RecName: Full=30S ribosomal protein S3, chloroplastic gi|188036204|pdb|3BBN|C Chain C, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. gi|12310|emb|CAA31715.1| ribosomal protein S3 [Spinacia oleracea] gi|7636146|emb|CAB88766.1| ribosomal protein S3 [Spinacia oleracea] Length = 218 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WF++ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHYSLWFSQPKNYAEGLQEDQKIRDCIKNYVQKNTKTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + +E +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIHMGFPKLLIENRPQGVEDLKINVQKELNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGDPNILAEFIAGQLKSRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFMGEE 218 >gi|141818|gb|AAA21912.1| 5' end of coding region undetermined [Acholeplasma laidlawii] Length = 266 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+ +A + AL+ ED IRE+L + +AGV++I IER Sbjct: 2 MGQKTNPNGLRLGIIRTWESKRYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 61 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+ Sbjct: 62 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSNLEYLTKKEVILNIIEVRRPEKVAVLV 121 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL Sbjct: 122 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 181 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA +DY TA A T YG GIKV++ + + Sbjct: 182 TLRADVDYATAEASTTYGILGIKVWIYHGEVLPGQ 216 >gi|187251816|ref|YP_001876298.1| 30S ribosomal protein S3 [Elusimicrobium minutum Pei191] gi|226697709|sp|B2KEL5|RS3_ELUMP RecName: Full=30S ribosomal protein S3 gi|186971976|gb|ACC98961.1| Ribosomal protein S3 [Elusimicrobium minutum Pei191] Length = 239 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 142/227 (62%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINP RLG W SRWFA AL+ ED +IRE ++ K A ++ + IER Sbjct: 1 MGHKINPKGLRLGYTQDWQSRWFA-PKNMPALIIEDKRIRELIEERFKMAAISFVGIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 RI +++ARPG++IGKKG DIE++RK L MT S+ ++V E+ PE +A+L+AQSI Sbjct: 60 GAFLRINIHTARPGVVIGKKGADIEQLRKDLEKMTGSKTFVNVVEIKNPETDASLVAQSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Q+E+R + AMK+A++ A+ A G+K++ SGRL GAE++RTE EGRVPL TL A Sbjct: 120 CMQIEKRAHYGAAMKKAIEKALAGKALGIKIMVSGRLGGAEIARTEWKREGRVPLHTLCA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD--EVSDSDSTIPAAEHRVVEK 225 IDYGTA A T G G KV++ + S + +HR V + Sbjct: 180 EIDYGTAEAMTISGKIGCKVWIFKKTHFAKSPKEILHELRKHREVTE 226 >gi|94502529|ref|YP_588156.1| ribosomal protein S3 [Helianthus annuus] gi|122237664|sp|Q1KXS0|RR3_HELAN RecName: Full=30S ribosomal protein S3, chloroplastic gi|88656933|gb|ABD47184.1| ribosomal protein S3 [Helianthus annuus] Length = 218 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINPI FRLG +S WFA+ Y L ED KIR Y++ ++++ G+ Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P ++I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFNSVNRKLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIEGE 218 >gi|330850780|ref|YP_004376458.1| ribosomal protein S3 [Olea europaea subsp. europaea] gi|328795470|emb|CBR30352.1| ribosomal protein S3 [Olea europaea subsp. europaea] Length = 218 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYIQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A I I++ ++I++ P L+I + I++++ +K N N ++++++ + KP Sbjct: 61 AHIEIQKRIDLIQVIIFMGFPKLLIENRPRGIQELQINLEKEFNYVNQKLNVAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218 >gi|256261833|gb|ACU65956.1| ribosomal protein S3 [Mulberry yellow dwarf phytoplasma] Length = 252 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTDKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|225020392|ref|ZP_03709584.1| hypothetical protein CORMATOL_00399 [Corynebacterium matruchotii ATCC 33806] gi|224946781|gb|EEG27990.1| hypothetical protein CORMATOL_00399 [Corynebacterium matruchotii ATCC 33806] Length = 237 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 102/216 (47%), Positives = 145/216 (67%), Gaps = 3/216 (1%) Query: 13 GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72 G+ W S WFA EY L ED+KIR+YL +L +AG+A ++IERT RI +++AR Sbjct: 2 GITSDWKSHWFAD-KEYADYLAEDIKIRDYLTKNLDRAGIADVVIERTRDRVRIDIHTAR 60 Query: 73 PGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132 PG++IG++G++ +++R KL +T ++ L++ EV + NA L+AQSIA+QL RV FRR Sbjct: 61 PGIVIGRRGSEADRLRTKLEKLTRKQVALNILEVKNIDANAQLVAQSIAEQLTNRVAFRR 120 Query: 133 AMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191 AM++A+Q AM + G+KV+ +GRL GAE+SRTE Y EGRVPL TLRA IDYGT A T Sbjct: 121 AMRKAIQGAMRQPQVKGIKVMCAGRLGGAEMSRTERYHEGRVPLHTLRAEIDYGTYEAHT 180 Query: 192 AYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226 +G G+KV++ D V + +S + A R D Sbjct: 181 TFGRIGVKVWIYKGDVVGNRRESELNAPTERRGRGD 216 >gi|95114359|gb|ABF55684.1| ribosomal protein S3 [Wheat blue dwarf phytoplasma] Length = 233 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|156573699|gb|ABU85182.1| ribosomal protein S3 [Anethum graveolens] Length = 218 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WF + Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFKQPKNYSEGLQEDQKIRDFIKNYVQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPGGIEELQMNLQKEFNCVNRKLNITITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218 >gi|133923|sp|P29223|RS3_ACHLA RecName: Full=30S ribosomal protein S3 Length = 265 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+ +A + AL+ ED IRE+L + +AGV++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESKRYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+ Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSNLEYLTKKEVILNIIEVRRPEKVAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA +DY TA A T YG GIKV++ + + Sbjct: 181 TLRADVDYATAEASTTYGILGIKVWIYHGEVLPGQ 215 >gi|126680545|gb|ABO26489.1| ribosomal protein S3 [American potato purple top wilt phytoplasma] Length = 251 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+WFA E L+ ED IR+ + K++ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWFANDKEIPVLIKEDFLIRQLINNFSKKSSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG IIGK G + KI ++L +T I+L++ EV E + L+ Sbjct: 61 KEKTKNCITISIHTAKPGFIIGKDGENRNKIVEQLKKLTKKNINLNILEVKNSEKISLLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQSMAEQLENRMKFRRVQKLAIQKALKSGAKGIKVLISGRLNGDEIARSEGHSEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|307718212|ref|YP_003873744.1| 30S ribosomal protein S3 [Spirochaeta thermophila DSM 6192] gi|306531937|gb|ADN01471.1| 30S ribosomal protein S3 [Spirochaeta thermophila DSM 6192] Length = 234 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 136/211 (64%), Gaps = 2/211 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NP RLG+N TW S+WF +Y +LHEDL +R+ L K A V + I Sbjct: 1 MGQKVNPYGLRLGINKTWKSKWFVDLKDYAKVLHEDLLLRKRLLALPEAKAANVGDVEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + ++V++ RPG++IG KG IE+I +L M + ++ + + E+ +PE +A ++AQ Sbjct: 61 RHPQRVMLVVHTPRPGVLIGAKGATIERIGAELQKMVSKKLQIKIKEIKRPEAHAQVVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE R FRR MK AV +AM+ G G+KV SGRL GAE++R+E + GRVPL TL Sbjct: 121 NIAAQLEHRASFRRVMKLAVANAMKAGVQGIKVRVSGRLGGAEIARSEVQMAGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 RA IDYG A A T YG G+KV++ + + Sbjct: 181 RADIDYGFAEARTTYGVIGVKVWIFHGETLG 211 >gi|32965382|gb|AAP91857.1| ribosomal protein S3 [Leafhopper-borne phytoplasma] Length = 244 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKIWIFHGEALPGQ 215 >gi|300870641|ref|YP_003785512.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000] gi|300688340|gb|ADK31011.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000] Length = 245 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 17/243 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK++PI RLGVN TW+S+WF G Y LHEDL IR Y+ + + Sbjct: 1 MGQKVSPIGLRLGVNKTWSSKWFEDGRTYADSLHEDLSIRRYIMNYYYKTLKEEQKKIGG 60 Query: 50 ------AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 ++ I I R + + +AR G+++G KG +E ++ + + I++S+ Sbjct: 61 KKESFDPAISDIQIVRFPDRINVFISTARVGVVVGPKGQRVEAVKAAVQKLVKKPINVSI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +E+ + E++ATL AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++ Sbjct: 121 SEIKEAELDATLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 RTE Y G VPL T+RA+IDYGTA A T +G G+KV++ + + +S A + Sbjct: 181 RTEQYKNGSVPLHTIRANIDYGTAEASTTFGIIGVKVWIYKGEILDKKESKQDDAGKVIS 240 Query: 224 EKD 226 K Sbjct: 241 AKG 243 >gi|114329786|ref|YP_740604.1| ribosomal protein S3 [Platanus occidentalis] gi|122165999|sp|Q09G07|RR3_PLAOC RecName: Full=30S ribosomal protein S3, chloroplastic gi|114054424|gb|ABI49818.1| ribosomal protein S3 [Platanus occidentalis] Length = 217 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 79/217 (36%), Positives = 132/217 (60%), Gaps = 10/217 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA-------GVA 53 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+A Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFAQPKSYSEGLQEDQKIRDCIKNYVQKNKRIPLVEGIA 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPE 110 +I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 RIEIQKRIDLIQVIIYMGFPKLLIEDRPRGIEELQINLQKEFNSMNRKLNIAITRIAKPY 120 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E E Sbjct: 121 GQPNILAEYIAGQLKSRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIRE 180 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 GRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 217 >gi|290487108|gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina] Length = 218 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGIEELQMNIQKEFNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVGTIYGVLGIKIWIFIDEE 218 >gi|108794918|gb|ABG20962.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma] Length = 252 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKEPTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|86132550|ref|ZP_01051143.1| 30S ribosomal protein S3 [Dokdonia donghaensis MED134] gi|85816792|gb|EAQ37977.1| 30S ribosomal protein S3 [Dokdonia donghaensis MED134] Length = 239 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRRYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ QS+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIHEIKRPELDAFLVGQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ FRRA+K A+ +AMR A+G+K+ SGRLNGAE++RTE Y +GR+PL T RA Sbjct: 120 ARQIEGRISFRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARTESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|327402777|ref|YP_004343615.1| 30S ribosomal protein S3P [Fluviicola taffensis DSM 16823] gi|327318285|gb|AEA42777.1| SSU ribosomal protein S3P [Fluviicola taffensis DSM 16823] Length = 251 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 140/212 (66%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG W S W+ Y + ED KIR+YL L +A ++KI+IERT Sbjct: 1 MGQKTNPIGNRLGFIHGWESNWYGGD-NYKDKIIEDDKIRKYLHARLSRASISKIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A L+A I Sbjct: 60 LKLVTVTINTARPGVIIGKGGQEVDKLKEELKKLTKKEIQINIFEVKRPELDARLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ FRRA+K ++ S MR GA+G+KV SGRLNGAE++R+E Y +GR PL T RA Sbjct: 120 ARQIEARISFRRAIKMSIGSTMRMGAEGIKVKISGRLNGAEMARSEMYKDGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T YG GIKV++ + D Sbjct: 180 DIDYAVGEALTTYGLIGIKVWICKGEVYGRRD 211 >gi|225542954|emb|CAX63063.1| rps3 protein [Egyptian periwinkle phytoplasma] Length = 252 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK SGRL GAE++R+E + EG+VPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTFISGRLGGAEIARSEGHAEGKVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|158337816|ref|YP_001518992.1| 30S ribosomal protein S3 [Acaryochloris marina MBIC11017] gi|189044989|sp|B0C1D9|RS3_ACAM1 RecName: Full=30S ribosomal protein S3 gi|158308057|gb|ABW29674.1| 30S ribosomal protein S3 [Acaryochloris marina MBIC11017] Length = 241 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 2/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG+ SRWFA Y LL ED K+R Y+ +L AG+A + IER Sbjct: 1 MGQKIHPTGFRLGITQDHWSRWFADTDRYPELLQEDFKVRNYVNKNLSNAGIAGVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118 + V +ARPG+++G+ G+ IE +R L I ++V EV + + ATLIA+ Sbjct: 61 ADQIDLEVRTARPGVVVGRGGSGIESLRVGLQKELGDDRPIRINVVEVARVDAEATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I QQL RRV FRR +++A+Q A R G +G+K+ GRLNGAE++R+E EGRVPL TL Sbjct: 121 YIVQQLVRRVSFRRVVRQAIQRAQRAGVEGIKIQVGGRLNGAEIARSEWTREGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 RA+IDY A T YG G+KV+V + + +D E Sbjct: 181 RANIDYSYRTASTTYGILGVKVWVFKGEVIPGADEQPTNREP 222 >gi|146432294|gb|ABQ41131.1| ribosomal protein S3 [Czech Echinacea purpurea phyllody phytoplasma] Length = 220 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|159135072|gb|ABW88123.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/1] Length = 237 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|32965366|gb|AAP91845.1| ribosomal protein S3 [Clover phyllody phytoplasma] Length = 244 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKXSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|37731293|gb|AAO74971.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731297|gb|AAO74974.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K +Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMTIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|32965370|gb|AAP91848.1| ribosomal protein S3 [Clover phyllody phytoplasma] Length = 244 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|281422245|ref|ZP_06253244.1| ribosomal protein S3 [Prevotella copri DSM 18205] gi|281403750|gb|EFB34430.1| ribosomal protein S3 [Prevotella copri DSM 18205] Length = 243 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 146/220 (66%), Gaps = 1/220 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLGV W+S WF G +G L ED KIR+YL L +A +++I+IERT Sbjct: 1 MGQKVNPISNRLGVIRGWDSNWF-GGKNFGDNLVEDQKIRKYLNERLAKASISRIIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++AT++ ++I Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDATIVGKNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E + +RRA+K AV + MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA Sbjct: 120 ATQIEHMIAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 IDY A T G GIKV++ + +D T ++ Sbjct: 180 DIDYCQCEALTKVGLLGIKVWICRGEVYGKADLTPNFSQD 219 >gi|183217779|ref|YP_001837399.1| ribosomal protein S3 [Guizotia abyssinica] gi|179366294|gb|ACB86565.1| ribosomal protein S3 [Guizotia abyssinica] Length = 218 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINPI FRLG +S WFA+ Y L ED KIR Y++ ++++ G+ Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P ++I + IE+++ +K + N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFHSANRKLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIEGE 218 >gi|81176290|ref|YP_398367.1| ribosomal protein S3 [Lactuca sativa] gi|91207769|sp|Q332T8|RR3_LACSA RecName: Full=30S ribosomal protein S3, chloroplastic gi|78675208|dbj|BAE47634.1| chloroplast 30S ribosomal protein S3 [Lactuca sativa] gi|88657021|gb|ABD47271.1| ribosomal protein S3 [Lactuca sativa] Length = 218 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINPI FRLG +S WFA+ Y L ED KIR Y+Q ++++ G+ Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDKKIRTYIQNYVQKNMKTSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P ++I + IE+++ +K + N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFHSVNRKLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFIDGE 218 >gi|308191286|gb|ADO16226.1| ribosomal protein S3 [Lilac little leaf phytoplasma] Length = 237 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|32965362|gb|AAP91842.1| ribosomal protein S3 [Clover phyllody phytoplasma] Length = 244 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|283768456|ref|ZP_06341368.1| ribosomal protein S3 [Bulleidia extructa W1219] gi|283104848|gb|EFC06220.1| ribosomal protein S3 [Bulleidia extructa W1219] Length = 265 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 97/224 (43%), Positives = 138/224 (61%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W SRW+A S++G LL+ED +IR +L+ K A +++I IERT Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYADKSDFGDLLNEDNRIRGFLEKEFKDAYISRIEIERT 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 K ++I+ ARPG ++GK G + +RKKL +T + + V V P+++A L+ Sbjct: 61 GKKDAKVIIRCARPGALLGKDGDQDKMVVLRKKLGKLTGGKNVKIDVIAVANPDLDARLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA+QLE R FR A K+A+Q MR GA G+K +A GRL GAE++R E Y G VPL Sbjct: 121 ARRIAEQLEARQSFRIAQKKAIQQTMRSGAKGIKTLAKGRLGGAEIARQEGYSRGVVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLR+ IDY A T YG G+KV++ + + P A Sbjct: 181 TLRSDIDYSAQEATTTYGKLGVKVWICRGEVLPGQLVKEPEAPK 224 >gi|242620048|ref|YP_003002052.1| 30S ribosomal protein S3 [Aureococcus anophagefferens] gi|239997293|gb|ACS36816.1| 30S ribosomal protein S3 [Aureococcus anophagefferens] Length = 213 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 140/212 (66%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRL S WFA+ ++Y +LL +D KIREY+ + AG++ I IERT Sbjct: 1 MGQKVHPLGFRLNTTQKHKSTWFAQINQYSSLLEQDAKIREYITANYDSAGISDIEIERT 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLI 116 +K I +Y A+PG+II + G+ + + KKL ++ +I + V EV +P+ +A L+ Sbjct: 61 YKLNNIFLKIYVAKPGVIITESGSGLINLTKKLKSLLPRVNKISIDVFEVAEPDTHANLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ IA QL RRV F+RA+++A+ A G+KV +GRLNGAE++RTE EGR+PLQ Sbjct: 121 AQFIANQLVRRVAFKRAVRKAIDRAQAQDIKGIKVQIAGRLNGAEIARTEWVKEGRMPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY TA A+T YG G+KV++ + + Sbjct: 181 TLRAEIDYATASAKTIYGILGVKVWLFKGESM 212 >gi|32965390|gb|AAP91863.1| ribosomal protein S3 [Plantago virescence phytoplasma] gi|32965398|gb|AAP91869.1| ribosomal protein S3 [Chrysanthemum yellows phytoplasma] Length = 244 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|163786184|ref|ZP_02180632.1| putative 30S ribosomal protein S3 [Flavobacteriales bacterium ALC-1] gi|159878044|gb|EDP72100.1| putative 30S ribosomal protein S3 [Flavobacteriales bacterium ALC-1] Length = 238 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED K+R+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKVRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ L++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQLNIFEIKRPELDAHLVAASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIESRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSEHYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|317046211|ref|YP_004072500.1| ribosomal protein S3 [Corynocarpus laevigata] gi|309252928|gb|ADO60348.1| ribosomal protein S3 [Corynocarpus laevigata] Length = 218 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 134/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG N +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGANQGHHSLWFAQPQKYSEGLQEDQKIRDCIKNYVQKNMRIFSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKP 109 ++I I++ ++I+Y P L+I ++ +++ +K N N ++++++ + P Sbjct: 61 SRIEIQKRIDLIQVIIYMGFPKLLIEGGSRRIEELQMNVQKELNCVNQKLNIAITRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GRL+G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRLDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|32965394|gb|AAP91866.1| ribosomal protein S3 [Hydrangea phyllody phytoplasma] Length = 244 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKXRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290487120|gb|ADD29944.1| ribosomal protein S3 [Heuchera sanguinea] Length = 217 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 78/217 (35%), Positives = 129/217 (59%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + I + +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRRIEDLQMNVQKELNYVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDE 217 >gi|7388188|sp|O66095|RS3_PHYS1 RecName: Full=30S ribosomal protein S3 gi|3047153|gb|AAC13662.1| ribosomal protein S3 [Phytoplasma sp. STRAWB1] Length = 251 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKINP RLG+ TW+S+WF + E AL+ ED IRE + K++ +++I I+R Sbjct: 1 MGQKINPNGLRLGIIRTWDSQWFVQDKEIPALIKEDYLIRELINNFSKKSAISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T +I +++A+PG+IIG+ G K+ KL +T ++ L++ EV E A LI Sbjct: 61 KEKTKNRIKIYIHTAKPGVIIGRDGDTRNKMVAKLKELTQKDVDLNILEVKNSEKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA+QLE R+ FR K A+Q A++ G G+K + SGRLNGAE++R+E EGRVPL Sbjct: 121 AQNIAEQLENRMNFRHVQKMAIQKALKAGVKGIKTLVSGRLNGAEIARSEGNDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY + A T YG G+KV++ + + Sbjct: 181 TLRADIDYASLQAYTTYGVLGVKVWIFHGEVLPGQ 215 >gi|325126903|ref|YP_004286140.1| ribosomal protein S3 [Fragaria vesca subsp. vesca] gi|324022815|gb|ADY15389.1| ribosomal protein S3 [Fragaria vesca subsp. vesca] Length = 218 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 135/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSVWFAQPKNYSEDLQEDQKIRDCIKNYVQKNLKISSNVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I ++ IE+++ +K N N ++++++ ++ P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEERTRKIEELQFNVQKELNCVNRKLNIAITKIVNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E Sbjct: 121 YSHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYAVRTIYGVLGIKIWIFVDEE 218 >gi|315186325|gb|EFU20086.1| SSU ribosomal protein S3P [Spirochaeta thermophila DSM 6578] Length = 234 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 96/208 (46%), Positives = 135/208 (64%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NP RLG+N TW S+WF +Y +LHEDL +R+ L K A V + I Sbjct: 1 MGQKVNPYGLRLGINKTWKSKWFVDLKDYAKVLHEDLLLRKRLLALPEAKAANVGDVEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + ++V++ RPG++IG KG IE+I +L M + ++ + + E+ +PE +A ++AQ Sbjct: 61 RHPQRVMLVVHTPRPGVLIGAKGATIERIGAELQKMVSKKLQIKIKEIKRPEAHAQVVAQ 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE R FRR MK AV +AM+ G G+KV SGRL GAE++R+E + GRVPL TL Sbjct: 121 NIAGQLEHRASFRRVMKLAVANAMKAGVQGIKVRVSGRLGGAEIARSEVQMAGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206 RA IDYG A A T YG G+KV++ + Sbjct: 181 RADIDYGFAEARTTYGVIGVKVWIFHGE 208 >gi|166033620|gb|ABY78838.1| ribosomal protein S3 [Potato purple top phytoplasma YN-169] Length = 241 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR + K+ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRRLINDFNKKNSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++A+PG+IIGK G K+ +L +T +I+L++ EV PE A L+ Sbjct: 61 KEKTKNRITISIHTAKPGIIIGKDGETRNKLIAQLQKITQKDINLNILEVKNPEKTALLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E +GRVPL Sbjct: 121 AQSMAEQLENRMKFRRVQKMAIQKALKAGAKGIKVLVSGRLNGDEIARSEGSAKGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|298491404|ref|YP_003721581.1| 30S ribosomal protein S3 ['Nostoc azollae' 0708] gi|298233322|gb|ADI64458.1| ribosomal protein S3 ['Nostoc azollae' 0708] Length = 251 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 103/221 (46%), Positives = 141/221 (63%), Gaps = 7/221 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y+ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAVPDRYPELLQEDHKLRKYIDQKLGRYAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQELLGSNRQIRINVVEVQRVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 PL TLRA IDY A+T YG GIKV+V + + + T Sbjct: 181 PLHTLRADIDYSYCTAQTIYGILGIKVWVFKGEIIPGQEET 221 >gi|302337483|ref|YP_003802689.1| ribosomal protein S3 [Spirochaeta smaragdinae DSM 11293] gi|301634668|gb|ADK80095.1| ribosomal protein S3 [Spirochaeta smaragdinae DSM 11293] Length = 233 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 2/229 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK+NP+ RLG+N TW S+W+ EY LHEDL +R+ L+ + A ++ I I Sbjct: 1 MGQKVNPVGMRLGINKTWKSKWYVDPREYADTLHEDLALRKELESCPETQGADISDIEII 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 R + I+V ++RPG+IIG KG++IEKI +L + +I + + EV +PE +A +IA+ Sbjct: 61 RHPQRITIVVKTSRPGIIIGAKGSNIEKIGARLQKIAKKKIQIKIKEVKRPEADAQIIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA+QL+ R FRR +K AV AM+ G GVKV SGRL GAE+SR + EGRVPL TL Sbjct: 121 NIARQLKMRGAFRRTLKMAVSKAMQSGVQGVKVRISGRLGGAEMSRVAWHHEGRVPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 RA IDYG A + T +G G+KV+ + R + + Sbjct: 181 RADIDYGFAESRTTFGVIGVKVWTFNGEVYQKDQKEDAGLLVRKKREKT 229 >gi|296120753|ref|YP_003628531.1| ribosomal protein S3 [Planctomyces limnophilus DSM 3776] gi|296013093|gb|ADG66332.1| ribosomal protein S3 [Planctomyces limnophilus DSM 3776] Length = 233 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 93/227 (40%), Positives = 148/227 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FR+G+ W SRW+A E+G LL ED KIR +++ + AG+ +I IERT Sbjct: 1 MGQKVRPTGFRVGIVEDWRSRWYATKKEFGDLLIEDQKIRRFIKTKYEFAGIPRIEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPG+IIGKKG ++++++ +L ++T + L + E+ +P +A L+A+ I Sbjct: 61 RDQVIVHLHTARPGIIIGKKGQEVDRLKAELEDLTGRRMELKIVEIHQPHRSAVLVAEDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R FRR MKR++ M G +G+K+ +GRL GAE+SRTE + G +PL TL+ Sbjct: 121 AQQLVKRGSFRRVMKRSLDQVMESGVEGIKIEMNGRLGGAEMSRTEKAIRGSIPLSTLQK 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 HIDYG A+A+T G G+KV++ L + ++ +S A+ + + Sbjct: 181 HIDYGLAIAKTTMGVIGVKVWIDLGEYRNEEESYGADAQAGQAPQRA 227 >gi|126032123|gb|ABN71578.1| ribosomal protein S3 [Wheat blue dwarf phytoplasma] Length = 252 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKAPKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|116327230|ref|YP_796950.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327270|ref|YP_796990.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332116|ref|YP_801834.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280154|sp|Q04PU4|RS3_LEPBJ RecName: Full=30S ribosomal protein S3 gi|122284923|sp|Q055D8|RS3_LEPBL RecName: Full=30S ribosomal protein S3 gi|116119974|gb|ABJ78017.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120014|gb|ABJ78057.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125805|gb|ABJ77076.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 225 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 148/218 (67%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W+S WF++ +Y LHED+KIR+++Q AGV K++IER Sbjct: 1 MGQKVNPIGLRIGITRGWDSIWFSQS-DYKKNLHEDIKIRKFIQSRFSNAGVVKVVIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +++A+PG++IG+KG++IE ++K L MT ++L++ EV KPE A IA+SI Sbjct: 60 PEKINVNLHTAKPGIVIGQKGSNIEAVKKILKTMTEKPVNLNIIEVKKPETVAQCIAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R FRR MK+ ++ AMR G +G+K++ SGRLNGA+++R E Y EGR+PL TLRA Sbjct: 120 ALQIEQRQPFRRVMKQELRRAMRGGVEGIKILISGRLNGADMARRENYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 ID G A+T +G G+KV+ D + + + Sbjct: 180 KIDLGFKEAKTTFGQIGVKVWTYSGDFIQSKEESEEDK 217 >gi|24213445|ref|NP_710926.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Lai str. 56601] gi|45658697|ref|YP_002783.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|7388200|sp|Q9XD30|RS3_LEPIN RecName: Full=30S ribosomal protein S3 gi|61215617|sp|Q72NG7|RS3_LEPIC RecName: Full=30S ribosomal protein S3 gi|5163210|gb|AAD40589.1|AF115283_8 ribosomal protein S3 [Leptospira interrogans] gi|24194215|gb|AAN47944.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Lai str. 56601] gi|45601941|gb|AAS71420.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 225 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 148/218 (67%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+G+ W+S WF++ +Y LHED+KIR+++Q AGV K++IER Sbjct: 1 MGQKVNPIGLRIGITRGWDSIWFSQS-DYKKNLHEDIKIRKFVQNRFNNAGVVKVVIERF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + +++A+PG++IG+KG +IE ++K L MT+ ++L++ EV KPE A IA+SI Sbjct: 60 PEKINVNLHTAKPGIVIGQKGANIEAVKKILKTMTDKPVNLNIIEVKKPETVAQCIAESI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R FRR MK+ ++ AMR G +G+K++ SGRLNGA+++R E Y EGR+PL TLRA Sbjct: 120 ALQIEQRQPFRRVMKQELRRAMRGGVEGIKILISGRLNGADMARRENYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 ID G A+T +G G+KV+ D + + + Sbjct: 180 KIDLGFKEAKTTFGQIGVKVWTYSGDFIQSKEESEEDK 217 >gi|7525071|ref|NP_051096.1| ribosomal protein S3 [Arabidopsis thaliana] gi|139387290|ref|YP_001123411.1| ribosomal protein S3 [Capsella bursa-pastoris] gi|139389134|ref|YP_001123852.1| ribosomal protein S3 [Nasturtium officinale] gi|139389456|ref|YP_001123153.1| ribosomal protein S3 [Olimarabidopsis pumila] gi|6685913|sp|P56798|RR3_ARATH RecName: Full=30S ribosomal protein S3, chloroplastic gi|152060531|sp|A4QKN0|RR3_CAPBU RecName: Full=30S ribosomal protein S3, chloroplastic gi|152060538|sp|A4QLX1|RR3_NASOF RecName: Full=30S ribosomal protein S3, chloroplastic gi|152060539|sp|A4QJW9|RR3_OLIPU RecName: Full=30S ribosomal protein S3, chloroplastic gi|5881732|dbj|BAA84423.1| ribosomal protein S3 [Arabidopsis thaliana] gi|134286350|dbj|BAF49977.1| ribosomal protein S3 [Olimarabidopsis pumila] gi|134286611|dbj|BAF50235.1| ribosomal protein S3 [Capsella bursa-pastoris] gi|134287057|dbj|BAF50676.1| ribosomal protein S3 [Nasturtium officinale] Length = 218 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|139388948|ref|YP_001123675.1| ribosomal protein S3 [Lepidium virginicum] gi|152060536|sp|A4QLE4|RR3_LEPVR RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286878|dbj|BAF50499.1| ribosomal protein S3 [Lepidium virginicum] Length = 218 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKKYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|290487086|gb|ADD29927.1| ribosomal protein S3 [Aucuba japonica] Length = 218 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED K+R+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKLRDCIKNYVQKNMKIPSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMNLQKEFNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDQE 218 >gi|225542959|emb|CAX63067.1| rps3 protein [Chandigarh periwinkle phytoplasma] Length = 252 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W + E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVKNKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + E RVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAESRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|139389988|ref|YP_001123588.1| ribosomal protein S3 [Draba nemorosa] gi|152060534|sp|A4QL57|RR3_DRANE RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286790|dbj|BAF50412.1| ribosomal protein S3 [Draba nemorosa] Length = 218 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ +++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQNNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRIEELQINVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|290487084|gb|ADD29926.1| ribosomal protein S3 [Antirrhinum majus] Length = 220 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQNHHSLWFAQPKNYSEGLQEDQKIRDFIKNYVQKNMRISSGTEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A I I++ ++I++ P L+I + IE+++ +K + N ++++++ + KP Sbjct: 61 ACIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQINLQKEFHYVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELSEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT++A IDY + T YG GIKV++ + E Sbjct: 181 EGRVPLQTIQAKIDYCSYTVRTIYGVLGIKVWIFIDKE 218 >gi|212550445|ref|YP_002308762.1| 30S ribosomal protein S3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226697663|sp|B6YQ79|RS3_AZOPC RecName: Full=30S ribosomal protein S3 gi|212548683|dbj|BAG83351.1| 30S ribosomal protein S3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 245 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 101/225 (44%), Positives = 155/225 (68%), Gaps = 1/225 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+ W+S W YG +L+ED KIR+YL L +A V++I+IERT Sbjct: 1 MGQKINPISNRLGIIRGWDSNWCGGD-NYGDILYEDSKIRKYLNTRLAKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K ++V +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ KPE++A ++A +I Sbjct: 60 LKLVTVVVCTARPGVIIGKGGQEVDKLKEELKRITSKEVQINIFEIKKPELDAAIVASNI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+QLE ++ +R +K A+ +AMR GA+G+KV SGRLNG E++R+E Y EGR+PL TLRA Sbjct: 120 ARQLEAKIAYRHVIKVAIAAAMRMGAEGIKVQISGRLNGVEIARSEMYKEGRIPLHTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 +IDY + A T G G+KV++ + S D + A R + + Sbjct: 180 NIDYALSEALTKVGLLGVKVWICRGEVYSKQDFVVQFASQRGMNR 224 >gi|319952190|ref|YP_004163457.1| ssu ribosomal protein s3p [Cellulophaga algicola DSM 14237] gi|319420850|gb|ADV47959.1| SSU ribosomal protein S3P [Cellulophaga algicola DSM 14237] Length = 239 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 150/222 (67%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGIRLGIIRGWESNWY-GGNDYGDKLAEDNKIRKYVHARLAKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLITITITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDANLVAASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ FRRA+K A+ +AMR ++G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISFRRAIKMAIAAAMRMNSEGIKIQISGRLNGAEMARSETYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 IDY A T YG GIKV++ + D + + Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIMKGEVYGKRDLSPLVGMEKS 221 >gi|37731273|gb|AAO74956.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|119511173|ref|ZP_01630290.1| 30S ribosomal protein S3 [Nodularia spumigena CCY9414] gi|119464161|gb|EAW45081.1| 30S ribosomal protein S3 [Nodularia spumigena CCY9414] Length = 258 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 104/226 (46%), Positives = 143/226 (63%), Gaps = 8/226 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y++ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITREHQSRWFAVPERYPELLQEDYKLRQYIEKKLGKLAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + N +I ++V EV K + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRLGLQEVLGGNRQIRINVVEVQKVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 +LI + IAQQLERRV FRR +++A+Q A R G G+K+ SGRLNGAE++RTE EGRV Sbjct: 121 SLIGEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKIQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 PL TLRA IDY A+T YG GIKV+V + + + IPA Sbjct: 181 PLHTLRADIDYAYCTAKTIYGILGIKVWVFKGEIIPGQEE-IPAPP 225 >gi|290487098|gb|ADD29933.1| ribosomal protein S3 [Nelumbo nucifera] Length = 218 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ +++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNFVQKNMRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K + N ++++ + + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQINVQKEFHSVNRKLNIDITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYPVRTIYGVLGIKIWIFVDEE 218 >gi|37731204|gb|AAO74911.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|11466365|ref|NP_038368.1| ribosomal protein S3 [Mesostigma viride] gi|14548252|sp|Q9MUU2|RR3_MESVI RecName: Full=30S ribosomal protein S3, chloroplastic gi|7259508|gb|AAF43809.1|AF166114_21 ribosomal protein S3 [Mesostigma viride] Length = 213 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 139/210 (66%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLGV + WFA+ SEY L+ ED IR+YL L AGVA+I I+R Sbjct: 1 MGQKIHPLGFRLGVTQEHRAHWFAKPSEYKFLVEEDNYIRKYLNAKLANAGVARIDIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEINATLIAQ 118 I +Y+ARPGL++G+ G IE + + L + + +++ + +P++ +TLI + Sbjct: 61 ADQVEIEIYTARPGLVVGRTGKGIENLIRDLQDKLRNKRKFRITITYLQEPDLESTLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IAQ+L+ R FRRA+++AVQ A R G G+K+ +GRLNGAE++R+E EGRVPLQTL Sbjct: 121 FIAQRLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 RA IDY A+T YG GIKV++ +++ Sbjct: 181 RADIDYSHCQAKTIYGIIGIKVWIFKGEKI 210 >gi|21674992|ref|NP_663057.1| 30S ribosomal protein S3 [Chlorobium tepidum TLS] gi|27734498|sp|Q8KAH8|RS3_CHLTE RecName: Full=30S ribosomal protein S3 gi|21648225|gb|AAM73399.1| ribosomal protein S3 [Chlorobium tepidum TLS] Length = 253 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 104/210 (49%), Positives = 144/210 (68%), Gaps = 2/210 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG+ W SRW+ G + +D IR Y+ LK+ AG+AKI+IE Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYVHARLKKEKAGIAKIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +Y+ARPG I+G KG +I + ++L+ +T E+ + V EV KPEI A LI + Sbjct: 61 RTTKHIKINIYAARPGAIVGHKGEEINNLSQELTRITGKEVKIDVIEVIKPEIEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL TL Sbjct: 121 NIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 RA++DY + A T G+ GIKV+V + + Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVL 210 >gi|311062988|gb|ADP65742.1| ribosomal protein S3 [Gaillardia yellows phytoplasma] gi|311062992|gb|ADP65745.1| ribosomal protein S3 [Strawberry green petal phytoplasma SGP] Length = 252 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIK+++ + + Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215 >gi|313199740|ref|YP_004021354.1| ribosomal protein S3 [Theobroma cacao] gi|309321304|gb|ADO64847.1| ribosomal protein S3 [Theobroma cacao] gi|328924817|gb|ADO64928.2| ribosomal protein S3 [Theobroma cacao] Length = 218 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDKKIRDCIKNYVQKNLRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRPRKIEELQMNVQKELNCMNRKLNIAITRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIGAKIDYCSYRVRTIYGVLGIKIWIFIDEE 218 >gi|37731281|gb|AAO74962.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|34500952|ref|NP_904137.1| ribosomal protein S3 [Amborella trichopoda] gi|68052970|sp|Q70XX2|RR3_AMBTC RecName: Full=30S ribosomal protein S3, chloroplastic gi|34481667|emb|CAD45145.1| ribosomal protein S3 [Amborella trichopoda] Length = 218 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSLWFAQPKDYSRNLQEDEKIRDCIKNYVQKHMRISSGFQGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A++ I++ ++ +Y L+I IE+ +K N N +++++ + +P Sbjct: 61 ARLGIQKRIDLIQVTIYIGSSNLLIEGPTRGIEELRTDVQKKLNSMNRRLNITITRIARP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GRLNG E++R E Sbjct: 121 YEQPNILAEYIALQLKNRVSFRKAMKKAIELAEQANTKGIRVQIAGRLNGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPL T+RA IDY + + +T YG GIK+++ + +E Sbjct: 181 EGRVPLHTIRAKIDYCSYMVQTIYGVLGIKIWIFVDEE 218 >gi|282898351|ref|ZP_06306342.1| ribosomal protein S3 [Raphidiopsis brookii D9] gi|281196882|gb|EFA71787.1| ribosomal protein S3 [Raphidiopsis brookii D9] Length = 251 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 141/222 (63%), Gaps = 7/222 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ S WFA Y LL ED K+R+Y++ L AG+++I Sbjct: 1 MGQKIHPVGFRLGITQEHQSLWFAVPGRYPELLQEDHKLRQYIEQKLGRNAQNNAGLSEI 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + + +ARPG+++G+ G IE +R L + ++ ++ ++V EV K + +A Sbjct: 61 HIERKADQVDLELRTARPGVVVGRGGQGIEALRTGLQQLLGSHRQVRINVVEVQKVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 PL TLRA IDY A+T YG G+KV+V + + + + Sbjct: 181 PLHTLRADIDYSYCTAQTVYGILGVKVWVFKGEIIPGQEDIV 222 >gi|153012175|ref|YP_001381691.1| ribosomal protein S3 [Medicago truncatula] Length = 214 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 7/212 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA----GVAKIL 56 MGQKI+P+ FRLG +S WFA+ Y L ED IR+ ++ ++++ G+ +I Sbjct: 1 MGQKIHPLGFRLGTTQNHDSIWFAQPRNYSENLKEDKIIRDCIKNYIQKTPGVEGIGRIK 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINA 113 I++T ++I+Y P L+ K IE+++ + N +I+++ +P + Sbjct: 61 IKKTIDQIQVIIYMVLPTLLTEGKPRRIEELQTNVQKKLNCVTRKINITSTRIPNAYSDP 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 ++A+ IA QL+ R+ FR+A+K+A++ A + G GV+V +GR++G E++R E EGRV Sbjct: 121 NILAEFIAGQLKNRISFRKAIKKAIELAEQAGTKGVQVQIAGRIDGKEIARVEWIREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 PLQT+RA IDY + T YG GIKV++ L Sbjct: 181 PLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLN 212 >gi|85057796|ref|YP_456712.1| 30S ribosomal protein S3 [Aster yellows witches'-broom phytoplasma AYWB] gi|123738895|sp|Q2NIW0|RS3_AYWBP RecName: Full=30S ribosomal protein S3 gi|37731212|gb|AAO74917.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731216|gb|AAO74920.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731222|gb|AAO74923.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731226|gb|AAO74926.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731230|gb|AAO74929.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731234|gb|AAO74932.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731240|gb|AAO74935.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731244|gb|AAO74938.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731257|gb|AAO74944.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731261|gb|AAO74947.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731277|gb|AAO74959.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731285|gb|AAO74965.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731289|gb|AAO74968.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|84789901|gb|ABC65633.1| SSU ribosomal protein S3P [Aster yellows witches'-broom phytoplasma AYWB] gi|297787447|gb|ADI52867.1| ribosomal protein S3 [Onion proliferation phytoplasma] Length = 252 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290487132|gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides] Length = 218 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDKKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGIEELQINVQKDFNSVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|163752911|ref|ZP_02160035.1| putative 30S ribosomal protein S3 [Kordia algicida OT-1] gi|161326643|gb|EDP97968.1| putative 30S ribosomal protein S3 [Kordia algicida OT-1] Length = 240 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDANLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+KV SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKVQISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV+V + EV P Sbjct: 180 DIDYALHEAHTTYGRLGVKVWVM-KGEVYGKRELSP 214 >gi|157363448|ref|YP_001470215.1| ribosomal protein S3 [Thermotoga lettingae TMO] gi|189045342|sp|A8F4R7|RS3_THELT RecName: Full=30S ribosomal protein S3 gi|157314052|gb|ABV33151.1| ribosomal protein S3 [Thermotoga lettingae TMO] Length = 209 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 143/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLGV+ W +RWF Y L ED +IR+ ++ QAG++++ IER Sbjct: 1 MGQKVHPRGFRLGVSADWQTRWF-NEKNYATWLKEDEEIRKVVKNAYSQAGISEVFIERP 59 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I + +ARPG+IIGKKG +I K+R+ L N + ++V E+ PE +A L+A++ Sbjct: 60 DNESVTITIKTARPGVIIGKKGAEIGKLREDLEKELNRRVIVNVEEIKTPETDAQLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++RAMKRA+ A+R GA GVKV+ SGRL GAE++R E YL GR+PLQT+R Sbjct: 120 IAGRIEKRASYKRAMKRALSDALRKGATGVKVMVSGRLAGAEIARREWYLRGRLPLQTVR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A +DYGTA A+T YG+ GIKV++ D Sbjct: 180 AVVDYGTATAKTKYGTIGIKVWIYKGD 206 >gi|330850668|ref|YP_004376549.1| ribosomal protein S3 [Ptilidium pulcherrimum] gi|302024797|gb|ADK89643.1| ribosomal protein S3 [Ptilidium pulcherrimum] Length = 217 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ + +S WFA+ Y L D KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQSHHSYWFAKPKNYSKLFEGDKKIRNCIEFYVRKHIRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A++ I+R ++ +Y+ P L++ +G IE+ + + N N + L++ E+ KP Sbjct: 61 ARVEIQRKTDLIQVEIYTGFPALLVENRGRGIEQLKTDVQNVLNPVNRRLRLTLVEIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR M++A++ A + G+K+ +GRLNGAE++R E Sbjct: 121 YEEPNILAEYIALQLESRVAFRRTMRKAIELAKKGNIGGIKIQIAGRLNGAEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA I+Y A+T YG GIKV++ + Sbjct: 181 EGRVPLQTIRARINYCYYAAQTIYGVLGIKVWIFQNE 217 >gi|37731208|gb|AAO74914.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAXEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|332170565|gb|AEE19820.1| ribosomal protein S3 [Krokinobacter diaphorus 4H-3-7-5] Length = 240 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRRYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ QS+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIHEIKRPELDAFLVGQSV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ FRRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIEGRISFRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|147883190|gb|ABQ51889.1| ribosomal protein S3 [Salinibacter ruber] gi|147883192|gb|ABQ51890.1| ribosomal protein S3 [Salinibacter ruber] gi|147883196|gb|ABQ51892.1| ribosomal protein S3 [Salinibacter ruber] gi|147883198|gb|ABQ51893.1| ribosomal protein S3 [Salinibacter ruber] gi|147883200|gb|ABQ51894.1| ribosomal protein S3 [Salinibacter ruber] gi|147883202|gb|ABQ51895.1| ribosomal protein S3 [Salinibacter ruber] gi|147883204|gb|ABQ51896.1| ribosomal protein S3 [Salinibacter ruber] Length = 219 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 154/220 (70%), Gaps = 2/220 (0%) Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67 I FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT + + Sbjct: 1 IGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERTPERVILT 59 Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 ++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I QQLE R Sbjct: 60 LHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNIVQQLEGR 119 Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 + FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA ID+ Sbjct: 120 ISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRADIDFAQE 179 Query: 188 VAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226 A T YG+ G+KV++ + + S A+ R +++ Sbjct: 180 TALTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 219 >gi|89891144|ref|ZP_01202652.1| 30S ribosomal protein S3 (rpsC) [Flavobacteria bacterium BBFL7] gi|89516788|gb|EAS19447.1| 30S ribosomal protein S3 (rpsC) [Flavobacteria bacterium BBFL7] Length = 240 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G ++++++++L +T ++ ++++E+ +PE++A L+ S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDRLKEELKKITGKDVQINIHEIKRPELDAFLVGASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|290487122|gb|ADD29945.1| ribosomal protein S3 [Liquidambar styraciflua] Length = 218 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDKKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L++ + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLMEGRPRRIEELQMLVQKEFNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDKE 218 >gi|139389680|ref|YP_001123237.1| ribosomal protein S3 [Arabis hirsuta] gi|152060529|sp|A4QK56|RR3_ARAHI RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286435|dbj|BAF50061.1| ribosomal protein S3 [Arabis hirsuta] Length = 218 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|37731253|gb|AAO74941.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|17231701|ref|NP_488249.1| 30S ribosomal protein S3 [Nostoc sp. PCC 7120] gi|27734518|sp|Q8YPI5|RS3_ANASP RecName: Full=30S ribosomal protein S3 gi|17133344|dbj|BAB75908.1| 30S ribosomal protein S3 [Nostoc sp. PCC 7120] Length = 260 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 7/219 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA S Y LL ED K+R+Y++ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + N +I ++V EV + + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A + G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 PL TLRA IDY A+T YG GIKV+V + + + Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQE 219 >gi|32475064|ref|NP_868058.1| 30S ribosomal protein S3 [Rhodopirellula baltica SH 1] gi|61215693|sp|Q7UN14|RS3_RHOBA RecName: Full=30S ribosomal protein S3 gi|32445604|emb|CAD75605.1| 30S ribosomal protein S3 [Rhodopirellula baltica SH 1] gi|327540584|gb|EGF27159.1| 30S ribosomal protein S3 [Rhodopirellula baltica WH47] Length = 236 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 103/232 (44%), Positives = 143/232 (61%), Gaps = 8/232 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH-----LKQAGVAKI 55 MGQK+NPI FR GV W SRW+A ++ LL ED KIRE++ H K AG+ +I Sbjct: 1 MGQKVNPIAFRTGVTRGWGSRWYASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRI 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 IERT R+++Y ARPGLIIGKKG +IE ++ +L N+ I+L V EV +PE+ A L Sbjct: 61 EIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQNLVGRRINLKVEEVGRPELQAQL 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 +A+ I+QQL +R FRR MKR ++ M GA G+K+ +GRL GAE++R E G +PL Sbjct: 121 VAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGIKIQMAGRLGGAEMARREKQSAGSIPL 180 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVS---LRDEVSDSDSTIPAAEHRVVE 224 TL+A IDYG A T G GI+V+++ D+ +D+ A + Sbjct: 181 STLQAKIDYGFTEAMTPQGHIGIQVWINQGTYGDDNDGADAQTGQASKKPKR 232 >gi|204304432|gb|ACH99108.1| ribosomal protein S3 [Willow yellow phytoplasma] Length = 252 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 97/227 (42%), Positives = 138/227 (60%), Gaps = 7/227 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKSSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEH 220 TLRA IDY A T YG GIK+++ + + D+ IP A Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQTILDTRIPFASQ 227 >gi|160902250|ref|YP_001567831.1| ribosomal protein S3 [Petrotoga mobilis SJ95] gi|160359894|gb|ABX31508.1| ribosomal protein S3 [Petrotoga mobilis SJ95] Length = 210 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 3/210 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K++P FRLG N TW S WF Y LHED KIR+Y++ + + AG+++ILIER Sbjct: 1 MGSKVHPNGFRLGNNKTWKSVWF-NEKNYSDYLHEDEKIRDYIKSNYEAAGISEILIERP 59 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQ 118 + RI +Y AR G++IG+KG +++KIR L N+ I + EV P + A LIA+ Sbjct: 60 SDSSIRIDIYGARLGILIGRKGAEMKKIRDDLKNIVGDKNIKVYAEEVKNPYVVAQLIAE 119 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 ++ QL+RRV + AMKRA+ +AMR GA GVK++ SGRL GAE++RTE Y+EGR+PLQTL Sbjct: 120 DVSGQLQRRVSHKVAMKRAITNAMRRGAKGVKIMVSGRLGGAEIARTEWYMEGRLPLQTL 179 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 R++IDY ++T YG+ GIKV+V D + Sbjct: 180 RSNIDYAVVHSQTKYGTIGIKVWVYHGDTL 209 >gi|139389839|ref|YP_001123500.1| ribosomal protein S3 [Crucihimalaya wallichii] gi|152060533|sp|A4QKW9|RR3_CRUWA RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286701|dbj|BAF50324.1| ribosomal protein S3 [Crucihimalaya wallichii] Length = 218 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 131/217 (60%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNKKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+ A IDY ++ T YG GIK+++ + + Sbjct: 181 EGRVPLQTIEAKIDYCSSTVRTIYGVLGIKIWIFVDE 217 >gi|149371635|ref|ZP_01891051.1| 30S ribosomal protein S3 [unidentified eubacterium SCB49] gi|149355262|gb|EDM43822.1| 30S ribosomal protein S3 [unidentified eubacterium SCB49] Length = 240 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ SI Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIHEIKRPEMDAHLVGSSI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +A+R A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAIRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|282899958|ref|ZP_06307919.1| ribosomal protein S3 [Cylindrospermopsis raciborskii CS-505] gi|281195228|gb|EFA70164.1| ribosomal protein S3 [Cylindrospermopsis raciborskii CS-505] Length = 251 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 141/222 (63%), Gaps = 7/222 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ S WFA Y LL ED K+R+Y++ L AG+++I Sbjct: 1 MGQKIHPVGFRLGITQEHQSLWFAVPGRYPELLQEDHKLRQYIEQKLGRNAQNNAGLSEI 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + + +ARPG+++G+ G IE +R L + ++ ++ ++V EV K + +A Sbjct: 61 HIERKADQVDLELRTARPGVVVGRGGQGIEALRTGLQQLLGSHRQVRINVVEVQKVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 PL TLRA IDY A+T YG GIKV+V + + + + Sbjct: 181 PLHTLRADIDYSYCTAQTVYGILGIKVWVFKGEIIPGQEDIV 222 >gi|139388132|ref|YP_001123324.1| ribosomal protein S3 [Barbarea verna] gi|152060530|sp|A4QKE3|RR3_BARVE RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286523|dbj|BAF50148.1| ribosomal protein S3 [Barbarea verna] Length = 218 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 129/217 (59%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K ++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELRMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+ A IDY + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217 >gi|37731265|gb|AAO74950.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ K +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKPKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|290487118|gb|ADD29943.1| ribosomal protein S3 [Gunnera manicata] Length = 218 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNCIKNYIQKNIKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + +E+++ +K N N ++++++ + KP Sbjct: 61 ARIEIKKRIDLIQVIIYMGFPKLLIEGRPQGVEELQINVQKEFNSVNKKLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|30468188|ref|NP_849075.1| ribosomal protein S3 [Cyanidioschyzon merolae strain 10D] gi|34924922|sp|Q85FV7|RR3_CYAME RecName: Full=30S ribosomal protein S3, chloroplastic gi|30409288|dbj|BAC76237.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D] Length = 205 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 134/206 (65%), Gaps = 3/206 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ T S WFA +Y +L ED IR+ L+ ++ +AG+A+I I R Sbjct: 1 MGQKTHPVGFRLGITHTHQSHWFAH--QYSKILQEDHAIRQLLRDYVLKAGIARIHILRK 58 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + ++ ARPG+++G+ G ++ + + + +S+ EV P+ NA L+AQ Sbjct: 59 SHQIELELHLARPGILVGRSGLGLDNLRTQLQTKWPHLTWRISLVEVSNPDANAVLLAQW 118 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +AQQLE+R+ FRRA+++A+ A + G G+K+ SGRLNGAE++R+E G++PLQTLR Sbjct: 119 LAQQLEKRIAFRRAIRQAMARAQKVGVKGIKIQVSGRLNGAEIARSEWVRHGQIPLQTLR 178 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205 A I+Y A A T YG G+KV+++ + Sbjct: 179 APINYAIANAYTTYGVIGVKVWINPK 204 >gi|315283841|ref|ZP_07871902.1| ribosomal protein S3 [Listeria marthii FSL S4-120] gi|313612515|gb|EFR86596.1| ribosomal protein S3 [Listeria marthii FSL S4-120] Length = 202 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 135/203 (66%), Gaps = 1/203 (0%) Query: 17 TWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLI 76 W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER I +++A+PG++ Sbjct: 1 DWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMV 59 Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV FRRA K+ Sbjct: 60 IGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQ 119 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG Sbjct: 120 AIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKL 179 Query: 197 GIKVYVSLRDEVSDSDSTIPAAE 219 G+KV++ + + + + + Sbjct: 180 GVKVWIYRGEVLPTKKNNVEGGK 202 >gi|283780380|ref|YP_003371135.1| 30S ribosomal protein S3 [Pirellula staleyi DSM 6068] gi|283438833|gb|ADB17275.1| ribosomal protein S3 [Pirellula staleyi DSM 6068] Length = 237 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 103/233 (44%), Positives = 147/233 (63%), Gaps = 9/233 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH-----LKQAGVAKI 55 MGQK++PI FR G+ W SRW+A EY LL ED KIRE+++ H + AG+ +I Sbjct: 1 MGQKVHPIGFRTGIMIGWKSRWYASKKEYANLLLEDKKIREFVKNHPSKTQYRSAGIDRI 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 IERT +++++ ARPG+IIGKKG ++E ++++L N+T I+L + E+ +PEI A L Sbjct: 61 EIERTRDEVKVVLFVARPGVIIGKKGQEVEILQEELQNLTGRRINLKIEEIARPEIQAQL 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 IA+ IAQQL +R FRR +KRA++ M GA GVK+ +GRL GAE++R E G +PL Sbjct: 121 IAEEIAQQLSKRASFRRTLKRAIEQTMDAGAKGVKIQLAGRLGGAEMARCEKATAGSLPL 180 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYV----SLRDEVSDSDSTIPAAEHRVVE 224 TLRA IDYG A TA G G++V+V D + +D+ A + Sbjct: 181 STLRAKIDYGFTEAMTAQGHIGVQVWVNQGMFEGDASNGADAQTSEAPKKPKR 233 >gi|38426848|gb|AAR20470.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 235 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K++ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRSSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++ L++ K KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTPNQELLLAKMVKLRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|186684504|ref|YP_001867700.1| 30S ribosomal protein S3 [Nostoc punctiforme PCC 73102] gi|226697737|sp|B2ITP9|RS3_NOSP7 RecName: Full=30S ribosomal protein S3 gi|186466956|gb|ACC82757.1| ribosomal protein S3 [Nostoc punctiforme PCC 73102] Length = 260 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 7/220 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55 MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y++ L AG++++ Sbjct: 1 MGQKIHPVGFRLGITHEHQSRWFAVPDRYPELLQEDYKLRQYIEQKLGRLAQNNAGISEV 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113 IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQGLLGSNRQIRINVVEVQRVDADA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LIA+ IAQQLERRV FRR +++++Q A R G G+K+ SGRLNGAE++RTE EGRV Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQSIQRAQRAGVQGIKIQVSGRLNGAEIARTEWTREGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 PL TLRA IDY A+T YG GIKV+V + + + Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEP 220 >gi|218961427|ref|YP_001741202.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas acidaminovorans] gi|167730084|emb|CAO80996.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas acidaminovorans] Length = 215 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 100/214 (46%), Positives = 141/214 (65%), Gaps = 6/214 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+L+RLGVN S WFA+G+ Y L ED+KIR Y++ L V+++ I R Sbjct: 1 MGQKIHPVLYRLGVNKETESIWFAQGTSYVDFLQEDIKIRNYIRKRLSDKMVSRVQISRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE------IHLSVNEVPKPEINAT 114 + I +Y+ARPGL+IGKKG DI+K+R +L+ N + + +++ + K ++A Sbjct: 61 TSSIIIDIYTARPGLVIGKKGEDIDKLRNELNVFINKDRKNPISVSINIEPIDKMWLDAR 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 L+AQ IA+QLE R+ FRRAMK A++ M+ A GVKV SGRL GAE++R+E Y +GR P Sbjct: 121 LVAQEIARQLEERISFRRAMKMAIRYVMKENAQGVKVQVSGRLGGAEIARSERYKQGRTP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 L TLRA IDY A T YG G+KV++ D + Sbjct: 181 LHTLRADIDYANVEANTTYGVIGVKVWIYKGDIL 214 >gi|38426836|gb|AAR20461.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 234 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K++ +++I I+R Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRSSISQIEIQRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 T I +++ L++ K KI+ +L +T +I+L++ EV P+ A L+ Sbjct: 61 KEKTKNRITITIHTPNQELLLAKMVKLRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|315320571|ref|YP_004072628.1| 30S ribosomal protein S3 [Thalassiosira oceanica CCMP1005] gi|283569044|gb|ADB27581.1| 30S ribosomal protein S3 [Thalassiosira oceanica CCMP1005] Length = 214 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 4/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FRLG+ S W+A Y LL ED +IR YL K A ++ + I R Sbjct: 1 MGQKTHPLGFRLGITQEHRSSWYANFKHYSTLLKEDDQIRTYLNKFAKFASISNVHINRN 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116 +I + + RPG+++G G+ I+ + + N +I ++V EV NA+LI Sbjct: 61 GLGDQIELNIETGRPGILVGDNGSQIKTLATNIKKFLPDNHQITINVIEVENINSNASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A + QQLE RV FRRA++ ++ A +G+K+ SGRLNGAE++R+E EGRVPLQ Sbjct: 121 ADLVVQQLEDRVAFRRAIREGLKCAQDNQVNGIKIEVSGRLNGAEMARSEWIREGRVPLQ 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 TLRA IDY T A T YG G+KV++ + + Sbjct: 181 TLRADIDYATKEANTIYGVLGVKVWLFKNEIL 212 >gi|147883194|gb|ABQ51891.1| ribosomal protein S3 [Salinibacter ruber] Length = 219 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 92/220 (41%), Positives = 153/220 (69%), Gaps = 2/220 (0%) Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67 I FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT + + Sbjct: 1 IGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERTPERVILT 59 Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 ++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I QQLE R Sbjct: 60 LHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNIVQQLEGR 119 Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 + FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA ID+ Sbjct: 120 ISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRADIDFAQE 179 Query: 188 VAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226 T YG+ G+KV++ + + S A+ R +++ Sbjct: 180 TVLTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 219 >gi|262400803|gb|ACY66292.1| ribosomal protein S3 [Brassica napus] Length = 218 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSIWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRIEELQMNVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|260061903|ref|YP_003194983.1| 30S ribosomal protein S3 [Robiginitalea biformata HTCC2501] gi|88786036|gb|EAR17205.1| putative 30S ribosomal protein S3 [Robiginitalea biformata HTCC2501] Length = 236 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLAKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLITVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDANLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIESRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALHEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|87306532|ref|ZP_01088679.1| 30S ribosomal protein S3 [Blastopirellula marina DSM 3645] gi|87290711|gb|EAQ82598.1| 30S ribosomal protein S3 [Blastopirellula marina DSM 3645] Length = 240 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 15/240 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL--------QCHLKQAGV 52 MGQK+NPI FR GV W SRWFA +Y LL ED +IR+++ + + AG+ Sbjct: 1 MGQKVNPIAFRTGVMQGWKSRWFASKKDYADLLFEDQRIRKFIGGHPDEKIRQKYRNAGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 +I I+RT ++ ++ ARPGLIIG+KG ++EK++++L N+ I++ + E+ +PE+ Sbjct: 61 DRIEIDRTRDEVKVTLFVARPGLIIGQKGQEVEKLQEELQNLVGRRINMKIEEIGRPELR 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+A+ IA QL +R FRR MKRA++S M GA G+KV +GRL GAE++R E ++G Sbjct: 121 AQLVAEDIADQLAKRSSFRRTMKRALESTMEAGARGIKVQLAGRLGGAEMARREKAIQGS 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-------DEVSDSDSTIPAAEHRVVEK 225 +PL T+RA IDYG A+TA G G++V+++ D + ++ P + ++ Sbjct: 181 IPLSTIRAKIDYGFTEAKTAQGHIGVQVWINNGFYEENESDVANAAEGQAPKKSKKAYKR 240 >gi|298207733|ref|YP_003715912.1| putative 30S ribosomal protein S3 [Croceibacter atlanticus HTCC2559] gi|83850370|gb|EAP88238.1| putative 30S ribosomal protein S3 [Croceibacter atlanticus HTCC2559] Length = 236 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 148/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIFEIKRPELDAHLVGASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ +GRLNGAE++R E Y EGR+PL T RA Sbjct: 120 ARQVENRISYRRAIKMAIAAAMRMNAEGIKIQIAGRLNGAEMARVESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A+T YG GIKV++ + EV P Sbjct: 180 DIDYALVEAQTTYGKLGIKVWIM-KGEVYGKRELSP 214 >gi|120437168|ref|YP_862854.1| 30S ribosomal protein S3 [Gramella forsetii KT0803] gi|152060864|sp|A0M592|RS3_GRAFK RecName: Full=30S ribosomal protein S3 gi|117579318|emb|CAL67787.1| 30S ribosomal protein S3 [Gramella forsetii KT0803] Length = 239 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 96/216 (44%), Positives = 149/216 (68%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+ S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAHLVGASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIEISGRLNGAEMARSESYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG G+KV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214 >gi|139390190|ref|YP_001123763.1| ribosomal protein S3 [Lobularia maritima] gi|152060537|sp|A4QLN2|RR3_LOBMA RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286967|dbj|BAF50587.1| ribosomal protein S3 [Lobularia maritima] Length = 218 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMTVQKELNCVNRKLNIAITRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|730656|sp|P41117|RS3_ACHAX RecName: Full=30S ribosomal protein S3 gi|456690|gb|AAA21916.1| ribosomal protein S3 [Acholeplasma axanthum] Length = 257 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 6/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK+NPI FR+GV W+S+W+A AL+ ED IR++L A V+ + IER Sbjct: 1 MGQKVNPIGFRVGVIRDWDSKWYADKKIVPALVKEDAVIRKFLNKKYNNAAVSHVEIERL 60 Query: 60 ----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 K +I ++S +PG++IG++ +++ L +T EI +V EV KPE+ ATL Sbjct: 61 KELKVKKRVKITLHSGKPGVVIGREAATMKETIASLEKLTKKEIVFNVVEVRKPEVVATL 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 +AQS+A+QLE R FR++ K +++ A G+K S RL G E++RTE Y EG+VPL Sbjct: 121 VAQSMAEQLENRASFRKSTKNCYAKSIKVRAKGIK-TLSQRLGGREMARTEGYSEGQVPL 179 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 TLRA ++Y TA A+T YG GIKV++ + + E + + Sbjct: 180 HTLRADVEYATAEAQTTYGILGIKVWIYHGEILPGQSHEELRKERQSSASSN 231 >gi|126680568|gb|ABO26504.1| ribosomal protein S3 [Candidatus Phytoplasma pyri] Length = 245 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ +W+S+WFA + +HED IR ++ + +A ++KI IER+ Sbjct: 1 MGQKSNPNGLRLGIIKSWDSKWFANFKKTPQFIHEDFCIRNFINKNYSKALISKIEIERS 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K + I ++ + +I GK ++KI K++ +T E+ +V E+ P+ A L+ Sbjct: 61 KKKDKEVIKINLHVVKTNIINGKDNESLKKITKQIEKITKKEVVFNVIEIKNPDKVAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+E YLEGRVPL Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQKVLKTGVKGVKTLISGRLGGLEMARSEGYLEGRVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA ++Y A T YGS G+KV++ D + Sbjct: 181 TFRADVEYAFTEAHTTYGSFGVKVWIFHGDVLPGE 215 >gi|88608356|ref|YP_506163.1| ribosomal protein S3 [Neorickettsia sennetsu str. Miyayama] gi|123722758|sp|Q2GED3|RS3_NEOSM RecName: Full=30S ribosomal protein S3 gi|88600525|gb|ABD45993.1| ribosomal protein S3 [Neorickettsia sennetsu str. Miyayama] Length = 211 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 133/209 (63%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRL + + S W+++ +Y + ED + +Y++ G++K++I+R Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTKYVESSFAHIGISKVIIKRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +C I ++ +PGLIIGKKG D+E R KL+ L+V EV KP +A L+A+SI Sbjct: 61 GASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A QLE+R FRR +K+A+ + MR GVKV SGRL+GAE++RTE + EG +PL T+R Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 A IDY A A T YG G+KV++ + Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209 >gi|157325568|ref|YP_001468346.1| ribosomal protein S3 [Ipomoea purpurea] gi|171769956|sp|A7Y3I9|RR3_IPOPU RecName: Full=30S ribosomal protein S3, chloroplastic gi|157056796|gb|ABV02386.1| ribosomal protein S3 [Ipomoea purpurea] Length = 218 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 130/217 (59%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR +++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSESLQEDQKIRNFIKNYVQKNMITSSGVTGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + +++ +K N N ++++++ + KP Sbjct: 61 ARIDIQKGIDLIKVIIFMGFPKLLIENRPRATEELQMTLQKELNCVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E Sbjct: 121 YGNPKILAEFIAGQLKNRVSFRKAMKKAIELAEKADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVP QT+RA IDY + T YG GIK+++ L + Sbjct: 181 EGRVPRQTIRAKIDYCSYPVRTIYGVLGIKIWIFLDE 217 >gi|290487124|gb|ADD29946.1| ribosomal protein S3 [Oxalis latifolia] Length = 223 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 131/219 (59%), Gaps = 11/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQK NP+ FRLG +S WFA+ + LHED KIR ++ ++++ G+ Sbjct: 1 MGQKTNPLGFRLGTTQGHHSLWFAQPRNFSESLHEDQKIRNCIKNYVQKNTRVFSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +II+Y P L+I + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIKKKIDLIQIIIYMGFPKLLIEGRPRRIEELQTNVQKELNCLNQKLNIAIIRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 EGRVPLQT+RA I+Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIEYCSYTVRTIYGVLGIKIWIFIDEEK 219 >gi|313183860|ref|YP_004021703.1| ribosomal protein S3 [Prunus persica] gi|309321472|gb|ADO65013.1| ribosomal protein S3 [Prunus persica] Length = 218 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGGTQGHHSLWFAQPKNYSEDLQEDQKIRDCIKNYVQKNMKISSNVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRTRRIEELQMNVQKELNCVNRKLNIAIRRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCAYAVRTIYGVLGIKIWIFVDEE 218 >gi|37731269|gb|AAO74953.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEGLPGQ 215 >gi|189485091|ref|YP_001956032.1| 30S ribosomal protein S3 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226697772|sp|B1GZ89|RS3_UNCTG RecName: Full=30S ribosomal protein S3 gi|170287050|dbj|BAG13571.1| 30S ribosomal protein S3 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 231 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 100/227 (44%), Positives = 145/227 (63%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KI+P RLG W S+WF E + ED +IR YL+ LK A V+KI+IER Sbjct: 1 MGHKIHPKSIRLGYIKDWESKWF-NLKEMPNFIEEDYRIRVYLKNRLKLASVSKIVIERP 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K R+ +Y+ARPG++IGK G IE +RK++ MT + +++ E+ +PEI+A L +++I Sbjct: 60 GKYLRVSIYTARPGIVIGKGGQGIESLRKEIETMTAKKTFVNIMEIKRPEIDAQLASENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE+++ FRR MKR ++ AM G G+KV+ SGRL GAE++RTE EGR+PLQT RA Sbjct: 120 AFQLEKQIAFRRVMKRTIEKAMMSGVQGIKVMVSGRLGGAEIARTEWLKEGRIPLQTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDYG + A T G G+KV++ ++ + + VV+ D+ Sbjct: 180 DIDYGFSEACTPMGHIGVKVWIFKKEFFKKTAKELAEDAKVVVDLDT 226 >gi|225010523|ref|ZP_03700994.1| ribosomal protein S3 [Flavobacteria bacterium MS024-3C] gi|225005352|gb|EEG43303.1| ribosomal protein S3 [Flavobacteria bacterium MS024-3C] Length = 238 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDRLAEDDKIRKYVFARLAKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI Sbjct: 60 LKLVTITITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPEVDANLVAASI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +Q+E R+ +RRA+K A+ +AMR A+G+KV+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 CRQIEGRISYRRAIKMAIAAAMRMNAEGIKVLISGRLNGAEMARSEGYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|110227117|ref|YP_665596.1| ribosomal protein S3 [Populus alba] gi|122230950|sp|Q14FB9|RR3_POPAL RecName: Full=30S ribosomal protein S3, chloroplastic gi|109945555|dbj|BAE97243.1| ribosomal protein S3 [Populus alba] Length = 218 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG S WFA+ + L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKNFSEGLQEDQKIRNCIKNYVQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 I I++ ++I+Y P + K I++++ +K N N ++++S+ + P Sbjct: 61 GHIEIQKRIDVIQVIIYLGFPKFLTEGKPKRIKELQINVQKELNCMNRKLNISITRIENP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 YMHPNVLAEFIAGQLKNRVSFRKAMKKAIELTEQSNTKGIQVQIAGRLDGKEIARAEWVR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA I+Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|139389302|ref|YP_001123068.1| ribosomal protein S3 [Aethionema grandiflorum] gi|139390386|ref|YP_001122984.1| ribosomal protein S3 [Aethionema cordifolium] gi|152060526|sp|A4QJF3|RR3_AETCO RecName: Full=30S ribosomal protein S3, chloroplastic gi|152060527|sp|A4QJN7|RR3_AETGR RecName: Full=30S ribosomal protein S3, chloroplastic gi|134286179|dbj|BAF49808.1| ribosomal protein S3 [Aethionema cordifolium] gi|134286264|dbj|BAF49892.1| ribosomal protein S3 [Aethionema grandiflorum] Length = 218 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYCEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISTP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|313184031|ref|YP_004021188.1| ribosomal protein S3 [Castanea mollissima] gi|290487128|gb|ADD29948.1| ribosomal protein S3 [Quercus nigra] gi|309321558|gb|ADO65098.1| ribosomal protein S3 [Castanea mollissima] Length = 221 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 132/220 (60%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPQNYSEGLQEDQKIRDWIKNYVQKNIQISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKG-----TDIEKIRKKLSNMTNSEIHLSVNEVP 107 A I I++ ++I+Y P L++ KG +++ +K N N ++++++ + Sbjct: 61 ACIKIQKRIDLIQVIIYMGFPKLLLEGKGGPRRIEELQIDVQKEINCVNRKLNIALTRIT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E Sbjct: 121 NPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 IREGRVPLQTIRAKIDYCSYAVGTIYGVLGIKIWIFVDEE 220 >gi|145982742|gb|ABQ01153.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma] Length = 243 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 5/215 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV I +I Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKT-LIKRFII 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 120 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 180 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 214 >gi|295135695|ref|YP_003586371.1| 30S ribosomal protein S3 [Zunongwangia profunda SM-A87] gi|294983710|gb|ADF54175.1| 30S ribosomal protein S3 [Zunongwangia profunda SM-A87] Length = 239 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 147/212 (69%), Gaps = 1/212 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+ S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAHLVGASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIEISGRLNGAEMARSEAYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T YG G+KV++ + D Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIMKGEVYGKRD 211 >gi|254796653|ref|YP_003081489.1| ribosomal protein S3 [Neorickettsia risticii str. Illinois] gi|254589890|gb|ACT69252.1| ribosomal protein S3 [Neorickettsia risticii str. Illinois] Length = 211 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 132/209 (63%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRL + + S W+++ +Y + ED + Y++ G++K++I+R Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTRYVESSFAHIGISKVIIKRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +C I ++ +PGLIIGKKG D+E + KL+ L+V EV KP +A L+A+SI Sbjct: 61 GVSCDITLHCVKPGLIIGKKGADLESFKLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A QLE+R FRR +K+A+ + MR GVKV SGRL+GAE++RTE + EG +PL T+R Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 A IDY A A T YG G+KV++ + Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209 >gi|189162310|ref|YP_001936556.1| ribosomal protein S3 [Fagopyrum esculentum subsp. ancestrale] gi|166065396|gb|ABY79771.1| ribosomal protein S3 [Fagopyrum esculentum subsp. ancestrale] Length = 218 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + + S WFA+ Y LHED KIR+ ++ + +Q G+ Sbjct: 1 MGQKINPLGFRLGTSQSHYSIWFAQPKNYSEGLHEDQKIRDCIKNYAQQNVRASSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPRGIEELQMNVQKKLNSVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YRHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIHAKIDYCAYTVRTIYGVLGIKIWIFIDEE 218 >gi|37730860|gb|AAO74902.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731196|gb|AAO74905.1| ribosomal protein S3 [Aster yellows phytoplasma] gi|37731200|gb|AAO74908.1| ribosomal protein S3 [Aster yellows phytoplasma] Length = 252 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ W S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRIWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215 >gi|225542949|emb|CAX63059.1| rps3 protein [Himachal periwinkle phytoplasma] Length = 252 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKTGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T Y GIKV++ + + Sbjct: 181 TLRADIDYAAVEAHTTYEVLGIKVWIFHGEVLPGQ 215 >gi|108804968|ref|YP_644905.1| 30S ribosomal protein S3P [Rubrobacter xylanophilus DSM 9941] gi|122975885|sp|Q1AU35|RS3_RUBXD RecName: Full=30S ribosomal protein S3 gi|108766211|gb|ABG05093.1| SSU ribosomal protein S3P [Rubrobacter xylanophilus DSM 9941] Length = 218 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 145/212 (68%), Gaps = 8/212 (3%) Query: 1 MGQKINPILFRLGVNC-----TWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKI 55 MGQK++P FRLGV + S+W++ ++ LL EDLKIRE+++ L +AG+A+I Sbjct: 1 MGQKVHPEGFRLGVRRKGEKVDFKSQWYSD-RDFAELLGEDLKIREHIERKLARAGIAEI 59 Query: 56 LIERTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113 I++ + + +++ARPG++IGK G++++ +R+ L +T+ ++ ++V EV +PE+NA Sbjct: 60 EIKKAAEQGEVVVDIHTARPGIVIGKGGSEVDALRRDLERLTSKKVQVNVREVSRPELNA 119 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 L+A+SIA+QLE R FRR MKRA+ SAMR GA G ++ SGRL G E+SR+E EG+V Sbjct: 120 KLVAESIAEQLEGRAAFRRTMKRALTSAMRSGAVGARIQCSGRLGGIEMSRSETVSEGKV 179 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 PL TL A IDYG A T G G+KV+++ Sbjct: 180 PLHTLDADIDYGFKEANTQMGQIGVKVWINHG 211 >gi|290487096|gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333] Length = 218 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSVWFAQPKKYSEGLEEDQKIRDCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + +E+++ +K + N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYIGFPKLLIEGRPRGVEELQINVQKKFHSVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|91984030|ref|YP_567116.1| ribosomal protein S3 [Vitis vinifera] gi|122224043|sp|Q0ZIY0|RR3_VITVI RecName: Full=30S ribosomal protein S3, chloroplastic gi|91701688|gb|ABE47572.1| ribosomal protein S3 [Vitis vinifera] gi|147825330|emb|CAN62276.1| hypothetical protein VITISV_011840 [Vitis vinifera] Length = 218 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSKGLQEDQKIRDCIKNYVQKNIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L++ K IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLVEGKPRRIEELQMNVQKELNYVNRKLNIAITRITKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL RV FR+A+K+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLRNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSYRVRTIYGVLGIKIWIFVDEE 218 >gi|159161288|ref|YP_001542566.1| ribosomal protein S3 [Cuscuta exaltata] gi|172048137|sp|A8W3F9|RR3_CUSEX RecName: Full=Plastid 30S ribosomal protein S3 gi|158938713|gb|ABW83730.1| ribosomal protein S3 [Cuscuta exaltata] Length = 219 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 132/215 (61%), Gaps = 11/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR++++ +++ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFSQPKNYSESLQEDKKIRDFIKNYVQNNMIKASGAEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +++++ P L+I + I++++ +K N N ++++++ + KP Sbjct: 61 ARIYIQKRIDLIQVVIFMGFPKLLIETRPQGIKELQRTLQKEFNFGNQKLNITITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAVQLKNRVSFRKAMKKAIELAEQADTKGIQVQIAGRVDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVP QT+RA++DY + T YG G+K+++ L Sbjct: 181 EGRVPRQTIRANLDYCSYPVRTIYGVLGVKIWIFL 215 >gi|290487130|gb|ADD29949.1| ribosomal protein S3 [Staphylea colchica] Length = 219 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 131/219 (59%), Gaps = 11/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSHWFAQPKNYSEGLQEDKKIRDCIKNYVKKNKKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIHMGFPKLLIESRPQRIEELQINVQKKLNCVNRKLNIAITRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARVGWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDYCSHTVRTIYGVLGIKIWIFIDEEK 219 >gi|262038271|ref|ZP_06011661.1| ribosomal protein S3 [Leptotrichia goodfellowii F0264] gi|261747738|gb|EEY35187.1| ribosomal protein S3 [Leptotrichia goodfellowii F0264] Length = 218 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 94/214 (43%), Positives = 145/214 (67%), Gaps = 1/214 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+G+ TW+SRWFA G +Y HEDLKI++Y++ + AG++ I IERT Sbjct: 1 MGQKVDPRGMRIGIVKTWDSRWFAEGKDYLNNFHEDLKIKKYIKKNYYHAGISTIQIERT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + II+ + + G++IG+KG +IE ++ L +T ++ + V E+ P +A LIA+S Sbjct: 61 SPTDITIIIETGKAGILIGRKGQEIEALKVNLEKLTGKKVQVKVQEIKNPNKDAQLIAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA +E+RV ++RA+++A+Q A + G G+K++ SGRLNGAE++R+E L GRVPL TLR Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKSGVKGIKIMVSGRLNGAEIARSEWTLSGRVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 A +DY TA A T YG+ G+KV+V + + Sbjct: 181 ADVDYATATAHTTYGALGLKVWVFNGEVLPTKKE 214 >gi|162456240|ref|YP_001618607.1| 30S ribosomal protein S3 [Sorangium cellulosum 'So ce 56'] gi|189045339|sp|A9FGJ7|RS3_SORC5 RecName: Full=30S ribosomal protein S3 gi|161166822|emb|CAN98127.1| 30S ribosomal protein S3 [Sorangium cellulosum 'So ce 56'] Length = 230 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 14/229 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FR+GV TW+S+W+ G+ Y LH+D++I+ ++ +L A +A + IER Sbjct: 1 MGQKTHPYGFRVGVIKTWSSKWYEDGAAYQKWLHQDIRIKRAIKQYLYNANIAGVEIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKL--------------SNMTNSEIHLSVNEV 106 ++IV++ARPG++IGK G IE ++ S+ T++E+ + V EV Sbjct: 61 ANRAKVIVFTARPGMVIGKGGKGIETLKSGNVGTASKGETLFPGVSSFTDNEVFIDVQEV 120 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 K E NA L+A++IA QLERR+ FRRAMK+AV +AM+FGA G++V +GRL G+E+SR E Sbjct: 121 RKAETNAQLVAENIATQLERRIAFRRAMKKAVSTAMKFGAKGIRVRCAGRLGGSEMSRVE 180 Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 Y EGRVPL TLRA I++G A A T G G+KV++ + + I Sbjct: 181 TYREGRVPLHTLRADIEFGLAEARTKVGIIGVKVWMFKGEVLQRKARRI 229 >gi|114330008|ref|YP_740689.1| ribosomal protein S3 [Nandina domestica] gi|122165923|sp|Q09FS2|RR3_NANDO RecName: Full=30S ribosomal protein S3, chloroplastic gi|114054510|gb|ABI49903.1| ribosomal protein S3 [Nandina domestica] Length = 218 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI----REYLQCHLKQA----GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KI R Y+Q +++ + G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIQDCIRNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRSRGIEELQSSVQKRFNSVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG+ GIK+++ +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFTDEE 218 >gi|167391844|ref|YP_001671721.1| ribosomal protein S3 [Carica papaya] gi|166344171|gb|ABY86821.1| ribosomal protein S3 [Carica papaya] Length = 218 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR++++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDKKIRDFIKNYVKKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I K IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDKPQRIEELQRNVQKELNCVNRKLNIAIIRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A I+Y T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIEAKINYCCYRVRTIYGVLGIKIWIFVDEE 218 >gi|224179456|ref|YP_002600842.1| ribosomal protein S3 [Pycnococcus provasolii] gi|217314499|gb|ACK36841.1| ribosomal protein S3 [Pycnococcus provasolii] Length = 286 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK+NP FRLG + S WFA +Y L EDL +R++L +G++ + Sbjct: 1 MGQKVNPFGFRLGYSQHHRSDWFASSQDYSKKLQEDLLVRKFLTREFPDTESGISAVYTR 60 Query: 59 RTHKNCRIIVYSARPGLIIGKK-----------GTDIEKIRKKLSNMTNSEIHLSVNEVP 107 R + + +++ARP +++G G + + + L + E Sbjct: 61 RKGQLLSLEIHTARPRVLLGSNQETQDPTNRVSGLVQVRRDLEKLFPQKIPLSLRLVEET 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTE 166 +P+ N L+A S+A QLE+RV FRRA+K+ ++ A G GVKV SGRLNGAE++R+E Sbjct: 121 QPDSNVALLAASLAHQLEKRVAFRRALKQTIKRAQTARGVLGVKVQISGRLNGAEIARSE 180 Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 EGRVPL TLRA +DY T A T YG GIKV++ + + R +++ Sbjct: 181 WVREGRVPLHTLRAEVDYATHTARTLYGCLGIKVWLYKESQGLYQKQKTGMGQQRALDES 240 Query: 227 S 227 + Sbjct: 241 N 241 >gi|327399517|ref|YP_004340386.1| 30S ribosomal protein S3 [Hippea maritima DSM 10411] gi|327182146|gb|AEA34327.1| ribosomal protein S3 [Hippea maritima DSM 10411] Length = 209 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 94/205 (45%), Positives = 140/205 (68%), Gaps = 1/205 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ TW SRW+A ++ ED KI++ ++ + AG++KI IER Sbjct: 1 MGQKVNPIGLRLGITKTWTSRWYAE-RDFKDKFLEDQKIKKAIKSKVYYAGISKIEIERK 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +Y+A PG+IIG+KG ++EK+++ + +T+S + ++V +V PE +A L+A++I Sbjct: 60 RNKMTVNIYAAMPGIIIGRKGAEVEKLKEYIKTLTDSNVTINVRDVSVPEKDAQLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A Q+E+R+ +RR MKRA A++ GA G+K+ SG+L GAE++RTE EGRVPL TLRA Sbjct: 120 ALQIEKRMPYRRVMKRAAYLALKKGAKGIKIQISGKLGGAEMARTEWIKEGRVPLSTLRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 IDYG A + T G GIKV+V Sbjct: 180 DIDYGFAESLTQAGVIGIKVWVFNG 204 >gi|325287054|ref|YP_004262844.1| 30S ribosomal protein S3 [Cellulophaga lytica DSM 7489] gi|324322508|gb|ADY29973.1| ribosomal protein S3 [Cellulophaga lytica DSM 7489] Length = 238 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHARLAKASVSRVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A S+ Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITSKEVQINIFEIKRPEVDANLVAASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSEAYKDGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALNEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|91208939|ref|YP_538974.1| ribosomal protein S3 [Gossypium hirsutum] gi|119368537|ref|YP_913225.1| ribosomal protein S3 [Gossypium barbadense] gi|91207768|sp|Q2L946|RR3_GOSHI RecName: Full=30S ribosomal protein S3, chloroplastic gi|125987746|sp|A0ZZ73|RR3_GOSBA RecName: Full=30S ribosomal protein S3, chloroplastic gi|85687453|gb|ABC73665.1| ribosomal protein S3 [Gossypium hirsutum] gi|119224899|dbj|BAF41285.1| Ribosomal protein S3 [Gossypium barbadense] Length = 218 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A I+Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218 >gi|149179420|ref|ZP_01857974.1| 30S ribosomal protein S3 [Planctomyces maris DSM 8797] gi|148841731|gb|EDL56140.1| 30S ribosomal protein S3 [Planctomyces maris DSM 8797] Length = 233 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 91/206 (44%), Positives = 135/206 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P FR+GV W SRW+A ++GALL ED K+R+++Q K AG+ K+ IERT Sbjct: 1 MGQKVRPTGFRVGVVEDWRSRWYASKKDFGALLVEDQKVRKFIQTKYKFAGIPKVEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ARPG+IIG+KG ++++++ +L ++T + L + EV +A L+A+ I Sbjct: 61 RDQVVVHLFTARPGIIIGRKGQEVDRLKAELEDLTGRRMELKIIEVDNALQSAALVAEDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R FRR +KRA+ M G G+K+ SGRL GAE+SR E G +PL TL+ Sbjct: 121 AQQLSKRGSFRRTIKRALDQVMETGVHGIKIELSGRLGGAEMSRREKASRGSIPLSTLQR 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206 H+DYG A T +G G+KV++ L D Sbjct: 181 HVDYGFREAHTTFGVIGVKVWIDLGD 206 >gi|194132137|gb|ACF33391.1| ribosomal protein S3 [Gonystylus bancanus] Length = 218 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED K+R+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSDGLQEDKKMRDCIKNYVQKNMRVSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + I + +K N N ++++ V + P Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRPGRIEGLQMNVQKELNCVNRKLNIVVTRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A IDY + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIGAKIDYSSYTVGTIYGVLGIKIWIFIDKE 218 >gi|13518476|ref|NP_084835.1| ribosomal protein S3 [Lotus japonicus] gi|27734485|sp|Q9BBP8|RR3_LOTJA RecName: Full=30S ribosomal protein S3, chloroplastic gi|13359017|dbj|BAB33234.1| ribosomal protein S3 [Lotus japonicus] Length = 218 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENLKEDKKIRDCIKTYIQKTIKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I K IE+++ +K N N ++++++ + Sbjct: 61 GRIKIQKRIDLIQVIIYMGFPKLLIDGKPRRIEELQINVQKKMNYVNRKLNIAITRIANA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E Sbjct: 121 YRDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIKV++ L E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKVWIFLNKE 218 >gi|149390480|ref|YP_001294309.1| ribosomal protein S3 [Illicium oligandrum] gi|172048710|sp|A6MMY3|RR3_ILLOL RecName: Full=30S ribosomal protein S3, chloroplastic gi|147917433|gb|ABQ52557.1| ribosomal protein S3 [Illicium oligandrum] Length = 218 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + + WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHCLWFAQPKNYSGGLQEDEKIRDCIKNYVQKHMRVSSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P +I + IE+++ +K N N +++++ V KP Sbjct: 61 ARIGIQKKIDLIQVIIHIGFPHFLIEGRARGIEELQINVQKKLNSVNRRLNIAITRVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 T++A+ IA QL+ RV FR+AMK+A++ + G++V SGR+NG E++R E Sbjct: 121 YGQPTILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRINGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRAKIDHCSYAVRTIYGVLGIKIWIFLDEE 218 >gi|110004235|emb|CAK98573.1| 30s ribosomal protein s3 [Spiroplasma citri] Length = 252 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 95/234 (40%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV TW+SRW+A EY LH+D+KIR+ L LK A V+KI IERT Sbjct: 1 MGQKVSPTGLRVGVIKTWDSRWYAEKQEYVKWLHQDIKIRKALMKELKGASVSKIEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIA 117 K I + +AR G+++G++G +I K+ K + E+ ++V E+ P+ +A L+A Sbjct: 61 KKEIVIFIRTARVGVVLGQEGKNIAKLVKLVHITIGDRKMEVKINVVEIKNPDTDAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 +IA+Q+ R FR K A++ AM+ GA G+K SGRL G +++RTE Y +G VPL T Sbjct: 121 NTIAEQIVNRASFRSVQKLAIKKAMKAGAQGIKTSVSGRLGGVDMARTEGYTKGTVPLAT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKDS 227 LR+ IDY A A T YG G+KV++ + E+ + P E R + + Sbjct: 181 LRSDIDYALAEALTTYGQIGVKVWICKGEILSKELVSTSDEKPKFEKRDFNRSN 234 >gi|189501205|ref|YP_001960675.1| 30S ribosomal protein S3 [Chlorobium phaeobacteroides BS1] gi|226697680|sp|B3EP55|RS3_CHLPB RecName: Full=30S ribosomal protein S3 gi|189496646|gb|ACE05194.1| ribosomal protein S3 [Chlorobium phaeobacteroides BS1] Length = 252 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 98/226 (43%), Positives = 150/226 (66%), Gaps = 2/226 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MGQK++P FRLG+ W SRW+ G + +D IR Y+ LK+ AGVA+I+IE Sbjct: 1 MGQKVHPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYVNTRLKKERAGVARIVIE 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT K+ +I +++ARPG ++G+KG +I + ++L+ +T E+ + V EV KPE+ A LI + Sbjct: 61 RTTKHIKINIFAARPGAVVGRKGEEINNLSQELNRITGKEVKIDVVEVVKPEVEAQLIGE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL T+ Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTI 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 RA++DY + A T G+ GIKV+V + + + E + + Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVLVQRIDAVEEEEMKKIR 226 >gi|325210966|ref|YP_004286042.1| ribosomal protein S3 [Gossypium thurberi] gi|290775828|gb|ADD62324.1| ribosomal protein S3 [Gossypium thurberi] Length = 218 Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNMRLSSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+ A I+Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218 >gi|134093239|ref|YP_001109540.1| ribosomal protein S3 [Populus trichocarpa] gi|152060541|sp|A4GYU9|RR3_POPTR RecName: Full=30S ribosomal protein S3, chloroplastic gi|133712101|gb|ABO36744.1| ribosomal protein S3 [Populus trichocarpa] Length = 218 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG S WFA+ + L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKNFFEGLQEDQKIRNCIKNYVQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 I I++ ++I+Y P + K I++++ +K N N ++++S+ + P Sbjct: 61 GHIEIQKRIDVIQVIIYLGFPKFLTEGKPKRIKELQINVQKELNCMNRKLNISITRIENP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 YMHPNVLAEFIAGQLKNRVSFRKAMKKAIELTEQSNTKGIQVQIAGRLDGKEIARAEWVR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA I+Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|68164842|ref|YP_247638.1| ribosomal protein S3 [Cucumis sativus] gi|75317315|sp|Q4VZN0|RR3_CUCSA RecName: Full=30S ribosomal protein S3, chloroplastic gi|67511437|emb|CAJ00797.1| ribosomal protein S3 [Cucumis sativus] gi|74027138|gb|AAZ94688.1| ribosomal protein S3 [Cucumis sativus] gi|115432842|gb|ABI97455.1| ribosomal protein S3 [Cucumis sativus] gi|115498342|gb|ABI98784.1| ribosomal protein S3 [Cucumis sativus] Length = 218 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA +Y L ED KIR+ +Q ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIQNYVQKNMRIFSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY T YG GIK+++ + ++ Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGILGIKIWIFVDEQ 218 >gi|194246739|ref|YP_002004378.1| 30S ribosomal protein S3 [Candidatus Phytoplasma mali] gi|254764540|sp|B3QZZ7|RS3_PHYMT RecName: Full=30S ribosomal protein S3 gi|126680556|gb|ABO26496.1| ribosomal protein S3 [Candidatus Phytoplasma mali] gi|126680559|gb|ABO26498.1| ribosomal protein S3 [Candidatus Phytoplasma mali] gi|126680562|gb|ABO26500.1| ribosomal protein S3 [Candidatus Phytoplasma mali] gi|193807096|emb|CAP18534.1| 30S ribosomal protein S3 [Candidatus Phytoplasma mali] Length = 245 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 131/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W+S+WFA + +HED IR ++ + +A +A+I IER+ Sbjct: 1 MGQKSNPNGLRLGIIKNWDSKWFANFKKTPQFIHEDFCIRNFINKNYSKALIAQIEIERS 60 Query: 61 HKNCRI----IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K + ++ A+ +I GK ++KI K++ +T E+ +V E+ P+ A L+ Sbjct: 61 KKKDKEIIKINLHVAKSNIINGKDNESLKKITKQIEQITKKEVFFNVIEIKNPDKVAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+E YLEGRVPL Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQKVLKTGVKGVKTLISGRLGGLEMARSEGYLEGRVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA ++Y A T YGS G+KV++ D + Sbjct: 181 TLRADVEYAFTEAHTTYGSFGVKVWIFHGDVLPGE 215 >gi|108802679|ref|YP_636337.1| ribosomal protein S3 [Eucalyptus globulus subsp. globulus] gi|309322484|ref|YP_003933998.1| ribosomal protein S3 [Eucalyptus grandis] gi|91207767|sp|Q49KW0|RR3_EUCGG RecName: Full=30S ribosomal protein S3, chloroplastic gi|60460845|gb|AAX21065.1| ribosomal protein S3 [Eucalyptus globulus subsp. globulus] gi|308223318|gb|ADO23626.1| ribosomal protein S3 [Eucalyptus grandis] Length = 216 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 127/214 (59%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ +L++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFAQAKNYSDGLQEDQKIRNCIKNYLQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I + ++I+Y P L++ K IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIRKRIDLIQVIIYMGFPKLLLEGKTRRIEELQMNVQKELNCVNRKLNIAITRITNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+A+K+A++ + G++V +GRL+G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRLDGKEIARVEWMR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+RA IDY + T YG GIK+++ Sbjct: 181 EGRVPLQTIRAKIDYCSYGVRTVYGVLGIKIWIF 214 >gi|124494195|gb|ABN13145.1| ribosomal protein S3 [Vaccinium witches'-broom phytoplasma] Length = 278 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI RLG+ W+S+W+A + L+ ED IR + H +A +++I I+R Sbjct: 1 MGQKSSPIGLRLGIIRNWDSKWYAEDKQVPNLILEDYXIRNLINNHYSKATISRIEIQRF 60 Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K + I +Y+++ G+++G + + K+ +K+ + +I L+V EV P+ ATL+ Sbjct: 61 KKTNKEQIQIFLYTSKLGIVVGPENKEKNKLVEKIEKLIKKDIILNVLEVKNPDKVATLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A QLE+R FR A K Q ++ G GVK+I SGRL GAE++R E +G VPL Sbjct: 121 AQNLAIQLEQRAFFRAAQKMTAQKVLKTGVKGVKIIISGRLGGAEIARQETLSKGLVPLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV++ + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVWIYHGEVLPKQ 215 >gi|149390578|ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla] gi|172048683|sp|A6MM75|RR3_BUXMI RecName: Full=30S ribosomal protein S3, chloroplastic gi|146762323|gb|ABQ45287.1| ribosomal protein S3 [Buxus microphylla] Length = 218 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNYVQKNMRISSGAEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + +E+++ +K N N ++++++ + KP Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGVEELQINVQKEFNSVNRKLNIAITRIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA I Y + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIYYCSYTVRTIYGVLGIKIWIFVDEE 218 >gi|114329693|ref|YP_740514.1| ribosomal protein S3 [Citrus sinensis] gi|122166145|sp|Q09MD9|RR3_CITSI RecName: Full=30S ribosomal protein S3, chloroplastic gi|113952659|gb|ABI49057.1| ribosomal protein S3 [Citrus sinensis] Length = 219 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 132/219 (60%), Gaps = 11/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR +++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L++ + IE+++ +K N N +I++++ + P Sbjct: 61 ARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 EGRVPLQT+ A IDY + T YG GIK+++ + ++ Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK 219 >gi|290487114|gb|ADD29941.1| ribosomal protein S3 [Euonymus americanus] Length = 218 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 136/218 (62%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG N + +S WF + + Y L ED KIR +++ +++Q G+ Sbjct: 1 MGQKINPLGFRLGTNQSHHSLWFVQPTNYSEGLQEDQKIRNFIKNYVQQNIKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++++Y P L++ + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDLIQVLIYIGFPKLLLESRTRRIEELQRKLQKELNCMNRKLNIAITRIANP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + T++A+ +A QL+ RV R+AMK+A++ A + G++V +GR+NG E++R E Sbjct: 121 YGHPTILAEFLAGQLKSRVSCRKAMKKAIELAEQANTKGIQVQIAGRINGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + A+T YG GIK+++ +E Sbjct: 181 EGRVPLQTIRAKIDFCSYTAQTLYGVLGIKIWIFGDEE 218 >gi|161784230|ref|YP_001595546.1| ribosomal protein S3 [Lemna minor] gi|88696808|gb|ABD48533.1| ribosomal protein S3 [Lemna minor] Length = 218 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG S WFA+ + L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQNHYSFWFAQPKSFSMGLQEDEKIRDCIKNYVQKNMKTSSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K N N +++++ V KP Sbjct: 61 ARIEIQKRIDLIQVIIHIGFPNLLIEGRRRGIEELQTNVQKELNSANRRLNIAITRVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ + D+ Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDDK 218 >gi|256420665|ref|YP_003121318.1| ribosomal protein S3 [Chitinophaga pinensis DSM 2588] gi|256035573|gb|ACU59117.1| ribosomal protein S3 [Chitinophaga pinensis DSM 2588] Length = 266 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 88/222 (39%), Positives = 148/222 (66%), Gaps = 1/222 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ +Y L ED KIR YL + + G+++I+IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWYGGKKDYATKLIEDNKIRTYLNARINKGGISRIVIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119 I +++++PG+IIGK G ++++I+++L +T+ ++ +++ E+ +PEI+A ++A++ Sbjct: 61 LGKLIITIHTSKPGIIIGKGGGEVDRIKEELKKLTSKEDVQINILEIRRPEIDANIVAET 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+E R+ ++RA+K A+ +A+R GA+G+K+ GRL GAE++R+E +GRVPL T R Sbjct: 121 IAKQIESRINYKRAIKMAIATALRMGAEGIKIKVGGRLGGAEIARSEEMKQGRVPLHTYR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 IDY + A T YG GIKV++ + + + D A + Sbjct: 181 MDIDYASLFALTVYGKIGIKVWICKGEVLGERDLNPNAISAK 222 >gi|148927114|ref|ZP_01810744.1| ribosomal protein S3 [candidate division TM7 genomosp. GTL1] gi|147887433|gb|EDK72877.1| ribosomal protein S3 [candidate division TM7 genomosp. GTL1] Length = 209 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 134/207 (64%), Gaps = 1/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK-QAGVAKILIER 59 MGQK+NP RL VN W SRWFA EY L +D+K+R+ ++ K + + +I IER Sbjct: 1 MGQKVNPTSMRLQVNKDWRSRWFAGKREYATWLAQDIKVRKLIEERFKSRPTINRIEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I +++A+ G++IG+ G + +++ ++ + + I +++ EV +PE+ A L+A++ Sbjct: 61 SANLATITIHTAKAGVVIGRGGAGVSELKNQIEKIVDMPIRINIEEVKRPELAAKLVAEN 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA QLERR+ FRRA+K + + M GA G++V +GRLNGAE+SR E + G VPL TLR Sbjct: 121 IAHQLERRINFRRAVKMSALNTMNAGAKGIRVEVAGRLNGAEMSRREKEIRGSVPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDY A A+T G G+KV++ + Sbjct: 181 ADIDYHLAKAQTPAGIIGVKVWIYKGE 207 >gi|121720652|ref|YP_001001573.1| ribosomal protein S3 [Nuphar advena] gi|122246080|sp|Q4FG72|RR3_NUPAD RecName: Full=30S ribosomal protein S3, chloroplastic gi|69216139|gb|AAZ03897.1| ribosomal protein S3 [Nuphar advena] gi|84682243|gb|ABC60497.1| ribosomal protein S3 [Nuphar advena] Length = 218 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQPKNYSKGLQEDEKIRDCIKNYVQKHMRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ ++I + IE+++ +K + N +++++ VP+P Sbjct: 61 ARIDIKKRIDLIQVIIHIGFANMLIEGRARGIEELQTNVQKSFHSVNRRLNIAIARVPRP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ A + A G++V +GRLNG E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQADAKGIQVQIAGRLNGNEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+R ID+ + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRVKIDHCSYPVRTIYGVLGIKIWIFLDEE 218 >gi|116617146|ref|YP_817521.1| ribosomal protein S3 [Coffea arabica] gi|122153658|sp|A0A374|RR3_COFAR RecName: Full=30S ribosomal protein S3, chloroplastic gi|116242202|gb|ABJ89717.1| ribosomal protein S3 [Coffea arabica] Length = 218 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF + Y L ED +IR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFTQAKNYSEGLQEDQQIRNCIKNYVQKNTKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P ++ + IE+++ +K N N + ++++ ++ KP Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKPLLENQPRGIEELQTNLQKKCNSVNRKFNIAITKIAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEYIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 181 RGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218 >gi|114804302|ref|YP_762299.1| ribosomal protein S3 [Morus indica] gi|122166767|sp|Q09WX9|RR3_MORIN RecName: Full=30S ribosomal protein S3, chloroplastic gi|78100354|gb|ABB20995.1| ribosomal protein S3 [Morus indica] Length = 215 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 131/215 (60%), Gaps = 9/215 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPKNYSEDLQEDQKIRDCIKNYIKKNMKIFSSVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIG-KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111 A I I++ ++I+Y P L+I +K +++ +K N N ++++++ + P Sbjct: 61 ACIEIQKRIDLIQVIIYMGFPKLLIEHQKIEELQMNIQKELNSVNRKLNMAITRIANPYG 120 Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 + ++A+ IA QL+ RV FR+AMK+A++ + G G+++ +GR++G E++R E EG Sbjct: 121 HPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREG 180 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 RVPLQT++A IDY + T YG+ GIK+++ + + Sbjct: 181 RVPLQTIKAKIDYCSYTVRTIYGALGIKIWIFVDE 215 >gi|42520524|ref|NP_966439.1| 30S ribosomal protein S3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225630295|ref|YP_002727086.1| ribosomal protein S3 [Wolbachia sp. wRi] gi|61215629|sp|Q73H92|RS3_WOLPM RecName: Full=30S ribosomal protein S3 gi|42410263|gb|AAS14373.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|225592276|gb|ACN95295.1| ribosomal protein S3 [Wolbachia sp. wRi] Length = 204 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 109/205 (53%), Positives = 148/205 (72%), Gaps = 2/205 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG +NP FRL + TW+S W+A Y LH+DL IR Y+ K AGV+K++IERT Sbjct: 1 MGN-VNPKGFRLKIINTWSSIWYAE-KGYKQGLHQDLSIRSYINESFKHAGVSKVIIERT 58 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++S+RPG+IIGKKG+DIEKI++K++ + + ++V V + EI+A LI+ SI Sbjct: 59 IDLVSVIIHSSRPGVIIGKKGSDIEKIKQKIAEKVKNNVEVNVVGVKRSEIDAVLISNSI 118 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQLE+RV FRRAMK+A+QS +R GA G+KV SGRL GAE++RTE Y EGR+PL TLRA Sbjct: 119 AQQLEKRVSFRRAMKKAIQSCLRMGARGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLRA 178 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +IDY A A+T YG G+KV+V + Sbjct: 179 NIDYAFAEAKTIYGIIGVKVWVYIG 203 >gi|37523490|ref|NP_926867.1| 30S ribosomal protein S3 [Gloeobacter violaceus PCC 7421] gi|61215680|sp|Q7NEF8|RS3_GLOVI RecName: Full=30S ribosomal protein S3 gi|35214494|dbj|BAC91862.1| 30S ribosomal protein S3 [Gloeobacter violaceus PCC 7421] Length = 247 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 95/209 (45%), Positives = 138/209 (66%), Gaps = 1/209 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ SRWFA+ EY ALL ED KIR Y+ L G+A + IER Sbjct: 1 MGQKVHPIGLRLGIIRDHRSRWFAKAGEYPALLAEDHKIRAYIVKKLASGGIADVDIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119 I + +ARPG+++G+ G I++++ L + +I ++V EV + + A LIA+ Sbjct: 61 ADQVEITIRTARPGVVVGRGGAGIDELKANLEKLIGRRQIRINVVEVQRVDAEAALIAEY 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 I QLERRV FRRA+++A+Q A R G G+KV+ +GRLNGAE++R+E EGR+PL TLR Sbjct: 121 IVGQLERRVAFRRAVRQAIQRAQRAGVQGIKVMVAGRLNGAEIARSEWTREGRIPLHTLR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 A IDY +A+T YG+ G+KV++ + + Sbjct: 181 ADIDYAYKIAQTTYGTLGVKVWIFRGEIL 209 >gi|159161200|ref|YP_001542486.1| ribosomal protein S3 [Ceratophyllum demersum] gi|172048127|sp|A8SEE2|RR3_CERDE RecName: Full=30S ribosomal protein S3, chloroplastic gi|148508483|gb|ABQ81490.1| ribosomal protein S3 [Ceratophyllum demersum] gi|227481157|emb|CAP62536.1| ribosomal protein S3 [Ceratophyllum demersum] Length = 218 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 78/217 (35%), Positives = 131/217 (60%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQSHRSFWFAQPKNYSDGLQEDEKIRDCIKNYVQKEMRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K N N +++ + V KP Sbjct: 61 ARIGIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQSNVQKEFNSGNRRLNVVITRVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL++RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIAGQLKKRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA ID+ + + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDHCSYMVRTIYGVLGIKIWIFVDE 217 >gi|242624274|ref|YP_003002192.1| 30S ribosomal protein S3 [Aureoumbra lagunensis] gi|239997382|gb|ACS36904.1| 30S ribosomal protein S3 [Aureoumbra lagunensis] Length = 213 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 137/213 (64%), Gaps = 5/213 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRL S WF S Y LL +D KIRE++ AG+A I IERT Sbjct: 1 MGQKVHPSGFRLNTTQKHKSTWFTSLSNYSKLLEQDFKIREFIVKQYDLAGIADIEIERT 60 Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLI 116 +K I +Y A+PG+IIG+ G+ + + K+L ++I++ V EV +P+ ++ L+ Sbjct: 61 YKLNNIFVKIYVAKPGVIIGESGSGLLDLNKQLKKRLKSVNKINIDVFEVAEPDSHSILL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 AQ IA QL RRV F+RA+++A++ A G+KV SGRLNGAE++R+E EGR+PL Sbjct: 121 AQFIANQLVRRVAFKRAVRKAIERAQALDNIQGIKVQISGRLNGAEIARSEWVKEGRMPL 180 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 QTLRA+IDY TA A+T YG GIKV++ + + Sbjct: 181 QTLRANIDYATASAKTIYGIIGIKVWLFKGESI 213 >gi|221632972|ref|YP_002522195.1| 30S ribosomal protein S3 [Thermomicrobium roseum DSM 5159] gi|254764555|sp|B9KZY1|RS3_THERP RecName: Full=30S ribosomal protein S3 gi|221156704|gb|ACM05831.1| ribosomal protein S3 [Thermomicrobium roseum DSM 5159] Length = 223 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 98/218 (44%), Positives = 147/218 (67%), Gaps = 1/218 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MG+K+NPI FRLG+ W S+WFA +Y LHEDL IRE + L +AG+++I I+R Sbjct: 1 MGRKVNPIGFRLGIVHDWESKWFAEKDRQYREQLHEDLDIRELVHRELPRAGISRIEIQR 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + +++A+PG++IGK+G ++E++R+ L + ++HL++ E+ KPE++A L+A+S Sbjct: 61 AVNRVDVTIHTAKPGVVIGKQGANVERLRQLLESRIGKKVHLNIQEIRKPELDARLVAES 120 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA+Q+ RRV +RRAMK A +AMR GA GVK+ GRL GAE+ R + GRVPL T+R Sbjct: 121 IAEQITRRVSYRRAMKHAAAAAMRAGAKGVKIRVKGRLGGAEMKRMVWEIVGRVPLNTIR 180 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A+IDY A T YG G+KV++ D + ++ I A Sbjct: 181 ANIDYAVVHAPTIYGQIGVKVWIYHGDVLPEARPPIAA 218 >gi|3122826|sp|O31161|RS3_SPICI RecName: Full=30S ribosomal protein S3 gi|2623862|gb|AAC35870.1| ribosomal protein S3 [Spiroplasma citri] Length = 252 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 94/234 (40%), Positives = 141/234 (60%), Gaps = 7/234 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+GV TW+SRW+A EY LH+D+KIR+ L LK A V+KI IERT Sbjct: 1 MGQKVSPTGLRVGVIKTWDSRWYAEKQEYVKWLHQDIKIRKALMKELKGASVSKIEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIA 117 K I + +AR G+++G++G +I K+ K + E+ ++V E+ P+ +A L+A Sbjct: 61 KKEIVIFIRTARVGVVLGQEGKNIAKLVKLVHITIGDRKMEVKINVVEIKNPDTDAQLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 +IA+Q+ R FR K A++ AM+ GA G+K SGRL G +++RTE Y +G VPL T Sbjct: 121 NTIAEQIVNRASFRSVQKLAIKKAMKAGAQGIKTSVSGRLGGVDMARTEGYTKGTVPLAT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKDS 227 LR+ ID+ A A T YG G+KV++ + E+ + P E R + + Sbjct: 181 LRSDIDFALAEALTTYGQIGVKVWICKGEILSKELVSTSDEKPKFEKRDFNRSN 234 >gi|124302945|ref|YP_001023740.1| ribosomal protein S3 [Angiopteris evecta] gi|152060528|sp|A2T372|RR3_ANGEV RecName: Full=30S ribosomal protein S3, chloroplastic gi|110628343|gb|ABG79639.1| ribosomal protein S3 [Angiopteris evecta] Length = 218 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52 MGQKINP+ FR+GV S WFA+ Y L ED K+R ++ ++++ G+ Sbjct: 1 MGQKINPLGFRVGVTQQHYSYWFAQPKNYSKFLEEDEKVRTCIEKYVQKQIKNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKP 109 A+I IE +I +Y+ P ++ + G I+K+R + N+ + I +++ V +P Sbjct: 61 ARIEIEGKTDLLQIEIYTGFPDSLVEENGLGIDKLRTNIENLLKKKSQKIQITLKNVLQP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR +K+A++ A + G+K+ +GRLNG E++R E Sbjct: 121 YGEPRILAEHIALQLENRVAFRRTVKKAIELAKKTDIKGIKIQIAGRLNGNEIARVEWVR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RAHI+Y A+T YG GIK++V +E Sbjct: 181 EGRVPLQTIRAHINYCYYPAQTIYGVLGIKIWVFRDEE 218 >gi|326200318|gb|ADZ52357.1| ribosomal protein S3 [Asclepias syriaca] Length = 218 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQVHHSLWFAQPKNYLEGLQEDQKIRDCIKNYVQKNMKNNSGLDGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I++ P L++ + +E+++ +K N N ++++++ +PKP Sbjct: 61 TRIEIQKRIDLIQVIIFMGFPKLLLESRPRGVEELQTTLQKEFNCMNRKLNIAIKRIPKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA+QL+ RV FR+AMK+A++ + G+KV +GR++G E++R E Sbjct: 121 YGNPKILAEFIARQLKNRVSFRKAMKKAIELTGQADTKGIKVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T +G GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWIFIDKE 218 >gi|290487088|gb|ADD29928.1| ribosomal protein S3 [Dillenia indica] Length = 218 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 125/216 (57%), Gaps = 11/216 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF + Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFTQPKNYSEDLQEDQKIRNCIKNYVQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A I I++ +II+Y P L+I + IE+ +K N N +++++V + KP Sbjct: 61 AHIEIKKKIDLIQIIIYMGFPKLLIEGRPRGIEELEMNVQKELNCINKKLNIAVARITKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTKQADIKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 EGRVPLQT+RA IDY T YG GIK+++ + Sbjct: 181 EGRVPLQTIRAKIDYCPYTVRTIYGVLGIKIWIFVG 216 >gi|50346822|ref|YP_053193.1| ribosomal protein S3 [Nymphaea alba] gi|68052952|sp|Q6EW13|RR3_NYMAL RecName: Full=30S ribosomal protein S3, chloroplastic gi|50250367|emb|CAF28633.1| ribosomal protein S3 [Nymphaea alba] Length = 218 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQPKNYSKGLQEDEKIRDCIKNYVQKHMRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ +++ + IE+++ +K + N +++++ V +P Sbjct: 61 ARIDIKKRIDLIQVIIHIGFANMLMEGRARGIEELQTNVQKSFHSVNRRLNIAIARVARP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ A + A G++V +GRLNG E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQADAKGIQVQIAGRLNGNEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+R ID+ + T YG GIK+++ L +E Sbjct: 181 EGRVPLQTIRVKIDHCSYPVRTIYGVLGIKIWIFLDEE 218 >gi|325108621|ref|YP_004269689.1| 30S ribosomal protein S3P [Planctomyces brasiliensis DSM 5305] gi|324968889|gb|ADY59667.1| SSU ribosomal protein S3P [Planctomyces brasiliensis DSM 5305] Length = 233 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 99/230 (43%), Positives = 146/230 (63%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK P FR+G+ W SRW+A E+G LL ED+KIR +++ AG+AK+ IERT Sbjct: 1 MGQKTRPTGFRVGIVEDWRSRWYAPKREFGTLLVEDVKIRNFIKKKYGFAGIAKVEIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + + ++S+RPG+IIG+KG +I++++ +L MT + + + E+ P +A L+A+ I Sbjct: 61 RDHVNVNLHSSRPGVIIGRKGQEIDRLKAELEEMTGRRMEIKIVEMNNPFRSAILVAEDI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 AQQL +R FRRA+KR+++ M GA GVK+ SGRL GAE+SR E G +PL TL+ Sbjct: 121 AQQLGKRGSFRRALKRSMEQVMDAGAHGVKIELSGRLGGAEMSRKEKGSRGSIPLSTLQR 180 Query: 181 HIDYGTAVAETAYGSCGIKVYV---SLRDEVSDSDSTIPAAEHRVVEKDS 227 H+DYG A TA G GIKV++ + DE S+ + A++ K S Sbjct: 181 HVDYGYTTARTAQGIIGIKVWIDLGNYSDEESNDGADAQASKASKKPKRS 230 >gi|290487110|gb|ADD29939.1| ribosomal protein S3 [Bulnesia arborea] Length = 215 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ + +S WFA+ Y L ED KIR+ +Q ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQSHHSIWFAQPKNYSEGLQEDKKIRDCIQNYIQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A I I++ +II+Y P L+I + IE+ KK + N +I++++ + P Sbjct: 61 ACIEIQKRIDLIQIIIYMGFPKLLIKGRSQKIEELQTNIKKEIHCVNRKINIAIKRISNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + + G+KV +GRL+G E++R E Sbjct: 121 YGHPKILAEFIAGQLKNRVSFRKAMKKAIELSEQTDTKGIKVQIAGRLDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+RA IDY + T YG GIK+++ Sbjct: 181 EGRVPLQTIRAPIDYCSYTVRTIYGVLGIKIWIF 214 >gi|228470719|ref|ZP_04055570.1| ribosomal protein S3 [Porphyromonas uenonis 60-3] gi|228307576|gb|EEK16572.1| ribosomal protein S3 [Porphyromonas uenonis 60-3] Length = 249 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 99/223 (44%), Positives = 140/223 (62%), Gaps = 2/223 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG W+S WF G YG L ED +IR+YL L A V++I+IER Sbjct: 1 MGQKINPIANRLGYIRGWDSNWF-GGRNYGDTLVEDDRIRKYLHTRLSGALVSRIIIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K I + +ARPG+I+GK G ++E ++ +L +T I +++ EV KPE++A ++A Sbjct: 60 LKVVTITICTARPGMIVGKGGQNVENLKAELKKVTKADNIQINIYEVRKPEVDAVIVAND 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA++LE R+ +RR +K A+ +AMR GA+G+K+ SGRLN AE++R E Y EGR PL TLR Sbjct: 120 IARKLEGRMSYRRTVKMAIANAMRAGAEGIKIQLSGRLNNAEMARAELYKEGRTPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 A IDY A T G G+KV++ + D ++ R Sbjct: 180 ADIDYAQTGALTKVGMIGVKVWIMNGEVYERRDLAPDLSQPRR 222 >gi|326909430|ref|YP_004327700.1| ribosomal protein S3 [Hevea brasiliensis] gi|308523544|gb|ADO33594.1| ribosomal protein S3 [Hevea brasiliensis] Length = 218 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 128/215 (59%), Gaps = 11/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNCIKNYVKKNAKISSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y L+I + IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIQKRIDVIQVIIYMGFQKLLIESRPKRIEELQMNVQKELNCVNRKLNITITRITNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + T++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 YGHPTILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRLDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVPLQT+ A IDY + T YG GIK+++ Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFP 215 >gi|126680565|gb|ABO26502.1| ribosomal protein S3 [Candidatus Phytoplasma prunorum] Length = 245 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W+S+WFA + +HED IR + + ++ ++KI IER+ Sbjct: 1 MGQKSNPNGLRLGIIKDWDSKWFANFKKTPQFIHEDFCIRNLINKNYSKSLISKIEIERS 60 Query: 61 HKNCRI----IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K + ++ + +I GK ++KI K++ +T E+ L+V E+ P+ A L+ Sbjct: 61 KKKDKEIIKINLHVVKINIINGKDNELLKKITKQIEQITKKEVVLNVIEIKNPDKVAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+ YLEGRVPL Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQRVLKTGVKGVKTLISGRLGGLEMARSXGYLEGRVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA ++Y A A T YGS G+KV++ D + Sbjct: 181 TLRADVEYAFAEAHTTYGSFGVKVWIFHGDVLPGE 215 >gi|197294149|ref|YP_002149770.1| ribosomal protein S3 [Cicer arietinum] gi|197089837|gb|ACH41107.1| ribosomal protein S3 [Cicer arietinum] Length = 218 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKI+P+ FRLG + +S WFA+ Y L ED IR+ ++ ++++ G+ Sbjct: 1 MGQKIHPLGFRLGTTQSHDSIWFAQPRNYSENLKEDKIIRDCIKNYIQKTIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L++ K IE+++ KK N N +I++++ +P Sbjct: 61 GRIKIKKRIDLIQVIIYMGLPKLLLEGKPRRIEELQINVKKKLNCVNRKINIAITRIPNA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ R+ FR+A+K+A++ A + G G++V +GR++G E++R E Sbjct: 121 YRDPNILAEFIAGQLKNRISFRKAIKKAIELAEQAGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIKV++ L E Sbjct: 181 EGRVPLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLNKE 218 >gi|219674013|ref|YP_002456497.1| ribosomal protein S3 [Trifolium subterraneum] gi|193788982|gb|ACF20578.1| ribosomal protein S3 [Trifolium subterraneum] Length = 213 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ FRLG +S WFA+ +Y L ED IR+ ++ +L++ I R Sbjct: 1 MGQKIHPLGFRLGTTQNHDSIWFAKPRDYSENLKEDKIIRDCIKNYLQKTSSGVEGIGRI 60 Query: 61 HKNCRII---VYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINAT 114 RI +Y P L I + IE+++ +K N N +I++++ +P + Sbjct: 61 KIKKRIDLIQIYVGLPKLFIEGEPRRIEELQTNVQKKLNCVNRKINIAITRIPNVYRDPN 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 ++A+ IA QL+ R+ FR+A+++A++ A + G GV+V SGR++G E++R E + EGRVP Sbjct: 121 ILAEFIAGQLKNRIPFRKAIQKAIELAEQAGTKGVQVQISGRIDGKEIARVEWFREGRVP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LQT+RA +DY + T YG GIKV++ L Sbjct: 181 LQTIRAKMDYCSYPVRTIYGVLGIKVWIFLN 211 >gi|126662258|ref|ZP_01733257.1| 30S ribosomal protein S3 [Flavobacteria bacterium BAL38] gi|126625637|gb|EAZ96326.1| 30S ribosomal protein S3 [Flavobacteria bacterium BAL38] Length = 253 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 102/227 (44%), Positives = 153/227 (67%), Gaps = 1/227 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G++YG + ED KIR+Y+ L +A V+KI+IERT Sbjct: 10 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKIAEDYKIRKYIHARLSKASVSKIIIERT 68 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PEI+A L+ SI Sbjct: 69 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPEIDAYLVGTSI 128 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +AMR A+G+KV SGRLNGAE++R+E + EGR+PL T RA Sbjct: 129 ARQIESRISYRRAIKMAIAAAMRMNAEGIKVQISGRLNGAEMARSENFKEGRIPLSTFRA 188 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 IDY A A T YG GIKV++ + D + + K S Sbjct: 189 DIDYSLAEAHTTYGRMGIKVWIMKGEVYGKRDLSPLVGMDKQKSKPS 235 >gi|91214179|ref|YP_538803.1| ribosomal protein S3 [Glycine max] gi|91207777|sp|Q2PMP7|RR3_SOYBN RecName: Full=30S ribosomal protein S3, chloroplastic gi|83595780|gb|ABC25161.1| ribosomal protein S3 [Glycine max] Length = 216 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 129/216 (59%), Gaps = 11/216 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + Y + ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENIQEDKKIRDCIKNYIQKNIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I K IE+ +K N N ++++++ +V Sbjct: 61 GQIKIQKRIDLIQVIIYMGFPKLLIEGKSQKIEELQTNMQKKLNCVNRKLNIAIVKVANA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + +IA+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E Sbjct: 121 YKHPNIIAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 EGRVPLQT+RA IDY T YG GIKV++ + Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKVWIFSK 216 >gi|156598335|gb|ABU85428.1| ribosomal protein S3 [Musa acuminata] Length = 218 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 129/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQRHHSFWFAQPKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ + N +++++ V KP Sbjct: 61 ARIGIKKRIDLIQVIIYIGFPNLLIEGQTRGIEELQMNVEKEFHSVNRRLNIAITRVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQTDTKGMQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218 >gi|296126871|ref|YP_003634123.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563] gi|296018687|gb|ADG71924.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563] Length = 245 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 138/243 (56%), Gaps = 17/243 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQK++PI RLG+N TW+S+WF Y LHEDL IR Y+ + + Sbjct: 1 MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYIMNYYYKTLKEEQKKIGG 60 Query: 50 ------AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 ++ I I R I + +AR G++IG KG +E ++ + M +H S+ Sbjct: 61 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKPVHFSI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 E+ E++A L AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++ Sbjct: 121 TEIRDAELDAALAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 RTE Y G VPL TLRA+IDYGTA A T +G GIKV++ + + + A + Sbjct: 181 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVIS 240 Query: 224 EKD 226 K Sbjct: 241 AKG 243 >gi|154249811|ref|YP_001410636.1| ribosomal protein S3 [Fervidobacterium nodosum Rt17-B1] gi|189045006|sp|A7HM46|RS3_FERNB RecName: Full=30S ribosomal protein S3 gi|154153747|gb|ABS60979.1| ribosomal protein S3 [Fervidobacterium nodosum Rt17-B1] Length = 209 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 94/208 (45%), Positives = 145/208 (69%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W+++WF Y L ED IR +++ + QAG+A++ ++R Sbjct: 1 MGQKVHPKGFRLGLTSEWDAQWFNEKK-YSEYLLEDEAIRNFIKKNYNQAGIARVFVQRP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + + +Y+ARPG++IGKKG I ++R+ L N + + + E+ PE A+L+A+S Sbjct: 60 DAERVLVSIYAARPGILIGKKGAGITELRQALEANFNRKFGIDIIELKTPETEASLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IAQ++E+R ++ MKRA+ +A+R GA G+K++ SGRL GAE++RTE YL+GR+PLQTLR Sbjct: 120 IAQKIEKRASYKIVMKRAITAALRRGARGIKIMVSGRLAGAEIARTEWYLKGRLPLQTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 + IDY TA AET YG+ GIKV++ D+ Sbjct: 180 SVIDYSTARAETKYGTIGIKVWIYKGDQ 207 >gi|122894028|ref|YP_001004224.1| ribosomal protein S3 [Ranunculus macranthus] gi|122239703|sp|Q4FG71|RR3_RANMC RecName: Full=30S ribosomal protein S3, chloroplastic gi|69216141|gb|AAZ03898.1| ribosomal protein S3 [Ranunculus macranthus] gi|85540842|gb|ABC70794.1| ribosomal protein S3 [Ranunculus macranthus] Length = 217 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 129/217 (59%), Gaps = 10/217 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KI++ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFAQPKNYSGGLQEDKKIKDCIKNYVQKNRKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKG--TDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 A+I I++ ++I+Y P + G +++ +K N N ++++++ + KP Sbjct: 61 ARIKIKKRIDLIQVIIYMGFPKFLEGNPQGIEELQSNIQKEFNSVNQKLNIAITRIAKPY 120 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E E Sbjct: 121 GQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIRE 180 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GRVPLQT+RA IDY + T YG+ GIK+++ +E Sbjct: 181 GRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFAGEE 217 >gi|156618861|ref|YP_001430142.1| ribosomal protein S3 [Cuscuta reflexa] gi|171769792|sp|A7M9A1|RR3_CUSRE RecName: Full=Plastid 30S ribosomal protein S3 gi|156556046|emb|CAM98429.1| ribosomal protein S3 [Cuscuta reflexa] Length = 216 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 130/214 (60%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WF++ Y L ED KIR+++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFSQPKNYSESLQEDKKIRDFINNYVKKNMRKASGAEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ +++++ P +I + IE+++ +K N N ++++++ + KP Sbjct: 61 ARISIQKRIDLIQVVIFMGFPKFLIETRPQGIEELQRTLQKEFNCGNQKLNITITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV FR+A+K+A++ A + G++V +GR++G E++R E Sbjct: 121 YGNPNILAEFIAVQLKNRVSFRKAIKKAIELAEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVP QT+RA++DY + T YG GIK+++ Sbjct: 181 EGRVPRQTIRANLDYSSYPVRTIYGVLGIKIWIF 214 >gi|269115067|ref|YP_003302830.1| 30S ribosomal protein S3 [Mycoplasma hominis] gi|268322692|emb|CAX37427.1| 30S ribosomal protein S3 [Mycoplasma hominis ATCC 23114] Length = 243 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 79/230 (34%), Positives = 130/230 (56%), Gaps = 4/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ + N+ W+A ++ L ED KI ++ +++ + K+ I+R Sbjct: 1 MGQKVNPNGFRYGITKSHNTTWYADKDKFATYLLEDQKIYDFFDKKVREYLIGKVQIKRD 60 Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNS---EIHLSVNEVPKPEINATLI 116 I +++A+P +G G +++ + +L + +I + V E+ P++NA L+ Sbjct: 61 QAGHTIVYIHTAKPAAFLGTNGENVKALTAQLKKVIAKKQADITIEVIELKNPDLNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A+++A++ GA G+K +GRLNG +++RTE Y EG + L Sbjct: 121 AEGIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVAGRLNGVDMARTEGYTEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 TLR +DY A T YG G+KV+VSL + +S S E + Sbjct: 181 TLRQDVDYAVTTALTTYGILGVKVWVSLGEILSPKTSEAEVKEAPRKRES 230 >gi|289065128|ref|YP_003434014.1| ribosomal protein S3 [Typha latifolia] gi|69216143|gb|AAZ03899.1| ribosomal protein S3 [Typha latifolia] gi|281371811|gb|ADA63738.1| ribosomal protein S3 [Typha latifolia] Length = 218 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y A L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSAGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ + N +++++ V KP Sbjct: 61 ARIGIQKKIDLIQVIIHIGFPNLLIEGQTRGIEELQINVQKEFYSVNRRLNIAITRVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++++ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILSEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + DE Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDDE 218 >gi|156597985|gb|ABU85259.1| ribosomal protein S3 [Cycas micronesica] Length = 218 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 MGQK+NP+ FRLG+ S WFA+ Y L ED KIR + ++ G+ Sbjct: 1 MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKIRNCIVNYIRRHMRSSSNHGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109 A++ I R ++ ++ P L+I +G IE++R + NM N ++++++ +V KP Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGIEQLRTDVRNMLNPVDRKLNIAIVKVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV R +KRA++ A + G+++ +GRL+G E++R E Sbjct: 121 YGEPNILAEFIALQLEDRVSLGRTVKRAIELAEQADIKGIQIQIAGRLDGNEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ A+T YG GIK+++ ++ Sbjct: 181 EGRVPLQTIRAKIDHCYYPAQTIYGVLGIKIWIFGDEK 218 >gi|169142826|ref|YP_001687250.1| ribosomal protein S3 [Aneura mirabilis] gi|153973852|gb|ABS54512.1| ribosomal protein S3 [Aneura mirabilis] Length = 218 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ S WFA +EY L D +IR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQNHRSYWFAEPNEYSGLCEGDERIRNCIKSYVREHIRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 I IER RI +++ P L++ + +++ + + N + LS+ E+PKP Sbjct: 61 THIGIERKTDLIRIEIHTGFPALLVENRNRGMDQLKINVQSTLDPVNKRLGLSLVEIPKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV RR +++A++ A + +G+K+ SGRLNGAE++R E Sbjct: 121 YGEPNILAEYIALQLENRVASRRTVRKAIELAKKGDVEGIKIQISGRLNGAEMARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVP QT+RA I+Y A+T YG GIKV++ +E Sbjct: 181 EGRVPSQTIRARINYCYYAAQTVYGVLGIKVWIFKNEE 218 >gi|313887086|ref|ZP_07820785.1| ribosomal protein S3 [Porphyromonas asaccharolytica PR426713P-I] gi|312923497|gb|EFR34307.1| ribosomal protein S3 [Porphyromonas asaccharolytica PR426713P-I] gi|332176627|gb|AEE12317.1| ribosomal protein S3 [Porphyromonas asaccharolytica DSM 20707] Length = 248 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 3/218 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG W+S W+ G YG L ED +IR+YL L A V++I+IER Sbjct: 1 MGQKINPIANRLGYIRGWDSNWY-GGRNYGDTLVEDDRIRKYLHTRLSGALVSRIIIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119 K I + +ARPG+I+GK G ++E ++ +L +T I +++ EV KPE++A ++A Sbjct: 60 LKVITITICTARPGMIVGKGGQNVENLKAELKKVTKADNIQINIYEVRKPEVDAVIVAND 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA++LE R+ +RR +K A+ +AMR GA+G+K+ SGRLN AE++R+E Y EGR PL TLR Sbjct: 120 IARKLEGRMSYRRTVKMAIANAMRAGAEGIKIQLSGRLNNAEMARSELYKEGRTPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 A IDY A T G G+KV++ EV + P Sbjct: 180 ADIDYAQTGALTKVGMIGVKVWIM-NGEVYERRDLAPD 216 >gi|260424860|ref|ZP_05779019.1| ribosomal protein S3 [Dialister invisus DSM 15470] gi|260403417|gb|EEW96964.1| ribosomal protein S3 [Dialister invisus DSM 15470] Length = 248 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 143/218 (65%), Gaps = 1/218 (0%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+GV W+S+WFA +Y ALL ED KIR++L+ HL AG++KI I+R +I +Y Sbjct: 1 MRVGVINDWDSKWFAE-KDYAALLVEDAKIRQFLKKHLFVAGISKIGIKRVGTRIKIAIY 59 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +A+PG++IG+ GT IE I+K L+ +T+ E+ + + E+ +++A L+ + IA QLERR+ Sbjct: 60 TAKPGMVIGRGGTGIEDIKKALAAVTDKEVDIDILEIKSKDMSAILVGEDIASQLERRIG 119 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRA+K+AV MR GA G+KV SGRL GAE++R+E Y EG +PLQTLRA+IDY A A Sbjct: 120 FRRAVKQAVGRTMRMGAKGIKVTVSGRLGGAEIARSESYREGSIPLQTLRANIDYAVATA 179 Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 T YG+ GIKV++ + ++ + Sbjct: 180 HTTYGAIGIKVWIYKGELAPGQTVDENENIRTSKDRGN 217 >gi|290487116|gb|ADD29942.1| ribosomal protein S3 [Ficus sp. Moore 315] Length = 215 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 130/215 (60%), Gaps = 9/215 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQRKNYSEDLQEDQKIRNCIKNYVQKNMKISSSVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIG-KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111 A I I++ ++I+Y P L+I +K +++ +K N N ++++++ + P Sbjct: 61 ACIEIQKRIDLIQVIIYMGFPKLLIEHQKIEELQLNIQKELNSVNRKLNIAITRIANPYG 120 Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 + ++A+ IA QL+ RV FR+AMK+A++ + G G+++ +GR++G E++R E EG Sbjct: 121 HPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREG 180 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 RVPLQT+RA I+Y + T YG+ GIK+++ + + Sbjct: 181 RVPLQTIRAKINYCSYTVRTIYGALGIKIWIFVDE 215 >gi|108796747|ref|YP_636490.1| ribosomal protein S3 [Zygnema circumcarinatum] gi|91207779|sp|Q32RN6|RR3_ZYGCR RecName: Full=30S ribosomal protein S3, chloroplastic gi|61393731|gb|AAX45873.1| ribosomal protein S3 [Zygnema circumcarinatum] Length = 236 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 21/236 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52 MGQKI+P+ FRLGV +S WFA + Y LL ED +IR +Q ++++ A + Sbjct: 1 MGQKIHPLGFRLGVTQNHHSTWFAPLNNYSELLKEDERIRNCIQQYVRKYVRSSSRSAEI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTD------------IEKIRKKLSNMTNSEIH 100 A++ I++ + +++A P L++ + + + + + N N +++ Sbjct: 61 ARVQIQKKTDLVEVQIHTASPSLLVQTRVPNRSTNTQEIGIEYLRRNIQNTLNPGNRKLN 120 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNG 159 +++++V KP A ++A+ IA QLE RV FR+ MK+A++ A + G G+K+ +GRLNG Sbjct: 121 MTLSQVAKPYGEAIILAEYIALQLESRVAFRKTMKQAIKLANKSGNARGIKIQIAGRLNG 180 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 AE++R E EGRVPL TLRA IDY A+T YG GIKV+V + ++ + Sbjct: 181 AEIARVEWAREGRVPLHTLRAQIDYCHYPAQTIYGVLGIKVWVFQNKSLISNNQQM 236 >gi|254492318|ref|ZP_05105491.1| ribosomal protein S3 [Methylophaga thiooxidans DMS010] gi|224462490|gb|EEF78766.1| ribosomal protein S3 [Methylophaga thiooxydans DMS010] Length = 189 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 100/189 (52%), Positives = 141/189 (74%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91 +L DLK+R+YL+ L A V+KI I+R KN +I +++ARPG++IGKKG DI+K+RK+ Sbjct: 1 MLGNDLKVRDYLKQKLSHASVSKIQIDRPAKNAKITIHTARPGIVIGKKGEDIDKLRKEA 60 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 S + +++ V E+ KPE++ATL+A+S+AQQLERR++FRRAMKRAV + MR GA+G+++ Sbjct: 61 SQLMGIPVNVGVEEIRKPELDATLVAESVAQQLERRIMFRRAMKRAVTNTMRLGAEGIRI 120 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 +GRLNGAE++RTE Y EGRVPL TLRA IDYGTA A+T YG G+KV++ + + Sbjct: 121 NVAGRLNGAEIARTEWYREGRVPLHTLRADIDYGTAEAKTTYGIIGVKVWIFKGEVFDAN 180 Query: 212 DSTIPAAEH 220 P AE Sbjct: 181 AQNAPVAEK 189 >gi|190571552|ref|YP_001975910.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018954|ref|ZP_03334761.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226697775|sp|B3CN32|RS3_WOLPP RecName: Full=30S ribosomal protein S3 gi|190357824|emb|CAQ55280.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995063|gb|EEB55704.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 101/206 (49%), Positives = 146/206 (70%), Gaps = 2/206 (0%) Query: 1 MGQKINPILFRLGVNCT-WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP +FRL +N W+S W A +Y LH+DL IR Y+ K AG++K+ +ER Sbjct: 1 MGQKVNPKVFRLQINSNTWDSVWCATD-DYKQKLHQDLFIRSYINESFKHAGISKVTVER 59 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T +I++S++PG+IIGKKG D+EKI++K++ S + ++V V K EI+A LI++S Sbjct: 60 TVTLVSVIIHSSKPGVIIGKKGLDVEKIKQKIAKKVESSVEVNVVGVKKSEIDAVLISRS 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 I QLE+R+ RRAMK+A+Q+ ++ GA+G+KV SGRL GAE++RTE Y EGR+PL TLR Sbjct: 120 ITHQLEKRISCRRAMKKAIQNCLKMGAEGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205 A+IDY A+T G G+KV+V + Sbjct: 180 ANIDYAFCEAKTICGIIGVKVWVYVG 205 >gi|294155421|ref|YP_003559805.1| 30S ribosomal protein S3 [Mycoplasma crocodyli MP145] gi|291600102|gb|ADE19598.1| 30S ribosomal protein S3 [Mycoplasma crocodyli MP145] Length = 224 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 88/217 (40%), Positives = 140/217 (64%), Gaps = 4/217 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ WFA +++G L ED KI ++ +++Q + K+ I+RT Sbjct: 1 MGQKVNPNGFRFGVTKAHNTTWFADKAQFGNQLVEDAKIYKFFDKYVRQYQLGKVEIKRT 60 Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N + ++SA+P +++G++G +I ++ KL+ ++ I++ V E+ P++NA L+ Sbjct: 61 QDNHTTVTLHSAKPAVVLGQEGKNIVELTTKLTKFIKNKHIKINIKVVELKNPDLNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A+++AMR A G+K SGRLNG +++R+E Y EG + L Sbjct: 121 AEMIAIKLENRESFRTAQKMAIRNAMRARAKGIKTSVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 TLR ++DY TA A T YG+ G+KV+VSL + + D Sbjct: 181 TLRQNVDYATATARTTYGAIGVKVWVSLGEILEGDDK 217 >gi|290487126|gb|ADD29947.1| ribosomal protein S3 [Plumbago auriculata] Length = 218 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 129/217 (59%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR+ + + ++ G+ Sbjct: 1 MGQKINPLGFRLGTSQNHYSIWFAQPKNYFEGLQEDKKIRDCINNYAQKNMKTSSGVKGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A+I I++ R+I+Y P L+I KG IE+ +K N N ++++++ + KP Sbjct: 61 ARIEIKKRIDLIRVIIYIGFPKLLIENKGRGIEELEMNVQKELNSVNQKLNITITRIGKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA+QL+ RV FR+AMK+A++ R G+++ +GR++G E++R E Sbjct: 121 YRHPKILAEFIAEQLKNRVSFRKAMKKAIELTERADTKGIQIQIAGRIDGKEIARIEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDYCAYTVLTIYGVLGIKIWIFIDE 217 >gi|295698643|ref|YP_003603298.1| ribosomal protein S3 [Candidatus Riesia pediculicola USDA] gi|291157086|gb|ADD79531.1| ribosomal protein S3 [Candidatus Riesia pediculicola USDA] Length = 232 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 151/210 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P RLG+ WNS W+A + + L DLK+R +L+ LK+A ++KI IER Sbjct: 1 MGQKSHPNGLRLGIIKNWNSTWYAGKKTFSSQLISDLKVRNFLKKSLKKASISKIFIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +YSARPG+IIGKKG DIEK+RK ++ +T ++++E+ KPE++A L+A+SI Sbjct: 61 SKSIRVTIYSARPGIIIGKKGEDIEKLRKNITKITGVPSQVNISEIRKPELDAKLVAESI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + Q+E+R++FRR +KR++Q+ MR GA G+K+ SGRL G+E++RTE EGR+PL TLRA Sbjct: 121 SSQIEKRIIFRRIIKRSIQNTMRSGAQGIKIEISGRLGGSEIARTEWNREGRIPLHTLRA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 ID+ T+ A+T YG G+KV++ + + Sbjct: 181 DIDFSTSKAKTTYGIIGVKVWIFKGEIFGN 210 >gi|323148943|ref|YP_004222497.1| ribosomal protein S3 [Smilax china] gi|308742634|gb|ADO33485.1| ribosomal protein S3 [Smilax china] Length = 218 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y A + ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHYSFWFAQPKNYSAGIQEDEKIRNCIKNYVQKNKKTPSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I + IE+++ +K + N +++++ V KP Sbjct: 61 ARIEIKKRIDLIQVIIYIGFPNLLIEDRARGIEELQMNVQKKFHSMNRRLNIAITRVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218 >gi|192911944|gb|ACF06580.1| ribosomal protein S3 [Elaeis guineensis] Length = 221 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 127/217 (58%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ + N +++++ + KP Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLIEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDIKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDYCSYTIRTIYGVLGIKIWIFVNE 217 >gi|254237120|ref|ZP_04930443.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719] gi|126169051|gb|EAZ54562.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719] Length = 193 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 97/177 (54%), Positives = 129/177 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ S W+A Y L DLK+REYLQ LK A V++I I R Sbjct: 1 MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+ Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL T Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHT 177 >gi|229577793|ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculifolia] gi|226933921|gb|ACO92054.1| ribosomal protein S3 [Megaleranthis saniculifolia] Length = 218 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WF++ Y L ED KI+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFSQPKSYSEGLQEDQKIQNCIKNYVQKNMKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L+I IE+++ +K N ++++++ V KP Sbjct: 61 ARIKIQKRIDLIQVIIYMGFPKLLIEGSPRGIEELQINVQKELNSVTRKLNIAITRVSKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG+ GIK+++ +E Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFTDEE 218 >gi|69216145|gb|AAZ03900.1| ribosomal protein S3 [Yucca schidigera] Length = 220 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 MGQKINP+ FRLG +S WFA+ + L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNFSVGLQEDEKIRNCIKNYVQKNKRISPGFEGI 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVP 107 G+A+I I++ ++I+Y P L+I + IE+++ + N ++++ + Sbjct: 61 GIARIEIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQMNVQKEFRSVNRRLNIATTRIE 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP + ++A+ +A QL RV FR+AMKRA++ + G+++ +GR++G E++R E Sbjct: 121 KPYGHPNILAEYMASQLRNRVSFRKAMKRAIELTEQTDTKGIQIQIAGRIDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T +G G+K+++ + +E Sbjct: 181 IREGRVPLQTIRAKIDHCSYTIRTIHGVLGLKIWIFVDEE 220 >gi|75755698|ref|YP_319802.1| ribosomal protein S3 [Acorus calamus] gi|161622348|ref|YP_001586220.1| ribosomal protein S3 [Acorus americanus] gi|91207765|sp|Q3V4Z5|RR3_ACOCL RecName: Full=30S ribosomal protein S3, chloroplastic gi|69216135|gb|AAZ03895.1| ribosomal protein S3 [Acorus americanus] gi|74381748|emb|CAI53833.1| ribosomal protein S3 [Acorus calamus] gi|160369891|gb|ABX38782.1| ribosomal protein S3 [Acorus americanus] Length = 218 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIRE ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQSHLSLWFAQPKSYSMGLQEDEKIRECIKNYVQKNPRLSSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I+Y P L I + I++++ +K N N +++++ + KP Sbjct: 61 ARIEIKKRIDLIQVIIYIGFPNLFIEGRTQGIKELQMSVQKRLNSVNQRLNIAIARISKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ +T YG GIK+++ + +E Sbjct: 181 EGRVPLQTIRAKIDHCFHKVQTIYGVLGIKIWIFVDEE 218 >gi|296936710|gb|ADH94382.1| ribosomal protein S3 [Syzygium cumini] Length = 216 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 126/214 (58%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFAQAKNYSDGLQEDQKIRNCIKNYIQKNMRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I + ++I+Y L++ K IE+++ +K N N ++++++ + P Sbjct: 61 ARIEIRKRIDLIQVIIYMGFQKLLLEGKTRRIEELQMNVQKELNCVNRKLNIAITRITNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+RA IDY + T YG GIK+++ Sbjct: 181 EGRVPLQTIRAKIDYCSYGVRTVYGVLGIKIWIC 214 >gi|169794111|ref|YP_001718475.1| ribosomal protein S3 [Manihot esculenta] gi|157695923|gb|ABV66192.1| ribosomal protein S3 [Manihot esculenta] Length = 218 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 125/215 (58%), Gaps = 11/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNCIKNYVKKNAKISSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I + IE+++ +K N N + ++++ +P P Sbjct: 61 VRIEIQKRIDVIQVIIYMGFPKLLIESRPKRIEELQMNVQKELNCVNRKFNIAITRIPNP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++ + IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 YGHPNILGEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRLDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVPLQT+ A IDY + T YG GIK++ Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWTFP 215 >gi|169142898|ref|YP_001687321.1| ribosomal protein S3 [Oenothera glazioviana] gi|159895510|gb|ABX10075.1| ribosomal protein S3 [Oenothera glazioviana] Length = 219 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 77/219 (35%), Positives = 130/219 (59%), Gaps = 13/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++ Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNMQISSDSGVE 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107 G+A+I I +T ++ +Y P L+I ++ ++++I +K N N +I++++ ++ Sbjct: 61 GIARIEIRKTIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY T +G GIK+++ D Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219 >gi|283794903|ref|YP_003359256.1| ribosomal protein S3 [Cryptomonas paramecium] gi|253981875|gb|ACT46792.1| ribosomal protein S3 [Cryptomonas paramecium] Length = 217 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 2/208 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLGV S W A Y + L ED +R+Y AG++ I I R Sbjct: 1 MGQKVHPLGFRLGVVYRHRSSWVADKGNYPSYLKEDFLLRKYFSSRFLDAGISTIEIHRR 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVP--KPEINATLIAQ 118 + +Y++RP ++ I++I++ L N+ ++ V+ + P+++A L+A Sbjct: 61 LTYIDLYLYASRPNALMANSQAAIKEIKEYLRNLGANDACFRVHVLALLHPDLDAYLLAT 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I+QQLE+R+ FR+ M++A++ A + GA G+KV SGRL GAE+SR+E EGRVPLQTL Sbjct: 121 FISQQLEKRISFRKVMQQAIRRARKAGAKGIKVQISGRLGGAEISRSEWKREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206 A I+Y A T YG G+KV++ R+ Sbjct: 181 YADINYAAKEAHTNYGVLGVKVWIFRRE 208 >gi|322380622|ref|ZP_08054774.1| 30S ribosomal protein S3 [Helicobacter suis HS5] gi|321146944|gb|EFX41692.1| 30S ribosomal protein S3 [Helicobacter suis HS5] Length = 221 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 104/199 (52%), Positives = 142/199 (71%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 RLG+N W SRWF A + ED +IR++L+ L AGV++ILIER K R+ V Sbjct: 1 MRLGINRNWTSRWFPSSGVAVANIEEDYRIRKFLKKELYYAGVSEILIERAAKKLRVTVV 60 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 +ARPGLIIGKKG DIEK++ L ++ E+ L++ EV +P+ +A L A+++A QLE+RV Sbjct: 61 AARPGLIIGKKGVDIEKVKTSLKDLIRKEVALNIKEVKRPQADAQLAAENVATQLEKRVA 120 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA IDYG A A Sbjct: 121 FRRAMKKVMQTAMKAGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRAKIDYGFAEA 180 Query: 190 ETAYGSCGIKVYVSLRDEV 208 T YG+ G+KV++ + + Sbjct: 181 FTVYGNIGVKVWLFKGEVL 199 >gi|122233584|sp|Q4FG73|RR3_GINBI RecName: Full=30S ribosomal protein S3, chloroplastic gi|69216137|gb|AAZ03896.1| ribosomal protein S3 [Ginkgo biloba] Length = 218 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 130/218 (59%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQ+INP+ FRLGV S WFA+ Y L ED +IR ++ ++++ G+ Sbjct: 1 MGQRINPLGFRLGVTQNHRSHWFAQKKYYSEDLQEDEEIRNCIENYVRRHMKNYSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 A++ I R ++ ++ P L+I +G IE++R + NM N ++++S+ +V KP Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIEDRGRGIEQLRTDVRNMLNSANRKLNISIAKVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FR+ +K+A++ A + G+++ +GRL+G E++R E Sbjct: 121 YGVPNILAEYIALQLEDRVSFRKTVKKAIELAEQADIRGIQIQIAGRLDGNEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GRVPLQT+RA ID+ A+T YG GIK+++ +E Sbjct: 181 GGRVPLQTIRARIDHCYYPAKTIYGVLGIKIWIFGDEE 218 >gi|150251512|ref|YP_001312245.1| ribosomal protein S3 [Cycas taitungensis] gi|172048630|sp|A6H5M0|RR3_CYCTA RecName: Full=30S ribosomal protein S3, chloroplastic gi|149941562|dbj|BAF64986.1| ribosomal protein S3 [Cycas taitungensis] Length = 218 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI--------REYLQCHLKQAGV 52 MGQK+NP+ FRLG+ S WFA+ Y L ED KI R +++ G+ Sbjct: 1 MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKISNCIVNYIRRHMRSSSNHGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109 A++ I R ++ ++ P L+I +G E++R + NM N ++++++ +V KP Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGSEQLRTDVRNMLNPVDGKLNIAIVKVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV R +KRA++ A + G+++ +GRL+G E++R E Sbjct: 121 YGEPNILAEFIALQLEDRVSLGRTVKRAIELAEQADIKGIQIQIAGRLDGNEIARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ A+T YG GIK+++ ++ Sbjct: 181 EGRVPLQTIRAKIDHCYYPAQTIYGVLGIKIWIFGDEK 218 >gi|217077289|ref|YP_002335007.1| ribosomal protein S3 [Thermosipho africanus TCF52B] gi|226697768|sp|B7IHV2|RS3_THEAB RecName: Full=30S ribosomal protein S3 gi|217037144|gb|ACJ75666.1| ribosomal protein S3 [Thermosipho africanus TCF52B] Length = 209 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 96/207 (46%), Positives = 145/207 (70%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W + WF Y L ED +IR+ ++ QAG+++I+IER Sbjct: 1 MGQKVHPRGFRLGITADWQATWF-NEKNYKEYLLEDEEIRKVIKNKYAQAGISEIVIERP 59 Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 I I+ SARPG+IIGKKG +I ++R++L N ++V E+ PE++A L+A++ Sbjct: 60 DSERVIAIIKSARPGIIIGKKGAEITELRQELEKRFNRRFIVNVEEIKNPEVDAQLVAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++ MK+A+ +AM+ GA G+K++ SGRL GAE++RTE YL+GR+PLQT++ Sbjct: 120 IASRIEKRASYKVVMKKAIFNAMKKGAKGIKIMVSGRLAGAEIARTEWYLKGRLPLQTIK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 + IDYGTA AET YG+ GIKV++ D Sbjct: 180 SIIDYGTARAETKYGTIGIKVWIYKGD 206 >gi|301353378|ref|YP_003795619.1| ribosomal protein S3 [Pteridium aquilinum subsp. aquilinum] gi|301016296|gb|ADK47583.1| ribosomal protein S3 [Pteridium aquilinum subsp. aquilinum] Length = 218 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 128/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIR----EYLQCHLKQA----GV 52 MG+KI+P+ FRLGV+ S WFA+ +Y L ED KIR +Y++ HLK A GV Sbjct: 1 MGRKIHPLGFRLGVSQKHYSHWFAQTKDYPKFLEEDRKIRTSVEKYIEKHLKDASNYGGV 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109 I I+R +I +++ P L+I ++ I +++ + NM ++ + ++ V +P Sbjct: 61 GHIEIQRKTDLVQIDIHTGFPDLLIEERSLGISQMKSDIENMLGLESRKLRVILSSVAQP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ +A QL+ RV FRR MK+A++ R G G+K+ +GRLNG+E++R E Sbjct: 121 YAEPKILAEHVASQLKNRVPFRRTMKKAIELVGRTGDRGIKIQIAGRLNGSEMARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA I Y A+T +G GIK + E Sbjct: 181 EGRVPLQTIRARISYCYHPAQTIHGVLGIKTWTFRGTE 218 >gi|11467009|ref|NP_041916.1| ribosomal protein S3 [Euglena gracilis] gi|133928|sp|P19169|RR3_EUGGR RecName: Full=30S ribosomal protein S3, chloroplastic gi|14370|emb|CAA77920.1| ribosomal protein S3 [Euglena gracilis] gi|336883|gb|AAA84227.1| ribosomal protein [Euglena gracilis] gi|415759|emb|CAA50103.1| 30S ribosomal protein S3 [Euglena gracilis] Length = 218 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 126/217 (58%), Gaps = 13/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P+ FRLG+ + +S W+ Y + + ED+ IR ++ L + ++ I IER Sbjct: 1 MGQKVHPLGFRLGITKSHSSFWYVERRHYASFVKEDIVIRNFMNKELLETLISLIKIERI 60 Query: 60 -----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVP 107 N + ++ ARP +IG+ G + +IR L + N I V V Sbjct: 61 YEFSEQRNNTIVYIHVARPERVIGRDGQGLSRIRDILIDRMNYLLGKTPRIITCKVVGVT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P ++A L+A S+ ++LE+R F RAMK + AM+ GA+G+KV SGRLNG E++RTE Sbjct: 121 SPNLDARLLADSVRRELEKRTPFIRAMKTVMLQAMKAGAEGIKVQVSGRLNGIEIARTEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + EGRVPL TLRA IDY +A T YG GIKV+V Sbjct: 181 FREGRVPLHTLRADIDYFNDIAHTIYGVLGIKVWVYK 217 >gi|49574619|ref|NP_848098.2| ribosomal protein S3 [Adiantum capillus-veneris] gi|57015340|sp|Q85FI4|RR3_ADICA RecName: Full=30S ribosomal protein S3, chloroplastic gi|48476030|gb|AAP29429.2| ribosomal protein S3 [Adiantum capillus-veneris] Length = 217 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 126/215 (58%), Gaps = 11/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MG+KI+P+ FRLGV+ S WFA+ +Y L ED KIR ++ ++++ GV Sbjct: 1 MGRKIHPLGFRLGVSQKHYSYWFAQKKDYPKFLEEDRKIRNLVEKYIQKHVKSVSNYGGV 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109 I I+R +I +Y+ P L+I ++ I ++++ L N+ + +++ V +P Sbjct: 61 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ +A QL+ RV FRR MK+ ++ A R G+K+ +GRLNG+E++R E Sbjct: 121 YGEPKILAEHVASQLKNRVPFRRTMKKTIEMAGRTNGGGIKIQIAGRLNGSEMARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVPLQT+ A+I Y A+T YG GIK++V Sbjct: 181 EGRVPLQTVEANISYCYHPAQTIYGVLGIKIWVFR 215 >gi|1173247|sp|P46172|RS3_BUCAK RecName: Full=30S ribosomal protein S3 gi|710611|dbj|BAA06581.1| ribosomal protein S3 [Acyrthosiphon kondoi endosymbiont] Length = 205 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 98/202 (48%), Positives = 141/202 (69%), Gaps = 3/202 (1%) Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 E+ L D K+R++L L +A V++I+IER K+ R+ +++ARPG++IGKKG D+EK+ Sbjct: 1 EFADNLDSDFKVRQFLAKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 60 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 RK ++++ +++ EV KPE++A L+A SI QLERRV+FRRAMKRAVQ+AMR GA Sbjct: 61 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 120 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+ A T YG G+KV++ + Sbjct: 121 GIKVDVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEI 180 Query: 208 VSDS---DSTIPAAEHRVVEKD 226 + + PAA+ + ++ Sbjct: 181 LGGMAAVEQPEPAAQPKKQQRK 202 >gi|229915545|gb|ACQ90889.1| ribosomal protein S3 [Pedinomonas minor] Length = 233 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 26/232 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P+ RLG+ S W+A +Y L+ ED +R YL K+AG+++I I+R Sbjct: 1 MGQKIHPLGLRLGITQNPRSYWYAPTEQYSYLVVEDSILRNYLNNTYKEAGISRINIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------------------------M 94 + V +ARP + +GK IE +R+ L Sbjct: 61 LNQIYVEVLAARPAIFVGKDTKGIESLRQTLEQKALSYRHDLVQHYGSSFFNEERGTILF 120 Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 N ++ L V E PE +A + + +QLE+RV FRRA+++A+Q A R G+K+ S Sbjct: 121 QNPKVVLQVTERVNPEDDAAFLGDFVVEQLEKRVAFRRAVRQAMQRAQRARVKGIKIQVS 180 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 GRLNGAE++RTE EGRVPLQTLRA+IDY A T YG G+KV+V + Sbjct: 181 GRLNGAEIARTEWVREGRVPLQTLRANIDYSYKTARTIYGLLGVKVWVFKNE 232 >gi|11466742|ref|NP_039338.1| ribosomal protein S3 [Marchantia polymorpha] gi|133934|sp|P06356|RR3_MARPO RecName: Full=30S ribosomal protein S3, chloroplastic gi|11713|emb|CAA28124.1| rps3 [Marchantia polymorpha] Length = 217 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 12/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIR--------EYLQCHLKQAGV 52 MGQKINP+ FRLG+ S WFA Y + ED KIR ++++ G+ Sbjct: 1 MGQKINPLGFRLGITQNHRSYWFANKK-YSKVFEEDKKIRDCIELYVQKHIKNSSNYGGI 59 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 A++ I+R ++ +Y+ P L++ +G IE+++ + N+ + + +++ E+ KP Sbjct: 60 ARVEIKRKTDLIQVEIYTGFPALLVESRGQGIEQLKLNVQNILSSEDRRLRMTLIEIAKP 119 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA +LE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E Sbjct: 120 YGEPKILAKKIALKLESRVAFRRTMKKAIELAKKGNIKGIKIQIAGRLNGAEIARVEWAR 179 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA I+Y A+T YG GIKV++ +E Sbjct: 180 EGRVPLQTIRARINYCYYAAQTIYGVLGIKVWIFQDEE 217 >gi|168702380|ref|ZP_02734657.1| 30S ribosomal protein S3 [Gemmata obscuriglobus UQM 2246] Length = 257 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 101/233 (43%), Positives = 138/233 (59%), Gaps = 15/233 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-------RGSEYGALLHEDLKIREYLQCHLKQAG-- 51 MGQK+ P FR G+ W S W+A G+ + LL ED+ IR ++Q +L Sbjct: 1 MGQKVRPTGFRTGIMRPWRSTWYAPKNSPAADGNSFADLLLEDVAIRAFIQKYLTNKKDR 60 Query: 52 ------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105 +A I IERT + ++V S+R G IIGKKG IEK+ K L +T I + E Sbjct: 61 KEQRPAIADIRIERTRERVTVVVASSRVGAIIGKKGEKIEKLTKALEKLTRRHIEVKTVE 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 V +PEI+A LIA+ IA+QLE+R FRR MK+A+Q AM GA GVK+ SGRL GAE++R Sbjct: 121 VTRPEIDAQLIAEDIAEQLEKRASFRRTMKQAMQRAMEGGAKGVKLQLSGRLGGAEMARC 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 E +EG +PL TLR ++YG A A T G+ GIK +V+ D ++ + A Sbjct: 181 EKGMEGSIPLSTLRVKVEYGFAEAVTPQGNIGIKAWVNQGDYLTGDIADTTEA 233 >gi|50364944|ref|YP_053369.1| 30S ribosomal protein S3 [Mesoplasma florum L1] gi|51704227|sp|P46247|RS3_MESFL RecName: Full=30S ribosomal protein S3 gi|50363500|gb|AAT75485.1| 30S ribosomal protein S3 [Mesoplasma florum L1] Length = 241 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 86/218 (39%), Positives = 134/218 (61%), Gaps = 3/218 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W W+A +Y L +D+KIRE + LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWEDTWYAEKDQYVKWLDQDIKIREGVLKLLKDAAVSKIKIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKI---RKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + N +I+ +ARP +++G++G ++ I +K++ N ++ + V EV P+ +ATL+A Sbjct: 61 NSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKDRNLKVEVKVIEVKNPDADATLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE Y+EG VPL T Sbjct: 121 RWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVSGRLGGVEMARTEGYIEGSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 LRA IDY A T YG G+KV+++ + + + Sbjct: 181 LRADIDYALYEAPTTYGQIGVKVWINHGEVIGGQSQRV 218 >gi|148270428|ref|YP_001244888.1| ribosomal protein S3 [Thermotoga petrophila RKU-1] gi|189045371|sp|A5IM89|RS3_THEP1 RecName: Full=30S ribosomal protein S3 gi|147735972|gb|ABQ47312.1| SSU ribosomal protein S3P [Thermotoga petrophila RKU-1] Length = 209 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNRYYHAGISEIYVERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S Sbjct: 60 DAERINITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+ Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDYGTA A T YG+ GIKV++ D Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206 >gi|71842320|ref|YP_277408.1| ribosomal protein S3 [Emiliania huxleyi] gi|91207766|sp|Q4G359|RR3_EMIHU RecName: Full=30S ribosomal protein S3, chloroplastic gi|60101563|gb|AAX13907.1| ribosomal protein S3 [Emiliania huxleyi] Length = 216 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 87/216 (40%), Positives = 133/216 (61%), Gaps = 8/216 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL----KQAGVAKIL 56 MGQK +P FR+G+N + +S WFA YG +L ED KIR++ + +AGV+K+ Sbjct: 1 MGQKTHPTGFRIGINKSHDSTWFANYGTYGEILKEDYKIRKFFENDWGTLYNKAGVSKVE 60 Query: 57 IERTHKNCRIIVYSARPGLIIG--KKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEIN 112 I+R +++++ARP I G + + +R ++ +TN + + V +V K E Sbjct: 61 IKRKVNQLELLIHAARPKAIAGTADEESTFSTLRAQIKKLTNNPKQTRIKVIQVNKMETE 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 + L+A+++A+QLE+RV F+RA++ Q + G G K+ SGRLNGAE++R E EGR Sbjct: 121 SVLVARALAEQLEKRVAFKRAIRLVAQRLQKSGTKGFKIQVSGRLNGAEMARDEWVREGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 VPLQTLRA I Y TA A T YG GIKV++ ++ + Sbjct: 181 VPLQTLRADISYATARAYTTYGVLGIKVWIFNKEII 216 >gi|293363489|ref|ZP_06610245.1| ribosomal protein S3 [Mycoplasma alligatoris A21JP2] gi|292552838|gb|EFF41592.1| ribosomal protein S3 [Mycoplasma alligatoris A21JP2] Length = 224 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 88/217 (40%), Positives = 138/217 (63%), Gaps = 4/217 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ WFA +++G L ED KI ++ ++Q + K+ I+RT Sbjct: 1 MGQKVNPNGFRYGVTKAHNTTWFADKAQFGNQLVEDAKIYKFFDKLVRQYQIGKVEIKRT 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N + + SA+P L++G++G ++ ++ KL+ ++ +++ V E+ P++NA L+ Sbjct: 61 QNNHVTVTLLSAKPALVLGQEGKNVVELTTKLTKFIKNKNIKLNIKVVELKNPDLNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A+++AMR A GVK SGRLNG +++R+E Y EG + L Sbjct: 121 AEMIAVKLENRESFRTAQKMAIRNAMRSRAKGVKTSVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 TLR ++DY TA A T YG+ G+KV+VSL + + D Sbjct: 181 TLRQNVDYATATARTTYGAIGVKVWVSLGEILEGDDK 217 >gi|225011653|ref|ZP_03702091.1| ribosomal protein S3 [Flavobacteria bacterium MS024-2A] gi|225004156|gb|EEG42128.1| ribosomal protein S3 [Flavobacteria bacterium MS024-2A] Length = 239 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 145/216 (67%), Gaps = 2/216 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI RLG+ W+S W+ G YG + ED KIR+Y+ L +A V+ ++IERT Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGRNYGDKIAEDDKIRKYIHARLSKASVSNVIIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ S+ Sbjct: 60 LKIITITITTARPGIIIGKAGQEVDKLKEELRKITGKEVQINIFEIKRPELDAQLVGASV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A+Q+E R+ +RRA+K A+ +A+R A+G+K+ SGRLNGAE++R E Y EGR+PL T RA Sbjct: 120 ARQIESRISYRRAIKMAIAAAIRMNAEGIKIQISGRLNGAEMARAESYKEGRIPLSTFRA 179 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 IDY A T YG GIKV++ + EV P Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214 >gi|292559546|ref|YP_003540970.1| 30S ribosomal protein S3 [Phoenix dactylifera] gi|290790954|gb|ADD63209.1| 30S ribosomal protein S3 [Phoenix dactylifera] gi|294620616|gb|ADF28185.1| 30S ribosomal protein S3 [Phoenix dactylifera] Length = 221 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 127/217 (58%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L++ + IE+++ + N +++++ + KP Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLMEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA ID+ + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVNE 217 >gi|115604972|ref|YP_784425.1| ribosomal protein S3 [Drimys granadensis] gi|122164402|sp|Q06GV8|RR3_DRIGR RecName: Full=30S ribosomal protein S3, chloroplastic gi|112032700|gb|ABH88335.1| ribosomal protein S3 [Drimys granadensis] Length = 216 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 128/216 (59%), Gaps = 9/216 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54 MG+KINP+ FRLG N + S WFA+ Y L ED KIR+ ++ ++++ G++ Sbjct: 1 MGKKINPLGFRLGANQSHRSLWFAQPKSYSRGLQEDEKIRDCIKNYVQKNMRSGSEGISH 60 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKPEI 111 I I++ ++I+Y P L+I + IE+ +K N +++++ V KP Sbjct: 61 IEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELRINVQKGFRSVNRRLNIAITRVAKPYG 120 Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E EG Sbjct: 121 QPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREG 180 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 RVPLQT+RA ID+ + T YG GIK+++ + ++ Sbjct: 181 RVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 216 >gi|456686|gb|AAA21915.1| ribosomal protein S3 [Mesoplasma florum] Length = 241 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 133/218 (61%), Gaps = 3/218 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W W+A +Y L +D+KIRE + LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWEDTWYAEKDQYVKWLDQDIKIREGVLKLLKDAAVSKIKIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKI---RKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + N +I+ +ARP +++G++G ++ I +K++ N ++ + V EV P+ + TL+A Sbjct: 61 NSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKDRNLKVEVKVIEVKNPDADRTLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE Y+EG VPL T Sbjct: 121 RWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVSGRLGGVEMARTEGYIEGSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 LRA IDY A T YG G+KV+++ + + + Sbjct: 181 LRADIDYALYEAPTTYGQIGVKVWINHGEVIGGQSQRV 218 >gi|170289177|ref|YP_001739415.1| ribosomal protein S3 [Thermotoga sp. RQ2] gi|226697769|sp|B1LBN4|RS3_THESQ RecName: Full=30S ribosomal protein S3 gi|170176680|gb|ACB09732.1| ribosomal protein S3 [Thermotoga sp. RQ2] Length = 209 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNKYYHAGISEIYVERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S Sbjct: 60 DAERINITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+ Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDYGTA A T YG+ GIKV++ D Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206 >gi|290487094|gb|ADD29931.1| ribosomal protein S3 [Lonicera japonica] Length = 226 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 19/226 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNSIKNYIQKNMRIASGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK-----------IRKKLSNMTNSEIHL 101 +I I+++ ++I+Y L+I + +I K +K + N ++++ Sbjct: 61 GRIEIQKSIDLIQVIIYMGFSKLLIKSRMREIVKLKRNLQEELQMNLQKEFHWVNRKLNI 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAE 161 ++ E+ KP N ++A+ IA QL+ RV R+AMK+ ++ + G G++V +GR+NG + Sbjct: 121 AITEIEKPYGNPNILAEFIANQLKNRVSVRKAMKKVIELTEKEGTKGIQVQIAGRINGKD 180 Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 ++R EGRVPLQT+RA IDY + T +G GIK+++ + E Sbjct: 181 IARVVWIREGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWIFIDGE 226 >gi|156598143|gb|ABU85336.1| ribosomal protein S3 [Elaeis oleifera] Length = 217 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 127/217 (58%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ + N +++++ + KP Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLIEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA ID+ + T YG GIK+++ + + Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVNE 217 >gi|108773373|ref|YP_635835.1| ribosomal protein S3 [Oltmannsiellopsis viridis] gi|122244723|sp|Q20F10|RR3_OLTVI RecName: Full=30S ribosomal protein S3, chloroplastic gi|82541955|gb|ABB81996.1| ribosomal protein S3 [Oltmannsiellopsis viridis] Length = 235 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 81/225 (36%), Positives = 123/225 (54%), Gaps = 16/225 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLGV S+WFA+ EY L+ ED +RE L +G+ + I+R Sbjct: 1 MGQKVHPLGFRLGVTQKHRSQWFAKPQEYSQLVLEDHFLREELNKRFPNSGIIDLFIQRK 60 Query: 61 HKNCRII--VYSARPGLIIGKKGTDIEKIRKKLSNMT--------------NSEIHLSVN 104 ++ + + RPGL++G+K + +K+++ + +++ L V Sbjct: 61 VDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVALQVT 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 V A +IA+ + QLERR+ FRRA++R + R G K+ SGRLNGAE++R Sbjct: 121 TVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGAEIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 +E GRVPLQTLRA +DY A+T YG GIKV+ + Sbjct: 181 SEWIRTGRVPLQTLRADVDYCHREAKTIYGILGIKVWTFKGEIKP 225 >gi|150020851|ref|YP_001306205.1| ribosomal protein S3 [Thermosipho melanesiensis BI429] gi|189045343|sp|A6LLL9|RS3_THEM4 RecName: Full=30S ribosomal protein S3 gi|149793372|gb|ABR30820.1| ribosomal protein S3 [Thermosipho melanesiensis BI429] Length = 209 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 99/207 (47%), Positives = 144/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG+ W ++WF Y L ED +IR+ ++ QAG+++I+IER Sbjct: 1 MGQKVHPRGFRLGITTDWQAKWF-NEKNYKEYLLEDEEIRKVIKSKYAQAGISEIVIERP 59 Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + IV +ARPG+IIGKKG +I +RK L N ++V E+ PE++A LIA++ Sbjct: 60 DSERVVAIVKTARPGIIIGKKGAEITALRKDLEEKFNRRFIVNVEEIKTPEVDAQLIAEN 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A ++E+R ++ MKRA+ +AM+ GA G+K++ SGRL GAE++RTE YL+GR+PLQT+R Sbjct: 120 VANRIEKRASYKVVMKRAIFNAMKKGAKGIKIMVSGRLAGAEIARTEWYLKGRLPLQTIR 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 + IDYGTA AET YG+ GIKV+V D Sbjct: 180 SIIDYGTARAETKYGTIGIKVWVYKGD 206 >gi|193216755|ref|YP_001999997.1| 30S ribosomal protein S3 [Mycoplasma arthritidis 158L3-1] gi|226697731|sp|B3PMP1|RS3_MYCA5 RecName: Full=30S ribosomal protein S3 gi|193002078|gb|ACF07293.1| ribosomal protein S3 [Mycoplasma arthritidis 158L3-1] Length = 247 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 11/237 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ NS W+A ++ + L ED KI ++ ++Q + + I+R Sbjct: 1 MGQKVNPNGFRYGITKAHNSVWYADKMQFASHLLEDQKIYDFFDKKVRQLQIGNVQIKRN 60 Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS---EIHLSVNEVPKPEINATLI 116 I VY+A+P +++G G +I+ + K L + + I + V E+ KP++NA L+ Sbjct: 61 QNGLILIYVYTAKPAVMLGTNGENIKNLTKDLQKILKNKKANISIQVIELKKPDLNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A+++A++ GA G+K SGRLNG +++RTE Y EG + L Sbjct: 121 AEDIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVSGRLNGVDMARTEGYNEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP-------AAEHRVVEKD 226 TLR +DY A+T YG G+KV+VSL + +SD A + R V + Sbjct: 181 TLRQDVDYAATTAKTTYGILGVKVWVSLGEILSDEQKAKQEEMDLLNAPKDRRVRRG 237 >gi|164597835|ref|NP_084731.2| ribosomal protein S3 [Oenothera elata subsp. hookeri] gi|169142983|ref|YP_001687405.1| ribosomal protein S3 [Oenothera biennis] gi|172045757|sp|Q9MTI7|RR3_OENEH RecName: Full=30S ribosomal protein S3, chloroplastic gi|159793156|gb|ABW98910.1| ribosomal protein S3 [Oenothera biennis] gi|162423702|emb|CAB67198.2| ribosomal protein S3 [Oenothera elata subsp. hookeri] Length = 219 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 129/219 (58%), Gaps = 13/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++ Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNMQISSDSGVE 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107 G+A+I I + ++ +Y P L+I ++ ++++I +K N N +I++++ ++ Sbjct: 61 GIARIEIRKRIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY T +G GIK+++ D Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219 >gi|213496088|gb|ACJ49192.1| ribosomal protein S3 [uncultured Geobacter sp.] Length = 175 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 96/176 (54%), Positives = 139/176 (78%), Gaps = 1/176 (0%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK+NP+ FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 GQKVNPVGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRAFLKKRLYHSGVSKIEIERAA 59 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++A Sbjct: 60 GKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENVA 119 Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL T Sbjct: 120 LQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHT 175 >gi|169142748|ref|YP_001687175.1| ribosomal protein S3 [Oenothera argillicola] gi|169143069|ref|YP_001687489.1| ribosomal protein S3 [Oenothera parviflora] gi|159792986|gb|ABW98742.1| ribosomal protein S3 [Oenothera argillicola] gi|159895595|gb|ABX10159.1| ribosomal protein S3 [Oenothera parviflora] Length = 219 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 129/219 (58%), Gaps = 13/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++ Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNIQISSDSGVE 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107 G+A+I I + ++ +Y P L+I ++ ++++I +K N N +I++++ ++ Sbjct: 61 GIARIEIRKRIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT+RA IDY T +G GIK+++ D Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219 >gi|71894647|ref|YP_278755.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53] gi|91207820|sp|Q4A5C7|RS3_MYCS5 RecName: Full=30S ribosomal protein S3 gi|71851435|gb|AAZ44044.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53] Length = 226 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 84/225 (37%), Positives = 137/225 (60%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ WFA + YG+ L ED+KI ++ ++ + K+ I+R Sbjct: 1 MGQKVNPNGFRYGVTKAHNTTWFAHKATYGSKLVEDVKIYKFFDKFTRKFQIGKVEIQRD 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLI 116 + + +++++P I+G+ GT+I+ + +K +++L V + +P++NA L+ Sbjct: 61 LNNKVSVFLHTSKPAAILGENGTNIKNLTVALQKHLKNKKLDVNLKVLTIKEPDLNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A++SA++ GA G+K SGRLNG +++RTE Y EG + L Sbjct: 121 AEMIATKLENRESFRSAQKIAIRSALKAGAKGIKTAVSGRLNGVDMARTEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 TLR + Y TA A T YG+ G+KV+VSL + + + A+ + Sbjct: 181 TLRQDVSYATATARTTYGAIGVKVWVSLGEILQGDRTFHHASTKK 225 >gi|308746027|ref|YP_003934597.1| ribosomal protein S3 [Cheilanthes lindheimeri] gi|302375460|gb|ADL29834.1| ribosomal protein S3 [Cheilanthes lindheimeri] Length = 218 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 11/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MG+KI+P+ FRLGVN S WFA+ +Y L D KIR +++ ++++ GV Sbjct: 1 MGRKIHPLGFRLGVNQKHYSYWFAQKKDYPKFLEGDRKIRNFVENYIQKHVKNVSNYGGV 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 I I+R +I +++ P L+I ++ I +++ L N+ N + +++ V +P Sbjct: 61 GHIEIQRKTDLIQIDIHTGFPDLLIEEQSLGISQMKSDLGNILGLGNRNLRVTLTSVTQP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ +A QL R+ FRR MK+ ++ R G+K+ +GRLNG+E++R E Sbjct: 121 YGEPKILAEHVALQLRSRIPFRRTMKKTIELVGRTNGQGIKIQIAGRLNGSEMARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVPLQT++A+I Y A+T +G GIK+++ Sbjct: 181 EGRVPLQTIKANISYCYHPAQTIHGVLGIKIWIFR 215 >gi|108773278|ref|YP_635788.1| ribosomal protein S3 [Chara vulgaris] gi|122231308|sp|Q1ACF9|RR3_CHAVU RecName: Full=30S ribosomal protein S3, chloroplastic gi|77157934|gb|ABA61975.1| ribosomal protein S3 [Chara vulgaris] Length = 219 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 11/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKI+P+ FRLG S WFA+ + Y LL ED +IR + H++ G+ Sbjct: 1 MGQKIHPLGFRLGFIQEHYSHWFAKANSYSELLQEDKEIRSCIYNHIRNHVRNSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 A+I I R ++ +++ P L+I + +E ++ + ++ +++ EV KP Sbjct: 61 ARINIYRRTDLVQLQIHTGFPALLIENRIRGLEHLRRDIQEKIDHKKRKLRMTLVEVLKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 T++A+ IA QLE RV FRR MK+A+Q A G+K+ +GRLNGAE++R E Sbjct: 121 YTEPTILAEYIALQLENRVAFRRVMKKAIQLAKISDIKGIKIQIAGRLNGAEIARNEWIQ 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 +GR+PLQ LRA+I Y A T YG GIKV++ + Sbjct: 181 KGRLPLQMLRANIHYCHYPAHTIYGVLGIKVWIFREKII 219 >gi|159106830|ref|YP_001531250.1| ribosomal protein S3 [Cuscuta obtusiflora] gi|172048146|sp|A8W3M0|RR3_CUSOB RecName: Full=Plastid 30S ribosomal protein S3 gi|158142554|gb|ABW20595.1| ribosomal protein S3 [Cuscuta obtusiflora] Length = 219 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ RLG N S WF++ Y L ED KIR +++ +++ G+ Sbjct: 1 MGQKINPLGLRLGTNQDHYSIWFSQPKAYSKSLQEDQKIRSFIRKYIQNMKISPSGVEGL 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I + + ++ P L++ + +EK++ +K N N +++ + +V KP Sbjct: 61 ARISIYKRIDLIELRIFLGFPKLLLENRPQGLEKLQITLQKELNCGNRRLNIVITKVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV R+AMK+A++ A G++V +GRLNG +++R + Sbjct: 121 YSNPNILAEFIAGQLKNRVSVRQAMKKAIELAEEADTKGIQVQVAGRLNGQDIARVQWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVP QT+RA DY + T YG GIK+++ + + Sbjct: 181 EGRVPRQTIRATFDYCSYPVRTIYGILGIKIWIFVGE 217 >gi|157826057|ref|YP_001493777.1| 30S ribosomal protein S3 [Rickettsia akari str. Hartford] gi|189045324|sp|A8GPE4|RS3_RICAH RecName: Full=30S ribosomal protein S3 gi|157800015|gb|ABV75269.1| 30S ribosomal protein S3 [Rickettsia akari str. Hartford] Length = 217 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA V+++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQVSRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIISINAKKPNIIIGRNGSEIDKLKKAIEKMTFLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++++ G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASLKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|289066805|ref|YP_003434323.1| ribosomal protein S3 [Vigna radiata] gi|27734481|sp|Q8MCA5|RR3_PHAAN RecName: Full=30S ribosomal protein S3, chloroplastic gi|22725681|gb|AAN04888.1| ribosomal protein S3 [Vigna angularis] gi|259019992|gb|ACV90190.1| ribosomal protein S3 [Vigna radiata] Length = 216 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 131/216 (60%), Gaps = 11/216 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ ++Y + ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTKYSENIQEDKKIRDWIKNYIQKNRRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I K IE+++ + N ++++++ +V Sbjct: 61 GEIKIQKRIDLIQVIIYMGFPKLLIEGKPQKIEELQTNMHKKLNCVNRKLNIAIVKVTNA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E Sbjct: 121 YKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 EGRVPLQT+RA I+Y T YG GIKV++ + Sbjct: 181 EGRVPLQTIRAKIEYCCYTVRTIYGVLGIKVWIFSK 216 >gi|215400766|ref|YP_002327527.1| ribosomal protein S3 [Vaucheria litorea] gi|194441216|gb|ACF70944.1| ribosomal protein S3 [Vaucheria litorea] Length = 216 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 8/216 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE-----YLQCHLKQAGVAKI 55 MG K +P+ FRLG+ S W+++ S Y L+ ED IR+ ++ +K GV KI Sbjct: 1 MGHKTHPLGFRLGITQQHKSAWYSKLSNYSTLIKEDFAIRKIIYDYFIYNSIKSTGVTKI 60 Query: 56 LIERTHKNCRII--VYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEIN 112 I R +K +I + +A+PG+I+G+ G ++ + K L N+ N + +++ E+ Sbjct: 61 FITRNNKGDKINLEIQTAKPGVIVGELGKGLDILDKNLCNLLPNKKTLINIIEIKDIFNY 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A L+A + QLE R+ FRRAMKR ++ + G+K+ +GRLNGAE++RTE EG+ Sbjct: 121 ADLLADMLVLQLENRIPFRRAMKRILEYVQKNRIKGIKIQIAGRLNGAEIARTEWLREGQ 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 VPLQTLRA IDY A+T YG GIK+++ + + Sbjct: 181 VPLQTLRADIDYSFKTAQTIYGIIGIKIWIFKGEIL 216 >gi|47459076|ref|YP_015938.1| 30S ribosomal protein S3 [Mycoplasma mobile 163K] gi|61215555|sp|Q6KI49|RS3_MYCMO RecName: Full=30S ribosomal protein S3 gi|47458405|gb|AAT27727.1| 30S ribosomal protein s3 [Mycoplasma mobile 163K] Length = 225 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 131/224 (58%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ W+A ++ +L +D KI + ++ + K+ I R Sbjct: 1 MGQKVNPNGFRYGVTKKHNTLWYADKKDFADILLQDDKIYRFFNKFTREYLIGKVEIRRN 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 ++V+SA+PG I+G+ G +I K+ + + + ++ +++ V + P++NA ++ Sbjct: 61 QNGHLSVLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIIL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA +LE R FR A K A+++AM+ GA G+K SGRLNG +++R+E Y EG + L Sbjct: 121 AEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLR +D+ A A T YG+ G+KV+VS + + + E Sbjct: 181 TLRQDVDFAMATARTTYGAIGVKVWVSKGEFLDGNGEKNVTTEK 224 >gi|32480881|ref|NP_862792.1| ribosomal protein S3 [Calycanthus floridus var. glaucus] gi|68052981|sp|Q7YJU0|RR3_CALFG RecName: Full=30S ribosomal protein S3, chloroplastic gi|32399417|emb|CAD28759.1| ribosomal protein S3 [Calycanthus floridus var. glaucus] Length = 218 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG N + +S WFA+ Y L ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGENQSHHSLWFAQPKSYCRGLQEDEKIRDCIKIYVQKNMRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109 A I I++ ++I+ P +I IE+++ + N +++++ V KP Sbjct: 61 AHIEIQKKMDLIQVIISIGFPNFLIEGGTRGIEELQMNVQKRFHSANRRLNIAITRVAKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA+QL+ RV FR+AMK+ ++ + G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIARQLKNRVSFRKAMKKVIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + ++ Sbjct: 181 EGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 218 >gi|91205871|ref|YP_538226.1| 30S ribosomal protein S3 [Rickettsia bellii RML369-C] gi|157826770|ref|YP_001495834.1| 30S ribosomal protein S3 [Rickettsia bellii OSU 85-389] gi|123266185|sp|Q1RHM7|RS3_RICBR RecName: Full=30S ribosomal protein S3 gi|189045325|sp|A8GVC0|RS3_RICB8 RecName: Full=30S ribosomal protein S3 gi|91069415|gb|ABE05137.1| 30S ribosomal protein S3 [Rickettsia bellii RML369-C] gi|157802074|gb|ABV78797.1| 30S ribosomal protein S3 [Rickettsia bellii OSU 85-389] Length = 217 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 145/210 (69%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S ++A +Y L +DLKIRE + QA V++ILIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVFYAE-KQYKTLFIQDLKIRELVNKSFTQAQVSRILIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIGK G++I+K++K + MT+ SE++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGSEIDKLKKAIEKMTSLSEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIASQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|156618940|ref|YP_001430075.1| ribosomal protein S3 [Cuscuta gronovii] gi|171769776|sp|A7M934|RR3_CUSGR RecName: Full=Plastid 30S ribosomal protein S3 gi|156555978|emb|CAM98362.1| ribosomal protein S3 [Cuscuta gronovii] Length = 219 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 124/217 (57%), Gaps = 11/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ RLG N S WF++ Y L ED KIR +++ ++K G+ Sbjct: 1 MGQKINPLGLRLGTNQDHYSIWFSQPKAYSKSLQEDQKIRSFIRNYIKNMKISPSGVEGL 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I + + + ++ P L++ + +E+++ +K N N +++ + +V KP Sbjct: 61 ARISIYKRIELIEVRIFLGFPKLLLENRPEGLEELQITLQKELNCGNRRLNILITKVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 N ++A+ IA QL+ RV R+AMK+A++ A G++V +GRLNG +++R + Sbjct: 121 YSNPNILAEFIAGQLKNRVSVRQAMKKAIELAEEADTKGIQVQVAGRLNGQDIARVQWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVP QT+RA DY + T YG GIK+++ + + Sbjct: 181 EGRVPRQTIRATFDYCSYPVRTIYGILGIKIWIFVGE 217 >gi|323149191|ref|YP_004222020.1| ribosomal protein S3 [Coccomyxa sp. C-169] gi|317467247|gb|ADV29868.1| ribosomal protein S3 [Coccomyxa sp. C-169] Length = 243 Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 24/229 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+WFA+ +Y L+ ED +R+ + +AG+ + I+R Sbjct: 1 MGQKVHPLGFRLGITQQHRSQWFAKPKQYSFLVVEDHFLRQTISAKFPEAGIVSVGIQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN------------------------MTN 96 RI + +ARP I+ G D++ +R+ LS Sbjct: 61 VDQIRIDICAARPRAIVAFGGQDLDNLRRYLSQSLRGHREDTLGKARAFNPPTPGIAKPM 120 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 +I + + ++ P ++A ++ + +QLE+R+ FRRAMK AVQ A R G+K+ +GR Sbjct: 121 PQIAIYITKLSNPNVSAGFLSDFLVEQLEKRIPFRRAMKSAVQRAQRAQIKGIKIQVAGR 180 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LNGAE++R+E +G+VPLQTLRA++DY A T YG GIKV+ Sbjct: 181 LNGAEIARSEWIRKGQVPLQTLRANVDYSYRTASTIYGLLGIKVWTFQG 229 >gi|149390306|ref|YP_001294137.1| ribosomal protein S3 [Chloranthus spicatus] gi|172048692|sp|A6MMG1|RR3_CHLSC RecName: Full=30S ribosomal protein S3, chloroplastic gi|146744226|gb|ABQ43298.1| ribosomal protein S3 [Chloranthus spicatus] Length = 220 Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG +S WFA+ Y L ED KI++ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPKSYSRGLQEDEKIKDCIKNYVQKNMRISSDYEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT-----DIEKIRKKLSNMTNSEIHLSVNEVP 107 A I I++ ++I+Y ++ +G +++ +K + N +++ + EV Sbjct: 61 AHIEIKKRIDLIQVIIYMGSKNSLMLIEGPTRGIEELQINVQKEFHSANQRLNIDITEVA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P L+A+ IA+QL++RV FR+AMK+ ++ A + G++V SGR++G E++R E Sbjct: 121 NPYGQPNLLAEYIARQLKKRVSFRKAMKKTIEFAEQADTKGIQVQISGRIDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T +G GIK++V + D+ Sbjct: 181 VREGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWVFVDDK 220 >gi|115605060|ref|YP_784512.1| ribosomal protein S3 [Piper cenocladum] gi|122164323|sp|Q06GM1|RR3_PIPCE RecName: Full=30S ribosomal protein S3, chloroplastic gi|112253789|gb|ABI14510.1| ribosomal protein S3 [Piper cenocladum] Length = 220 Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 MG+KINP+ FRLG N + S WFA+ Y L ED KIR+ +Q ++++ Sbjct: 1 MGKKINPLGFRLGANQSHRSIWFAQSKSYSRGLQEDEKIRDCIQHYVEKNTRISSGFEGK 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVP 107 G++ I I++ ++I+Y P ++ + I++++ + N +++++ V Sbjct: 61 GISHIEIQKKIDLIQVIIYMGSPNSLMEGRTRGIDELQTNVQKEFLSVNRRLNIAIIRVA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP T++A+ IA QL+ RV FR+AMK A++ + G+++ +GR++G E++R E Sbjct: 121 KPYAQPTILAEHIALQLKNRVSFRKAMKSAIELTEQADTKGIQIQIAGRIDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA IDY + T YG GIK+++ L ++ Sbjct: 181 IREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEK 220 >gi|139387431|ref|YP_001122785.1| ribosomal protein S3 [Phaseolus vulgaris] gi|152060540|sp|A4GG84|RR3_PHAVU RecName: Full=30S ribosomal protein S3, chloroplastic gi|112030953|gb|ABH88065.1| ribosomal protein S3 [Phaseolus vulgaris] gi|158187170|gb|ABW22803.1| ribosomal protein S3 [Phaseolus vulgaris] Length = 216 Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 130/216 (60%), Gaps = 11/216 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ ++Y + ED KIR++++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTKYSENIQEDKKIRDWIKNYIQKNIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I K IE+ + + N ++++++ ++ Sbjct: 61 GEIKIQKRIDLIQVIIYMGFPKLLIEGKPHKIEEFQTNMHKKLNCVNKKLNIAIVKITNA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E Sbjct: 121 YKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 EGRVPLQT+RA I+Y T YG GIKV++ + Sbjct: 181 EGRVPLQTIRAKIEYCCYTVRTIYGILGIKVWIFSK 216 >gi|157804029|ref|YP_001492578.1| 30S ribosomal protein S3 [Rickettsia canadensis str. McKiel] gi|189045326|sp|A8EZL0|RS3_RICCK RecName: Full=30S ribosomal protein S3 gi|157785292|gb|ABV73793.1| 30S ribosomal protein S3 [Rickettsia canadensis str. McKiel] Length = 217 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 5/216 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINNSFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G +I+K++K + MT E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNVIIGRSGNEIDKLKKAIEKMTYLQEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLRA IDY TA A T YG G+KV++ + ++ Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYTANKR 215 >gi|78103288|ref|YP_358620.1| ribosomal protein S3 [Phalaenopsis aphrodite subsp. formosana] gi|91207773|sp|Q3BAJ8|RR3_PHAAO RecName: Full=30S ribosomal protein S3, chloroplastic gi|58802818|gb|AAW82538.1| ribosomal protein S3 [Phalaenopsis aphrodite subsp. formosana] Length = 218 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 128/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + L ED +IR ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAKPKNFSIGLQEDERIRNCIKDYVKKNKKISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A I I++ ++I+Y P L+I + +++ +K + N +++++ + KP Sbjct: 61 AYIGIQKRIDFIQVIIYIGFPNLLIEGRTRGVEELQMNVQKEFHSVNRRLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + E Sbjct: 181 EGRVPLQTIRAKIDHCSHTVRTIYGILGIKIWIFVNQE 218 >gi|189095428|ref|YP_001936441.1| 30S ribosomal protein S3 [Heterosigma akashiwo] gi|157694771|gb|ABV66047.1| 30S ribosomal protein S3 [Heterosigma akashiwo] gi|157778002|gb|ABV70188.1| 30S ribosomal protein S3 [Heterosigma akashiwo] Length = 218 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 10/218 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-----QCHLKQAGVAKI 55 MG K +P+ FR+G+ T S WF+ EY LL ED K+RE L +++ +G++KI Sbjct: 1 MGHKTHPMGFRVGITKTHQSSWFSNLKEYSKLLEEDFKLRESLLKFLSSKNIENSGISKI 60 Query: 56 LIERTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEI 111 LI R +I +++A PG+I+GK G +E++ N +I +++ E+ +P Sbjct: 61 LINRNSNGTQIQLEIHTAFPGIIVGKSGKTLEELNTFFEKTFSNNKKIIINLVEITEPYR 120 Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLE 170 A LI I QQLE+R F+R +K+A+ + G +G+KV SGRLNGAE++R+E + Sbjct: 121 EAGLIGDYIVQQLEKRTQFKRVVKKAISLSTSKGNIEGIKVQISGRLNGAEIARSEWVRQ 180 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 GRVPLQTLRA IDY A+T YG G+K+++ + Sbjct: 181 GRVPLQTLRADIDYSYKTAQTTYGILGVKIWLFKGEIF 218 >gi|34581375|ref|ZP_00142855.1| 30S ribosomal protein S3 [Rickettsia sibirica 246] gi|28262760|gb|EAA26264.1| 30S ribosomal protein S3 [Rickettsia sibirica 246] Length = 217 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSILYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|15892923|ref|NP_360637.1| 30S ribosomal protein S3 [Rickettsia conorii str. Malish 7] gi|157828854|ref|YP_001495096.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933581|ref|YP_001650370.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. Iowa] gi|229587003|ref|YP_002845504.1| 30S ribosomal protein S3 [Rickettsia africae ESF-5] gi|238650966|ref|YP_002916822.1| 30S ribosomal protein S3 [Rickettsia peacockii str. Rustic] gi|27734522|sp|Q92GX2|RS3_RICCN RecName: Full=30S ribosomal protein S3 gi|189045327|sp|B0BUQ4|RS3_RICRO RecName: Full=30S ribosomal protein S3 gi|189045328|sp|A8GT63|RS3_RICRS RecName: Full=30S ribosomal protein S3 gi|259495256|sp|C3PPA1|RS3_RICAE RecName: Full=30S ribosomal protein S3 gi|259495257|sp|C4K2H3|RS3_RICPU RecName: Full=30S ribosomal protein S3 gi|15620115|gb|AAL03538.1| 30S ribosomal protein S3 [Rickettsia conorii str. Malish 7] gi|157801335|gb|ABV76588.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908668|gb|ABY72964.1| SSU ribosomal protein S3P [Rickettsia rickettsii str. Iowa] gi|228022053|gb|ACP53761.1| 30S ribosomal protein S3 [Rickettsia africae ESF-5] gi|238625064|gb|ACR47770.1| 30S ribosomal protein S3 [Rickettsia peacockii str. Rustic] Length = 217 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSILYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|307043539|gb|ADN23592.1| ribosomal protein S3 [Almond witches'-broom phytoplasma] Length = 238 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+A + L++ED KIR ++ + +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWRSQWYAEDKQVPNLVYEDFKIRTLIKKFYIRGIISEIEIKRK 60 Query: 61 HKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 N I +++++ GL+ G + K+ +K+ N +I L+V EV + A+L+A Sbjct: 61 KSNSEEITINLFTSKIGLVQGADNKEKNKLLQKIEKTINKKILLNVFEVKTIDKIASLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 Q++A QL++R FR K Q ++ GA GVK+I SGRL GAE++R E G VPL T Sbjct: 121 QNVAMQLQQRSYFRAVQKITTQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLNT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 RA IDY A T YG G++V++ + + + Sbjct: 181 FRADIDYAFEEAHTTYGVLGVQVWIFHGEVLPNK 214 >gi|222099973|ref|YP_002534541.1| 30S ribosomal protein S3 [Thermotoga neapolitana DSM 4359] gi|254764553|sp|B9K892|RS3_THENN RecName: Full=30S ribosomal protein S3 gi|221572363|gb|ACM23175.1| 30S ribosomal protein S3 [Thermotoga neapolitana DSM 4359] Length = 209 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W ++WF Y L ED +IR+ ++ AG+++I IER Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKIIKNKYYHAGISEIYIERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S Sbjct: 60 DAERVNITVKTARPGIIIGRKGAEITSLREELEKRFNRRMVINIEEIKTPELDAQLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ ++ Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKIK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDYGTAVA T YG+ G+KV++ D Sbjct: 180 AIIDYGTAVAWTKYGTIGVKVWIYKGD 206 >gi|149390392|ref|YP_001294391.1| ribosomal protein S3 [Dioscorea elephantipes] gi|172048701|sp|A6MMP6|RR3_DIOEL RecName: Full=30S ribosomal protein S3, chloroplastic gi|148668084|gb|ABR01468.1| ribosomal protein S3 [Dioscorea elephantipes] Length = 216 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 129/214 (60%), Gaps = 11/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPRNFSTGLQEDEKIRNSIKNYIQKNRRISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A+I I++ ++I++ P L+I + IE+++ +K + +N + +++ V KP Sbjct: 61 ARIRIKKRIDLIQVIIHIGFPNLLIEGRTRGIEELQINVQKEFHFSNRRLKIAITRVEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 A ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 YEQANILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+RA ID+ + T YG GIK+++ Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIF 214 >gi|67458676|ref|YP_246300.1| 30S ribosomal protein S3 [Rickettsia felis URRWXCal2] gi|75536859|sp|Q4UMS3|RS3_RICFE RecName: Full=30S ribosomal protein S3 gi|67004209|gb|AAY61135.1| 30S ribosomal protein S3 [Rickettsia felis URRWXCal2] Length = 217 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA V+++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQVSRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+KI+K + MT+ E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKIKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGIIGVKVWIYKGE 209 >gi|114107085|ref|YP_740241.1| ribosomal protein S3 [Liriodendron tulipifera] gi|122239938|sp|Q0G9I0|RR3_LIRTU RecName: Full=30S ribosomal protein S3, chloroplastic gi|113201033|gb|ABI32548.1| ribosomal protein S3 [Liriodendron tulipifera] Length = 219 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 130/219 (59%), Gaps = 12/219 (5%) Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------G 51 MGQKINP+ FRLG N S WFA+ Y L ED KIR+ ++ ++++ G Sbjct: 1 MGQKINPLGFRLGGENQKHRSLWFAQPKSYSIGLQEDEKIRDCIKNYVQKNMRISSGFEG 60 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPK 108 +A I I++ ++I+Y P L+I + IE+++ +K + N +++++ V K Sbjct: 61 IAHIEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFHSVNRRLNIAITRVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 121 PYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWI 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ + ++ Sbjct: 181 REGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219 >gi|189183957|ref|YP_001937742.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Ikeda] gi|226697740|sp|B3CT11|RS3_ORITI RecName: Full=30S ribosomal protein S3 gi|189180728|dbj|BAG40508.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Ikeda] Length = 219 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 139/210 (66%), Gaps = 3/210 (1%) Query: 1 MGQKINPILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI- 57 MGQK+NP +FR G N W S +A + Y L + LKIR+ + A + KILI Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYANKNNYSDFLLKILKIRKIINTEYSFAQITKILIE 60 Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + KN + +Y+ + G+IIGK G DIEK+++ ++ +T++++ +++ EV KPE+ IA Sbjct: 61 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINICEVKKPELEEAFIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 Q+IAQQLERR F++ MK+A+ ++M+ GA G+K+I SGRL G E++R+E Y EGRVPLQT Sbjct: 121 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RA I Y A A T YG G+KV+V D Sbjct: 181 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 210 >gi|172045671|sp|A8F2E1|RS3_RICM5 RecName: Full=30S ribosomal protein S3 Length = 217 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDVINKGFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|15604499|ref|NP_221017.1| 30S ribosomal protein S3 [Rickettsia prowazekii str. Madrid E] gi|6226102|sp|Q9ZCR1|RS3_RICPR RecName: Full=30S ribosomal protein S3 gi|3861193|emb|CAA15093.1| 30S RIBOSOMAL PROTEIN S3 (rpsC) [Rickettsia prowazekii] gi|292572281|gb|ADE30196.1| 30S ribosomal protein S3 [Rickettsia prowazekii Rp22] Length = 217 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 95/216 (43%), Positives = 143/216 (66%), Gaps = 5/216 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKDWDSILYAE-KHYKTLFIQDLKIRDLINKWFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIGK GT+I+K++K + NMT E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGTEIDKLKKAIENMTFLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIAAQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLRA IDY TA A T YG G+KV++ + + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYKENKR 215 >gi|51473833|ref|YP_067590.1| 30S ribosomal protein S3 [Rickettsia typhi str. Wilmington] gi|61215499|sp|Q68W84|RS3_RICTY RecName: Full=30S ribosomal protein S3 gi|51460145|gb|AAU04108.1| 30S ribosomal protein S3 [Rickettsia typhi str. Wilmington] Length = 217 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 143/216 (66%), Gaps = 5/216 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKDWDSILYAE-KHYKTLFIQDLKIRDLINKWFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIGK G++I+K++K + NMT E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGSEIDKLKKAIENMTFLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIAAQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLRA IDY TA A T YG G+KV++ + + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYKENKR 215 >gi|108796849|ref|YP_636422.1| ribosomal protein S3 [Staurastrum punctulatum] gi|91207778|sp|Q32RV4|RR3_STAPU RecName: Full=30S ribosomal protein S3, chloroplastic gi|61393617|gb|AAX45758.1| ribosomal protein S3 [Staurastrum punctulatum] Length = 219 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 88/216 (40%), Positives = 129/216 (59%), Gaps = 13/216 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLK--------IREYLQCHLKQAGV 52 MGQKI+P+ FRLGV + S W + S+Y LL ED K +R+Y++ G+ Sbjct: 1 MGQKIHPLGFRLGVTQSHLSNWCVQPSQYSELLQEDEKLRGCIKEYVRKYVRTAENYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN----EVPK 108 +I I+R ++ +++ P L + K G +++IR+++ N HL EV K Sbjct: 61 DRIEIQRKTSAIKVEIHTGFPKLFVEKLGPRLKEIRREMQNTLQKSKHLKFIISLAEVEK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTEC 167 P AT++A+ IA Q+ERRV FR+ +K+A+Q A G G+K+ +GRLNGAE++R+E Sbjct: 121 PYAKATILAEYIAVQVERRVAFRKTIKKAIQLAKEQGNVKGIKIQIAGRLNGAEIARSEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQTLRA IDY A T YG GI+V++ Sbjct: 181 AREGRVPLQTLRAQIDYCHYPAHTIYGVLGIRVWIF 216 >gi|22711972|ref|NP_683840.1| ribosomal protein S3 [Chaetosphaeridium globosum] gi|27734480|sp|Q8M9V0|RR3_CHAGL RecName: Full=30S ribosomal protein S3, chloroplastic gi|22416976|gb|AAM96576.1| ribosomal protein S3 [Chaetosphaeridium globosum] Length = 255 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 87/252 (34%), Positives = 131/252 (51%), Gaps = 46/252 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------------QCHLK 48 MGQK+NP+ FRLGV +S WFA ++ L ED KIR Y+ Sbjct: 1 MGQKVNPLGFRLGVTQEHHSYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYG 60 Query: 49 QAGVAKILIERTHKNCRIIVYSA-RPGLIIGKKGTDIEKIRKKLSN-------------- 93 +GV+KI I+R + + ++++ P L+I + + + + K + Sbjct: 61 YSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNK 120 Query: 94 ------------------MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135 ++N + +++++V P A ++A+ IA+QLE RV FRRAMK Sbjct: 121 NTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMK 180 Query: 136 RAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +A++ A G G+K+ SGRLNGAE++R E EGRVPLQTLRA IDY A+T YG Sbjct: 181 QAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYG 240 Query: 195 SCGIKVYVSLRD 206 GIKV++ + Sbjct: 241 VLGIKVWIFQGE 252 >gi|15644242|ref|NP_229294.1| ribosomal protein S3 [Thermotoga maritima MSB8] gi|1173254|sp|P46772|RS3_THEMA RecName: Full=30S ribosomal protein S3 gi|4982058|gb|AAD36560.1|AE001798_25 ribosomal protein S3 [Thermotoga maritima MSB8] gi|581804|emb|CAA79783.1| ribosomal protein S3 [Thermotoga maritima] Length = 209 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 93/207 (44%), Positives = 143/207 (69%), Gaps = 2/207 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P FRLG++ W ++WF Y L ED +IR+ ++ AG+++I +ER Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKIIKNKYYHAGISEIYVERP 59 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I V +ARPG+IIG+KG++I +R++L N + +++ E+ PE++A L+A+S Sbjct: 60 DAERINITVKTARPGIIIGRKGSEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ ++ Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKIK 179 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206 A IDYGTA A T YG+ GIKV++ D Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206 >gi|224531795|ref|ZP_03672427.1| ribosomal protein S3 [Borrelia valaisiana VS116] gi|224511260|gb|EEF81666.1| ribosomal protein S3 [Borrelia valaisiana VS116] Length = 291 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA IDYG + A T YG G+KV++ + + Sbjct: 181 LRADIDYGFSEARTTYGIIGVKVWLFKGEVLGRQ 214 >gi|290487106|gb|ADD29937.1| ribosomal protein S3 [Ximenia americana] Length = 218 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 128/218 (58%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG S WFA+ ++ L ED KIR ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKKFSEGLQEDQKIRNCIKNYVQKNMRMLSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P L+I K IE+ +K N N ++++++ + KP Sbjct: 61 ERIEIQKRIDLIQVIIYMGFPKLLIEGKPRGIEELQINIQKELNYVNRKLNIAITRIVKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + +A+ I QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E Sbjct: 121 YGHPNNLAKFITGQLKNRVSFRKAMKKAIELAEQADTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT++A +DY + T YG+ GIK+++ +E Sbjct: 181 EGRVPLQTIQAKMDYCSYPIRTIYGAFGIKIWLFTAEE 218 >gi|124494179|gb|ABN13135.1| ribosomal protein S3 [Almond witches'-broom phytoplasma] Length = 245 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+A + L++ED KIR ++ + +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWRSQWYAEDKQVPNLVYEDFKIRTLIKKFYIRGIISEIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GL+ G + K+ +K+ N +I L+V EV + A+L+ Sbjct: 61 KKSNSEEITINLFTSKIGLVQGADNKEKNKLLQKIEKTINKKILLNVFEVKTIDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ++A QL++R FR K Q ++ GA GVK+I SGRL GAE++R E G VPL Sbjct: 121 AQNVAMQLQQRSYFRAVQKITTQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G++V++ + + + Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVQVWIFHGEVLPNK 215 >gi|239948313|ref|ZP_04700066.1| ribosomal protein S3 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922589|gb|EER22613.1| ribosomal protein S3 [Rickettsia endosymbiont of Ixodes scapularis] Length = 217 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++ Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA Q+E+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 120 AQTIALQIEKRVSFRKAMKTAIQASFKQGGQGIRVNCSGRLGGAEIARTEWYIEGRMPLH 179 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209 >gi|15829052|ref|NP_326412.1| 30S ribosomal protein S3 [Mycoplasma pulmonis UAB CTIP] gi|27734528|sp|Q98PY8|RS3_MYCPU RecName: Full=30S ribosomal protein S3 gi|14089996|emb|CAC13754.1| 30S RIBOSOMAL PROTEIN S3 [Mycoplasma pulmonis] Length = 217 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 83/217 (38%), Positives = 131/217 (60%), Gaps = 4/217 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ N+ W+A ++ L ED KI ++ + ++Q + K+ I+R Sbjct: 1 MGQKVNPNGFRYGITKQHNAIWYAEKKDFSKFLLEDQKIHQFFEKLVRQYLIGKVEIKRD 60 Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLI 116 K + V+SA+ G ++G++G +I+ + +K N +I + V + +PE+NA L+ Sbjct: 61 QKGRVFVGVHSAKRGAMLGQEGKNIQTLTASLQKFLRQKNKDIKIDVINIDQPELNARLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA LE R FR A K A++++++ GA G+K SGRLNG +++RTE Y EG + L Sbjct: 121 AEQIAVDLENRKPFRIAQKFAIRNSLKAGAKGIKTAVSGRLNGVDMARTEGYTEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 TLR +DY A A T YG+ GIKV+VSL + + Sbjct: 181 TLRQKVDYAQATARTTYGAIGIKVWVSLGEILDGGKQ 217 >gi|225551908|ref|ZP_03772848.1| ribosomal protein S3 [Borrelia sp. SV1] gi|225370906|gb|EEH00336.1| ribosomal protein S3 [Borrelia sp. SV1] Length = 293 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQIENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|313199601|ref|YP_004021216.1| ribosomal protein S3 [Isoetes flaccida] gi|291575330|gb|ADE18043.1| ribosomal protein S3 [Isoetes flaccida] Length = 220 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 126/220 (57%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------G 51 MGQK+NP+ FRLG+ +S WFA+ Y L ED ++R ++ ++ + G Sbjct: 1 MGQKVNPLSFRLGITKNHHSHWFAQPKIYSEYLQEDERVRNCIENYVHRHIINSSNYRVG 60 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGK-KGTDIEKIRKK-LSNMTNS--EIHLSVNEVP 107 +A++ I+R + +++ P L+I G IE++++ N+ N +H+++ E+ Sbjct: 61 IARVEIQRKTDLLLVEIHTEFPALLIESSHGQGIEQLKRDVQRNLLNRIQRVHITLTEIA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 ++A+ IA QL RV FRR ++A++ + G+K+ +GRLNGAE++R E Sbjct: 121 GTYGEPNILAKYIALQLRSRVAFRRITRKAIELEKKKNIKGIKIQIAGRLNGAEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQTLRA IDY A+T +G GIKV++ ++ Sbjct: 181 AREGRVPLQTLRAQIDYCYYPAKTIHGILGIKVWIFRDEQ 220 >gi|242910209|ref|YP_002970683.1| ribosomal protein S3 [Alsophila spinulosa] gi|218454878|gb|ACK77215.1| ribosomal protein S3 [Alsophila spinulosa] Length = 228 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 129/219 (58%), Gaps = 11/219 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MG+KI+P+ FRLGVN S FA+ +Y L ED KIR ++ ++++ G+ Sbjct: 1 MGRKIHPLGFRLGVNQKHYSYRFAQMEDYPKFLEEDRKIRTSIEKYVEKHVKDSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109 I I+R RI +++ P L++ + I++++ + +M N ++ +++N V +P Sbjct: 61 GHIEIQRKTDPIRIEIHTGFPDLLVEEHSLGIDQMKSDIEHMLGLGNRKLRITLNNVTQP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ +A QL+ RV FRR MKRA++ R G+K+ +GRLNG+E++R E Sbjct: 121 YGEPKILAEHVASQLKNRVAFRRTMKRAIELVGRTSNKGIKIQIAGRLNGSEMARVEWAR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 EGRVPLQT+RA I Y A+T +G GIK+++ E+ Sbjct: 181 EGRVPLQTIRARISYCYHPAQTIHGVLGIKIWIFRDTEL 219 >gi|329905170|ref|ZP_08274066.1| SSU ribosomal protein S3p (S3e) [Oxalobacteraceae bacterium IMCC9480] gi|327547681|gb|EGF32468.1| SSU ribosomal protein S3p (S3e) [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 101/184 (54%), Positives = 135/184 (73%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91 +L EDLK+R YL+ LK A V +++IER KN RI +YS+RPG++IGKKG DIE ++ L Sbjct: 1 MLIEDLKVRAYLKTKLKNASVGRVVIERPAKNARITIYSSRPGVVIGKKGEDIEVLKTAL 60 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 M +H+++ E+ KPE +A LIA SIAQQLE+R++FRRAMKRA+Q+AMR GA G+K+ Sbjct: 61 GKMMGVPVHVNIEEIRKPETDAQLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKI 120 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 ++SGRLNG E++R E Y EGRVPL TLRA IDYG A T YG GIKV+V D ++ Sbjct: 121 MSSGRLNGIEIARKEWYREGRVPLHTLRADIDYGFGEALTTYGIIGIKVWVYKGDRLASG 180 Query: 212 DSTI 215 ++ Sbjct: 181 ETPT 184 >gi|111115313|ref|YP_709931.1| 30S ribosomal protein S3 [Borrelia afzelii PKo] gi|216263335|ref|ZP_03435330.1| ribosomal protein S3 [Borrelia afzelii ACA-1] gi|123341333|sp|Q0SN23|RS3_BORAP RecName: Full=30S ribosomal protein S3 gi|110890587|gb|ABH01755.1| ribosomal protein S3 [Borrelia afzelii PKo] gi|215980179|gb|EEC21000.1| ribosomal protein S3 [Borrelia afzelii ACA-1] Length = 291 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAHTTYGIIGVKVWLFKGEVLGRQ 214 >gi|223888950|ref|ZP_03623541.1| ribosomal protein S3 [Borrelia burgdorferi 64b] gi|225548608|ref|ZP_03769655.1| ribosomal protein S3 [Borrelia burgdorferi 94a] gi|223885766|gb|EEF56865.1| ribosomal protein S3 [Borrelia burgdorferi 64b] gi|225370638|gb|EEH00074.1| ribosomal protein S3 [Borrelia burgdorferi 94a] Length = 293 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|224532510|ref|ZP_03673135.1| ribosomal protein S3 [Borrelia burgdorferi WI91-23] gi|224512582|gb|EEF82958.1| ribosomal protein S3 [Borrelia burgdorferi WI91-23] Length = 293 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + V EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKVKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRASYRKVLKSSLSASMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|313622223|gb|EFR92744.1| ribosomal protein S3 [Listeria innocua FSL J1-023] Length = 192 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 128/192 (66%) Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 +Y LHEDL+IR+Y+ L A V+++ IER I +++A+PG++IGK G+++E + Sbjct: 1 DYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEAL 60 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV FRRA K+A+Q MR GA Sbjct: 61 RKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAK 120 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG G+KV++ + Sbjct: 121 GIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEV 180 Query: 208 VSDSDSTIPAAE 219 + + + + Sbjct: 181 LPTKKNNVEGGK 192 >gi|15594829|ref|NP_212618.1| 30S ribosomal protein S3 [Borrelia burgdorferi B31] gi|195941621|ref|ZP_03087003.1| 30S ribosomal protein S3 [Borrelia burgdorferi 80a] gi|216264617|ref|ZP_03436609.1| ribosomal protein S3 [Borrelia burgdorferi 156a] gi|218249924|ref|YP_002374994.1| ribosomal protein S3 [Borrelia burgdorferi ZS7] gi|221218009|ref|ZP_03589475.1| ribosomal protein S3 [Borrelia burgdorferi 72a] gi|224533550|ref|ZP_03674139.1| ribosomal protein S3 [Borrelia burgdorferi CA-11.2a] gi|225549467|ref|ZP_03770433.1| ribosomal protein S3 [Borrelia burgdorferi 118a] gi|226321116|ref|ZP_03796658.1| ribosomal protein S3 [Borrelia burgdorferi 29805] gi|226321794|ref|ZP_03797320.1| ribosomal protein S3 [Borrelia burgdorferi Bol26] gi|3915862|sp|P94273|RS3_BORBU RecName: Full=30S ribosomal protein S3 gi|226697666|sp|B7J249|RS3_BORBZ RecName: Full=30S ribosomal protein S3 gi|2688407|gb|AAC66858.1| ribosomal protein S3 (rpsC) [Borrelia burgdorferi B31] gi|215981090|gb|EEC21897.1| ribosomal protein S3 [Borrelia burgdorferi 156a] gi|218165112|gb|ACK75173.1| ribosomal protein S3 [Borrelia burgdorferi ZS7] gi|221191957|gb|EEE18178.1| ribosomal protein S3 [Borrelia burgdorferi 72a] gi|224513223|gb|EEF83585.1| ribosomal protein S3 [Borrelia burgdorferi CA-11.2a] gi|225369744|gb|EEG99191.1| ribosomal protein S3 [Borrelia burgdorferi 118a] gi|226232983|gb|EEH31736.1| ribosomal protein S3 [Borrelia burgdorferi Bol26] gi|226233526|gb|EEH32265.1| ribosomal protein S3 [Borrelia burgdorferi 29805] Length = 293 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|261749464|ref|YP_003257150.1| putative 30S ribosomal protein S3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497557|gb|ACX84007.1| putative 30S ribosomal protein S3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 235 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 143/216 (66%), Gaps = 4/216 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI+ RLG+ W S W + Y + ED K+R Y++ L + V++I IERT Sbjct: 1 MGQKTNPIVNRLGIIMGWQSSWC---NNYKDRIQEDFKVRRYIEARLPKGIVSRIFIERT 57 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + ++RP L+IGK G +++ +RK+L +T E+ ++++EV +PE++A LIA+S+ Sbjct: 58 LKFITITIRTSRPALVIGKGGDEVDTVRKELKKLTKKEVQINISEVRRPELDAPLIAKSL 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QLE R+ +++A+K ++ SAMR A G+K+ SGRLNGAE++R E Y EGR+ L T RA Sbjct: 118 VRQLENRISYKKAIKLSILSAMRMNAQGIKIQISGRLNGAEMARCESYKEGRISLGTFRA 177 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 +DY AVA T YGS G+KV++ + E+ P Sbjct: 178 DVDYHIAVAHTVYGSIGVKVWIM-KGEIYGKRELSP 212 >gi|312148230|gb|ADQ30889.1| ribosomal protein S3 [Borrelia burgdorferi JD1] Length = 293 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|309322368|ref|YP_003934448.1| ribosomal protein S3 [Cathaya argyrophylla] gi|307683294|dbj|BAJ19601.1| ribosomal protein S3 [Cathaya argyrophylla] Length = 217 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDHKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + +M + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLSMLDSVDRKLHIAIEKVTK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P N ++A+ IA QLE+R+ FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYGNPNILAEYIALQLEKRIPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|307683497|dbj|BAJ19727.1| ribosomal protein S3 [Pseudotsuga sinensis var. wilsoniana] Length = 217 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108 A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQIKIYMGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|91228954|ref|ZP_01262849.1| 30S ribosomal protein S3 [Vibrio alginolyticus 12G01] gi|91187474|gb|EAS73811.1| 30S ribosomal protein S3 [Vibrio alginolyticus 12G01] Length = 208 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 1/200 (0%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 ++ L D K+R++L LK+A +++I+IER K+ R+ +++ARPG++IGKKG D+ Sbjct: 1 NTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDV 60 Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 EK+R ++ + +++ EV KPE++A L+ SIA QLERRV+FRRAMKRAVQ+AMR Sbjct: 61 EKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSIASQLERRVMFRRAMKRAVQNAMRL 120 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GA G+KV SGRL GAE++R+E Y EGRVPL TLRA IDY T+ A T YG GIK ++ Sbjct: 121 GAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRADIDYATSSAHTQYGVIGIKTWIF- 179 Query: 205 RDEVSDSDSTIPAAEHRVVE 224 + E+ A E + + Sbjct: 180 KGEILGGMPAANAVEPKGDK 199 >gi|11467230|ref|NP_043062.1| ribosomal protein S3 [Zea mays] gi|48478711|ref|YP_024318.1| ribosomal protein S3 [Saccharum hybrid cultivar SP-80-3280] gi|50812566|ref|YP_054668.1| ribosomal protein S3 [Saccharum officinarum] gi|118614530|ref|YP_899446.1| ribosomal protein S3 [Sorghum bicolor] gi|133933|sp|P06586|RR3_MAIZE RecName: Full=30S ribosomal protein S3, chloroplastic gi|68052949|sp|Q6ENS5|RR3_SACOF RecName: Full=30S ribosomal protein S3, chloroplastic gi|75126330|sp|Q6L3G0|RR3_SACHY RecName: Full=30S ribosomal protein S3, chloroplastic gi|125987748|sp|A1E9W3|RR3_SORBI RecName: Full=30S ribosomal protein S3, chloroplastic gi|12469|emb|CAA68427.1| ribosomal protein S3 [Zea mays] gi|902260|emb|CAA60324.1| ribosomal protein S3 [Zea mays] gi|48478613|gb|AAT44633.1| ribosomal protein S3 [Saccharum hybrid cultivar SP80-3280] gi|49659550|dbj|BAD27331.1| ribosomal protein S3 [Saccharum hybrid cultivar NCo 310] gi|118201164|gb|ABK79534.1| ribosomal protein S3 [Sorghum bicolor] Length = 224 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 17/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKME 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 + I I++ +I++ P L+ K ++EK +K N N +++++ Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V +P ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++ Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224 >gi|51598739|ref|YP_072927.1| 30S ribosomal protein S3 [Borrelia garinii PBi] gi|61215484|sp|Q661D6|RS3_BORGA RecName: Full=30S ribosomal protein S3 gi|51573310|gb|AAU07335.1| ribosomal protein S3 [Borrelia garinii PBi] Length = 292 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|157964800|ref|YP_001499624.1| 30S ribosomal protein S3 [Rickettsia massiliae MTU5] gi|157844576|gb|ABV85077.1| 30S ribosomal protein S3 [Rickettsia massiliae MTU5] Length = 226 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%) Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE Sbjct: 10 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDVINKGFNQAQISRVLIE 68 Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116 R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++ Sbjct: 69 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 128 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL Sbjct: 129 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 188 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 TLRA IDY TA A T YG G+KV++ + Sbjct: 189 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 218 >gi|219685126|ref|ZP_03539946.1| ribosomal protein S3 [Borrelia garinii Far04] gi|219673222|gb|EED30241.1| ribosomal protein S3 [Borrelia garinii Far04] Length = 292 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|260677457|ref|YP_003208225.1| ribosomal protein S3 [Coix lacryma-jobi] gi|209361395|gb|ACI43310.1| ribosomal protein S3 [Coix lacryma-jobi] Length = 224 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 77/224 (34%), Positives = 125/224 (55%), Gaps = 17/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++K+ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIKKNRKKGSNRKME 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 +A I I++ +I++ P L+ K ++EK +K N N +++++ Sbjct: 61 SDSSSEVIAHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V +P ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++ Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKVDIKGIKIQIAGRLAGKEIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224 >gi|228017411|gb|ACP52228.1| ribosomal protein S3 [Larix occidentalis] Length = 217 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108 A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQIKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|219684260|ref|ZP_03539204.1| ribosomal protein S3 [Borrelia garinii PBr] gi|219672249|gb|EED29302.1| ribosomal protein S3 [Borrelia garinii PBr] Length = 292 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|222084124|ref|YP_002519576.1| ribosomal protein S3 [Keteleeria davidiana] gi|220983676|dbj|BAH11442.1| ribosomal protein S3 [Keteleeria davidiana] Length = 217 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHMKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEISRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|313183892|ref|YP_004021746.1| ribosomal protein S3 [Equisetum arvense] gi|281371612|gb|ADA63545.1| ribosomal protein S3 [Equisetum arvense] Length = 218 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 130/216 (60%), Gaps = 11/216 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52 MGQKI+P+ FRLGVN S WF Y ++ ED KIR +Q +++ G+ Sbjct: 1 MGQKIHPLGFRLGVNQNHRSIWFIGTDFYSHVIKEDRKIRNCIQKFVRKNIKNTSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109 A+I I+R I +++ P L++ ++G+ +E+++ + +++H+S+ E+ KP Sbjct: 61 ARIEIKRKTDLINITIHTGFPDLLMEERGSGMEQLKSTIQKELIYKRNKLHISLIELEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QLE RV FRR MK+A++ + +G+K+ SGRLNG E++R+E Sbjct: 121 YREPKILAEHIASQLENRVAFRRTMKKAIELFEKTNNNGIKIQISGRLNGNEIARSEWVR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 EGR+PLQTLRA I+Y A+T YG GIKV++ Sbjct: 181 EGRIPLQTLRASINYSYYPAQTIYGVLGIKVWIFQN 216 >gi|124494176|gb|ABN13133.1| ribosomal protein S3 [Picris echioides phyllody phytoplasma] Length = 248 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYVEDKQVPNLVHEDFKIRNLIKKFYMRGIISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGVDNKTKNKLLQKIEKIINKKVLINVFEVKTLDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K + Q ++ GA GVK+I SGRL GAE++R E G VPL Sbjct: 121 AQNIAIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G++V++ + + Sbjct: 181 TFRADIDYALEEAHTTYGVLGVQVWIFHGEVFPNK 215 >gi|224179521|ref|YP_002601055.1| ribosomal protein S3 [Monomastix sp. OKE-1] gi|217314564|gb|ACK36907.1| ribosomal protein S3 [Monomastix sp. OKE-1] Length = 235 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 24/229 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA-----RGS----EYGALLHEDLKIREYLQCHLKQAG 51 MGQKI+P+ R+G+ S WFA + Y A + +D +R++ L+ AG Sbjct: 1 MGQKIHPLGLRIGIFQKHKSEWFAPVGSSNSNQSIPNYAAFIEQDKGVRDFFSSELRDAG 60 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE------ 105 ++KILI R + ++ A+P L++G+ G +++++ +K + N Sbjct: 61 LSKILISRRTNRLFVELHVAQPKLVLGENGNNLKQLTEKFQKNIQKLLSRHNNPSMSAPA 120 Query: 106 -----VPKPE----INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 V P+ +ATL+ Q IA+QLE+RV FRR MK+++Q A GA+G+K+ +GR Sbjct: 121 LSIQVVQIPQEEIATDATLLGQKIAEQLEKRVAFRRVMKQSIQQARAAGAEGIKIQIAGR 180 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LNGAE++RTE EGRVPLQTL+A+IDY A+T YG GIK+++ Sbjct: 181 LNGAEIARTEWAREGRVPLQTLKANIDYCYETAQTIYGILGIKIWIFKG 229 >gi|307697311|gb|ADN86110.1| ribosomal protein S3 [Chasmanthium latifolium] Length = 224 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/224 (33%), Positives = 124/224 (55%), Gaps = 17/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 + I I++ +I++ P L+ K ++EK +K N N +++++ Sbjct: 61 SDPSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++ Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224 >gi|312149741|gb|ADQ29812.1| ribosomal protein S3 [Borrelia burgdorferi N40] Length = 293 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIVGVKVWLFKGEVLGRQ 214 >gi|225544161|ref|YP_002720150.1| rps3 [Jatropha curcas] gi|224979602|gb|ACN72729.1| rps3 [Jatropha curcas] Length = 221 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 123/217 (56%), Gaps = 13/217 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++KQ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEDLQEDQKIRNCIKNYVKQNTKISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-----EIHLSVNEVP 107 A+I I++ ++++Y L++ + IE+++ + N I + + + Sbjct: 61 ARIEIQKRIDVIQVMIYMGFQKLLMEGRPKQIEELQMNVQKELNYVNRKLNIAIKIKRIS 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E Sbjct: 121 NPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRLDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 EGRVPLQT++A I+Y + +T YG GIK++ L Sbjct: 181 IREGRVPLQTIQAKIEYCSYTVKTIYGVLGIKIWTFL 217 >gi|18860350|ref|NP_569667.1| ribosomal protein S3 [Psilotum nudum] gi|27734483|sp|Q8WHY4|RR3_PSINU RecName: Full=30S ribosomal protein S3, chloroplastic gi|18389503|dbj|BAB84255.1| ribosomal protein S3 [Psilotum nudum] Length = 220 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCH--------LKQAG 51 MGQKI+P+ FRLG S WFA+ Y L+ ED +IR ++ + G Sbjct: 1 MGQKIHPLGFRLGTTQNHCSYWFAQSKKIYSKLVKEDKEIRNCIEKYVQKHTNNPFHYGG 60 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 +A+I I R R+ ++ L+ G E+++ + + N ++ L + ++ K Sbjct: 61 IARIEIYRKTDLIRVEIHMGFTDLLTENGGIRFEQLKSNIEKIVNSKNQKLCLILIKIDK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG-VKVIASGRLNGAELSRTEC 167 P ++A+ IA QLE RVVFR+A+K+A++ A F G +K+ +GRLNG E++R E Sbjct: 121 PYTEPKVLAEYIALQLENRVVFRKAVKKALELAGNFKNKGGIKIQIAGRLNGIEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RAHI+Y A+T YG GIKV++ DE Sbjct: 181 TREGRVPLQTIRAHINYYYYPAKTIYGILGIKVWIYQNDE 220 >gi|309322301|ref|YP_003934152.1| ribosomal protein S3 [Cedrus deodara] gi|228016590|gb|ACP51420.1| ribosomal protein S3 [Abies firma] gi|228017097|gb|ACP51919.1| ribosomal protein S3 [Cedrus deodara] gi|307683227|dbj|BAJ19535.1| ribosomal protein S3 [Cedrus deodara] Length = 217 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|167967949|ref|ZP_02550226.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra] Length = 205 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 87/179 (48%), Positives = 124/179 (69%), Gaps = 2/179 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ + Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119 Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL +L Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHSL 178 >gi|124494173|gb|ABN13131.1| ribosomal protein S3 [Knautia arvensis phyllody phytoplasma] Length = 248 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYVEDKQVPNLVHEDFKIRNLIKKFYIRGIISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G +K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKDKLLQKIEKIINKKVLINVFEVKALDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K + Q ++ GA G+K+I SGRL GAE++R+E G VPL Sbjct: 121 AQNIAIQLQQRNYFRAVQKISAQKVLKSGAKGIKIILSGRLGGAEIARSETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G+KV++ + + + Sbjct: 181 TFRADIDYALEEAYTTYGVLGVKVWIFHGEVLPNK 215 >gi|124494188|gb|ABN13141.1| ribosomal protein S3 [Spirea stunt phytoplasma] Length = 277 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P RLG+ W+S+W A + L+ ED +IR + H +A ++++ Sbjct: 1 MGQKSSPTGLRLGIIRNWDSKWHAEDKQVPNLILEDYQIRNLINNHYPKATISRMKFXVL 60 Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 N I +Y+++ G++ G + + K+ +K+ + +I L+V E+ P+ A L+A Sbjct: 61 KINXEQIPIFLYTSKLGIVGGPEXKEKNKLVEKIKKLIKKDIILNVLEIKNPDKVAILVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 Q++A QLE+R FR A K VQ ++ G GVK+I SGRL GAE++R E +G VPL T Sbjct: 121 QNLAIQLEQRAFFRAAQKMTVQKVLKTGVKGVKIIISGRLGGAEIARQETLSKGLVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA IDY A T YG G+KV++ + + Sbjct: 181 LRADIDYAFEEAHTTYGVLGVKVWIYHGEVLPKQ 214 >gi|26554457|ref|NP_758391.1| ribosomal protein S3 [Mycoplasma penetrans HF-2] gi|81747361|sp|Q8EUC1|RS3_MYCPE RecName: Full=30S ribosomal protein S3 gi|26454467|dbj|BAC44795.1| ribosomal protein S3 [Mycoplasma penetrans HF-2] Length = 417 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 137/229 (59%), Gaps = 3/229 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP RLG+N W SRW A+ + L +D KIR+++ K A V+ + IER Sbjct: 1 MGQKVNPNGLRLGINRNWESRWVAKDNRQTALWLVQDDKIRKHIFKVCKAAQVSHVEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117 T I ++ ++PG+++GK+ ++++ ++++LS + + ++++V + KP +A +IA Sbjct: 61 TQNKVDIFIHCSQPGIVLGKEMSNLKVLKQQLSYIVGRKTKVNVNVLPLDKPTFSARIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IA +E R FR A K A++ + GA G+K SGRL G E++R E Y EG VPL T Sbjct: 121 REIADAIENRFSFRNAQKIAIKKVLASGAKGIKTNVSGRLGGVEMAREEGYSEGIVPLTT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 LRA+IDY A T YG G+KV+++ + + S E + +EK Sbjct: 181 LRANIDYALEEAWTTYGLIGVKVWINRGELFKKNFSQNTKFEKKPIEKK 229 >gi|307683591|dbj|BAJ19774.1| ribosomal protein S3 [Larix decidua] Length = 217 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 124/214 (57%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108 A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQIKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 RVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGDRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|108796884|ref|YP_636182.1| ribosomal protein S3 [Pseudendoclonium akinetum] gi|91207774|sp|Q3ZJ85|RR3_PSEAK RecName: Full=30S ribosomal protein S3, chloroplastic gi|56159582|gb|AAV80606.1| ribosomal protein S3 [Pseudendoclonium akinetum] Length = 229 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 21/227 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQKI+P+ FRLG+ S+W+A+ S+Y L+ ED K+R+ L +A + I+I+R Sbjct: 1 MGQKIHPLGFRLGITQEHRSKWYAKASDYPRLVLEDKKLRDNLFKQYPKANIVDIIIKRR 60 Query: 60 ----------THKNCRIIVYSARPGLIIGKKGTDI----------EKIRKKLSNMTNSEI 99 + + +Y+A PG IIG+ I ++ + N+ I Sbjct: 61 QTTQDLETKESVDVIEVSIYTAVPGKIIGRSKATITELKESLEKLCQLDRMKHNLPQIRI 120 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 L++ +V P +A++IA + +QLE+R+ FR A+K+A++ +G+K+ SGRLNG Sbjct: 121 ILTILKVQNPYSSASVIADYLIEQLEQRIPFRAALKKALERIRLAKLEGIKIEISGRLNG 180 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 AE++R+E +GRVPLQTLRA IDY A+T YG GIKV+ + Sbjct: 181 AEIARSEWVRKGRVPLQTLRADIDYSAKTAKTIYGILGIKVWAFKGE 227 >gi|133929|sp|P16631|RR3_GRATE RecName: Full=30S ribosomal protein S3, chloroplastic gi|552546|gb|AAA84292.1| ribosomal protein rps3 [Gracilaria tenuistipitata] Length = 209 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 127/201 (63%), Gaps = 2/201 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ FR+G+ S WF+ Y L ED KIR ++ L A ++ I I+R Sbjct: 1 MGQKTHPLGFRIGITRDHKSSWFSNIKSYPKLAQEDYKIRSCIEKQLHNASISLIYIDRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 ++ +++ARPG+I+GK G +E +RKKL + +I +++ E+ P+ ATLIA+ Sbjct: 61 VAQVQVHIHTARPGIILGKLGRGLEDLRKKLETTLKNDTQIRINLIEITDPDKEATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 I Q+LE+R+ FRR +++A+Q A + G+K+ SGRLNG+E++R E EGRVPLQTL Sbjct: 121 FIVQRLEKRIAFRRVIRQAMQRAQKAKNQGIKIQVSGRLNGSEIARIESVREGRVPLQTL 180 Query: 179 RAHIDYGTAVAETAYGSCGIK 199 RAHIDY T YG G+K Sbjct: 181 RAHIDYSYKTTHTIYGILGVK 201 >gi|262341019|ref|YP_003283874.1| 30S ribosomal protein S3 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272356|gb|ACY40264.1| 30S ribosomal protein S3 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 231 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 92/227 (40%), Positives = 146/227 (64%), Gaps = 4/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NPI+ RLG+ W S W + Y + ED K+R Y++ L + V++I IERT Sbjct: 1 MGQKTNPIVNRLGIITGWQSSWC---NNYKDRIQEDFKVRRYIEARLPKGIVSRIFIERT 57 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K I + ++RP L+IGK G +++ +RK+L +T E+ ++++EV +PE++A L+A+ I Sbjct: 58 LKFITITIRTSRPALVIGKGGDEVDTVRKELKKLTKKEVQINISEVKRPELDAPLVAKGI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 +QLE R+ +++A+K ++ SAMR A G+++ SGRLNG+E++R E Y EGR+ L T RA Sbjct: 118 VRQLENRISYKKAIKLSILSAMRMNAQGIRIQISGRLNGSEMARCETYKEGRISLGTFRA 177 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +DY +VA T YGS GIKV++ + EV P + ++ + Sbjct: 178 DVDYHMSVANTVYGSIGIKVWIM-KGEVYGKRELSPFLGMQKKQRGN 223 >gi|323148867|ref|YP_004221959.1| ribosomal protein S3 [Erodium carvifolium] gi|316926331|gb|ADU58184.1| ribosomal protein S3 [Erodium carvifolium] Length = 223 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 120/222 (54%), Gaps = 15/222 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53 MGQKINP+ FRLG +S WF +Y L ED KIR+ ++ ++ ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSIWFEEPKKYCEGLQEDQKIRDRIKNYIDNHRASPLTDLIS 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------MTNSEIHLSVNE 105 +I IE++ ++I+Y P +I K +I+ + K N ++ + + + Sbjct: 61 RIQIEKSIDLVQVIIYLGFPEFLIEVKPPEIKAAKMKELKGNVEKVRHSGNRDLKIVIRK 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 + P + ++A +A QL+ RV FR+AMK+ ++ A + A G++V +GR++G E++R Sbjct: 121 IGNPYRDPQILAAFLADQLKNRVPFRKAMKKTIELAEKAYAKGIQVQIAGRIDGKEIARV 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 E +GRV LQT+R ID+ + T +G GIK++V E Sbjct: 181 EWLRKGRVSLQTIRTQIDFCSTTVGTIHGVLGIKIWVFANRE 222 >gi|29565652|ref|NP_817232.1| ribosomal protein S3 [Pinus koraiensis] gi|324986391|ref|YP_004276263.1| ribosomal protein S3 [Pinus lambertiana] gi|34924924|sp|Q85WZ0|RR3_PINKO RecName: Full=30S ribosomal protein S3, chloroplastic gi|29469751|gb|AAO74079.1| ribosomal protein S3 [Pinus koraiensis] gi|228016147|gb|ACP50984.1| ribosomal protein S3 [Pinus sibirica] gi|228016274|gb|ACP51109.1| ribosomal protein S3 [Pinus strobus] gi|228016653|gb|ACP51482.1| ribosomal protein S3 [Pinus albicaulis] gi|228016785|gb|ACP51612.1| ribosomal protein S3 [Pinus armandii] gi|228016910|gb|ACP51735.1| ribosomal protein S3 [Pinus ayacahuite] gi|228017155|gb|ACP51976.1| ribosomal protein S3 [Pinus cembra] gi|228017278|gb|ACP52097.1| ribosomal protein S3 [Pinus flexilis] gi|228017343|gb|ACP52161.1| ribosomal protein S3 [Pinus lambertiana] gi|228017537|gb|ACP52352.1| ribosomal protein S3 [Pinus monticola] gi|228017599|gb|ACP52413.1| ribosomal protein S3 [Pinus parviflora var. pentaphylla] gi|228017663|gb|ACP52476.1| ribosomal protein S3 [Pinus peuce] gi|323514240|gb|ADX89787.1| ribosomal protein S3 [Pinus lambertiana] Length = 217 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSADRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|237688624|ref|YP_002905241.1| ribosomal protein S3 [Pinus gerardiana] gi|237688692|ref|YP_002905308.1| ribosomal protein S3 [Pinus krempfii] gi|324986462|ref|YP_004276333.1| ribosomal protein S3 [Pinus monophylla] gi|324986534|ref|YP_004276404.1| ribosomal protein S3 [Pinus nelsonii] gi|226876084|gb|ACO89340.1| ribosomal protein S3 [Pinus gerardiana] gi|226951149|gb|ACO94212.1| ribosomal protein S3 [Pinus krempfii] gi|228016213|gb|ACP51049.1| ribosomal protein S3 [Pinus squamata] gi|228016722|gb|ACP51550.1| ribosomal protein S3 [Pinus aristata] gi|323522557|gb|ADX94899.1| ribosomal protein S3 [Pinus monophylla] gi|323522722|gb|ADX94970.1| ribosomal protein S3 [Pinus nelsonii] Length = 217 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214 >gi|148377803|ref|YP_001256679.1| 30S ribosomal protein S3 [Mycoplasma agalactiae PG2] gi|226697733|sp|A5IYY0|RS3_MYCAP RecName: Full=30S ribosomal protein S3 gi|148291849|emb|CAL59239.1| 30S ribosomal protein S3 [Mycoplasma agalactiae PG2] Length = 216 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 4/216 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + I+RT Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTSIKRT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116 + +++ +++P ++G+ G +IEKI + L ++ +V +PE+NA L Sbjct: 61 KAQKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNKSLDINLQVSLLKQPELNARLA 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSSGEMRLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLR +D+ A A T YG+ G+KV++S + + Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216 >gi|254553689|gb|ACT67303.1| ribosomal protein S3 [Joinvillea plicata] Length = 224 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 17/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNKKIASNRKIA 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKK-GTDIEKIRKKLSNMTNSEIHLSV 103 +A I I++ +I++ P L+ K+ +++ +K N N +++++ Sbjct: 61 SDSSSEVIAHIEIQKQIDVIHVIIHVGFPNLLKQKRVIKELQMNVQKEINSVNQRLNIAI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V +P ++A+ IA QL++RV FR+AMK+A+ + GV+V +GRL G E++ Sbjct: 121 AKVQEPYRQPNILAEYIASQLKKRVSFRKAMKKAIDLTKKTDTKGVQVQIAGRLGGKEIA 180 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R E +GR+PLQT+RA ID+ T YG G+K+++ + +E Sbjct: 181 RAEWIRKGRLPLQTIRAKIDHCCYPIRTIYGVLGLKIWIFVEEE 224 >gi|304373184|ref|YP_003856393.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis HUB-1] gi|304309375|gb|ADM21855.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis HUB-1] Length = 243 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 131/224 (58%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ W+A ++ L ED+KI + + ++ + I R Sbjct: 1 MGQKVNPNGFRYGVTKEHNAIWYADKKDFAPNLLEDVKIHRFFEKLTREYLIGNTKIRRD 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N ++VY+A+ G +G+ G++++KI + + ++ +++ E+ KP+++A L+ Sbjct: 61 QDNKVTVVVYTAKLGTFLGQSGSNLKKIIEDVKKYVKNKKLVLNIDAVEIEKPDLDAKLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+SIA +LE R +R A K A++ A + GA G+K SGRLNG +++R+E Y EG + L Sbjct: 121 AESIAIKLENRGSYRMAQKFAIRLAQKAGAKGIKTKVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLR + Y TA A T YG+ G+KV+VSL + + + E Sbjct: 181 TLRQDVSYATATARTTYGALGVKVWVSLGEVFAKQNQAYNEEEP 224 >gi|291320500|ref|YP_003515764.1| 30S ribosomal protein S3 [Mycoplasma agalactiae] gi|290752835|emb|CBH40810.1| 30S ribosomal protein S3 [Mycoplasma agalactiae] Length = 216 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 4/216 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + I+RT Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTSIKRT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116 + +++ +++P ++G+ G +IEKI + L ++ +V +PE+NA L Sbjct: 61 KAQKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNKSLDINLQVSLLKQPELNARLA 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSRGEMRLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLR +D+ A A T YG+ G+KV++S + + Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216 >gi|228016092|gb|ACP50930.1| ribosomal protein S3 [Pinus rzedowskii] Length = 217 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214 >gi|124494167|gb|ABN13127.1| ribosomal protein S3 [Rhynchosia little leaf phytoplasma] Length = 235 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G+KV++ + +S+ Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKVWIFHGEVLSNK 215 >gi|148284208|ref|YP_001248298.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Boryong] gi|172047210|sp|A5CCK6|RS3_ORITB RecName: Full=30S ribosomal protein S3 gi|146739647|emb|CAM79436.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Boryong] Length = 218 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 139/210 (66%), Gaps = 4/210 (1%) Query: 1 MGQKINPILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI- 57 MGQK+NP +FR G N W S +A + Y L + LKIR+ + A + KILI Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYA-KNNYSDFLLKILKIRKIINTEYSFAQITKILIE 59 Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + KN + +Y+ + G+IIGK G DIEK+++ ++ +T++++ +++ EV KPE+ IA Sbjct: 60 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINIREVKKPELEEAFIA 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 Q+IAQQLERR F++ MK+A+ ++M+ GA G+K+I SGRL G E++R+E Y EGRVPLQT Sbjct: 120 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 179 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RA I Y A A T YG G+KV+V D Sbjct: 180 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 209 >gi|330723956|gb|AEC46326.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis MCLD] Length = 243 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 131/224 (58%), Gaps = 4/224 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR GV N+ W+A ++ L ED+KI + + ++ + I R Sbjct: 1 MGQKVNPNGFRYGVTKEHNAIWYADKKDFAPNLLEDVKIHRFFEKITREYLIGNTKIRRD 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N ++VY+A+ G +G+ G++++KI + + ++ +++ E+ KP+++A L+ Sbjct: 61 QDNKVTVVVYTAKLGTFLGQSGSNLKKIIEDVKKYVKNKKLVLNIDAVEIEKPDLDAKLL 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+SIA +LE R +R A K A++ A + GA G+K SGRLNG +++R+E Y EG + L Sbjct: 121 AESIAIKLENRGSYRMAQKFAIRLAQKAGAKGIKTKVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 TLR + Y TA A T YG+ G+KV+VSL + + + E Sbjct: 181 TLRQDVSYATATARTTYGALGVKVWVSLGEVFAKQNQAYNEEEP 224 >gi|308190089|ref|YP_003923020.1| 30S ribosomal protein S3 [Mycoplasma fermentans JER] gi|319777385|ref|YP_004137036.1| 30S ribosomal protein s3 [Mycoplasma fermentans M64] gi|307624831|gb|ADN69136.1| 30S ribosomal protein S3 [Mycoplasma fermentans JER] gi|318038460|gb|ADV34659.1| 30S ribosomal protein S3 [Mycoplasma fermentans M64] Length = 224 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK+NP FR G+ N+ WFA + YG L ED KI ++ +++ + ++ I+R Sbjct: 1 MGQKVNPNGFRYGITKARNTSWFAEKANYGKYLVEDAKIYKFFDKLVRKYQIGQVEIKRN 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116 + ++SA P ++ + G+ I+KI L N +I+L V + PE+NA L Sbjct: 61 QANKITVYIHSATPNKLVSEGGSTIDKINVDLHKYLKNKNLDINLQVVLLKNPELNARLA 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IA +LE R FR A K + A++ GA G+K SGRLNG +++RTE Y G + L Sbjct: 121 AEAIATKLENRESFRIAQKLIINDALKAGAKGIKTAVSGRLNGVDMARTEGYSRGEMRLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 TLR +DY A A T YG G+KV++S + + Sbjct: 181 TLRQDVDYAHANAHTTYGVIGVKVWISKGEILEG 214 >gi|238810291|dbj|BAH70081.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 225 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK+NP FR G+ N+ WFA + YG L ED KI ++ +++ + ++ I+R Sbjct: 2 MGQKVNPNGFRYGITKARNTSWFAEKANYGKYLVEDAKIYKFFDKLVRKYQIGQVEIKRN 61 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116 + ++SA P ++ + G+ I+KI L N +I+L V + PE+NA L Sbjct: 62 QANKITVYIHSATPNKLVSEGGSTIDKINVDLHKYLKNKNLDINLQVVLLKNPELNARLA 121 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IA +LE R FR A K + A++ GA G+K SGRLNG +++RTE Y G + L Sbjct: 122 AEAIATKLENRESFRIAQKLIINDALKAGAKGIKTAVSGRLNGVDMARTEGYSRGEMRLH 181 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 TLR +DY A A T YG G+KV++S + + Sbjct: 182 TLRQDVDYAHANAHTTYGVIGVKVWISKGEILEG 215 >gi|237688555|ref|YP_002905173.1| ribosomal protein S3 [Pinus contorta] gi|226875383|gb|ACO89121.1| ribosomal protein S3 [Pinus contorta] gi|228016974|gb|ACP51798.1| ribosomal protein S3 [Pinus banksiana] Length = 217 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRNIDLIKVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214 >gi|7524693|ref|NP_042447.1| ribosomal protein S3 [Pinus thunbergii] gi|1173252|sp|P41635|RR3_PINTH RecName: Full=30S ribosomal protein S3, chloroplastic gi|1262687|dbj|BAA04403.1| ribosomal protein S3 [Pinus thunbergii] gi|228015956|gb|ACP50796.1| ribosomal protein S3 [Pinus ponderosa] gi|228016023|gb|ACP50862.1| ribosomal protein S3 [Pinus resinosa] gi|228016338|gb|ACP51172.1| ribosomal protein S3 [Pinus taeda] gi|228016409|gb|ACP51242.1| ribosomal protein S3 [Pinus thunbergii] gi|228016475|gb|ACP51307.1| ribosomal protein S3 [Pinus torreyana subsp. insularis] gi|228016536|gb|ACP51367.1| ribosomal protein S3 [Pinus torreyana subsp. torreyana] gi|228017038|gb|ACP51861.1| ribosomal protein S3 [Pinus canariensis] gi|228017474|gb|ACP52290.1| ribosomal protein S3 [Pinus merkusii] gi|228017730|gb|ACP52542.1| ribosomal protein S3 [Pinus pinaster] Length = 217 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVEIRRKIDLIKVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214 >gi|313678371|ref|YP_004056111.1| 30S ribosomal protein S3 [Mycoplasma bovis PG45] gi|312950283|gb|ADR24878.1| ribosomal protein S3 [Mycoplasma bovis PG45] Length = 216 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 4/216 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + LI+RT Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTLIKRT 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116 + +++ +++P ++GK GT+IEKI K L ++ +V +PE+NA L Sbjct: 61 KAQKVTVVLQTSQPAKLLGKNGTNIEKITKDLQKYLKNKSLDINLQVSLLKQPELNARLA 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSRGEMRLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 TLR +D+ A A T YG+ G+KV++S + + Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216 >gi|256370786|ref|YP_003108611.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri SMDSEM] gi|256009578|gb|ACU52938.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri SMDSEM] Length = 233 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 3/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+N + RLG+ W S W + Y + ED K+R+YL+ L + V++I IER Sbjct: 1 MGHKVNTLSNRLGLIFGWQSLW---SNNYPERIKEDFKLRKYLENRLAKYNVSRIYIERN 57 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + ++RP +IIGK G ++EK++K+L +T I +++ E+ PE++A L+A++I Sbjct: 58 LNRVNITISTSRPAMIIGKGGEEVEKLKKELKVLTKKVIQINIFEIKNPELDAVLVAKTI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A++LE + +++A+K + +A+RF A+G+K+ SGRLNGAE++RTE Y EGR+PL T RA Sbjct: 118 ARKLENKFSYKKAIKICLAAALRFNAEGIKIKISGRLNGAEMARTETYKEGRIPLSTFRA 177 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A A T YG GIKV++ + D Sbjct: 178 DIDYSMAEAHTNYGIIGIKVWIMKGEIYGKKD 209 >gi|224534786|ref|ZP_03675358.1| ribosomal protein S3 [Borrelia spielmanii A14S] gi|224514034|gb|EEF84356.1| ribosomal protein S3 [Borrelia spielmanii A14S] Length = 291 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISNIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + +++ + RPG +IG KG ++EKI + L+ +I + + EV +PE++A +IA Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGANLEKIGQLLTKKIFKKISIKIKEVKRPELDAQIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG + A+T YG G+KV++ + + Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214 >gi|237688492|ref|YP_002905111.1| ribosomal protein S3 [Picea sitchensis] gi|6094138|sp|O62951|RR3_PICAB RecName: Full=30S ribosomal protein S3, chloroplastic gi|2959583|gb|AAC95497.1| ribosomal protein S3 [Picea abies] gi|148905984|gb|ABR16153.1| unknown [Picea sitchensis] gi|226875320|gb|ACO89059.1| ribosomal protein S3 [Picea sitchensis] gi|307683685|dbj|BAJ19821.1| ribosomal protein S3 [Picea morrisonicola] Length = 218 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 13/215 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLII--GKKGTDIEKIRKKLSNM---TNSEIHLSVNEVP 107 A++ I R ++ +Y P L++ G+ IEK++ + NM + ++H+++ +V Sbjct: 61 ARVEISRKIDLIQVKIYIGFPNLLLIEGRGFQGIEKLKNDVLNMLDSVDRKLHIAIEKVA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 KPYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GRVPLQT+RA IDY +T YG GIK+++ Sbjct: 181 DRGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 215 >gi|159106902|ref|YP_001531320.1| ribosomal protein S3 [Lolium perenne] gi|172048166|sp|A8Y9C5|RR3_LOLPR RecName: Full=30S ribosomal protein S3, chloroplastic gi|158934436|emb|CAO86014.1| ribosomal protein S3 [Lolium perenne] Length = 239 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEIHSVNQRLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|124494170|gb|ABN13129.1| ribosomal protein S3 [Gliricidia little leaf phytoplasma] Length = 248 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYMKGVISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G+KV++ + +S+ Sbjct: 181 TFRADIDYAFGEAHTTYGVLGVKVWIFHGEVLSNK 215 >gi|42561264|ref|NP_975715.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|83319775|ref|YP_424654.1| 30S ribosomal protein S3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|331703710|ref|YP_004400397.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|61215584|sp|Q6MSN1|RS3_MYCMS RecName: Full=30S ribosomal protein S3 gi|90110062|sp|P02353|RS3_MYCCT RecName: Full=30S ribosomal protein S3 gi|42492762|emb|CAE77357.1| 30S RIBOSOMAL PROTEIN S3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|83283661|gb|ABC01593.1| ribosomal protein S3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|256383745|gb|ACU78315.1| ribosomal protein S3 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384576|gb|ACU79145.1| ribosomal protein S3 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455590|gb|ADH21825.1| ribosomal protein S3 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|301321306|gb|ADK69949.1| ribosomal protein S3 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] gi|328802265|emb|CBW54419.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 233 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 3/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+A Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLEG VPL T Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 LR +IDY A T YG G+KV+++ + Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211 >gi|313665571|ref|YP_004047442.1| ribosomal protein S3 [Mycoplasma leachii PG50] gi|312950053|gb|ADR24649.1| ribosomal protein S3 [Mycoplasma leachii PG50] Length = 233 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 3/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+A Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE YLEG VPL T Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGVKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 LR +IDY A T YG G+KV+++ + Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211 >gi|121511596|gb|ABM55292.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma] gi|121511599|gb|ABM55294.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma] gi|121511602|gb|ABM55296.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma] Length = 248 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G+KV++ + +S+ Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKVWIFHGEVLSNK 215 >gi|11466828|ref|NP_039424.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|50234010|ref|YP_052788.1| ribosomal protein S3 [Oryza nivara] gi|109156623|ref|YP_654242.1| ribosomal protein S3 [Oryza sativa Indica Group] gi|68052945|sp|Q6END5|RR3_ORYNI RecName: Full=30S ribosomal protein S3, chloroplastic gi|148840859|sp|P0C483|RR3_ORYSA RecName: Full=30S ribosomal protein S3, chloroplastic gi|148840860|sp|P0C484|RR3_ORYSI RecName: Full=30S ribosomal protein S3, chloroplastic gi|148840861|sp|P0C485|RR3_ORYSJ RecName: Full=30S ribosomal protein S3, chloroplastic gi|12025|emb|CAA33934.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|42795515|gb|AAS46082.1| ribosomal protein S3 [Oryza sativa Indica Group] gi|42795581|gb|AAS46147.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|42795645|gb|AAS46210.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|49615034|dbj|BAD26817.1| ribosomal protein S3 [Oryza nivara] gi|50725165|dbj|BAD33782.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|51091521|dbj|BAD36259.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|218200203|gb|EEC82630.1| hypothetical protein OsI_27221 [Oryza sativa Indica Group] gi|218202023|gb|EEC84450.1| hypothetical protein OsI_31072 [Oryza sativa Indica Group] gi|290790601|gb|ADD62861.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|290790670|gb|ADD62929.1| ribosomal protein S3 [Oryza meridionalis] gi|226646|prf||1603356BW ribosomal protein S3 Length = 239 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|11466969|ref|NP_054390.1| ribosomal protein S3 [Epifagus virginiana] gi|266974|sp|P30055|RR3_EPIVI RecName: Full=Plastid 30S ribosomal protein S3 gi|336936|gb|AAA65864.1| ribosomal protein S3 [Epifagus virginiana] Length = 220 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 13/220 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ Y + ED KIR++++ ++K G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYYKGIQEDQKIRDFIKNYVKNNIIISPDTEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR-----KKLSNMTNSEIHLSVNEVP 107 A I I++ +I+++ +I + I K KK + N ++ + + + Sbjct: 61 AYIEIQKRIDFLKIMIFIGFKKFLIENRQLGIIKEALHIDLKKNFHYVNRKLIIDIIRIT 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP N ++A+ IA QL+ RV FR+ MK+A++ G++V SGR++G E++R E Sbjct: 121 KPYRNPNILAEFIADQLKNRVSFRKTMKKAIELTESEDTKGIQVQISGRIDGKEIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT++A I+Y + + T +G GIK+++ + E Sbjct: 181 IREGRVPLQTIQAKINYCSYMVRTTHGVLGIKIWIFIEKE 220 >gi|290790739|gb|ADD62997.1| ribosomal protein S3 [Oryza australiensis] Length = 239 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|255961420|ref|YP_003097613.1| ribosomal protein S3 [Dendrocalamus latiflorus] gi|255040297|gb|ACT99957.1| ribosomal protein S3 [Dendrocalamus latiflorus] Length = 239 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|118430340|ref|YP_874775.1| ribosomal protein S3 [Agrostis stolonifera] gi|125987745|sp|A1EA47|RR3_AGRST RecName: Full=30S ribosomal protein S3, chloroplastic gi|118201249|gb|ABK79618.1| ribosomal protein S3 [Agrostis stolonifera] Length = 239 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEIHSVNQRLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|240047265|ref|YP_002960653.1| 30S ribosomal protein S3 [Mycoplasma conjunctivae HRC/581] gi|239984837|emb|CAT04827.1| 30S ribosomal protein S3 [Mycoplasma conjunctivae] Length = 226 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 141/228 (61%), Gaps = 6/228 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ N+ WFA + + + L ED+KI + + ++ +A I R Sbjct: 1 MGQKVNPNGFRYGITKEHNAFWFAEKATFASKLLEDVKIHRFFEKKTREYQIANTAIRRD 60 Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116 N I+V++A+ G +G+ G ++++I ++L + I++ V EV PE+NA LI Sbjct: 61 RQNNITIVVHTAKLGQFLGQGGQNLKQIIEELKKHLRNKKANINIDVVEVKTPELNAKLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+SIA +LE R FR A K A+++AM+ GA GVK SGRLNG +++R+E Y EG + L Sbjct: 121 AESIAIKLENRGSFRIAQKFAIRTAMKAGAKGVKTKVSGRLNGVDMARSEGYSEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 TLR ++DY TA A T YG+ GIKV++SL + ++ S + ++ R + Sbjct: 181 TLRQNVDYATATARTTYGALGIKVWISLGE--FNNKSDVKSSPKRKGK 226 >gi|290790807|gb|ADD63064.1| ribosomal protein S3 [Potamophila parviflora] Length = 239 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMESDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P +++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFIDEE 239 >gi|31075927|gb|AAP42408.1| ribosomal protein S3 [Potato witches'-broom phytoplasma] gi|31075930|gb|AAP42410.1| ribosomal protein S3 [Potato witches'-broom phytoplasma] gi|121511569|gb|ABM55274.1| ribosomal protein S3 [Candidatus Phytoplasma trifolii] gi|121511572|gb|ABM55276.1| ribosomal protein S3 [Potato witches'-broom phytoplasma] gi|121511578|gb|ABM55280.1| ribosomal protein S3 [Brinjal little leaf phytoplasma] Length = 250 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ GLI G + + K+ N+ +I +++ EV A L+ Sbjct: 61 KKSNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|121511587|gb|ABM55286.1| ribosomal protein S3 [Candidatus Phytoplasma fraxini] Length = 253 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + AL+ ED +IR ++ H + +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYGEHKQVPALIVEDFRIRNLIKNHYPKVTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+ + GL+ G++ + + +K+ + N ++ ++V EV A L+ Sbjct: 61 KKSNDEFVEIELYTCKIGLVQGQENKNKINLIQKIEKLINKKVQINVFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K A+Q A+R G G+K+I +GRL GAE +R E G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVQKNAMQKALRSGVKGIKIIITGRLGGAEKARQESVAMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|218672112|ref|ZP_03521781.1| 30S ribosomal protein S3 [Rhizobium etli GR56] Length = 190 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 114/173 (65%), Positives = 143/173 (82%), Gaps = 3/173 (1%) Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 ++IER HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++AT Sbjct: 1 MVIERPHKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDAT 60 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 L+AQSIAQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVP Sbjct: 61 LVAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVP 120 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 L TLRA IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+ Sbjct: 121 LHTLRADIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 170 >gi|170784733|ref|YP_001718649.1| ribosomal protein S3 [Trachelium caeruleum] gi|156598789|gb|ABU85648.1| ribosomal protein S3 [Trachelium caeruleum] gi|157267481|gb|ABV26474.1| ribosomal protein S3 [Trachelium caeruleum] Length = 232 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 25/232 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA------K 54 MGQKINP+ RLG + +S WFA+ Y L ED KIR Y++ ++++ + + Sbjct: 1 MGQKINPLGLRLGTTQSHHSLWFAKPKNYSKELQEDEKIRYYIKNYVEKNMTSSVRALIR 60 Query: 55 ILIERTHKNCRIIVY-SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV---------- 103 I IE+ + +Y P + K K + + ++ Sbjct: 61 IEIEKAVDVTTMKIYIVPAPAEVFNKHYRRESKNLQPNLQKKFASVNQKFDLKTRKLIYV 120 Query: 104 --------NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++ +P + ++A+ I+ QL++R+ FR+AMK+A++ A + G++V +G Sbjct: 121 IPKFNLTLIKIFEPYRHPNILAEFISDQLQQRIPFRKAMKKAIELAKQANTKGIRVQIAG 180 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 R+ G E++R E +GRVPLQT++A IDY T YG GIK+++ + E Sbjct: 181 RIGGKEIARVEWIRDGRVPLQTIQAKIDYCCYPVRTIYGVLGIKIWIFIEGE 232 >gi|121511584|gb|ABM55284.1| ribosomal protein S3 [Vinca virescence phytoplasma] gi|121511593|gb|ABM55290.1| ribosomal protein S3 [Catharanthus phyllody phytoplasma] Length = 250 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K I +Y+++ GLI G + + K+ N+ +I +++ EV A L+ Sbjct: 61 KKTNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|950059|emb|CAA83692.1| 30S ribosomal protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 233 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 3/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+ Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVV 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLEG VPL T Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 LR +IDY A T YG G+KV+++ + Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211 >gi|121511590|gb|ABM55288.1| ribosomal protein S3 [Candidatus Phytoplasma fraxini] Length = 253 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + AL+ ED +IR ++ H + +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYGEHKQVPALIVEDFRIRNLIKNHYSKVTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+ + GL+ G++ + + +K+ + N ++ ++V EV A L+ Sbjct: 61 KKSNDEFVEIELYTCKIGLVQGQENKNKINLIQKIEKLINKKVQINVFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K A+Q A+R G G+K+I +GRL GAE +R E G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVQKNAMQKALRSGVKGIKIIITGRLGGAEKARQESVAMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|126680607|gb|ABO26530.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma] Length = 248 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+ Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T RA IDY A T YG G+K+++ + +S+ Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKIWIFHGEVLSNK 215 >gi|281412735|ref|YP_003346814.1| ribosomal protein S3 [Thermotoga naphthophila RKU-10] gi|281373838|gb|ADA67400.1| ribosomal protein S3 [Thermotoga naphthophila RKU-10] Length = 205 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 90/202 (44%), Positives = 138/202 (68%), Gaps = 2/202 (0%) Query: 6 NPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT-HKNC 64 +P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER + Sbjct: 2 HPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNKYYHAGISEIYVERPDAERI 60 Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124 I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+SIA ++ Sbjct: 61 NITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAESIASRI 120 Query: 125 ERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184 E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+A IDY Sbjct: 121 EKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLKAIIDY 180 Query: 185 GTAVAETAYGSCGIKVYVSLRD 206 GTA A T YG+ GIKV++ D Sbjct: 181 GTATAWTKYGTIGIKVWIYKGD 202 >gi|118430425|ref|YP_874691.1| ribosomal protein S3 [Hordeum vulgare subsp. vulgare] gi|152060535|sp|A1E9M9|RR3_HORVU RecName: Full=30S ribosomal protein S3, chloroplastic gi|118201079|gb|ABK79450.1| ribosomal protein S3 [Hordeum vulgare subsp. vulgare] Length = 239 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N ++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEINSVNQRFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R E GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLGGKEIARAESIKRGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|255631141|gb|ACU15936.1| unknown [Glycine max] Length = 206 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 11/206 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + Y + ED KIR+ ++ ++++ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENIQEDKKIRDCIKNYIQKNIRISSGVEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109 +I I++ ++I+Y P +I K IE+ +K N N ++++++ +V Sbjct: 61 GQIKIQKRIDLIQVIIYMGFPKFLIEGKSQKIEELQTNMQKKLNCVNRKLNIAIVKVANA 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + +IA+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E Sbjct: 121 YKHPNIIAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGS 195 EGRVPLQT+RA IDY T YG Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGV 206 >gi|14017610|ref|NP_114296.1| ribosomal protein S3 [Triticum aestivum] gi|27734484|sp|Q95H49|RR3_WHEAT RecName: Full=30S ribosomal protein S3, chloroplastic gi|13928243|dbj|BAB47072.1| ribosomal protein S3 [Triticum aestivum] Length = 239 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N ++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEINSVNQRFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R E +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLGGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|40253570|dbj|BAD05516.1| ribosomal protein S3 [Oryza sativa Japonica Group] Length = 239 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++ + IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILVEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|253729593|ref|YP_003029777.1| ribosomal protein S3 [Bambusa oldhamii] gi|246367103|gb|ACS94714.1| ribosomal protein S3 [Bambusa oldhamii] Length = 239 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++++ +V +P +++A+ IA +L+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPSILAEYIAFKLKNRVSFRKAMKKAIELTQKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFIDEE 239 >gi|121511575|gb|ABM55278.1| ribosomal protein S3 [Lucerne virescence phytoplasma] Length = 250 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ GLI G + + K+ N+ +I +++ EV A L+ Sbjct: 61 KKSNDKVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K AVQ A+R G G+K+I GRL GAE +R E G VPL Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIIKGRLGGAEKARQESISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|194033185|ref|YP_002000524.1| ribosomal protein S3 [Brachypodium distachyon] gi|193075593|gb|ACF08676.1| ribosomal protein S3 [Brachypodium distachyon] Length = 239 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKK-GTDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGVIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++S+ +V +P ++A+ IA QL+ RV FR+A+K+A++ + G Sbjct: 121 QKEINSVNQRLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAIKKAIELTKKADIRG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|115391939|ref|YP_778528.1| ribosomal protein S3 [Jasminum nudiflorum] gi|122164935|sp|Q06R93|RR3_JASNU RecName: Full=30S ribosomal protein S3, chloroplastic gi|110456260|gb|ABG74665.1| ribosomal protein S3 [Jasminum nudiflorum] Length = 221 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 14/221 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50 MGQKINP+ FRLG +S W ++ Y L ED IR+++Q ++++ Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWISQPKNYSKGLKEDQNIRDFIQNYIQKNMRISSRDRVE 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK----KLSNMTNSEIHLSVNEV 106 G+A+I I++T +II++ P +K + K + K + ++ +++ ++ Sbjct: 61 GIARIEIKKTIDLIQIIIFMGFPIENRPRKVKEKIKELQIHLEKEFHYVKKKLKIAITKI 120 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 KP N ++A+ +A QL+ RV FR+AMK+A++ A + +G++V +GR+NG +++R E Sbjct: 121 AKPYQNPKILAEFLAGQLKDRVSFRKAMKKAIELAEQADTEGIRVQMAGRINGKDIARVE 180 Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GR+PLQT+R IDY T YG GIK+++ + ++ Sbjct: 181 WIRRGRLPLQTIRTKIDYCCYTIRTIYGVLGIKIWIFIDEK 221 >gi|295311783|ref|YP_003587504.1| ribosomal protein S3 [Oncidium Gower Ramsey] gi|254833160|gb|ACT83163.1| ribosomal protein S3 [Oncidium Gower Ramsey] Length = 218 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 125/218 (57%), Gaps = 11/218 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG + +S WFA+ + + ED IR ++ ++K+ G+ Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAKPKNFSMGIQEDEIIRNCIKDYVKKNNKISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 A I I++ +II+ P +I + +++ +K + N +++++ + KP Sbjct: 61 AHIGIQKRIDLIQIIISIGFPNFLIEGRTRGVEELQMNVQKEFHSVNRRLNIAITRIEKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 ++A+ IA QL+ RV FR+A+K+A++ + G G++V +GR++G E++R E Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAIKKAIELTEQTGTKGIQVQIAGRIDGKEIARVEWIR 180 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 EGRVPLQT+RA ID+ + T YG GIK+++ L E Sbjct: 181 EGRVPLQTIRAKIDHCSHTIRTIYGVLGIKIWIFLNQE 218 >gi|44215|emb|CAA29710.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 233 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 130/211 (61%), Gaps = 3/211 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117 K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +TL+A Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDARSTLVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLE VPL T Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLECSVPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 LR +IDY A T YG G+KV+++ + Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211 >gi|229915462|gb|ACQ90807.1| ribosomal protein S3 [Oocystis solitaria] Length = 225 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 20/225 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ FRLG+ S+WF + +Y L ED +R+ + +A + +I ++R Sbjct: 1 MGQKVNPLGFRLGITQKHKSQWFMKVPQYSQLSVEDFFLRKIISNKFLEAKITEITVQRK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------------------MTNSEIH 100 RI + +A I G+ G+ +++ +K+L + ++ Sbjct: 61 LDQIRIEIQAAETQFITGRDGSQLDEFKKELEKELRTFRKNNFYFYKNIFSESIEKPQLS 120 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 L V + P A +A+ + +++++R FRRA+K+ +Q A + G+K+ SGRLNGA Sbjct: 121 LHVIKKSNPNFEAAFLAEFLVEEIQKRTPFRRAIKQTIQLAQKAKVKGIKIQISGRLNGA 180 Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 E++RTE +GRVPLQTLRA IDY A+T YG GIK++V Sbjct: 181 EIARTEWVRQGRVPLQTLRATIDYSYRTAKTIYGIIGIKIWVFKG 225 >gi|54020076|ref|YP_115707.1| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 232] gi|161611222|ref|YP_278986.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae J] gi|61215438|sp|Q601K8|RS3_MYCH2 RecName: Full=30S ribosomal protein S3 gi|152060879|sp|Q4AAE6|RS3_MYCHJ RecName: Full=30S ribosomal protein S3 gi|53987249|gb|AAV27450.1| 30s ribosomal protein S3 [Mycoplasma hyopneumoniae 232] gi|144227502|gb|AAZ44275.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae J] Length = 227 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+ Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLR +++Y TA+A+T YG G+KV+VSL + +D + Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKTDIDAIIRADKR 226 >gi|312601080|gb|ADQ90335.1| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 168] Length = 227 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+ Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLR +++Y TA+A+T YG G+KV+VSL + +D + Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKTDIDSIIRADKR 226 >gi|161611229|ref|YP_287585.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 7448] gi|152060878|sp|Q4A8H7|RS3_MYCH7 RecName: Full=30S ribosomal protein S3 gi|144575313|gb|AAZ53562.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 7448] Length = 227 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60 Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116 N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+ Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 TLR +++Y TA+A+T YG G+KV+VSL + +D + Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKNDIDAIIRADKR 226 >gi|255321767|ref|ZP_05362922.1| ribosomal protein S3 [Campylobacter showae RM3277] gi|255301247|gb|EET80509.1| ribosomal protein S3 [Campylobacter showae RM3277] Length = 205 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 134/196 (68%) Query: 30 GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK 89 + ED KIR +L+ L AGV++ILIERT K R+ V +ARPG+IIGKKG+D+EK+++ Sbjct: 2 AENIGEDYKIRAFLKKKLYYAGVSQILIERTAKKIRVTVVAARPGIIIGKKGSDVEKLKE 61 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 + + N E+++++ E K + +A L A+++A QLE+RV FRRAMK+ +Q A + GA G+ Sbjct: 62 DIQKLINKEVNVNIKEERKAQASAQLAAENVAMQLEKRVAFRRAMKKVIQGAQKSGAKGI 121 Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 K+ +GRL GAE++RTE YLEGRVPL TLRA IDYG A A T YG+ GIKV++ + + Sbjct: 122 KISVAGRLGGAEIARTEWYLEGRVPLHTLRAKIDYGVAEAHTTYGNIGIKVWIFKGEVLQ 181 Query: 210 DSDSTIPAAEHRVVEK 225 E + +K Sbjct: 182 KGVQPEKNEEEKADKK 197 >gi|197131498|gb|ACH47267.1| ribosomal protein S3 [Geranium carolinianum] Length = 232 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 122/231 (52%), Gaps = 24/231 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WF + Y L ED KIR+ ++ ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSIWFEKPKNYCKSLQEDQKIRDRIKNYIDNHRVSYGTKQRI 60 Query: 52 -----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNS 97 +++I IE+ ++I+Y P +I K I++ +K+ + N Sbjct: 61 LDIDIEIETDYISRIQIEKVRDFVQVIIYMGLPTFLIEGKPHKIKELKGDVEKVLHCGNR 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGR 156 ++ +S++++ P ++ ++A +A QL+ RV FR+AMK+ ++ A + G G+KV +GR Sbjct: 121 KLTISISKIGNPFVDPNILAAILAHQLKNRVSFRKAMKKTIEVAEKKGFAKGIKVQLAGR 180 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 + G E++ E +GRV LQT+R ID+ + T +G GIK++V + Sbjct: 181 IEGREMAGVEWLRKGRVSLQTIRTKIDFCSTTVRTIHGVLGIKIWVFANGK 231 >gi|119953273|ref|YP_945482.1| 30S ribosomal protein S3 [Borrelia turicatae 91E135] gi|254764514|sp|A1QZS0|RS3_BORT9 RecName: Full=30S ribosomal protein S3 gi|119862044|gb|AAX17812.1| SSU ribosomal protein S3P [Borrelia turicatae 91E135] Length = 276 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 5/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+ +N W S+W+ Y +LHED IR LK IE Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFLKGIRFDISDIEII 60 Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 N + +I+ + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A Sbjct: 61 RNNLQRVTVIISTPRPGSVIGVKGANLEKIGQLLTRKISKKINIKIKEIKKPEFDAQIVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE R +R+ +K ++ S++ G GVK+ SGRL GAE++R+ EGR+PL T Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGVQGVKIKVSGRLGGAEIARSFEVKEGRIPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVEKDS 227 LRA+IDYG A A+T YG G+KV++ + + + + S Sbjct: 181 LRANIDYGFAEAQTTYGVIGVKVWLFKGEVLGKQTNSDAGQVINKKTSREKS 232 >gi|121511581|gb|ABM55282.1| ribosomal protein S3 [Illinois elm yellows phytoplasma] Length = 250 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ GLI G + + K+ + +I +++ EV A L+ Sbjct: 61 KKSNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIEKLIKKKIQINIFEVKAVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|187918350|ref|YP_001883913.1| 30S ribosomal protein S3 [Borrelia hermsii DAH] gi|226697668|sp|B2S0I7|RS3_BORHD RecName: Full=30S ribosomal protein S3 gi|119861198|gb|AAX16993.1| SSU ribosomal protein S3P [Borrelia hermsii DAH] Length = 276 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 5/232 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+ +N W S+W+ Y +LHED IR K IE Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFFKGIRFDISDIEII 60 Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 N + ++V + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A Sbjct: 61 RNNLQRVTVVVSTPRPGSVIGVKGANLEKIGQLLTRKISKKINIKIKEIKKPEFDAQIVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE R +R+ +K ++ S++ G GVK+ SGRL GAE++R+ EGRVPL T Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGVQGVKIKVSGRLGGAEIARSFEVKEGRVPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVEKDS 227 LRA+IDYG A A+T YG G+KV++ + + + + S Sbjct: 181 LRANIDYGFAEAQTTYGVIGVKVWLFKGEVLGKQTNSDAGQVINRKSSREKS 232 >gi|225550883|ref|ZP_03771832.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225380037|gb|EEH02399.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 257 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R G+N W SRW + L ED KIR+YL K AG+ + IER Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117 + + VY+ + GL+IG + ++ + I ++ + + + L V EV PE+ A+L+A Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IA +E RV FR A K ++ ++ GA G+K SGRL G E++R E Y +G + L T Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA IDY A T YG G+KV+++ + + Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFGNK 214 >gi|290790874|gb|ADD63130.1| ribosomal protein S3 [Microlaena stipoides] Length = 239 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 32/239 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEINSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 VKV +GRL EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKVKIAGRLAXXXXXXAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|284006157|emb|CBA71399.1| 30S ribosomal protein S3 [Arsenophonus nasoniae] Length = 194 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 94/193 (48%), Positives = 133/193 (68%), Gaps = 8/193 (4%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 + L +A +++I+IER K+ R+ +++ARPG++IGKKG D+EK+RK ++++ ++ Sbjct: 1 MNKELAKASISRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKIVADIAGVPAQIN 60 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 + EV KPE++A L+A SIA QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE+ Sbjct: 61 IAEVRKPELDAKLVADSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 120 Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS--------DSDST 214 +RTE Y EGRVPL TLRA IDY TA A T YG G+KV++ + + + + Sbjct: 121 ARTEWYREGRVPLHTLRADIDYNTAEAHTTYGVLGVKVWIFKGEILGGMAAVEQVEKPTV 180 Query: 215 IPAAEHRVVEKDS 227 P + R K+S Sbjct: 181 QPKKQQRKGRKES 193 >gi|13507910|ref|NP_109859.1| 30S ribosomal protein S3 [Mycoplasma pneumoniae M129] gi|2507322|sp|P41205|RS3_MYCPN RecName: Full=30S ribosomal protein S3 gi|1674365|gb|AAB96308.1| ribosomal protein S3 [Mycoplasma pneumoniae M129] gi|301633309|gb|ADK86863.1| ribosomal protein S3 [Mycoplasma pneumoniae FH] Length = 273 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 84/234 (35%), Positives = 137/234 (58%), Gaps = 7/234 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+N R G+N W SRW A ++ L ED KIR + + A V+ + IER Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIA 117 T + VY+A+P +IG + +I+KI K++ + + L++NE+ P ++A +IA Sbjct: 61 TQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + +A +E RV R AM++++ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL T Sbjct: 121 RDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA----AEHRVVEKDS 227 LRA IDY A+T YG G+KV+++ + + PA + + + + Sbjct: 181 LRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKKQPNRQN 234 >gi|13357797|ref|NP_078071.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762418|ref|YP_001752320.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920204|ref|ZP_02691213.2| ribosomal protein S3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171920752|ref|ZP_02931956.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|183508764|ref|ZP_02690051.2| ribosomal protein S3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|185179052|ref|ZP_02555336.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|186701910|ref|ZP_02554273.2| ribosomal protein S3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|188024278|ref|ZP_02570143.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518681|ref|ZP_02557141.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524435|ref|ZP_02558251.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867628|ref|ZP_03079630.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273729|ref|ZP_03206264.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554200|ref|YP_002284636.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551476|ref|ZP_03772422.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|27734541|sp|Q9PQQ4|RS3_UREPA RecName: Full=30S ribosomal protein S3 gi|189045344|sp|B1AIM6|RS3_UREP2 RecName: Full=30S ribosomal protein S3 gi|226697773|sp|B5ZB46|RS3_UREU1 RecName: Full=30S ribosomal protein S3 gi|11275283|pir||F82915 ribosomal protein S3 UU237 [imported] - Ureaplasma urealyticum gi|6899207|gb|AAF30646.1|AE002122_15 ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827995|gb|ACA33257.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902588|gb|EDT48877.1| ribosomal protein S3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171903502|gb|EDT49791.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|182675701|gb|EDT87606.1| ribosomal protein S3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|184209037|gb|EDU06080.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|186700646|gb|EDU18928.1| ribosomal protein S3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|188018947|gb|EDU56987.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997748|gb|EDU66845.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659631|gb|EDX53011.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660685|gb|EDX53940.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249757|gb|EDY74538.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541701|gb|ACI59930.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379291|gb|EEH01656.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 257 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R G+N W SRW + L ED KIR+YL K AG+ + IER Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117 + + VY+ + GL+IG + ++ + I ++ + + + L V EV PE+ A+L+A Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IA +E RV FR A K ++ ++ GA G+K SGRL G E++R E Y +G + L T Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA IDY A T YG G+KV+++ + + Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFGNK 214 >gi|295137042|ref|YP_003587589.1| ribosomal protein S3 [Pisum sativum] gi|293338614|gb|ADE43587.1| ribosomal protein S3 [Pisum sativum] Length = 225 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 119/223 (53%), Gaps = 18/223 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQKI+P+ FRLG + +S WFA+ Y + ED IR + ++ Sbjct: 1 MGQKIHPLGFRLGATQSHDSIWFAQPIIYSKNIKEDKMIRYCIVHYILNTINGSLEFDVD 60 Query: 50 ---AGVAKILIERTHKNCRIIVYSARPGLIIGK----KGTDIEKIRKKLSNMTNSEIHLS 102 G+ +I I++ ++I+Y P L+ + + +++ +K N N +I L Sbjct: 61 ISGYGIGRIKIQKRIDRIKVIIYMGLPNLLKEEVKAQRIEELKTHVQKKVNCVNRKIKLG 120 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 + ++ + ++AQ IAQ L R+ FR+AM++ ++ + GV++ +GR++G E+ Sbjct: 121 ITKIANIYRDPHILAQFIAQLLLNRISFRKAMQKGIELVEQADTKGVQIQIAGRIDGKEI 180 Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +R E EGRVPLQT+RA IDY + T +G GIK+++ L Sbjct: 181 ARVEWIREGRVPLQTIRAKIDYCSYPVVTIWGVFGIKIWIFLN 223 >gi|197131500|gb|ACH47268.1| ribosomal protein S3 [Geranium macrorrhizum] Length = 230 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 122/229 (53%), Gaps = 22/229 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MG+ INP+ FRLG +S WF + +Y L ED KIR+ ++ ++ Sbjct: 1 MGRTINPLGFRLGTTQNHHSIWFEQPKKYCQGLQEDAKIRDRVKNYIDNHRVPRIFSRTY 60 Query: 52 ----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSE 98 +++I IE+ +I+Y P +I K + I++ +K+ + N E Sbjct: 61 FISRIEIPDCISRIEIEKGKGFVNVIIYMGFPRFLIEGKPSKIKELEVDVEKVLHCGNRE 120 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + +S+ E+ P + ++A+ + QL+ RV FR+AMK+ ++ A + A G+KV +GR++ Sbjct: 121 LTISIREIGNPYRDPNILAEFLTDQLKNRVSFRKAMKKTIELAEKAYAKGIKVQIAGRID 180 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 G E++ E +GRVPLQT+R I++ + T +G GIK++V E Sbjct: 181 GKEMACVEWLRKGRVPLQTIRTKINFCSTTVRTIHGVLGIKIWVFTNRE 229 >gi|290487102|gb|ADD29935.1| ribosomal protein S3 [Phoradendron serotinum] Length = 222 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 122/222 (54%), Gaps = 15/222 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA-------GVA 53 MG+KINP+ FRL S WFA+ Y L ED KIR+ +Q G+A Sbjct: 1 MGKKINPLGFRLDTTHDHYSVWFAQAKNYSQGLQEDKKIRDSIQYVKNNMNISSSGVGIA 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG------TDIEKIRKKLSNMTNSEIHLSVNEVP 107 I I++ ++ +Y + ++G ++E KK + N ++++++ + Sbjct: 61 HINIQKRIDLVQVNIYMGFTTKFLVREGSRLRIIDNLEMTIKKQLSYVNRKVNIAITRIA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG--ADGVKVIASGRLNGAELSRT 165 KP + ++A IA+QL+ RV FR+AMK+A++ + G+++ +GR++G E++R Sbjct: 121 KPYGDPNILAAFIAEQLKNRVSFRKAMKKAIELTEQQAGTNKGIQIQIAGRMDGKEIARV 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 E EG+VPLQ++RA I+YG+ T YG GIK+++ +E Sbjct: 181 EWIREGKVPLQSIRAKINYGSYPIRTLYGLLGIKIWIFTEEE 222 >gi|197131508|gb|ACH47272.1| ribosomal protein S3 [Pelargonium cotyledonis] Length = 218 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 15/218 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53 MGQKINP+ FRLG T +S WF +Y L ED KIRE+++ ++++ ++ Sbjct: 1 MGQKINPLGFRLGTTQTHHSIWFEERKDYSEGLQEDHKIREHIKNYIEKERISSGTDVIS 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIE------KIRKKLSNMTNSEIHLSVNEVP 107 +I I++ ++I+Y L+ + + ++K + + N +++++V ++ Sbjct: 61 RIQIDKRIDVVKVIIYMGFSNLLTEDEPPKTKIKELQVSLKKAIHFIHNRKLNIAVRKMK 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA--ELSRT 165 KP + T++ + IA QL+ RV FR+AMK+AV+ + G++V +G + G E++R Sbjct: 121 KPYGDPTILGEFIADQLKNRVSFRKAMKKAVELVEKEYKKGIQVQIAGCIGGKAQEMARV 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 E +GRVPLQT+ A I +G+ T +G GIKV++ Sbjct: 181 EWLRKGRVPLQTVTAKIHFGSTQVLTIHGVLGIKVWIF 218 >gi|12045010|ref|NP_072820.1| 30S ribosomal protein S3 [Mycoplasma genitalium G37] gi|255660305|ref|ZP_05405714.1| 30S ribosomal protein S3 [Mycoplasma genitalium G37] gi|1350991|sp|P47403|RS3_MYCGE RecName: Full=30S ribosomal protein S3 gi|3844751|gb|AAC71375.1| ribosomal protein S3 [Mycoplasma genitalium G37] gi|166078850|gb|ABY79468.1| ribosomal protein S3 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 268 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEY-GALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+N R G+N W SRW A ++ L +D KIR + + A V+ + IER Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTASSNQQTATWLVQDEKIRNLFFINYRNAQVSNVEIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN--EVPKPEINATLIA 117 T + VY+A+P L+IG + +I+KI K + + +I L + E+ P +++ +IA Sbjct: 61 TQTTVDVYVYAAQPALLIGSENKNIQKITKMIQIIVGRKIKLDLTINEIGSPMLSSRIIA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + IA +E RV R AM++A+ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL T Sbjct: 121 RDIANAIENRVPLRSAMRQALTKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LRA IDY A+T YG G+KV+++ Sbjct: 181 LRADIDYAFEKAKTTYGIIGVKVWINRG 208 >gi|31075915|gb|AAP42399.1| ribosomal protein S3 [Cherry lethal yellows phytoplasma] Length = 250 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|309322141|ref|YP_003934056.1| ribosomal protein S3 [Geranium palmatum] gi|197131502|gb|ACH47269.1| ribosomal protein S3 [Geranium palmatum] gi|300069234|gb|ADJ66355.1| ribosomal protein S3 [Geranium palmatum] Length = 230 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 22/229 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MG+ INP+ FRLG +S WF + +Y L ED KIR+ ++ ++ Sbjct: 1 MGRTINPLGFRLGTTQNHHSIWFEQPKKYCQGLQEDAKIRDRIKNYINNHRVPRIFSRTY 60 Query: 52 ----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSE 98 +++I IE+ +I+Y P +I K + I++ KK+ + N E Sbjct: 61 LISRIEIPDCISRIEIEKGKGFVNVIIYMGFPRFLIEGKPSKIKELKLDVKKVLHCGNRE 120 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + +S+ E+ P + ++A+ +A QL+ RV FR+AMK+ ++ A + A G+KV +GR++ Sbjct: 121 LTISIREIVNPYSDPNILAEFLADQLKNRVSFRKAMKKTIELAEKAYAKGIKVQIAGRID 180 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 G E++ + +GRVPLQT+ I + + T +G GIK++V E Sbjct: 181 GKEMACVKWLRKGRVPLQTICTKIHFCSTTVRTIHGVLGIKIWVFTNRE 229 >gi|323388309|gb|ADX60454.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|33242927|gb|AAQ01168.1| ribosomal protein S3 [Peach yellows phytoplasma] Length = 250 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|295065766|ref|YP_003587706.1| ribosomal protein S3 [Anomochloa marantoidea] gi|251765290|gb|ACT15444.1| ribosomal protein S3 [Anomochloa marantoidea] Length = 237 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 30/237 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 M QKINP+ FRLG +S WFA+ Y L ED KIR ++ +++ Sbjct: 1 MAQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIENYIQIQKNRKKIQKNE 60 Query: 52 --------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKK 90 + I I++ +I++ P L+ K ++EK +K Sbjct: 61 KKASNKKSNRKIDAGSSSEVITHIEIQKEIDMIHVIIHIGFPHLLKKKGAIEELEKNLQK 120 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150 N N +H+++ +V P ++A+ IA QL+ RV FR+AMK+AV+ + GVK Sbjct: 121 EVNSVNQRLHIAIEKVKNPYRQPNILAEYIAFQLKNRVAFRKAMKKAVELTKKADTKGVK 180 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 V +GRL G E++R EC +G +PLQT+RA IDY T YG G+K+++ + +E Sbjct: 181 VKIAGRLGGQEIARAECTQKGPLPLQTIRAKIDYCCYPIRTIYGVLGLKIWLFVDEE 237 >gi|202070812|gb|ACH95359.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|202070788|gb|ACH95341.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075919|gb|AAP42402.1| ribosomal protein S3 [Peach yellows phytoplasma] gi|31075923|gb|AAP42405.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|33242931|gb|AAQ01171.1| ribosomal protein S3 [Nectarine yellows phytoplasma] gi|117169119|gb|ABK32517.1| ribosomal protein S3 [Hemp fiber witches'-broom phytoplasma] gi|151413289|gb|ABS11145.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070784|gb|ACH95338.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070792|gb|ACH95344.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070796|gb|ACH95347.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070800|gb|ACH95350.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070804|gb|ACH95353.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070808|gb|ACH95356.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|202070816|gb|ACH95362.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|229484942|gb|ACQ73425.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|269979215|gb|ACZ56123.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] gi|296280786|gb|ADH04688.1| ribosomal protein S3 [Japanese raisin witches'-broom phytoplasma] gi|300390821|gb|ADK11105.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|202070820|gb|ACH95365.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|290487104|gb|ADD29936.1| ribosomal protein S3 [Rhododendron simsii] Length = 216 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 13/216 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQKINP+ FRLG +S WF + Y L ED IR+Y++ +++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSCWFEQPKNYSEGLIEDQNIRDYIEDFVQENIQKNRRIASS 60 Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE-KIRKKLSNMTNSEIHLSVNEVP 107 +G+ +I I + + + A P L+ +++ ++KK+ + N +I+++ + Sbjct: 61 LSGITRIKILKGTDLTEVQISLAFPKLLKEIPMEELQTNLQKKIDCLLNRKINIATTTIA 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KP N ++AQ IA QLE RV FR+AMKRA+ A + G++V +GRL G +++R E Sbjct: 121 KPYRNPIILAQYIAGQLEHRVPFRKAMKRAIAKAKKEKIKGIRVQIAGRLGGRDIARVEW 180 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +GRVPLQT+RA IDY + T YG GIK+++ Sbjct: 181 IRKGRVPLQTIRAKIDYCSYPVRTIYGVLGIKIWIF 216 >gi|94502240|ref|ZP_01308726.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833825|ref|YP_001598021.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri GWSS] gi|172048396|sp|A8Z674|RS3_SULMW RecName: Full=30S ribosomal protein S3 gi|94451211|gb|EAT14150.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206315|gb|ABS30625.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri GWSS] Length = 226 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 138/212 (65%), Gaps = 3/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+N + RLG+ W S W++ Y + ED KIR+YL+ L +A +++I IER+ Sbjct: 1 MGHKVNTLSNRLGLIVGWQSLWYSH---YPERIKEDFKIRKYLENRLSKANISRIYIERS 57 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + S+RP +IIGK G++I+K++K+L+ +I +++ E+ KPE++A L+++SI Sbjct: 58 LNRVIITISSSRPSIIIGKGGSEIDKLKKELNIFIYKKIQINIFEIKKPELDAVLVSKSI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R +++A+K + +A++ A+G+K+ SGRLNGAE++R E Y EGR+PL T RA Sbjct: 118 ASQLENRGSYKKAIKICISAALQVNAEGIKIKISGRLNGAEMARKETYKEGRIPLSTFRA 177 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T YG GIKV++ + + Sbjct: 178 DIDYHMTEAHTNYGIIGIKVWIMKGEIYGKKN 209 >gi|309322213|ref|YP_003934291.1| ribosomal protein S3 [Monsonia speciosa] gi|197131504|gb|ACH47270.1| ribosomal protein S3 [Monsonia speciosa] gi|300069306|gb|ADJ66426.1| ribosomal protein S3 [Monsonia speciosa] Length = 266 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 55/263 (20%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA------- 53 MGQKINP+ FRLG +S WF + Y L ED KIR+ ++ ++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFEKPKNYCESLKEDKKIRDRIKNYIDNRRSGPMKDLIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKK--------------------------------- 80 +I IE+ ++I+Y L +G K Sbjct: 61 RIQIEKGMDLIKVIIYMGFQELFMGDKPAKTKKGKRKRGQKGKKEGEPRHIKELRVRELK 120 Query: 81 ---------------GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125 G + K LS N ++ + + + P + ++A+ +A QL+ Sbjct: 121 VNVAKALHLNLSGNRGLKKLNVEKGLSQSGNRQLKVVIRNISNPYGDPNILAEFLADQLK 180 Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 R+ FR+AMKR ++ A GVKV +GRL G +++R EC L+GRVPL T+RA ID+ Sbjct: 181 NRISFRKAMKRVIELAKEANTKGVKVQIAGRLGGRDIARVECLLQGRVPLHTIRAKIDFC 240 Query: 186 TAVAETAYGSCGIKVYVSLRDEV 208 + + YG GIK+++ EV Sbjct: 241 STRVQMLYGVLGIKIWIFSDTEV 263 >gi|115531946|ref|YP_784101.1| ribosomal protein S3 [Pelargonium x hortorum] gi|115532000|ref|YP_784155.1| ribosomal protein S3 [Pelargonium x hortorum] gi|122164242|sp|Q06FM6|RR3_PELHO RecName: Full=30S ribosomal protein S3, chloroplastic gi|112382100|gb|ABI17293.1| ribosomal protein S3 [Pelargonium x hortorum] gi|112382154|gb|ABI17347.1| ribosomal protein S3 [Pelargonium x hortorum] Length = 218 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 124/218 (56%), Gaps = 15/218 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53 MGQKINP+ FRLG T +S WF + +Y L ED KIRE++Q ++++ ++ Sbjct: 1 MGQKINPLGFRLGTTQTHHSIWFEKRKDYSEGLQEDHKIREHIQNYIEKERISSDSDVIS 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIE------KIRKKLSNMTNSEIHLSVNEVP 107 +I I+++ ++I+Y L+ + + ++K + + N +++L+V ++ Sbjct: 61 RIQIDKSIDVVKVIIYMGFSQLLTEDEPPKTKIKELQVSLKKAIHFIQNRKLNLAVRKMK 120 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA--ELSRT 165 KP + T++ + IA QL+ RV FR+ MK+AV+ + G++V +G + G E++R Sbjct: 121 KPYGDPTILGKYIANQLKNRVSFRKVMKKAVELVEKAYKKGIQVQIAGCIGGKAQEMARV 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 E +GRVPLQT+ A ID+ + T G GIKV++ Sbjct: 181 EWLRKGRVPLQTVTAKIDFCSTQVITIRGVLGIKVWIF 218 >gi|317134113|ref|YP_004123456.1| ribosomal protein S3 [Rhizanthella gardneri] gi|255985044|gb|ACU46591.1| ribosomal protein S3 [Rhizanthella gardneri] Length = 216 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 10/213 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 MGQKINP+ FRLG+ S WFA+ + L ED +IR + +++ G+ Sbjct: 1 MGQKINPLGFRLGITQIHYSFWFAKPKYFSMGLQEDERIRRCIHNYVQNKKKISSGFEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGK--KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 A + I++ ++++Y P L+ E++++ + + ++ + ++ KP Sbjct: 61 AYMRIQKKIDLIQVMIYIGFPNLLREGLLSTWIGEELQRNVQKKFHRIFNIVIIKIEKPY 120 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A+ IA Q + RV R+ MK+ ++ + G++V +GR++G E++R E E Sbjct: 121 AQPNILAEYIALQFKNRVSVRKIMKKVIELTEQTDTKGIQVQIAGRIDGKEIARVEWIRE 180 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GRVPLQT+ A IDY + T YG+ GIK+++ Sbjct: 181 GRVPLQTICAKIDYCSYTIRTIYGNLGIKIWIF 213 >gi|203284394|ref|YP_002222134.1| 30S ribosomal protein S3 [Borrelia duttonii Ly] gi|203287928|ref|YP_002222943.1| 30S ribosomal protein S3 [Borrelia recurrentis A1] gi|226697667|sp|B5RM42|RS3_BORDL RecName: Full=30S ribosomal protein S3 gi|226697670|sp|B5RPI8|RS3_BORRA RecName: Full=30S ribosomal protein S3 gi|201083837|gb|ACH93428.1| 30S ribosomal protein S3 [Borrelia duttonii Ly] gi|201085148|gb|ACH94722.1| 30S ribosomal protein S3 [Borrelia recurrentis A1] Length = 276 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P R+ +N W S+W+ Y +LHED IR LK IE Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFLKGIKFDISDIEII 60 Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 N + +++ + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A Sbjct: 61 RNNLQRVTVVISTPRPGSVIGVKGANLEKIGQLLTRKVSKKINIKIKEIKKPEFDAQIVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 IA+QLE R +R+ +K ++ S++ G G+K+ SGRL GAE++R+ EGR+PL T Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGIQGIKIKVSGRLGGAEIARSFEVKEGRIPLHT 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 LRA+IDYG A A T YG G+KV++ + + Sbjct: 181 LRANIDYGFAEAYTTYGVIGVKVWLFKGEILGKQ 214 >gi|161511517|ref|NP_852839.2| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(low)] gi|3914904|sp|O52338|RS3_MYCGA RecName: Full=30S ribosomal protein S3 gi|2766509|gb|AAB95393.1| ribosomal protein S3 [Mycoplasma gallisepticum] gi|284811867|gb|AAP56407.2| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(low)] gi|284930300|gb|ADC30239.1| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(high)] gi|284931067|gb|ADC31005.1| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. F] Length = 263 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 78/230 (33%), Positives = 132/230 (57%), Gaps = 3/230 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+N R G+N W SRW A+ + G + +D KIR YL A ++ + IER Sbjct: 1 MGQKVNSNGLRFGINKNWQSRWVAKTNQQTGDWIVQDEKIRNYLFKKFHSAFISNVDIER 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117 T + R+ +Y+++PG+I+GK+ +I+ I ++ + + + V EV P ++A ++A Sbjct: 61 TQTSIRVFIYASQPGIILGKEAANIKVILLAINKIVGRHIKVDVDVLEVGNPSLSAKIVA 120 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177 + +A +E R R AM++A++ ++ GA G+KV+ SGRLNG E++R + Y+EG V L T Sbjct: 121 RELADAIENRTPLRTAMRQALKRVLKAGAKGIKVLVSGRLNGVEIARDKMYIEGNVTLST 180 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 LR IDY A+ +YG G+KV+++ + A + ++ Sbjct: 181 LRTDIDYALEEAQMSYGVIGVKVWINRGEIFGKDFYKKQAHIVKPKGSEA 230 >gi|27734513|sp|Q8VS61|RS3_ZIZJU RecName: Full=30S ribosomal protein S3 gi|18034033|gb|AAL57329.1|AF396941_1 ribosomal protein S3 [Candidatus Phytoplasma ziziphi] Length = 250 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRPLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|293977937|ref|YP_003543367.1| 30S ribosomal protein S3P [Candidatus Sulcia muelleri DMIN] gi|292667868|gb|ADE35503.1| SSU ribosomal protein S3P [Candidatus Sulcia muelleri DMIN] Length = 223 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 138/212 (65%), Gaps = 3/212 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K+N + RLG+ W S W++ Y + ED KIR+YL+ L +A +++I IER+ Sbjct: 1 MGHKVNTLSNRLGLIVGWQSLWYSH---YPERIKEDFKIRKYLENRLSKANISRIYIERS 57 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + S+RP +IIGK G++I+K++K+L+ +I +++ E+ KPE++A L+++SI Sbjct: 58 LNRVIITISSSRPSIIIGKGGSEIDKLKKELNIFIYKKIQINIFEIKKPELDAVLVSKSI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QLE R +++A+K + +A++ A+G+K+ SGRLNGAE++R E Y EGR+PL T RA Sbjct: 118 ASQLENRGSYKKAIKICISAALQVNAEGIKIKISGRLNGAEMARKETYKEGRIPLSTFRA 177 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 IDY A T YG GIKV++ + + Sbjct: 178 DIDYHMTEAHTNYGIIGIKVWIMKGEIYGKKN 209 >gi|260780676|ref|YP_003227050.1| 30S ribosomal protein S3 [Bryopsis hypnoides] gi|260176754|gb|ACX33763.1| 30S ribosomal protein S3 [Bryopsis hypnoides] Length = 243 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 33/237 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG + WFA+ Y + EDL IR++ + AG+ KI I R Sbjct: 1 MGQKIHPYGFRLGNFQKHQANWFAKKENYTQKIFEDLFIRDFFFQRFRDAGILKISINRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRK--------------------KLSNMTNSEI 99 N +I ++ +PG I K + I+K K S+++ + I Sbjct: 61 FNNHIQICIFLTKPGFFISSKNAQLTTIQKTLETAFLKYQSSNFFRLNFLKQSSLSKNNI 120 Query: 100 HLSVNEVPKPEINATLI------------AQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 + P++ L+ A + +QLE+R+ FRRA+K+ ++ + R Sbjct: 121 KSILEHQNTPKLTIQLMELVKIEQKAAFLADFLIEQLEKRIAFRRAVKKTLKRSERSKIQ 180 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G+K+ SGRLNGAE++RTE EGRVPLQTLRA+IDY A+T YG G+KV+V L Sbjct: 181 GIKIQISGRLNGAEIARTEWIREGRVPLQTLRANIDYTYKTAKTIYGILGVKVWVFL 237 >gi|331268146|ref|YP_004347795.1| ribosomal protein S3 [Chlorella variabilis] gi|325296323|gb|ADZ05043.1| ribosomal protein S3 [Chlorella variabilis] Length = 237 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 16/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P+ FRLG+ S W + + + +R YL AG+ I IER Sbjct: 1 MGQKVHPVGFRLGITQKHQSYWCTTPQKSALWIEDASFLRNYLNKTYVGAGITHIEIERR 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-------------TNSEIHLSVN 104 + I +Y+ARP L +G+ ++++R +L N + LS+ Sbjct: 61 DLDLPSLGIEIYAARPALFLGRDTKGLDRLRDELVNKLKAFYRKRNLSEPAKIHLSLSIK 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 + +P+ +A ++A+ + + LE+R FRRAM++ VQ A+R G G+KV SGRLNGA+++R Sbjct: 121 PLQEPDAHAAVLAEKLVEDLEQRKPFRRAMRQTVQRALRAGVKGIKVQVSGRLNGADIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 E EG VPLQTLRA +DY + A+T +G G+K++V + + Sbjct: 181 AEAVREGPVPLQTLRADVDYSSKSAKTIFGLLGVKIWVFRGERL 224 >gi|184133063|gb|ACC68134.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma] Length = 250 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAGLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|296399208|gb|ADH10383.1| ribosomal protein S3 [Selaginella moellendorffii] Length = 224 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 18/224 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------ 48 MG+K NP FRLG+ + W+AR + + ED K+R+ + ++ Sbjct: 1 MGRKTNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGD 60 Query: 49 --QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLS 102 G+ ++ I R + +++ P ++I G IE+ R K S+ +H++ Sbjct: 61 GGAEGIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHIT 120 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 +E+ +P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE+ Sbjct: 121 PSEISEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEI 180 Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 +R E EGRVPLQT RA IDY A T YG G KV + + Sbjct: 181 ARVEWAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 224 >gi|269101051|ref|YP_003289199.1| 30S ribosomal protein S3 [Ectocarpus siliculosus] gi|266631559|emb|CAV31230.1| Chloroplast 30S ribosomal protein S3 [Ectocarpus siliculosus] gi|270118689|emb|CAT18757.1| Chloroplast 30S ribosomal protein S3 [Ectocarpus siliculosus] Length = 222 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 9/220 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57 MG K +P+ FRLG+ S W++ + Y + L ED +IREY+ L V I Sbjct: 1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKL 60 Query: 58 ----ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEIN 112 + T K I + S PG I+GK G + K+ ++LS + N ++ +++ E+ KP Sbjct: 61 IIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTE 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEG 171 AT++ + ++LE RV FR ++ ++ G+K+ +GRLNGAE++RTE EG Sbjct: 121 ATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEWVREG 180 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 RVPLQTLRA+IDY A+T YG GIK+++ + ++ Sbjct: 181 RVPLQTLRANIDYSYKTAQTTYGILGIKIWLFKNEILTKK 220 >gi|221328716|gb|ACM17821.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma] Length = 237 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 T R+ IDY A+T +G G+KV+V + D I R Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225 >gi|126680601|gb|ABO26526.1| ribosomal protein S3 [Picris echioides phyllody phytoplasma] Length = 237 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 128/215 (59%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A + L++ED +IRE++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIREFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+++G + + K+ +++ + I++ V EV PE +LI Sbjct: 61 KKDNEENIEIFLHTPKTGVVVGSENKEKNKLNQEIYKLIKKNINIHVIEVKNPEKVTSLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K ++ A++ G G+K+I GRL+GAE++RTE +EG +PL Sbjct: 121 AQNIASQLQQRAFFRAVKKMHIRKALQAGVKGIKIILKGRLSGAEIARTETTIEGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 T R+ IDY A+T +G G+KV+V + Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKD 215 >gi|126680580|gb|ABO26512.1| ribosomal protein S3 [Sunn hemp witches'-broom phytoplasma] Length = 239 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 78/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+KV GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKVSLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 T R+ IDY A+T +G G+KV+V + D I R Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225 >gi|126680571|gb|ABO26506.1| ribosomal protein S3 [Alfalfa witches'-broom phytoplasma] gi|126680577|gb|ABO26510.1| ribosomal protein S3 [Tomato big bud phytoplasma (Australia)] gi|126680583|gb|ABO26514.1| ribosomal protein S3 [Peanut witches'-broom phytoplasma] gi|126680586|gb|ABO26516.1| ribosomal protein S3 [Sweet potato witches'-broom phytoplasma] gi|126680589|gb|ABO26518.1| ribosomal protein S3 [Sesame phyllody phytoplasma] gi|126680592|gb|ABO26520.1| ribosomal protein S3 [Sesame phyllody phytoplasma] gi|166919356|gb|ABZ04074.1| ribosomal protein S3 [Cleome witches'-broom phytoplasma] Length = 239 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 T R+ IDY A+T +G G+KV+V + D I R Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225 >gi|126680595|gb|ABO26522.1| ribosomal protein S3 [Cleome phyllody phytoplasma] gi|187236188|gb|ACD02031.1| ribosomal protein S3 [Crotalaria witches'-broom phytoplasma] Length = 239 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVEKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 T R+ IDY A+T +G G+KV+V + D I R Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225 >gi|254798682|ref|YP_003058311.1| ribosomal protein S3 [Parachlorella kessleri] gi|229915630|gb|ACQ90973.1| ribosomal protein S3 [Parachlorella kessleri] Length = 230 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 16/226 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P+ FRLG+ S W + + + +R ++Q + AG+ I I R Sbjct: 1 MGQKVHPLGFRLGITQKHQSYWCTKPRISAIWVDDASLLRRFIQKNYTGAGITNIEIHRR 60 Query: 60 --THKNCRIIVYSARPGLIIGK-------------KGTDIEKIRKKLSNMTNSEIHLSVN 104 + + I +Y+ARP L G+ K ++ L + N I L + Sbjct: 61 ELDYSSIAIKIYAARPALFSGRDLKSLDSLRDQLLKKLKAFYRKRNLPDPGNINISLYIK 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 V +P+ A ++A+ + + L++R +RRAM++ +Q A+R G G+KV SGRLNGA+++R Sbjct: 121 PVKEPDSFAAVLAEKLVEDLQQRKPYRRAMRQVIQKAIRAGVKGIKVQISGRLNGADIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 +E EG VPLQTLRA IDY + A+T +G G+K++V + ++ Sbjct: 181 SEELREGPVPLQTLRADIDYSSKSAKTIFGLLGVKIWVFHGERLNP 226 >gi|126680574|gb|ABO26508.1| ribosomal protein S3 [Tomato big bud phytoplasma (Grape A)] Length = 239 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 75/225 (33%), Positives = 128/225 (56%), Gaps = 4/225 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57 MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIPRL 60 Query: 58 -ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + +N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 T R+ IDY A+T +G G+KV+V + D I R Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225 >gi|91178045|gb|ABE27282.1| ribosomal protein S3 [cotton phyllosphere bacterium F] Length = 161 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 80/160 (50%), Positives = 110/160 (68%), Gaps = 4/160 (2%) Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128 ++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+AQQLERRV Sbjct: 2 HTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRV 61 Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 +FRRAMKRAVQ+A R GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA IDY Sbjct: 62 MFRRAMKRAVQNATRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYANYE 121 Query: 189 AETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224 A T YG G+KV++ + + PA + + Sbjct: 122 AHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 161 >gi|219877930|gb|ACL50614.1| ribosomal protein S3 [Chrysanthemum flattened stem Phytoplasma] Length = 250 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK N RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNXNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|298500586|ref|ZP_07010390.1| SSU ribosomal protein S3 [Vibrio cholerae MAK 757] gi|297540755|gb|EFH76812.1| SSU ribosomal protein S3 [Vibrio cholerae MAK 757] Length = 168 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 81/159 (50%), Positives = 113/159 (71%) Query: 66 IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125 + +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SIA QLE Sbjct: 1 MTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSIASQLE 60 Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 RRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA IDY Sbjct: 61 RRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRADIDYA 120 Query: 186 TAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 T+ A T YG G+KV++ + + + AAE + + Sbjct: 121 TSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 159 >gi|302824567|ref|XP_002993926.1| hypothetical protein SELMODRAFT_137759 [Selaginella moellendorffii] gi|300138293|gb|EFJ05067.1| hypothetical protein SELMODRAFT_137759 [Selaginella moellendorffii] Length = 224 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 18/223 (8%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------- 48 G+K NP FRLG+ + W+AR + + ED K+R+ + ++ Sbjct: 2 GRKTNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGDG 61 Query: 49 -QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLSV 103 G+ ++ I R + +++ P ++I G IE+ R K S+ +H++ Sbjct: 62 GAEGIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHITP 121 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +E+ +P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE++ Sbjct: 122 SEISEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEIA 181 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 R E EGRVPLQT RA IDY A T YG G KV + + Sbjct: 182 RVEWAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 224 >gi|126680598|gb|ABO26524.1| ribosomal protein S3 [Italian alfalfa witches'-broom phytoplasma] Length = 240 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 129/223 (57%), Gaps = 4/223 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W+S W+A+ + L++ED IR+++ + +A++ I+R Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAKDKKVPLLINEDYLIRKFINNYYPLGTIARVEIQRL 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G++IG + K+ +++ + I + V EV PE A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLTQEIYKLIKKNITIHVIEVKNPEKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 T R+ IDY A+T +G G+KV+V + + + + Sbjct: 181 TFRSKIDYAYIAAKTIHGVLGVKVWVCDGNYSPKKEIRESSKQ 223 >gi|156598636|gb|ABU85574.1| ribosomal protein S3 [Scaevola aemula] Length = 235 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 30/233 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINPI FRLG +S WF Y L +D KIR Y++ ++++ Sbjct: 1 MGQKINPIGFRLGTTQDHHSLWFEEPKNYSEGLQQDQKIRNYIKNYIQENMKISKDLGWK 60 Query: 52 -VAKILIERTHKNCRIIVYSARPGLIIGKKG-----------TDIEKIRKKLSNMTNSEI 99 + I I++ +I Y + K+ +I K++ L + Sbjct: 61 VITCIEIQKAINLIHVITYIGFSNKVREKQPGKKKKLAKQEKEEITKLQINLHKEFHFID 120 Query: 100 HLSVNEVP---------KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150 L+ N + P N T++A +A QL+ RV FR+AMK+ ++ + + G G++ Sbjct: 121 RLTCNTIKFNLTIKVFKNPFKNPTILAAYLADQLKNRVSFRKAMKKTIELSQKAGTKGIQ 180 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 V +GR+ G E++R C+ +GR+PLQT+RA IDY + +T YG GIK++ Sbjct: 181 VKIAGRIGGKEIARVVCFKKGRLPLQTIRAKIDYCSYPVQTTYGVLGIKIWTF 233 >gi|306417114|emb|CBW48261.1| 30S ribosomal protein S3 [Hemp dogbane yellows phytoplasma] Length = 237 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIRRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + + + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINNIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|126643090|ref|YP_001086074.1| 30S ribosomal protein S3 [Acinetobacter baumannii ATCC 17978] Length = 200 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 1/176 (0%) Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 V+ ILIER ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+ Sbjct: 1 MVSNILIERPSGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPD 60 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A L+A++IA QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y E Sbjct: 61 LDARLVAEAIASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYRE 120 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225 GRVPL TLRA IDY T AET YG+ G+KV++ + + PA K Sbjct: 121 GRVPLHTLRADIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 176 >gi|7524928|ref|NP_045930.1| ribosomal protein S3 [Chlorella vulgaris] gi|3024554|sp|P56365|RR3_CHLVU RecName: Full=30S ribosomal protein S3, chloroplastic gi|2224522|dbj|BAA58006.1| 30S ribosomal protein S3 [Chlorella vulgaris] Length = 231 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 16/224 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG+ S W + + + +R +++ AG+ I I+R Sbjct: 1 MGQKVHPIGFRLGITQKHRSYWCTTPQKSALWIQDASFLRNFIKKKYIGAGITHIEIQRQ 60 Query: 61 ---HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-------------EIHLSVN 104 + I +Y+AR I G +E+++++L + LSV Sbjct: 61 DVDSPSLGIQIYAARLRQIAGNDSKGLERLQEELVKQLQIFYRKRNLVEPGTIHLRLSVK 120 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 + PE A ++A+ + ++LE+R FRRAM++ VQ A+R G G+KV SGRLNGA+++R Sbjct: 121 PLRAPEAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKGIKVQISGRLNGADIAR 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 +E EG VPLQTLRA IDY + A+T +G GIK++V + + Sbjct: 181 SEDVREGPVPLQTLRADIDYSSKPAKTIFGLLGIKIWVFRGERL 224 >gi|124494212|gb|ABN13155.1| ribosomal protein S3 [Soybean phyllody phytoplasma] Length = 238 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R+ IDY A+T +G G+KV+V Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209 >gi|84028332|gb|ABC49685.1| ribosomal protein S3 [Coyol palm decline phytoplasma] gi|84028336|gb|ABC49688.1| ribosomal protein S3 [Coconut decline phytoplasma] gi|84028343|gb|ABC49693.1| ribosomal protein S3 [Carludovica palmata leaf yellowing phytoplasma] gi|117622258|gb|ABK51375.1| ribosomal protein S3 [Texas Phoenix palm phytoplasma] gi|117622262|gb|ABK51378.1| ribosomal protein S3 [Texas Phoenix palm phytoplasma] gi|213389863|gb|ACJ45991.1| ribosomal protein S3 [Florida sabal palm phytoplasma] Length = 231 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++KI+I+R Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYTKGIISKIVIKRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 N I +Y+++ GL+ + + + KKL + + +++ EV E A L+ Sbjct: 61 KKSNIDNIEIDLYTSKIGLVQSAEKKEKNVLIKKLEQLIKKKFNVNFFEVKSSEKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+R FR K + ++ GA+GVK+ SGRL GAE++R E G VPL Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKRVLKSGAEGVKITISGRLGGAEIARRESISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 T + IDYG + A T +G G++V ++ + + + + +E + Sbjct: 181 TFKCDIDYGFSEAHTTFGVLGVQVLINNGIKKTPTLKINNNIKQTDLENKN 231 >gi|306417111|emb|CBW48259.1| 30S ribosomal protein S3 [Spartium witches'-broom phytoplasma SI04-S4] Length = 235 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|124494218|gb|ABN13159.1| ribosomal protein S3 [Crotalaria phyllody phytoplasma] Length = 238 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G+ IG + K+ +++ + I+++V EV P+ A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVXIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R+ IDY A+T +G G+KV+V Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209 >gi|33306250|gb|AAQ02798.1|AF385627_2 ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 250 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|124494206|gb|ABN13151.1| ribosomal protein S3 [Cotton phyllody phytoplasma] Length = 238 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 123/209 (58%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G++IG + K+ +++ + I++ V EV P+ A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKTKLVQEIYKLIKKNINIHVIEVKNPDKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLGGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R+ IDY A+T +G G+KV+V Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209 >gi|124494215|gb|ABN13157.1| ribosomal protein S3 [Faba bean phyllody phytoplasma] Length = 238 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I R Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIPRF 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R+ IDY A+T +G G+KV+V Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209 >gi|31075895|gb|AAP42384.1| ribosomal protein S3 [Hemp dogbane yellows phytoplasma] Length = 250 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIRRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + + + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINNIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|27734509|sp|Q8VL42|RS3_FLADO RecName: Full=30S ribosomal protein S3 gi|18034031|gb|AAL57328.1|AF396940_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034037|gb|AAL57331.1|AF396943_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034047|gb|AAL57336.1|AF396948_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034053|gb|AAL57339.1|AF396951_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|31075855|gb|AAP42354.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|86755783|gb|ABD15118.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|86755785|gb|ABD15119.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|149797930|gb|ABR31810.1| ribosomal protein S3 variant rpV-Esv1 [Candidatus Phytoplasma vitis] gi|149797936|gb|ABR31813.1| ribosomal protein S3 variant rpV-Esv6 [Candidatus Phytoplasma vitis] gi|149797938|gb|ABR31814.1| ribosomal protein S3 variant rpV-Esv7 [Candidatus Phytoplasma vitis] Length = 250 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|311033948|gb|ADP55400.1| ribosomal protein S3 [Rubus stunt phytoplasma] Length = 250 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ ++++ I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQVEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075887|gb|AAP42378.1| ribosomal protein S3 [Candidatus Phytoplasma spartii] gi|31075891|gb|AAP42381.1| ribosomal protein S3 [Candidatus Phytoplasma spartii] Length = 248 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|27734512|sp|Q8VS60|RS3_RUBST RecName: Full=30S ribosomal protein S3 gi|18034039|gb|AAL57332.1|AF396944_1 ribosomal protein S3 [Rubus stunt phytoplasma] gi|31075871|gb|AAP42366.1| ribosomal protein S3 [Rubus stunt phytoplasma] gi|31075879|gb|AAP42372.1| ribosomal protein S3 [Rubus stunt phytoplasma] Length = 250 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|187940268|gb|ACD39364.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|187940271|gb|ACD39366.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|308523693|gb|ADO33679.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|308523696|gb|ADO33681.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|308523699|gb|ADO33683.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] Length = 250 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|18034043|gb|AAL57334.1|AF396946_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034045|gb|AAL57335.1|AF396947_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034051|gb|AAL57338.1|AF396950_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|31075859|gb|AAP42357.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|148299197|gb|ABQ58108.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|148299200|gb|ABQ58110.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 250 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|159506774|gb|ABW97703.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] Length = 250 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKTNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISTGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075847|gb|AAP42348.1| ribosomal protein S3 [Alder yellows phytoplasma] Length = 250 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINILEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISIGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075875|gb|AAP42369.1| ribosomal protein S3 [Rubus stunt phytoplasma] Length = 250 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE ++ + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKAKRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|18034029|gb|AAL57327.1|AF396939_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 250 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|27734514|sp|Q8VS63|RS3_ALDYE RecName: Full=30S ribosomal protein S3 gi|18034023|gb|AAL57324.1|AF396936_1 ribosomal protein S3 [Alder yellows phytoplasma] gi|31075863|gb|AAP42360.1| ribosomal protein S3 [Alder yellows phytoplasma] gi|31075867|gb|AAP42363.1| ribosomal protein S3 [Alder yellows phytoplasma] Length = 250 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNNYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAIQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|18034025|gb|AAL57325.1|AF396937_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034035|gb|AAL57330.1|AF396942_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|18034041|gb|AAL57333.1|AF396945_1 ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|86755787|gb|ABD15120.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|149797942|gb|ABR31816.1| ribosomal protein S3 variant rpV-Gsv1 [Candidatus Phytoplasma vitis] Length = 250 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075851|gb|AAP42351.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 250 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|224472887|gb|ABR31811.2| ribosomal protein S3 variant rpV-Esv2 [Candidatus Phytoplasma vitis] Length = 250 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 ARNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|31075907|gb|AAP42393.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] Length = 250 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRNSISMGIVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGGVLPNK 215 >gi|309322075|ref|YP_003933892.1| ribosomal protein S3 [Erodium texanum] gi|197131496|gb|ACH47266.1| ribosomal protein S3 [Erodium texanum] gi|300069168|gb|ADJ66290.1| ribosomal protein S3 [Erodium texanum] Length = 242 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 38/242 (15%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG S WF + +Y L ED KIR+ + ++ Sbjct: 1 MGQKINPLGFRLGTTQNHYSIWFKQPKKYCEGLQEDQKIRDCITNYIDNQRVSRVDAMTD 60 Query: 52 -VAKILIERTHKNCRIIVYSARPGLIIGKKGT-------------------------DIE 85 +++I IE+ ++ +Y +P + K +++ Sbjct: 61 CISRIQIEKGIDGVKVTIYMGKPQFLTEDKPPKSKELKGKKSQKEKKRKELNETRIKELK 120 Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF- 144 +K+ + N ++ +S+ ++ KP + +IA+ +A QL+ R+ FR+AM++ ++ A Sbjct: 121 GNVEKVLHCENQKLKISIRKIRKPYGDPKIIAEFLANQLKSRISFRKAMQKTIELAADKE 180 Query: 145 --GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 A G++V +GR+ G E++R E +GRV LQT+R I + + T +G GIK++V Sbjct: 181 EGCAKGIQVQIAGRIEGKEIARVEWLRKGRVSLQTIRTKIHFCSTTVRTIHGVLGIKIWV 240 Query: 203 SL 204 S Sbjct: 241 SK 242 >gi|269991351|emb|CAX12535.1| 30S ribosomal protein S3 [Fucus vesiculosus] Length = 222 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 9/220 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57 MG K +P+ FRLG T S W+++ + Y LL +D IREY++ L V I Sbjct: 1 MGHKTHPLGFRLGGLQTDRSLWYSKTNSYIYLLKDDYAIREYIRTFLFLNQVGYSGITKI 60 Query: 58 ----ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEIN 112 + T K + + S PG IIGK G ++++ +KL ++ ++ +++ EV +P Sbjct: 61 IIKSDETRKKIYVEIQSVVPGRIIGKSGLLLKELDEKLQSLIKDKKVLINIIEVEQPYQE 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEG 171 A+++ + ++LE RV +R+ ++ +Q G G+K+ +GRLNGAE++RTE EG Sbjct: 121 ASILVDILVKKLEERVAYRKCVREILQRYRTEEGLKGIKIQIAGRLNGAEIARTEWVREG 180 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 RVPLQTLRA IDY A+T YG GIK+++ + ++ Sbjct: 181 RVPLQTLRADIDYSYKTAQTTYGILGIKLWLFKNEVLTKK 220 >gi|61236192|sp|P0A4C1|RS3_ELMPH RecName: Full=30S ribosomal protein S3 gi|61236196|sp|P0A4C2|RS3_ELYEP RecName: Full=30S ribosomal protein S3 gi|18034027|gb|AAL57326.1|AF396938_1 ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|18034049|gb|AAL57337.1|AF396949_1 ribosomal protein S3 [Elm witches'-broom phytoplasma] gi|31075899|gb|AAP42387.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|31075903|gb|AAP42390.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|31075911|gb|AAP42396.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|308523702|gb|ADO33685.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] Length = 250 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRNSISMGIVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|83265571|gb|ABB97539.1| ribosomal protein S3 [Palm lethal yellowing phytoplasma] gi|124494182|gb|ABN13137.1| ribosomal protein S3 [Lethal yellowing phytoplasma] gi|126680604|gb|ABO26528.1| ribosomal protein S3 [Coconut lethal yellowing phytoplasma] Length = 230 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 N I +Y+++ G++ + + + KKL + + +++ EV + A L+ Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+R FR K + ++ GA GVK+I SGRL GAE++R E G VPL Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLVGAEIARRESISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TL+ IDYG + A T +G G++V ++ Sbjct: 181 TLKCDIDYGFSEAHTTFGVLGVQVLINNG 209 >gi|209528353|ref|ZP_03276804.1| ribosomal protein S3 [Arthrospira maxima CS-328] gi|209491206|gb|EDZ91610.1| ribosomal protein S3 [Arthrospira maxima CS-328] Length = 199 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 81/180 (45%), Positives = 118/180 (65%), Gaps = 2/180 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+PI FRLGV SRWFA S+Y LL ED IR+Y+Q +L AG++ + IER Sbjct: 1 MGQKIHPIGFRLGVTQEHKSRWFADASQYPQLLQEDHTIRKYIQKNLSNAGISDVRIERK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118 + V +ARPG+++G+ G I+ +R+ L +N +I ++V EV + + +ATLIA+ Sbjct: 61 ADQIDLEVLTARPGVVVGRGGAGIDSLRQGLQKELGSNRQIRINVVEVSRVDADATLIAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 +IA QLE+RV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE E P Sbjct: 121 NIAAQLEKRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREVVFPYTPY 180 >gi|31075883|gb|AAP42375.1| ribosomal protein S3 [Rubus stunt phytoplasma] Length = 250 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSIFMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|124494185|gb|ABN13139.1| ribosomal protein S3 [Lethal yellowing phytoplasma] Length = 230 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 N I +Y+++ G++ + + + KKL + + +++ EV + A L+ Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+R FR K + ++ GA GVK+I SGRL GAE++R E G VPL Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLGGAEIARRESISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TL+ IDYG A T +G G++V ++ Sbjct: 181 TLKCDIDYGFPEAHTTFGVLGVQVLINNG 209 >gi|124494209|gb|ABN13153.1| ribosomal protein S3 [Lime witches'-broom phytoplasma] Length = 239 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60 Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R+ IDY A+T +G G+KV+V Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209 >gi|255961335|ref|YP_003097517.1| ribosomal protein S3 [Selaginella moellendorffii] gi|254941507|gb|ACT89022.1| ribosomal protein S3 [Selaginella moellendorffii] Length = 220 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 18/220 (8%) Query: 5 INPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--------------QA 50 NP FRLG+ + W+AR + + ED K+R+ + ++ Sbjct: 1 TNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGDGGAE 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLSVNEV 106 G+ ++ I R + +++ P ++I G IE+ R K S+ +H++ +E+ Sbjct: 61 GIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHITPSEI 120 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 +P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE++R E Sbjct: 121 SEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEIARVE 180 Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 EGRVPLQT RA IDY A T YG G KV + + Sbjct: 181 WAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 220 >gi|149797934|gb|ABR31812.1| ribosomal protein S3 variant rpV-Esv5 [Candidatus Phytoplasma vitis] gi|224472890|gb|ABR31815.2| ribosomal protein S3 variant rpV-Esv8 [Candidatus Phytoplasma vitis] Length = 250 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGSRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G+KV ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215 >gi|84028339|gb|ABC49690.1| ribosomal protein S3 [Coconut lethal yellowing phytoplasma] Length = 230 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 4/209 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60 Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 N I +Y+++ G++ + + + KKL + + +++ EV + A L+ Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 AQ+IA QLE+R FR K + ++ GA GVK+I SGRL G E++R E G VPL Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLVGPEIARRESISLGLVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TL+ IDYG + A T +G G++V ++ Sbjct: 181 TLKCDIDYGFSEAHTTFGVLGVQVLINNG 209 >gi|148645066|gb|ABR01058.1| RpsC [uncultured Geobacter sp.] Length = 163 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 87/163 (53%), Positives = 127/163 (77%), Gaps = 1/163 (0%) Query: 9 LFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIV 68 FRLGV TW+S+W+A ++Y LLHEDL IR++L+ L +GV+KI IE C+I + Sbjct: 2 GFRLGVTKTWDSKWYAE-ADYAKLLHEDLAIRKFLKKRLYSSGVSKIEIEXAANKCKINI 60 Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128 ++ARPGLIIGKKG+++ I+K+L+ +T+ EI +++NEV KPE++A L+A+++A QLERR+ Sbjct: 61 FTARPGLIIGKKGSEVXTIKKELALITSKEIFITINEVRKPELDAQLVAENVALQLERRI 120 Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EG Sbjct: 121 AFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREG 163 >gi|213496084|gb|ACJ49190.1| ribosomal protein S3 [uncultured Geobacter sp.] Length = 155 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 85/155 (54%), Positives = 122/155 (78%) Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108 +GV+KI IER +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV K Sbjct: 1 HSGVSKIEIERAAGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRK 60 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 PE++A L+A+++A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y Sbjct: 61 PELDAQLVAENVALQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWY 120 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPL TLRA IDYG A A+T YG G+KV + Sbjct: 121 REGRVPLHTLRADIDYGFAEAKTTYGIIGVKVLLF 155 >gi|156598489|gb|ABU85503.1| ribosomal protein S3 [Passiflora biflora] Length = 232 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 29/232 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 M QKINP+ FR+G +S WF + Y L ED +IR +Q ++++ G+ Sbjct: 1 MAQKINPLGFRVGTTQNHHSLWFEQPKNYSQGLQEDKRIRNCIQNYVQKNIKFPSGIEGI 60 Query: 53 AKILIERTHKNCRIIVYSA---------------RPGLIIGKKGTDIEKIRKKLSNMTN- 96 ++I I++ ++I+ + +I + IE++ + N Sbjct: 61 SRIEIQKGIDLIQVIIVMGFLKLEKRQSKKIAELQKKVIKELETNGIEELWMIVQKEMNP 120 Query: 97 -----SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 ++++ + + KP + ++A+ IA+QL+ RV F +AMK+A++ A R G+KV Sbjct: 121 ISLSYRKLNIKIRRIRKPYKDPIILAKFIAEQLKNRVAFPKAMKKAIELAKRAHTKGIKV 180 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL G + +R GRVPLQT+RA I+Y + +T YG GIK++V Sbjct: 181 QISGRLGGKDKARVAWIRAGRVPLQTVRAKINYCSYTVQTIYGVLGIKIWVF 232 >gi|149797944|gb|ABR31817.1| ribosomal protein S3 variant rpV-Gsv3 [Candidatus Phytoplasma vitis] Length = 250 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGVIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A++IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL Sbjct: 121 ARNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 TLRA IDY A T YG G++V ++ + + + Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVRVIINYGEVLPNK 215 >gi|213496086|gb|ACJ49191.1| ribosomal protein S3 [uncultured Geobacter sp.] Length = 155 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 85/155 (54%), Positives = 122/155 (78%) Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108 +GV+KI IER +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV K Sbjct: 1 HSGVSKIEIERAAGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRK 60 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 PE++A L+A+++A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y Sbjct: 61 PELDAQLVAENVAMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWY 120 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPL TLRA IDYG A A+T YG G+KV + Sbjct: 121 REGRVPLHTLRADIDYGFAEAKTTYGIIGVKVLLF 155 >gi|294807321|ref|ZP_06766134.1| ribosomal protein S3 [Bacteroides xylanisolvens SD CC 1b] gi|294445486|gb|EFG14140.1| ribosomal protein S3 [Bacteroides xylanisolvens SD CC 1b] Length = 212 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 82/188 (43%), Positives = 128/188 (68%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93 ED KIR+YL L +A V++I+IERT K I V +ARPG+IIGK G +++K++++L Sbjct: 2 LEDSKIRKYLNARLAKASVSRIVIERTLKLVTITVCTARPGIIIGKGGQEVDKLKEELKK 61 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 +T+ +I +++ EV +PE++A ++A +IA+Q+E ++ +RRA+K A+ + MR GA+G+K+ Sbjct: 62 VTDKDIQINIFEVKRPELDAVIVANNIARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQI 121 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 SGRLNGAE++R+E Y EGR PL T RA IDY A A T G GIKV++ + + Sbjct: 122 SGRLNGAEMARSEMYKEGRTPLHTFRADIDYCHAEALTKVGLLGIKVWICRGEVFGKKEL 181 Query: 214 TIPAAEHR 221 + + Sbjct: 182 APNFTQSK 189 >gi|295136915|ref|YP_003587748.1| ribosomal protein S3 [Lathyrus sativus] gi|293338637|gb|ADE43609.1| ribosomal protein S3 [Lathyrus sativus] Length = 226 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 120/225 (53%), Gaps = 20/225 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49 MGQKI+P++FRLG + S WFA+ Y + ED IR + +++ Sbjct: 1 MGQKIHPLVFRLGATQSHYSIWFAKPKMYSENVKEDKIIRYCINNFIQKTVPESCEFETD 60 Query: 50 ---AGVAKILIERTHKNCRIIVYSARPGLIIGK----KGTDIEKIRKKLSNMTNSEIHLS 102 G+ +I I++ ++I+Y P + K + ++ +K N E+ L Sbjct: 61 ISGYGMGRIKIQKRIDLIKVIIYMGLPDSLKEKVKDLRVEQLKTQVQKKVTCGNRELDLE 120 Query: 103 VNEVPKPEI--NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 + ++P P + +A ++A+ +++ L R+ FR+AM++ ++ A + GV++ +GR+ G Sbjct: 121 ITKLPSPYLYRDAKIVAEFLSELLRNRISFRKAMQKGIELAEQADTKGVQIKIAGRMEGK 180 Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 E++R E EGRVPLQT+RA +D+ + T +G G+K+++ Sbjct: 181 EIARVEWTREGRVPLQTIRAPMDFCSVPLVTLFGVFGVKIWIFQN 225 >gi|325989713|ref|YP_004249412.1| 30S ribosomal protein S3 [Mycoplasma suis KI3806] gi|323574798|emb|CBZ40458.1| 30S ribosomal protein S3 [Mycoplasma suis] Length = 241 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGA-LLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK NP RLG N W SRW A ++ A + ED KIR++L + +A+I I+R Sbjct: 1 MGQKSNPNCVRLGFNKNWLSRWNAPDRKHAALWILEDEKIRKFLNKECRDGILAQIEIDR 60 Query: 60 THKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS--VNEVPKPEINAT 114 + + + + G K+ + L +TN + ++ E+ P +++ Sbjct: 61 FINLQGVWTLSITLHLIEIGLYNHGETKNKLVRMLRRLTNKKWEINLIFLELKNPGVSSI 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 ++A + + LE R R MK+ ++ AM GA GVK+ SGR+NGA+++R E EG +P Sbjct: 121 VLANEVVELLEARTPLRMVMKKTIKKAMYSGARGVKIQVSGRINGADMARIESCTEGEIP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TLRA I+Y VA T YG G+KV+V+ Sbjct: 181 CSTLRADIEYCYRVARTTYGVLGVKVWVNRG 211 >gi|222084151|ref|YP_002519746.1| ribosomal protein S3 [Gnetum parvifolium] gi|149941462|dbj|BAF64898.1| ribosomal protein S3 [Gnetum parvifolium] gi|220983488|dbj|BAH11256.1| ribosomal protein S3 [Gnetum parvifolium] Length = 214 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 8/214 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54 MGQK+NP+ FRLGV S WFA+ +Y L ED+KI + ++ ++ G+A+ Sbjct: 1 MGQKVNPLGFRLGVTQKNYSVWFAQNRDYSKTLQEDVKINQNIEKFFQKQRKHSYLGIAQ 60 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I+R + +Y+ L+ +KG +++ ++ N ++++ V + KP N Sbjct: 61 IEIQRKVNLINVTIYTGFSSLLNNEKGEFSELKNKIRQSLGPINQKLNIKVGILSKPYQN 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A ++A+ IAQQLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GR Sbjct: 121 AKILAEYIAQQLEKRVAVKKILQKAVELAQKEDIEGIRIQVAGRLGGRERTRKAKIKIGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 V LQTLRA +DY T +G+ GI +++ +++ Sbjct: 181 VTLQTLRAEMDYCCYTVRTIHGTFGILLWIFMKE 214 >gi|228017212|gb|ACP52032.1| ribosomal protein S3 [Pinus leiophylla var. chihuahuana] Length = 217 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 114/214 (53%), Gaps = 12/214 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE--------YLQCHLKQAGV 52 M QKINP+ FRLGV S WFA+ Y L ED KIR +++ G+ Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTXXENYVRTHIKSSSNYGGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108 A++ P L+ I +G IEK+R + NM + ++H+++ +V K Sbjct: 61 ARVXXXXXXXXXXXXXXIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWX 180 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 QT+RA IDY +T YG GIK+++ Sbjct: 181 XXXXXXXQTIRARIDYCYYXVKTIYGVLGIKIWI 214 >gi|172072886|ref|YP_001806647.1| ribosomal protein S3 [Cryptomeria japonica] gi|171854905|dbj|BAG16645.1| ribosomal protein S3 [Cryptomeria japonica] gi|239794274|dbj|BAH73271.1| ribosomal protein S3 [Cryptomeria japonica] gi|239794356|dbj|BAH73352.1| ribosomal protein S3 [Cryptomeria japonica] Length = 230 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 28/230 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ---------AG 51 MG KINP+ FRLG S WF +Y L ED +I ++ +++ G Sbjct: 1 MGNKINPLGFRLGFTQNHCSLWF-EERDYSEDLREDERIYNCIENYVQHIKSSINSSYGG 59 Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTD----------IEKIRKKLSNM------- 94 + +I I + + + +Y A L I KKG + I+++RK++ NM Sbjct: 60 ITRIEILKQTELISVNIYIAFVDLFIEKKGQEKKKKKDDEQEIKQLRKEVQNMLVQSMLD 119 Query: 95 -TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 N ++ +S+ +V KP ++A+ IA QL+ RV R+ MK+A++ A + +G+K+ Sbjct: 120 SVNRKLVISIEKVEKPYREPKILAEYIALQLKERVEIRKIMKKAIELAEKADVEGIKIQI 179 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GRLNG E +R E ++GRVPLQTLRA IDY +T YG GIK+++ Sbjct: 180 KGRLNGIERARKESAMQGRVPLQTLRAKIDYCYYAVQTVYGVLGIKIWIF 229 >gi|325973278|ref|YP_004250342.1| 30S ribosomal protein S3 [Mycoplasma suis str. Illinois] gi|323651880|gb|ADX97962.1| 30S ribosomal protein S3 [Mycoplasma suis str. Illinois] Length = 241 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGA-LLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK NP RLG N W SRW + ++ A + ED KIR++L + +A+I I+R Sbjct: 1 MGQKSNPNCVRLGFNKNWLSRWNSPDRKHAALWILEDEKIRKFLNKECRDGILAQIEIDR 60 Query: 60 THKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS--VNEVPKPEINAT 114 + + + + G K+ + L +TN + ++ E+ P +++ Sbjct: 61 FINLQGVWTLSITLHLIEIGLYNHGETKNKLVRMLRRLTNKKWEINLIFLELKNPGVSSI 120 Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 ++A + + LE R R MK+ ++ AM GA GVK+ SGR+NGA+++R E EG +P Sbjct: 121 VLANEVVELLEARTPLRMVMKKTIKKAMYSGARGVKIQVSGRINGADMARIESCTEGEIP 180 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TLRA I+Y VA T YG G+KV+V+ Sbjct: 181 CSTLRADIEYCYRVARTTYGVLGVKVWVNRG 211 >gi|218176279|ref|YP_002364536.1| ribosomal protein S3 [Festuca arundinacea] gi|215882363|gb|ACJ70793.1| ribosomal protein S3 [Festuca arundinacea] Length = 239 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 34/240 (14%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAG-------- 51 MGQKINP+ FRLG N+ F R Y L ED KIR+ ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTPK-NTIPFGRTPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKL 59 Query: 52 -----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKI 87 + +I I++ +I++ P L+ K ++EK Sbjct: 60 ESDSSSEVITHNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKD 119 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 +K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 120 LQKEIHSVNQGLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIK 179 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 GVKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E Sbjct: 180 GVKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239 >gi|307128711|ref|YP_003880741.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri CARI] gi|306483173|gb|ADM90043.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri CARI] Length = 225 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 137/215 (63%), Gaps = 5/215 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58 MG K+N + RLG+ W S W + Y + ED KIR+Y++ L + +++I IE Sbjct: 1 MGHKVNTLSNRLGLIVGWQSIWCS---NYPDRIKEDFKIRKYIENRLPKPKIYISRIYIE 57 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118 RT I + ++RP +IIGK G +IEKI+K++ + T EI +++ E+ KPE++A L+++ Sbjct: 58 RTLNRINITISTSRPAIIIGKGGDEIEKIKKEIEHFTYKEIKINIFEIKKPELDAVLVSK 117 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 SIA++LE + +++++K + SA+R A+G+K+ SGRLNGAE++RTE Y EGR+PL T Sbjct: 118 SIARKLESKSSYKKSIKICISSALRLNAEGIKIKISGRLNGAEMARTETYKEGRIPLSTF 177 Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 RA IDY + T YG GIKV++ + Sbjct: 178 RADIDYYMTESHTDYGLIGIKVWIMKGEIYGKKKI 212 >gi|148645068|gb|ABR01059.1| RpsC [uncultured Geobacter sp.] Length = 163 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 85/164 (51%), Positives = 126/164 (76%), Gaps = 1/164 (0%) Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67 FRLGV TW+S+W+A ++Y LHED+ IR++L+ L +GV+KI IER +I Sbjct: 1 NGFRLGVIKTWDSKWYAE-ADYAKFLHEDMAIRKFLKKRLYNSGVSKIEIERAANKTKIN 59 Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 +++ARPGLIIGKKG+++E I+K+L+ +T+ EI + ++EV KPE++A L+A+++A QLERR Sbjct: 60 IHTARPGLIIGKKGSEVETIKKELAALTSKEIFIKIHEVRKPELDAQLVAENVALQLERR 119 Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 + FRR MK++V SA++FGA G+++ SGRL GAE+SRTE Y EG Sbjct: 120 IAFRRGMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREG 163 >gi|297242963|ref|ZP_06926901.1| ribosomal protein S3 [Gardnerella vaginalis AMD] gi|298253067|ref|ZP_06976859.1| ribosomal protein S3 [Gardnerella vaginalis 5-1] gi|296889174|gb|EFH27908.1| ribosomal protein S3 [Gardnerella vaginalis AMD] gi|297532462|gb|EFH71348.1| ribosomal protein S3 [Gardnerella vaginalis 5-1] Length = 226 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 84/177 (47%), Positives = 121/177 (68%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 + L++AGV++I+IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L+ Sbjct: 1 MSHDLERAGVSRIVIERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLN 60 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 + EV ++A L+AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+ Sbjct: 61 IFEVKNAALDAQLVAQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEM 120 Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 SR+E Y EGRVPLQTLRA IDYG A+T YG G+KV++ D A + Sbjct: 121 SRSEFYREGRVPLQTLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 177 >gi|67968328|dbj|BAE00228.1| ribosomal protein S3 [Selaginella uncinata] Length = 225 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 19/224 (8%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------- 48 G+K NP+ RLG+ + W AR Y + ED ++R+ ++ Sbjct: 2 GRKTNPLGSRLGIAKNHHPNWSARPRIYSQYVQEDKQVRDCTDAYVHGQRVWNPAGSGGN 61 Query: 49 --QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI----RKKLSNMTNSEIHLS 102 G+ +++I R + ++ P ++I G IE+ ++ LS+ +H++ Sbjct: 62 SGAEGIERVVIRRKTDLPSVETHAGPPAVLIRSHGRGIEQSRMNVQQNLSDSRIGRVHIA 121 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 E P A+ +A Q RV FRR K+A++ A + G G+K +GR NGAE+ Sbjct: 122 SAETSGPYGEPNTPAKYMASQPGNRVAFRRTTKKAIEPARKSGRKGIKTQIAGRPNGAEI 181 Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 +R E EGRVP QT RA IDY A+T YG G KV + Sbjct: 182 ARVEWAREGRVPPQTSRAQIDYRYYPAQTVYGVSGTKVRILRNG 225 >gi|323690439|gb|ADX99152.1| ribosomal protein S3 [Stachytarpheta cayennensis] Length = 195 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 112/193 (58%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGVEELQMNLQKEFHYVNRKLNIAITRIAKPYENPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ L E Sbjct: 181 VLGIKIWIFLDKE 193 >gi|298489090|ref|ZP_07007112.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156402|gb|EFH97500.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 148 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 4/145 (2%) Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 + K+R+ L+ +H+++ E+ KPE++ L+AQS+AQQLERRV+FRRAMKRAVQ+AMR Sbjct: 4 LRKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAVQNAMR 63 Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA IDY A T YG G+KV++ Sbjct: 64 IGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYANYEAHTTYGVIGVKVWIF 123 Query: 204 LRDEVSDS----DSTIPAAEHRVVE 224 + + PA + + Sbjct: 124 KGEVIGGRQEELKPQAPAPRKKAAK 148 >gi|323690415|gb|ADX99140.1| ribosomal protein S3 [Neosparton ephedroides] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690435|gb|ADX99150.1| ribosomal protein S3 [Parodianthus ilicifolius] Length = 195 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 +Y L ED KIR ++ ++++ G+A+I I++ ++I+ P L+I Sbjct: 1 PKDYPEGLQEDQKIRALIKNYVQKNRRTSPGAEGIARIEIQKRIDLIQVIILMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N +I++++ + P + ++A+ IA+QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKINIAITRIANPYGDPNILAEFIAEQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ A + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELAEQADTKGIQVQIAGRIDGKEIARVEWMREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|255017222|ref|ZP_05289348.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL F2-515] Length = 194 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/151 (42%), Positives = 105/151 (69%), Gaps = 1/151 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++I Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTKKRVHINIVEIKRADLDAKLVAENI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 A+QLE RV FRRA K+A+Q MR G K+ Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGQKVSKL 150 >gi|323690417|gb|ADX99141.1| ribosomal protein S3 [Lampayo castellani] Length = 195 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQINLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|321310974|ref|YP_004193303.1| 30S ribosomal protein S3 [Mycoplasma haemofelis str. Langford 1] gi|319802818|emb|CBY93464.1| ribosomal protein S3 [Mycoplasma haemofelis str. Langford 1] Length = 244 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 9/235 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK+NP R G+N W SRW + L ED K+R+ L+ ++AGVA I IER Sbjct: 1 MGQKVNPNSLRFGLNKNWVSRWNSPNRSMSIKWLLEDEKVRKVLKERCRKAGVALIEIER 60 Query: 60 THKNCR-----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEIN 112 I ++ A+PGLI+ ++ I K L + E+ + + E+ P ++ Sbjct: 61 FSNFGEKVTVFIYLHLAQPGLILSNDK-ELSLINKDLRIILGKSVEVKMDIKELKNPAVS 119 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 A +I Q + +E RV R +KR ++ AM GA GVKV SGR+NG E++R E Y +G Sbjct: 120 AEIIGQEVVDAIENRVPHRLVIKRLMKRAMMAGALGVKVKLSGRINGVEIARNEAYSDGS 179 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +PL TLRA IDY +A+ YG G+KV+V+ +P+A + DS Sbjct: 180 IPLSTLRADIDYSFQIAKRDYGVLGVKVWVNRGLYFGRYFMPLPSAAKAKSKGDS 234 >gi|197131506|gb|ACH47271.1| ribosomal protein S3 [Sarcocaulon vanderietiae] Length = 243 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 31/234 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 M +KINP+ FRLG N +S WF + Y L ED +IR+ ++ + Sbjct: 1 MARKINPLGFRLGTNQNHHSVWFEQPKNYCKGLQEDKRIRDCIKNFIDNRRKKSEPMKNL 60 Query: 52 VAKILIERTHKN----CRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------------- 93 + +I IE++ K +I++ L K +K + Sbjct: 61 ITRIQIEKSIKKQIHLTTVIIFMGFQELFEEKPKKRGKKEDELRHIKEFSELKVNVEKAL 120 Query: 94 ----MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 N E+ + ++++ P + ++A+ +A L+ R+ FR+AM+R ++ + + GV Sbjct: 121 DPNLRRNRELKVVISKIFNPFGDPNILAELLAHLLKTRIPFRKAMRRVIELSKKADIKGV 180 Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 KV +GR++G +++R EC L+GRVPL T+RA ID+ + + +G GIK+++ Sbjct: 181 KVQIAGRIDGRDIARVECLLQGRVPLHTIRAKIDFCSTRVQMRFGVLGIKIWIF 234 >gi|307069687|ref|YP_003878164.1| 30S ribosomal subunit protein S3 [Candidatus Zinderia insecticola CARI] gi|306482947|gb|ADM89818.1| 30S ribosomal subunit protein S3 [Candidatus Zinderia insecticola CARI] Length = 201 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 4/205 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI FRL +N W S W + + L D+ IR Y++ +L + + I+IE Sbjct: 1 MGQKINPICFRLSINKNWKSSWCSNKKNFSKFLKIDILIRSYIKNNLDKYLINDIIIEHY 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + +++ L K +IEK+ ++ + + ++ ++NA IA SI Sbjct: 61 NNKILTKIFTCSQKLF---KKNNIEKLESNINKNIFINKKIFLIKIKSSKLNAQYIANSI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + +L++R++FR+ MK+ + + G+K++ SGRLNG E++R E Y G+VPL L A Sbjct: 118 SLKLKKRILFRKIMKKYILK-LNNNIKGIKIMLSGRLNGIEIARKEWYSLGKVPLHKLSA 176 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +IDYG + A+T YG KV++ + Sbjct: 177 NIDYGFSEAKTNYGIISSKVWIYKK 201 >gi|323690427|gb|ADX99146.1| ribosomal protein S3 [Citharexylum ligustrinum] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 118/193 (61%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR++++ ++++ G+A+I I++ +II++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNTRTSSGAEGIARIKIQKRIDLIQIIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP + ++A+ IA+QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAIKRIAKPYGSPNILAEFIAEQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 KRA++ A + G++V +GRLNG E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KRAIELAKQADTKGIQVQMAGRLNGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + +E Sbjct: 181 VLGIKIWIFIDNE 193 >gi|323690399|gb|ADX99132.1| ribosomal protein S3 [Phyla lanceolata] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPQILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690409|gb|ADX99137.1| ribosomal protein S3 [Junellia juniperina] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESKPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690413|gb|ADX99139.1| ribosomal protein S3 [Dipyrena glaberrima] Length = 195 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690419|gb|ADX99142.1| ribosomal protein S3 [Diostea juncea] Length = 195 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWILIDKE 193 >gi|323690443|gb|ADX99154.1| ribosomal protein S3 [Recordia boliviana] Length = 193 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 116/191 (60%), Gaps = 11/191 (5%) Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 NYSEGLQEDQKIRDFIKNYVQKNMRTSSGTEGIARIEIQKRIDLIQVIIFMGFPRLLIES 60 Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + IE+++ +K + N ++++++ ++ KP N ++A+ IA QL+ RV FR+AMK+ Sbjct: 61 RPRGIEELQMNLQKEFHYVNRKLNIAITKIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180 Query: 197 GIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 GIKIWIFIDKE 191 >gi|240018144|gb|ACS44453.1| Rps3 [Arundinella hirta] gi|240018146|gb|ACS44454.1| Rps3 [Arundinella hirta var. ciliata] Length = 205 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|240018178|gb|ACS44470.1| Rps3 [Imperata cylindrica var. major] Length = 205 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNRRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690403|gb|ADX99134.1| ribosomal protein S3 [Acantholippia salsoloides] Length = 195 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 112/193 (58%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGVEELQMNLQKEFHYVNRKLNIAIIRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690411|gb|ADX99138.1| ribosomal protein S3 [Mulguraea aspera] Length = 195 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRNLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESKPRGIEELQINLQKEFHYVNRKLNIAITRIVKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|240018152|gb|ACS44457.1| Rps3 [Cymbopogon goeringii] gi|240018180|gb|ACS44471.1| Rps3 [Ischaemum anthephoroides] gi|240018182|gb|ACS44472.1| Rps3 [Ischaemum aristatum var. glaucum] gi|240018194|gb|ACS44478.1| Rps3 [Phacelurus latifolius] gi|240018216|gb|ACS44489.1| Rps3 [Spodiopogon cotulifer] gi|240018222|gb|ACS44492.1| Rps3 [Themeda triandra var. japonica] Length = 205 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|12545437|ref|NP_074987.1| ribosomal protein S3 [Euglena longa] gi|14285746|sp|P58133|RR3_ASTLO RecName: Full=Plastid 30S ribosomal protein S3 gi|12329901|emb|CAC24598.1| ribosomal protein S3 [Euglena longa] Length = 219 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 15/219 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP R G S W+ Y + +D+ IR++L +K ++ I IE+ Sbjct: 1 MGQKTNPNGLRFGKFKKHFSCWYTENKNYSHFVKQDIFIRKFLMEKIKNVFISLIEIEKD 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK---------------LSNMTNSEIHLSVNE 105 +K I ++ + + + +E + + E Sbjct: 61 NKETVIFIHYLNFSKFNKVETNSEKNEINLFKLKNLLLKSLNSFFNVKINFNEFIIKLIE 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 + P ++ IA I +LE+R+ FR+ + + + + G G+K+ SGRLN AE++R Sbjct: 121 IENPILDVRFIANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMARE 180 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 E + EG+VPL TL+A+IDY A+T GS GIKV+++ Sbjct: 181 ESFREGKVPLNTLKANIDYFHCTAKTLSGSLGIKVWLNK 219 >gi|323690393|gb|ADX99129.1| ribosomal protein S3 [Lippia salviifolia] gi|323690397|gb|ADX99131.1| ribosomal protein S3 [Lippia integrifolia] Length = 195 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|240018192|gb|ACS44477.1| Rps3 [Pennisetum alopecuroides var. alopecuroides] Length = 205 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ +++Q + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690437|gb|ADX99151.1| ribosomal protein S3 [Bouchea fluminensis] Length = 193 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 114/191 (59%), Gaps = 11/191 (5%) Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 NYSEGLQEDQKIRDFIKNYVQKNIRTASGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60 Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+ Sbjct: 61 RPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYENPNILAEFIAGQLKNRVSFRKAMKK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY T YG Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYGVL 180 Query: 197 GIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 GIKIWIFIDKE 191 >gi|240018212|gb|ACS44487.1| Rps3 [Pennisetum glaucum] Length = 205 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ +++Q + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 +I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 RIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690401|gb|ADX99133.1| ribosomal protein S3 [Xeroaloysia ovatifolia] Length = 195 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|323690433|gb|ADX99149.1| ribosomal protein S3 [Tamonea boxiana] Length = 196 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 116/194 (59%), Gaps = 12/194 (6%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQ---------AGVAKILIERTHKNCRIIVYSARPGLI 76 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P + Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKKNRRTSSGTGGIARIEIQKRIDLIQVIIFMGFPKSL 60 Query: 77 IGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA 133 I + IE+++ +K + N ++++++ + KP N ++A+ IA+QL+ RV FR+A Sbjct: 61 IESRPRGIEELQMNLQKEFHYVNQKLNIAITRIAKPYGNPNILAEFIAKQLKNRVSFRKA 120 Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 MKRA++ + + G++V +GR++G E++R E EGRVPLQT+RA IDY + T Y Sbjct: 121 MKRAIELSEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIY 180 Query: 194 GSCGIKVYVSLRDE 207 G GIK+++ + E Sbjct: 181 GVLGIKIWIFIDKE 194 >gi|323690423|gb|ADX99144.1| ribosomal protein S3 [Priva cordifolia] Length = 195 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 113/193 (58%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR++++ ++++ G+A+I I++T R+I++ P L+I Sbjct: 1 PKYYSEGLQEDQKIRDFIKNYVQKNIKTSSGAEGIARIEIQKTIDLIRVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + I++++ L N ++ +++ + KP N T++A+ IA QL+ RV FR+AM Sbjct: 61 ENRPRAIKELQMNLEKEFHYVNRKLTIAITRIAKPYGNPTILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR+ G E++R E EGRVPLQT+RA +DY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQLAGRIGGKEIARVEWMREGRVPLQTIRAKMDYCSYPVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|240018172|gb|ACS44467.1| Rps3 [Eragrostis multicaulis] Length = 205 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSCWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|240018218|gb|ACS44490.1| Rps3 [Sporobolus elongatus] Length = 205 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK KK N N +++++ +V +P Sbjct: 61 HIEIQKQIDTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|240018206|gb|ACS44484.1| Rps3 [Setaria viridis subsp. pycnocoma] gi|240018208|gb|ACS44485.1| Rps3 [Setaria chondrachne] gi|240018210|gb|ACS44486.1| Rps3 [Setaria faberi] gi|240018214|gb|ACS44488.1| Rps3 [Setaria verticillata] Length = 205 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ +++Q + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690445|gb|ADX99155.1| ribosomal protein S3 [Petrea volubilis] Length = 195 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR++++ ++++ G+A I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNMRISSGAEGIAHIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+A+ Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAIKRIAKPYGNPNILAEFIAGQLKNRVSFRKAI 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAQIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|240018158|gb|ACS44460.1| Rps3 [Digitaria ciliaris] gi|240018160|gb|ACS44461.1| Rps3 [Digitaria radicosa] Length = 205 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K+ ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKEAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690407|gb|ADX99136.1| ribosomal protein S3 [Verbena officinalis] Length = 193 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 11/191 (5%) Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 NYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60 Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+ Sbjct: 61 KPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180 Query: 197 GIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 GIKIWIFIDKE 191 >gi|240018162|gb|ACS44462.1| Rps3 [Echinochloa crus-galli var. crus-galli] gi|240018164|gb|ACS44463.1| Rps3 [Echinochloa oryzicola] gi|240018166|gb|ACS44464.1| Rps3 [Echinochloa crus-galli var. praticola] Length = 205 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690421|gb|ADX99143.1| ribosomal protein S3 [Rhaphithamnus venustus] Length = 195 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 113/193 (58%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRASSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ESRPQGIEELQMNLQKEFHYVNQKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWMREGRVPLQTIRAKIDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK++ + E Sbjct: 181 VLGIKIWTFIDKE 193 >gi|240018168|gb|ACS44465.1| Rps3 [Eleusine indica] gi|240018188|gb|ACS44475.1| Rps3 [Muhlenbergia huegelii] Length = 205 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|323690395|gb|ADX99130.1| ribosomal protein S3 [Lantana camara] Length = 195 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60 Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 K+A++ + G++V +GR++G E++R E EGRVPLQT+RA +DY + T YG Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKMDYCSYTVRTIYG 180 Query: 195 SCGIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 VLGIKIWIFIDKE 193 >gi|153831343|ref|ZP_01984010.1| ribosomal protein S3 [Vibrio cholerae 623-39] gi|148873177|gb|EDL71312.1| ribosomal protein S3 [Vibrio cholerae 623-39] Length = 141 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 67/141 (47%), Positives = 99/141 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAVQSA 141 A QLERRV+FRRAMKRAVQ+A Sbjct: 121 ASQLERRVMFRRAMKRAVQNA 141 >gi|47097197|ref|ZP_00234762.1| ribosomal protein S3 [Listeria monocytogenes str. 1/2a F6854] gi|47014456|gb|EAL05424.1| ribosomal protein S3 [Listeria monocytogenes str. 1/2a F6854] Length = 156 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 106/156 (67%) Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+Q Sbjct: 1 MNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQ 60 Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183 LE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA ID Sbjct: 61 LEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADID 120 Query: 184 YGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 Y A+T YG G+KV++ + + + + + Sbjct: 121 YAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 156 >gi|194477052|ref|YP_002049231.1| 30S ribosomal protein S3 [Paulinella chromatophora] gi|171192059|gb|ACB43021.1| 30S ribosomal protein S3 [Paulinella chromatophora] Length = 207 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 5/181 (2%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPK 108 ++ I+I R + + +ARPG+++G++G+ IE++R + + N +I ++V E+ + Sbjct: 17 LSDIIISRKADQLEVELRTARPGVLVGRQGSGIEELRNGIQKILDDLNRQIRINVVEIER 76 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 + +A L+A+ IAQQLE+R+ FRRA++ A Q A R G G+K+ SGRLNGAE++RTE Sbjct: 77 VDADAYLLAEYIAQQLEKRMAFRRAIRMATQRAQRAGVLGLKIQVSGRLNGAEIARTEWT 136 Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA--EHRVVEKD 226 EGRVPL TLRA IDY T VA T+YG GIKV+V + + P R + Sbjct: 137 REGRVPLHTLRADIDYATKVASTSYGVLGIKVWVFKGEVIQHETRQPPTGVNPKRRPNRR 196 Query: 227 S 227 S Sbjct: 197 S 197 >gi|323690441|gb|ADX99153.1| ribosomal protein S3 [Duranta serratifolia] Length = 197 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 112/187 (59%), Gaps = 11/187 (5%) Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 NYSKGLQEDQKIRDFIKNYVQKNRRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60 Query: 80 KGTDIEK---IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + IE+ +K + N ++++++ + KP N ++A+ IA+QL+ RV FR+AMK+ Sbjct: 61 RPGGIEELKMNLQKEFHYVNRKLNIAITRIAKPYGNPKILAEFIARQLKNRVSFRKAMKK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ + G G++V +GR+ G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 AIELTEQAGTKGIQVQIAGRIGGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180 Query: 197 GIKVYVS 203 GIK+++ Sbjct: 181 GIKIWIF 187 >gi|323690405|gb|ADX99135.1| ribosomal protein S3 [Aloysia citrodora] Length = 193 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 112/191 (58%), Gaps = 11/191 (5%) Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I Sbjct: 1 NYSQGLQEDQKIRDLIQNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60 Query: 80 KGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+ Sbjct: 61 RPRGVEELQMNLQKEFHYVNRKLNIAIIRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180 Query: 197 GIKVYVSLRDE 207 GIK+++ + E Sbjct: 181 GIKIWIFIDKE 191 >gi|240018198|gb|ACS44480.1| Rps3 [Phragmites japonicus] Length = 205 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG +S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIELDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAESIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|240018170|gb|ACS44466.1| Rps3 [Eragrostis ferruginea] Length = 205 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 17/205 (8%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53 FRLG S WFA+ Y L ED KIR ++ ++++ + Sbjct: 1 FRLGTTQNHYSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I++ +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197 +PLQT+RA IDY T YG G Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205 >gi|222139924|ref|YP_002519992.1| ribosomal protein S3 [Ephedra equisetina] gi|220983593|dbj|BAH11360.1| ribosomal protein S3 [Ephedra equisetina] Length = 215 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 121/215 (56%), Gaps = 8/215 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54 MG K+NP+ FRLG+ NS WFA+ EY L ED+KI + ++ ++ G+ + Sbjct: 1 MGHKVNPMGFRLGLTQNHNSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGR 60 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 I I+R II+Y P +K ++ K+ + + +++++ + KP Sbjct: 61 IEIQRKIDLINIIIYIGFPIFFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQK 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 ++A+ IA QLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GR Sbjct: 121 TNILAEYIALQLEKRVAVKKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKIKLGR 180 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 V LQTLRA +DY + T +G+ GI++++ ++++ Sbjct: 181 VTLQTLRAEMDYSSFTVRTIHGALGIQLWIFMKEQ 215 >gi|187763140|ref|YP_001876615.1| ribosomal protein S3 [Welwitschia mirabilis] gi|163311670|gb|ABY26828.1| ribosomal protein S3 [Welwitschia mirabilis] gi|220983421|dbj|BAH11190.1| ribosomal protein S3 [Welwitschia mirabilis] Length = 214 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 7/214 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54 MG K+NP+ FRLG+ +S WF + Y + ED+KI + ++ + ++ G+A+ Sbjct: 1 MGHKVNPLGFRLGITQKNHSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIAR 60 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV-PKPEINA 113 I IER +I+++ + +KG + N+ + E+ KP NA Sbjct: 61 IEIERKVDLINVIIFTGFSSFLNKEKGKISSLKNEIRQNLGTKKKLNVKTEILKKPYQNA 120 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 ++ + IA QLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GRV Sbjct: 121 KILVEFIASQLEKRVAVKKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGRV 180 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 LQTLRA ++Y + T +G+ GI++++ ++++ Sbjct: 181 TLQTLRAEMNYCSYTVRTIHGTLGIQLWIFMKEQ 214 >gi|240018176|gb|ACS44469.1| Rps3 [Festuca subulata var. japonica] Length = 220 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCYYPIRTIYGVLG 220 >gi|313616919|gb|EFR89566.1| ribosomal protein S3 [Listeria innocua FSL S4-378] Length = 152 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 65/152 (42%), Positives = 105/152 (69%) Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE R Sbjct: 1 IHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGR 60 Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 V FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY Sbjct: 61 VSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWE 120 Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 A+T YG G+KV++ + + + + + Sbjct: 121 EADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 152 >gi|323690431|gb|ADX99148.1| ribosomal protein S3 [Casselia glaziovii] Length = 199 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 115/197 (58%), Gaps = 15/197 (7%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQ---------AGVAKILIERTHKNCRIIVYSARPGLI 76 Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+ Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKKNRRTPSRAGGIARIEIQKRIDLIQVIIFMGSPKLL 60 Query: 77 IGKKG------TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130 I K +++ +K + N ++++++ + KP N+T++A+ IA QL RV F Sbjct: 61 IESKQSRRRRIEELQMNLQKEFHYGNRKLNIAITRIAKPYGNSTILAEFIANQLNNRVSF 120 Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE 190 R+AMK+A++ A + G G++V +GR+ G E++R E EGRVPLQT+RA +DY + Sbjct: 121 RKAMKKAIKLAEQAGTKGIQVQLAGRIGGKEIARVEWLREGRVPLQTIRAKMDYCSYPVR 180 Query: 191 TAYGSCGIKVYVSLRDE 207 T YG GIK+++ + E Sbjct: 181 TIYGVLGIKIWIFIDKE 197 >gi|240018186|gb|ACS44474.1| Rps3 [Lolium perenne] Length = 220 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018148|gb|ACS44455.1| Rps3 [Beckmannia syzigachne] gi|240018174|gb|ACS44468.1| Rps3 [Festuca ovina var. ovina] Length = 220 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018140|gb|ACS44451.1| Rps3 [Alopecurus japonicus] Length = 220 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018184|gb|ACS44473.1| Rps3 [Lolium sp. YDK2008447] Length = 220 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018202|gb|ACS44482.1| Rps3 [Sasa borealis] gi|240018204|gb|ACS44483.1| Rps3 [Sasa palmata] Length = 220 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNRKMDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKIKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 AGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018200|gb|ACS44481.1| Rps3 [Poa pratensis] Length = 220 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKSDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSANQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P +++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018138|gb|ACS44450.1| Rps3 [Cinna latifolia] Length = 220 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKMDSGSSSEVITRIEIKKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018142|gb|ACS44452.1| Rps3 [Arrhenatherum elatius] Length = 220 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018224|gb|ACS44493.1| Rps3 [Trisetum bifidum] gi|240018226|gb|ACS44494.1| Rps3 [Trisetum sibiricum] Length = 220 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKQIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|225621034|ref|YP_002722292.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1] gi|225215854|gb|ACN84588.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1] Length = 202 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 74/183 (40%), Positives = 107/183 (58%) Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 + ++ I I R I + +AR G++IG KG +E ++ + M +H S+ Sbjct: 18 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSI 77 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 E+ E++A L AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++ Sbjct: 78 TEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 137 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223 RTE Y G VPL TLRA+IDYGTA A T +G GIKV++ + + + A + Sbjct: 138 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVIS 197 Query: 224 EKD 226 K Sbjct: 198 AKG 200 >gi|240018136|gb|ACS44449.1| Rps3 [Agrostis clavata var. nukabo] Length = 220 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P T++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYREPTILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018154|gb|ACS44458.1| Rps3 [Neomolinia fauriei] gi|240018156|gb|ACS44459.1| Rps3 [Neomolinia japonica] Length = 220 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|323690425|gb|ADX99145.1| ribosomal protein S3 [Pitraea cuneato-ovata] Length = 191 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 114/191 (59%), Gaps = 9/191 (4%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQA------GVAKILIERTHKNCRIIVYSARPGLIIGK 79 Y L ED KIR++++ +L++ G+ +I I++T + R+I+++ P L+I Sbjct: 1 PKCYSEGLQEDQKIRDFIKNYLQKNISSGTEGITRIEIQKTIDSIRVIIFTGFPKLLIKN 60 Query: 80 KGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + I++++ L N ++++++ + KP N T++A+ IA QL+ RV FR+AM++ Sbjct: 61 RPEVIKELQMNLEKEFHYVNRKLNIAITRIVKPYGNPTILAEFIAVQLKSRVPFRKAMQK 120 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 A++ A + G++V +GRL+G E++ EGRVP QT++A +DY + T +G Sbjct: 121 AIELAEQADTKGIQVQIAGRLDGKEIAGVAWMREGRVPRQTIQAKMDYCSYPVRTIFGVL 180 Query: 197 GIKVYVSLRDE 207 GIK++V +E Sbjct: 181 GIKIWVFKEEE 191 >gi|240018190|gb|ACS44476.1| Rps3 [Phaenosperma globosa] Length = 220 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|115443549|ref|YP_778568.1| 30S ribosomal protein S3 [Bigelowiella natans] gi|122233793|sp|Q06J59|RR3_BIGNA RecName: Full=30S ribosomal protein S3, chloroplastic gi|110810194|gb|ABG91400.1| 30S ribosomal protein S3 [Bigelowiella natans] Length = 246 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 114/244 (46%), Gaps = 39/244 (15%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------------QCHL 47 MGQK++P+ FR+G+N + S+WF + +Y LL +D IR+ + + L Sbjct: 1 MGQKVHPLGFRVGLNGNYKSKWFVKPKDYSLLLFQDYLIRKNIFNYFNILNNSKNKKNLL 60 Query: 48 KQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG-------------------TDIEKIR 88 + I I R I +Y A +I + + Sbjct: 61 DSINITDIKINRKFDQVYIDIYVASMNKVIFNTSGSNSDPLIKIQSNKIVDQLQRVLLKQ 120 Query: 89 KKLSNMTNSEIHLSVNEVPK----PEINAT--LIAQSIAQQLERRVVFRRAMKRAVQSAM 142 N+ N +++ S + P+IN IA+ + LE RV FRRA+K + + Sbjct: 121 VSSFNLGNKKVNNSSKIIVNIIESPDINTNAVFIAKCLIDDLENRVPFRRALKTILDTTQ 180 Query: 143 RF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 + GVK+ SGRLNG E++R+E EGR+PLQTL A+I Y VAET YG G+KV+ Sbjct: 181 KQKNLAGVKIQISGRLNGIEMARSEWVREGRIPLQTLTANIGYYNDVAETKYGLLGVKVW 240 Query: 202 VSLR 205 V Sbjct: 241 VYKN 244 >gi|240018196|gb|ACS44479.1| Rps3 [Phalaris arundinacea] Length = 220 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSKGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + +I I++ +I++ P L+ K ++EK +K + N Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|330720676|gb|EGG98919.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC2047] Length = 137 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 63/130 (48%), Positives = 89/130 (68%) Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + +++ E+ KP+++A LIA S+A QLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL Sbjct: 2 PVQINIEEIRKPDLDAKLIADSVAGQLERRVMFRRAMKRAVQNAMRQGAEGIKIQVGGRL 61 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 GAE++R+E Y EGRVPL TLRA IDY T+ A T YG G+KV+V + + + Sbjct: 62 GGAEIARSEWYREGRVPLHTLRADIDYATSEASTTYGIIGVKVWVFKGEVLGGIEQVRAE 121 Query: 218 AEHRVVEKDS 227 + + + Sbjct: 122 RKADKANQGN 131 >gi|240018220|gb|ACS44491.1| Rps3 [Stipa sibirica] Length = 220 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y + ED KIR ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGIQEDKKIRNCIKNYIQKNSKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNRKTDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R EC +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018134|gb|ACS44448.1| Rps3 [Elymus tsukushiensis var. transiens] Length = 220 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R E +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|240018150|gb|ACS44456.1| Rps3 [Bromus remotiflorus] Length = 220 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51 FRLG +S WFA+ Y L ED KIR+ ++ ++++ Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIESDSSSEVIT 60 Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97 + I I++ +I++ P L+ K ++EK +K N N Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL Sbjct: 121 RLNISIEKVKEPYRQPHILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 G E++R E +GR+PLQT+RA IDY T YG G Sbjct: 181 GGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220 >gi|213023088|ref|ZP_03337535.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 138 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 69/138 (50%), Positives = 99/138 (71%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120 Query: 121 AQQLERRVVFRRAMKRAV 138 QLERRV+FRRAMKRAV Sbjct: 121 TSQLERRVMFRRAMKRAV 138 >gi|294669830|ref|ZP_06734889.1| hypothetical protein NEIELOOT_01723 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308223|gb|EFE49466.1| hypothetical protein NEIELOOT_01723 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 157 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 72/152 (47%), Positives = 106/152 (69%), Gaps = 3/152 (1%) Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 ++IG+KG DI+ +++ L N+ +H+++ E+ KPE++A +IA IAQQLE+RV FRRAM Sbjct: 1 MVIGRKGEDIDVLKRDLQNLMGVPVHVNIEEIRKPELDAQIIADGIAQQLEKRVQFRRAM 60 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 KRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA++ Y T+ A T YG Sbjct: 61 KRAMQNAMRVGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRANVSYATSEANTTYG 120 Query: 195 SCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 G+KV+V + D + E + Sbjct: 121 VIGLKVWVYTGE---GKDVVLNKPEQEHKRRK 149 >gi|149912423|ref|ZP_01900961.1| 30S ribosomal subunit protein S3 [Moritella sp. PE36] gi|149804494|gb|EDM64588.1| 30S ribosomal subunit protein S3 [Moritella sp. PE36] Length = 137 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 4/129 (3%) Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 +++ E+ KPE++A L+A+ IA ERRV+FRRAMKRAVQ+AMR GA G+KV SGRL G Sbjct: 3 QINIAEIRKPELDAKLVAEGIASPPERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGG 62 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV----SDSDSTI 215 AE++R E Y EGRVPL T RA IDY TA A T YG G+KV++ + + + Sbjct: 63 AEIARAEWYREGRVPLHTFRADIDYSTAEALTTYGIIGVKVWIFKGEVLGKLPLTQEVEA 122 Query: 216 PAAEHRVVE 224 P+ R Sbjct: 123 PSKPKRRSR 131 >gi|323690429|gb|ADX99147.1| ribosomal protein S3 [Rehdera trinervis] Length = 189 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 114/185 (61%), Gaps = 11/185 (5%) Query: 30 GALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGKKG 81 L ED KIR++++ ++++ G+A+I I++ +II++ P +I + Sbjct: 3 SEGLQEDQKIRDFIKNYVQKNTRTSSGAEGIARIKIQKRIDLIQIIIFMGFPKFLIESRP 62 Query: 82 TDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV 138 IE+++ +K + N ++++++ ++ KP +A ++A+ IA+QL RV FR+AMK+A+ Sbjct: 63 RGIEELQMNLQKEFHYVNRKLNIAITKIAKPYGSANILAEFIAEQLNNRVPFRKAMKKAI 122 Query: 139 QSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + A + G++V +GR+NG E++R E +GRVPLQT+RA +DY + T YG GI Sbjct: 123 ELAKQADTKGIQVQMAGRINGKEIARVEWIRDGRVPLQTIRAKMDYCSYTIWTIYGVLGI 182 Query: 199 KVYVS 203 K+++ Sbjct: 183 KIWIF 187 >gi|33322055|gb|AAQ06746.1|AF496090_1 30s ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis] Length = 147 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 103/148 (69%), Gaps = 1/148 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++ARPG++IGK G ++ + K+++ +TN ++H+++ E+ KP+++A L+A I Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVXTLNKEINALTNKQVHINIVEIKKPDLDAKLVADGI 119 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADG 148 A+QLE R+ FRRA ++A Q +MR GA G Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKG 147 >gi|153820558|ref|ZP_01973225.1| ribosomal protein S3 [Vibrio cholerae NCTC 8457] gi|126508898|gb|EAZ71492.1| ribosomal protein S3 [Vibrio cholerae NCTC 8457] Length = 119 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 63/110 (57%), Positives = 79/110 (71%) Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174 L+A SIA QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVP Sbjct: 1 LVADSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVP 60 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 L TLRA IDY T+ A T YG G+KV++ + + + AAE + + Sbjct: 61 LHTLRADIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 110 >gi|309808527|ref|ZP_07702426.1| ribosomal protein S3 [Lactobacillus iners LactinV 01V1-a] gi|308168355|gb|EFO70474.1| ribosomal protein S3 [Lactobacillus iners LactinV 01V1-a] Length = 151 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 63/148 (42%), Positives = 98/148 (66%), Gaps = 1/148 (0%) Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 ++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +SIA+QLE R+ FRRA Sbjct: 1 MVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESIAKQLEARIAFRRAT 60 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 ++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA IDY A T YG Sbjct: 61 RKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRADIDYAWVEAATTYG 120 Query: 195 SCGIKVYVSLRDEVSDSDSTIPAAEHRV 222 G+KV+++ E+ P A + Sbjct: 121 QIGVKVWINRG-EILPQRKNKPVASKKA 147 >gi|297837921|ref|XP_002886842.1| hypothetical protein ARALYDRAFT_475549 [Arabidopsis lyrata subsp. lyrata] gi|297332683|gb|EFH63101.1| hypothetical protein ARALYDRAFT_475549 [Arabidopsis lyrata subsp. lyrata] Length = 160 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 3/156 (1%) Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVP 107 G+A+I I++ +II+Y P L+I K +++ +K N N ++++++ + Sbjct: 3 GIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRIS 62 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEW 122 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+ A IDY + T YG GIK+++ Sbjct: 123 IREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIF 158 >gi|213496090|gb|ACJ49193.1| ribosomal protein S3 [uncultured Geobacter sp.] Length = 126 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 65/127 (51%), Positives = 100/127 (78%), Gaps = 1/127 (0%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61 GQK+NP+ FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER Sbjct: 1 GQKVNPVGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERAA 59 Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++A Sbjct: 60 GKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENVA 119 Query: 122 QQLERRV 128 QLERR+ Sbjct: 120 MQLERRI 126 >gi|297846050|ref|XP_002890906.1| hypothetical protein ARALYDRAFT_473322 [Arabidopsis lyrata subsp. lyrata] gi|297336748|gb|EFH67165.1| hypothetical protein ARALYDRAFT_473322 [Arabidopsis lyrata subsp. lyrata] Length = 160 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 96/156 (61%), Gaps = 3/156 (1%) Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVP 107 G+A+I I++ +II+Y P L+I K +E+++ +K N N ++++++ + Sbjct: 3 GIARIEIQKRINLIQIIIYMGFPKLLIEDKPRRVEELQINVQKELNCVNRKLNIAITRIS 62 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 P + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEW 122 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EGRVPLQT+ A IDY + T YG GIK+++ Sbjct: 123 IREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIF 158 >gi|254373698|ref|ZP_04989181.1| hypothetical protein FTDG_01480 [Francisella novicida GA99-3548] gi|151571419|gb|EDN37073.1| hypothetical protein FTDG_01480 [Francisella novicida GA99-3548] Length = 116 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 61/120 (50%), Positives = 87/120 (72%), Gaps = 5/120 (4%) Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 KPEI+A L+A+S+AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E Sbjct: 1 KPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEW 60 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 +GRVPLQT RA +DY TA A T YG G+KV++ + + AE + +K + Sbjct: 61 ARDGRVPLQTFRADVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 115 >gi|332139867|ref|YP_004425605.1| 30S ribosomal protein S3 [Alteromonas macleodii str. 'Deep ecotype'] gi|327549889|gb|AEA96607.1| 30S ribosomal protein S3 [Alteromonas macleodii str. 'Deep ecotype'] Length = 143 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 4/126 (3%) Query: 106 VPKPEINATLI-AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 + KP + A +LERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R Sbjct: 14 ISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 73 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHR 221 +E Y EGRVPL T RA IDY T+ A T YG G+KV++ + + + PAA+ + Sbjct: 74 SEWYREGRVPLHTFRADIDYATSEASTTYGIIGVKVWIFKGEVLGGLPTTQEQAPAAQPK 133 Query: 222 VVEKDS 227 +++ Sbjct: 134 KKGRNA 139 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG 51 MGQK++P RLG++ W S W+A ++Y L + R ++ ++ A Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNAM 51 >gi|295154084|gb|ADF82951.1| ribosomal protein S3 [Chasmanthium laxum] Length = 193 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKMESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLAGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|140068413|gb|ABE87621.2| Bacterial ribosomal protein S3 [Medicago truncatula] Length = 158 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRLG +S WFA+ Y L ED IR+ ++ I++T Sbjct: 1 MGQKIHPFGFRLGTTPNHDSIWFAQPKNYSENLKEDKIIRDCIKN----------YIQKT 50 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + I K+ I+ +K N +I++++ +P + ++A+ I Sbjct: 51 SGVEGIG------RIKIKKRINLIQTNVQKNLNCVTRKINITITRIPNTYSDPNILAEFI 104 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 A QL+ R+ FR+A+K+A++ A + GV+V +GR++G E++ E EG V Sbjct: 105 AGQLKNRISFRKAIKKAIELAEQTCTKGVQVQIAGRIDGKEIACVEWIREGDV 157 >gi|295154454|gb|ADF83136.1| ribosomal protein S3 [Monanthochloe littoralis] Length = 193 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154208|gb|ADF83013.1| ribosomal protein S3 [Bouteloua parryi] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDRKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYGEPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154200|gb|ADF83009.1| ribosomal protein S3 [Bouteloua dimorpha] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYVQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154196|gb|ADF83007.1| ribosomal protein S3 [Bouteloua curtipendula] gi|295154250|gb|ADF83034.1| ribosomal protein S3 [Bouteloua uniflora] gi|295154336|gb|ADF83077.1| ribosomal protein S3 [Bouteloua reflexa] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154306|gb|ADF83062.1| ribosomal protein S3 [Sporobolus indicus] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKQI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK KK N N +++++ +V +P ++A+ I Sbjct: 61 DTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154178|gb|ADF82998.1| ribosomal protein S3 [Chasmanthium latifolium] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154246|gb|ADF83032.1| ribosomal protein S3 [Bouteloua repens] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + +I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITRIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154372|gb|ADF83095.1| ribosomal protein S3 [Trichoneura weberbaueri] gi|295154464|gb|ADF83141.1| ribosomal protein S3 [Trichoneura eleusinoides] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKLESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154304|gb|ADF83061.1| ribosomal protein S3 [Trichloris pluriflora] gi|295154368|gb|ADF83093.1| ribosomal protein S3 [Trichloris pluriflora] gi|295154370|gb|ADF83094.1| ribosomal protein S3 [Trichloris crinita] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 + ++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVTIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154194|gb|ADF83006.1| ribosomal protein S3 [Bouteloua barbata] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDRKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154128|gb|ADF82973.1| ribosomal protein S3 [Eragrostis lanicaulis] gi|295154198|gb|ADF83008.1| ribosomal protein S3 [Bouteloua dactyloides] gi|295154202|gb|ADF83010.1| ribosomal protein S3 [Bouteloua diversispicula] gi|295154204|gb|ADF83011.1| ribosomal protein S3 [Bouteloua gracilis] gi|295154248|gb|ADF83033.1| ribosomal protein S3 [Bouteloua simplex] Length = 193 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154206|gb|ADF83012.1| ribosomal protein S3 [Bouteloua hirsuta] Length = 193 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIQELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154328|gb|ADF83073.1| ribosomal protein S3 [Rytidosperma pictum] gi|295154422|gb|ADF83120.1| ribosomal protein S3 [Austrodanthonia penicillata] Length = 193 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154064|gb|ADF82941.1| ribosomal protein S3 [Danthonia compressa] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ H+++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNHIQKNRKKGSNRKIESDPSSEVITHIEIQKEM 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVLIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154310|gb|ADF83064.1| ribosomal protein S3 [Sporobolus atrovirens] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNSKKSSNRKIESDASSEVITHIEIQKQI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK KK N N +++++ +V +P ++A+ I Sbjct: 61 NTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154358|gb|ADF83088.1| ribosomal protein S3 [Tripogon yunnanensis] gi|295154360|gb|ADF83089.1| ribosomal protein S3 [Tripogon spicatus] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++ + + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYILKNRKKSLNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154038|gb|ADF82928.1| ribosomal protein S3 [Entoplocamia aristulata] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154408|gb|ADF83113.1| ribosomal protein S3 [Muhlenbergia richardsonis] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154270|gb|ADF83044.1| ribosomal protein S3 [Aegopogon cenchroides] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154152|gb|ADF82985.1| ribosomal protein S3 [Bewsia biflora] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKTESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154078|gb|ADF82948.1| ribosomal protein S3 [Chloris submutica] gi|295154080|gb|ADF82949.1| ribosomal protein S3 [Chloris radiata] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154418|gb|ADF83118.1| ribosomal protein S3 [Mosdenia leptostachys] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR + ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIMNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEX 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154288|gb|ADF83053.1| ribosomal protein S3 [Tetrapogon spathaceus] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++ K +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELGKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090471|gb|ADW08507.1| ribosomal protein S3 [Muhlenbergia filiformis] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154314|gb|ADF83066.1| ribosomal protein S3 [Sohnsia filifolia] gi|295154316|gb|ADF83067.1| ribosomal protein S3 [Sohnsia filifolia] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLRKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154252|gb|ADF83035.1| ribosomal protein S3 [Brachyachne patentiflora] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYGQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154032|gb|ADF82925.1| ribosomal protein S3 [Eragrostis parviflora] gi|295154126|gb|ADF82972.1| ribosomal protein S3 [Eragrostis kennedyae] gi|295154134|gb|ADF82976.1| ribosomal protein S3 [Eragrostis barrelieri] gi|295154240|gb|ADF83029.1| ribosomal protein S3 [Aegopogon tenellus] gi|295154260|gb|ADF83039.1| ribosomal protein S3 [Cottea pappophoroides] gi|295154286|gb|ADF83052.1| ribosomal protein S3 [Tetrapogon villosus] gi|295154326|gb|ADF83072.1| ribosomal protein S3 [Saugetia fasciculata] gi|320090413|gb|ADW08478.1| ribosomal protein S3 [Muhlenbergia alamosae] gi|320090587|gb|ADW08565.1| ribosomal protein S3 [Muhlenbergia tarahumara] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154044|gb|ADF82931.1| ribosomal protein S3 [Enneapogon desvauxii] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIDSDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P + K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNFLKKKGAIEELEKDIQKEVNSVNRRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154468|gb|ADF83143.1| ribosomal protein S3 [Perotis indica] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKQI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154066|gb|ADF82942.1| ribosomal protein S3 [Dactyloctenium giganteum] gi|295154068|gb|ADF82943.1| ribosomal protein S3 [Dactyloctenium bogdanii] gi|295154070|gb|ADF82944.1| ribosomal protein S3 [Dactyloctenium australe] gi|295154218|gb|ADF83018.1| ribosomal protein S3 [Brachychloa schiemanniana] gi|295154228|gb|ADF83023.1| ribosomal protein S3 [Dactyloctenium aegyptium] gi|295154508|gb|ADF83163.1| ribosomal protein S3 [Neobouteloua lophostachya] Length = 193 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154192|gb|ADF83005.1| ribosomal protein S3 [Bouteloua aristidoides] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N ++++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIGIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090589|gb|ADW08566.1| ribosomal protein S3 [Muhlenbergia tenella] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSLNHRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154296|gb|ADF83057.1| ribosomal protein S3 [Sporobolus teretifolius] gi|295154302|gb|ADF83060.1| ribosomal protein S3 [Sporobolus pinetorum] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154342|gb|ADF83080.1| ribosomal protein S3 [Uniola paniculata] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 R+I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I Sbjct: 61 DTIRVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154376|gb|ADF83097.1| ribosomal protein S3 [Triplasis purpurea] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154034|gb|ADF82926.1| ribosomal protein S3 [Eragrostis lugens] gi|295154040|gb|ADF82929.1| ribosomal protein S3 [Enteropogon ramosus] gi|295154100|gb|ADF82959.1| ribosomal protein S3 [Gouinia paraguayensis] gi|295154148|gb|ADF82983.1| ribosomal protein S3 [Eragrostis pilgeri subsp. ancashensis] gi|295154338|gb|ADF83078.1| ribosomal protein S3 [Vaseyochloa multinervosa] gi|295154374|gb|ADF83096.1| ribosomal protein S3 [Tridens muticus] gi|295154424|gb|ADF83121.1| ribosomal protein S3 [Microchloa kunthii] gi|295154436|gb|ADF83127.1| ribosomal protein S3 [Lintonia nutans] gi|295154492|gb|ADF83155.1| ribosomal protein S3 [Muhlenbergia ramulosa] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090441|gb|ADW08492.1| ribosomal protein S3 [Muhlenbergia ciliata] gi|320090539|gb|ADW08541.1| ribosomal protein S3 [Muhlenbergia pectinata] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNHRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154428|gb|ADF83123.1| ribosomal protein S3 [Melanocenchris jacquemontii] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154476|gb|ADF83147.1| ribosomal protein S3 [Pereilema ciliatum] Length = 193 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ +++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNFIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154130|gb|ADF82974.1| ribosomal protein S3 [Eragrostis lurida subsp. contracta] gi|295154150|gb|ADF82984.1| ribosomal protein S3 [Eragrostis lurida] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154238|gb|ADF83028.1| ribosomal protein S3 [Cynodon plectostachyus] gi|295154388|gb|ADF83103.1| ribosomal protein S3 [Triodia irritans var. laxispicata] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154256|gb|ADF83037.1| ribosomal protein S3 [Cleistogenes squarrosa] gi|295154272|gb|ADF83045.1| ribosomal protein S3 [Cleistogenes mucronata] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++E+ +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELERDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154216|gb|ADF83017.1| ribosomal protein S3 [Calamovilfa longifolia] gi|295154264|gb|ADF83041.1| ribosomal protein S3 [Crypsis aculeata] gi|295154266|gb|ADF83042.1| ribosomal protein S3 [Crypsis schoenoides] gi|295154294|gb|ADF83056.1| ribosomal protein S3 [Sporobolus wrightii] gi|295154298|gb|ADF83058.1| ribosomal protein S3 [Sporobolus rigens] gi|295154308|gb|ADF83063.1| ribosomal protein S3 [Sporobolus cryptandrus] gi|295154312|gb|ADF83065.1| ribosomal protein S3 [Spartina densiflora] gi|295154332|gb|ADF83075.1| ribosomal protein S3 [Sporobolus indicus var. pyramidalis] gi|295154462|gb|ADF83140.1| ribosomal protein S3 [Pogoneura biflora] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154058|gb|ADF82938.1| ribosomal protein S3 [Dignathia villosa] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154346|gb|ADF83082.1| ribosomal protein S3 [Tuctoria greenei] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPYREPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154030|gb|ADF82924.1| ribosomal protein S3 [Dignathia hirtella] gi|295154036|gb|ADF82927.1| ribosomal protein S3 [Eragrostis lugens] gi|295154042|gb|ADF82930.1| ribosomal protein S3 [Enteropogon macrostachyus] gi|295154048|gb|ADF82933.1| ribosomal protein S3 [Distichlis spicata] gi|295154050|gb|ADF82934.1| ribosomal protein S3 [Distichlis spicata] gi|295154052|gb|ADF82935.1| ribosomal protein S3 [Distichlis scoparia] gi|295154060|gb|ADF82939.1| ribosomal protein S3 [Eragrostis desertorum] gi|295154086|gb|ADF82952.1| ribosomal protein S3 [Leptochloa dubia] gi|295154090|gb|ADF82954.1| ribosomal protein S3 [Eragrostis soratensis] gi|295154096|gb|ADF82957.1| ribosomal protein S3 [Hilaria cenchroides] gi|295154106|gb|ADF82962.1| ribosomal protein S3 [Eustachys distichophylla] gi|295154112|gb|ADF82965.1| ribosomal protein S3 [Eragrostis reptans] gi|295154114|gb|ADF82966.1| ribosomal protein S3 [Eragrostis minor] gi|295154118|gb|ADF82968.1| ribosomal protein S3 [Eragrostis pergracilis] gi|295154120|gb|ADF82969.1| ribosomal protein S3 [Eragrostis cilianensis] gi|295154124|gb|ADF82971.1| ribosomal protein S3 [Eragrostis eriopoda] gi|295154138|gb|ADF82978.1| ribosomal protein S3 [Eragrostis dielsii] gi|295154140|gb|ADF82979.1| ribosomal protein S3 [Eragrostis intermedia] gi|295154142|gb|ADF82980.1| ribosomal protein S3 [Eragrostis nigricans] gi|295154144|gb|ADF82981.1| ribosomal protein S3 [Eragrostis pastoensis] gi|295154146|gb|ADF82982.1| ribosomal protein S3 [Eragrostis pectinacea] gi|295154164|gb|ADF82991.1| ribosomal protein S3 [Apochiton burttii] gi|295154170|gb|ADF82994.1| ribosomal protein S3 [Astrebla elymoides] gi|295154172|gb|ADF82995.1| ribosomal protein S3 [Astrebla lappacea] gi|295154174|gb|ADF82996.1| ribosomal protein S3 [Astrebla pectinata] gi|295154182|gb|ADF83000.1| ribosomal protein S3 [Acrachne racemosa] gi|295154212|gb|ADF83015.1| ribosomal protein S3 [Cynodon arcuatus] gi|295154220|gb|ADF83019.1| ribosomal protein S3 [Brachyachne tenella] gi|295154222|gb|ADF83020.1| ribosomal protein S3 [Brachyachne patentiflora] gi|295154226|gb|ADF83022.1| ribosomal protein S3 [Brachyachne convergens] gi|295154230|gb|ADF83024.1| ribosomal protein S3 [Cynodon transvaalensis] gi|295154232|gb|ADF83025.1| ribosomal protein S3 [Cynodon plectostachyus] gi|295154234|gb|ADF83026.1| ribosomal protein S3 [Cynodon pascuus] gi|295154236|gb|ADF83027.1| ribosomal protein S3 [Cynodon maritimus] gi|295154242|gb|ADF83030.1| ribosomal protein S3 [Coelachyrum poiflorum] gi|295154244|gb|ADF83031.1| ribosomal protein S3 [Leptochloa filiformis] gi|295154254|gb|ADF83036.1| ribosomal protein S3 [Cynodon hirsutus] gi|295154258|gb|ADF83038.1| ribosomal protein S3 [Cynodon dactylon] gi|295154262|gb|ADF83040.1| ribosomal protein S3 [Craspedorhachis africana] gi|295154276|gb|ADF83047.1| ribosomal protein S3 [Tragus koelerioides] gi|295154278|gb|ADF83048.1| ribosomal protein S3 [Tragus heptaneuron] gi|295154280|gb|ADF83049.1| ribosomal protein S3 [Tragus berteronianus] gi|295154282|gb|ADF83050.1| ribosomal protein S3 [Tragus berteronianus] gi|295154284|gb|ADF83051.1| ribosomal protein S3 [Tragus australianus] gi|295154320|gb|ADF83069.1| ribosomal protein S3 [Schoenefeldia transiens] gi|295154322|gb|ADF83070.1| ribosomal protein S3 [Schoenefeldia gracilis] gi|295154330|gb|ADF83074.1| ribosomal protein S3 [Jouvea pilosa] gi|295154334|gb|ADF83076.1| ribosomal protein S3 [Triodia pungens] gi|295154362|gb|ADF83090.1| ribosomal protein S3 [Tragus pedunculatus] gi|295154364|gb|ADF83091.1| ribosomal protein S3 [Triodia bynoei] gi|295154378|gb|ADF83098.1| ribosomal protein S3 [Triodia brizoides] gi|295154380|gb|ADF83099.1| ribosomal protein S3 [Triodia rigidissima] gi|295154382|gb|ADF83100.1| ribosomal protein S3 [Triodia desertorum] gi|295154386|gb|ADF83102.1| ribosomal protein S3 [Triodia intermedia] gi|295154390|gb|ADF83104.1| ribosomal protein S3 [Triodia melvillei] gi|295154392|gb|ADF83105.1| ribosomal protein S3 [Tragus mongolorum] gi|295154394|gb|ADF83106.1| ribosomal protein S3 [Triodia basedowii] gi|295154396|gb|ADF83107.1| ribosomal protein S3 [Microchloa caffra] gi|295154400|gb|ADF83109.1| ribosomal protein S3 [Muhlenbergia brandegeei] gi|295154406|gb|ADF83112.1| ribosomal protein S3 [Muhlenbergia appressa] gi|295154412|gb|ADF83115.1| ribosomal protein S3 [Muhlenbergia schreberi] gi|295154420|gb|ADF83119.1| ribosomal protein S3 [Monelytrum luederitzianum] gi|295154440|gb|ADF83129.1| ribosomal protein S3 [Lepturus repens] gi|295154444|gb|ADF83131.1| ribosomal protein S3 [Lepturus gasparricensis] gi|295154446|gb|ADF83132.1| ribosomal protein S3 [Lepturus acutiglumis] gi|295154450|gb|ADF83134.1| ribosomal protein S3 [Leptochloa viscida] gi|295154452|gb|ADF83135.1| ribosomal protein S3 [Leptochloa fusca subsp. uninervia] gi|295154460|gb|ADF83139.1| ribosomal protein S3 [Polevansia rigida] gi|295154474|gb|ADF83146.1| ribosomal protein S3 [Pereilema crinitum] gi|295154478|gb|ADF83148.1| ribosomal protein S3 [Pereilema beyrichianum] gi|295154482|gb|ADF83150.1| ribosomal protein S3 [Orinus thoroldii] gi|295154488|gb|ADF83153.1| ribosomal protein S3 [Willkommia sarmentosa] gi|295154490|gb|ADF83154.1| ribosomal protein S3 [Muhlenbergia racemosa] gi|295154498|gb|ADF83158.1| ribosomal protein S3 [Orinus thoroldii] gi|295154502|gb|ADF83160.1| ribosomal protein S3 [Orinus kokonorica] gi|320090415|gb|ADW08479.1| ribosomal protein S3 [Muhlenbergia andina] gi|320090435|gb|ADW08489.1| ribosomal protein S3 [Muhlenbergia californica] gi|320090445|gb|ADW08494.1| ribosomal protein S3 [Muhlenbergia curtifolia] gi|320090481|gb|ADW08512.1| ribosomal protein S3 [Muhlenbergia glauca] gi|320090483|gb|ADW08513.1| ribosomal protein S3 [Muhlenbergia glauca] gi|320090489|gb|ADW08516.1| ribosomal protein S3 [Muhlenbergia himalayensis] gi|320090491|gb|ADW08517.1| ribosomal protein S3 [Muhlenbergia huegelii] gi|320090501|gb|ADW08522.1| ribosomal protein S3 [Muhlenbergia japonica] gi|320090503|gb|ADW08523.1| ribosomal protein S3 [Muhlenbergia japonica] gi|320090521|gb|ADW08532.1| ribosomal protein S3 [Muhlenbergia mexicana] gi|320090523|gb|ADW08533.1| ribosomal protein S3 [Muhlenbergia mexicana var. filiformis] gi|320090525|gb|ADW08534.1| ribosomal protein S3 [Muhlenbergia microsperma] gi|320090541|gb|ADW08542.1| ribosomal protein S3 [Muhlenbergia polycaulis] gi|320090543|gb|ADW08543.1| ribosomal protein S3 [Muhlenbergia porteri] gi|320090555|gb|ADW08549.1| ribosomal protein S3 [Muhlenbergia ramosa] gi|320090575|gb|ADW08559.1| ribosomal protein S3 [Muhlenbergia sobolifera] gi|320090579|gb|ADW08561.1| ribosomal protein S3 [Muhlenbergia spiciformis] gi|320090591|gb|ADW08567.1| ribosomal protein S3 [Muhlenbergia tenuiflora] gi|320090593|gb|ADW08568.1| ribosomal protein S3 [Muhlenbergia tenuifolia] gi|320090597|gb|ADW08570.1| ribosomal protein S3 [Muhlenbergia thurberi] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154344|gb|ADF83081.1| ribosomal protein S3 [Uniola condensata] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++++ P L+ K ++EK +K N N +++S+ +V +P T++A+ I Sbjct: 61 DTIHVLIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNISIEKVKEPYRQPTILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090451|gb|ADW08497.1| ribosomal protein S3 [Muhlenbergia distichophylla] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154102|gb|ADF82960.1| ribosomal protein S3 [Eustachys petraea] Length = 193 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090561|gb|ADW08552.1| ribosomal protein S3 [Muhlenbergia reverchonii] gi|320090569|gb|ADW08556.1| ribosomal protein S3 [Muhlenbergia sericea] gi|320090617|gb|ADW08580.1| ribosomal protein S3 [Muhlenbergia x involuta] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNKRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154188|gb|ADF83003.1| ribosomal protein S3 [Blepharoneuron shepherdii] gi|320090411|gb|ADW08477.1| ribosomal protein S3 [Blepharoneuron shepherdii] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKAVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154176|gb|ADF82997.1| ribosomal protein S3 [Astrebla squarrosa] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNXKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154434|gb|ADF83126.1| ribosomal protein S3 [Lopholepis ornithocephala] gi|295154466|gb|ADF83142.1| ribosomal protein S3 [Perotis rara] gi|295154470|gb|ADF83144.1| ribosomal protein S3 [Perotis hordeiformis] gi|295154472|gb|ADF83145.1| ribosomal protein S3 [Perotis hildebrandtii] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090493|gb|ADW08518.1| ribosomal protein S3 [Muhlenbergia implicata] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154074|gb|ADF82946.1| ribosomal protein S3 [Chloris virgata] gi|295154076|gb|ADF82947.1| ribosomal protein S3 [Chloris virgata] gi|295154082|gb|ADF82950.1| ribosomal protein S3 [Chloris barbata] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKNIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154056|gb|ADF82937.1| ribosomal protein S3 [Chaboissaea subbiflora] gi|295154122|gb|ADF82970.1| ribosomal protein S3 [Chaboissaea ligulata] gi|295154214|gb|ADF83016.1| ribosomal protein S3 [Chaboissaea atacamensis] gi|295154324|gb|ADF83071.1| ribosomal protein S3 [Schedonnardus paniculatus] gi|295154366|gb|ADF83092.1| ribosomal protein S3 [Redfieldia flexuosa] gi|295154404|gb|ADF83111.1| ribosomal protein S3 [Muhlenbergia arenacea] gi|295154430|gb|ADF83124.1| ribosomal protein S3 [Lycurus setosus] gi|295154432|gb|ADF83125.1| ribosomal protein S3 [Lycurus setosus] gi|295154484|gb|ADF83151.1| ribosomal protein S3 [Muhlenbergia flaviseta] gi|295154500|gb|ADF83159.1| ribosomal protein S3 [Muhlenbergia uniflora] gi|320090431|gb|ADW08487.1| ribosomal protein S3 [Muhlenbergia asperifolia] gi|320090447|gb|ADW08495.1| ribosomal protein S3 [Muhlenbergia cuspidata] gi|320090459|gb|ADW08501.1| ribosomal protein S3 [Muhlenbergia durangensis] gi|320090467|gb|ADW08505.1| ribosomal protein S3 [Muhlenbergia fastigiata] gi|320090497|gb|ADW08520.1| ribosomal protein S3 [Muhlenbergia jaime-hintonii] gi|320090537|gb|ADW08540.1| ribosomal protein S3 [Muhlenbergia palmirensis] gi|320090559|gb|ADW08551.1| ribosomal protein S3 [Muhlenbergia repens] gi|320090563|gb|ADW08553.1| ribosomal protein S3 [Muhlenbergia richardsonis] gi|320090599|gb|ADW08571.1| ribosomal protein S3 [Muhlenbergia torreyana] gi|320090601|gb|ADW08572.1| ribosomal protein S3 [Muhlenbergia uniflora] gi|320090603|gb|ADW08573.1| ribosomal protein S3 [Muhlenbergia utilis] gi|320090607|gb|ADW08575.1| ribosomal protein S3 [Muhlenbergia villiflora var. villosa] gi|320090615|gb|ADW08579.1| ribosomal protein S3 [Muhlenbergia wrightii] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154116|gb|ADF82967.1| ribosomal protein S3 [Eragrostiella leioptera] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++ + + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYILKNRKKSLNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K + N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVHSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154350|gb|ADF83084.1| ribosomal protein S3 [Triraphis ramosissima] gi|295154352|gb|ADF83085.1| ribosomal protein S3 [Triraphis purpurea] gi|295154354|gb|ADF83086.1| ribosomal protein S3 [Triraphis mollis] gi|295154356|gb|ADF83087.1| ribosomal protein S3 [Triraphis andropogonoides] gi|295154510|gb|ADF83164.1| ribosomal protein S3 [Neyraudia reynaudiana] Length = 193 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154104|gb|ADF82961.1| ribosomal protein S3 [Eustachys paspaloides] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSGNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154046|gb|ADF82932.1| ribosomal protein S3 [Eleusine indica] gi|295154398|gb|ADF83108.1| ribosomal protein S3 [Muhlenbergia emersleyi] gi|295154494|gb|ADF83156.1| ribosomal protein S3 [Muhlenbergia rigida] gi|295154496|gb|ADF83157.1| ribosomal protein S3 [Muhlenbergia rigens] gi|295154514|gb|ADF83166.1| ribosomal protein S3 [Muhlenbergia macroura] gi|320090417|gb|ADW08480.1| ribosomal protein S3 [Muhlenbergia angustata] gi|320090419|gb|ADW08481.1| ribosomal protein S3 [Muhlenbergia angustata] gi|320090423|gb|ADW08483.1| ribosomal protein S3 [Muhlenbergia argentea] gi|320090425|gb|ADW08484.1| ribosomal protein S3 [Muhlenbergia arizonica] gi|320090429|gb|ADW08486.1| ribosomal protein S3 [Muhlenbergia articulata] gi|320090437|gb|ADW08490.1| ribosomal protein S3 [Muhlenbergia capillaris] gi|320090439|gb|ADW08491.1| ribosomal protein S3 [Muhlenbergia caxamarcensis] gi|320090449|gb|ADW08496.1| ribosomal protein S3 [Muhlenbergia depauperata] gi|320090453|gb|ADW08498.1| ribosomal protein S3 [Muhlenbergia dubia] gi|320090455|gb|ADW08499.1| ribosomal protein S3 [Muhlenbergia dubia] gi|320090461|gb|ADW08502.1| ribosomal protein S3 [Muhlenbergia elongata] gi|320090465|gb|ADW08504.1| ribosomal protein S3 [Muhlenbergia expansa] gi|320090479|gb|ADW08511.1| ribosomal protein S3 [Muhlenbergia gigantea] gi|320090485|gb|ADW08514.1| ribosomal protein S3 [Muhlenbergia grandis] gi|320090487|gb|ADW08515.1| ribosomal protein S3 [Muhlenbergia gypsophila] gi|320090495|gb|ADW08519.1| ribosomal protein S3 [Muhlenbergia iridifolia] gi|320090499|gb|ADW08521.1| ribosomal protein S3 [Muhlenbergia jaliscana] gi|320090507|gb|ADW08525.1| ribosomal protein S3 [Muhlenbergia lindheimeri] gi|320090509|gb|ADW08526.1| ribosomal protein S3 [Muhlenbergia longiglumis] gi|320090511|gb|ADW08527.1| ribosomal protein S3 [Muhlenbergia longiligula] gi|320090513|gb|ADW08528.1| ribosomal protein S3 [Muhlenbergia lucida] gi|320090515|gb|ADW08529.1| ribosomal protein S3 [Muhlenbergia lucida] gi|320090519|gb|ADW08531.1| ribosomal protein S3 [Muhlenbergia maxima] gi|320090527|gb|ADW08535.1| ribosomal protein S3 [Muhlenbergia minutissima] gi|320090531|gb|ADW08537.1| ribosomal protein S3 [Muhlenbergia mucronata] gi|320090533|gb|ADW08538.1| ribosomal protein S3 [Muhlenbergia nigra] gi|320090535|gb|ADW08539.1| ribosomal protein S3 [Muhlenbergia palmeri] gi|320090545|gb|ADW08544.1| ribosomal protein S3 [Muhlenbergia pubescens] gi|320090547|gb|ADW08545.1| ribosomal protein S3 [Muhlenbergia pubescens] gi|320090549|gb|ADW08546.1| ribosomal protein S3 [Muhlenbergia pubigluma] gi|320090551|gb|ADW08547.1| ribosomal protein S3 [Muhlenbergia purpusii] gi|320090565|gb|ADW08554.1| ribosomal protein S3 [Muhlenbergia rigida] gi|320090567|gb|ADW08555.1| ribosomal protein S3 [Muhlenbergia robusta] gi|320090571|gb|ADW08557.1| ribosomal protein S3 [Muhlenbergia setifolia] gi|320090573|gb|ADW08558.1| ribosomal protein S3 [Muhlenbergia sinuosa] gi|320090577|gb|ADW08560.1| ribosomal protein S3 [Muhlenbergia speciosa] gi|320090583|gb|ADW08563.1| ribosomal protein S3 [Muhlenbergia stricta] gi|320090585|gb|ADW08564.1| ribosomal protein S3 [Muhlenbergia subaristata] gi|320090595|gb|ADW08569.1| ribosomal protein S3 [Muhlenbergia texana] gi|320090605|gb|ADW08574.1| ribosomal protein S3 [Muhlenbergia versicolor] gi|320090613|gb|ADW08578.1| ribosomal protein S3 [Muhlenbergia virletii] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154274|gb|ADF83046.1| ribosomal protein S3 [Sporobolus lasiophyllus] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K+ ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKEAIEELEKDIQKEVNSVNKRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKITGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154072|gb|ADF82945.1| ribosomal protein S3 [Chrysochloa hindsii] gi|295154160|gb|ADF82989.1| ribosomal protein S3 [Allolepis texana] gi|295154162|gb|ADF82990.1| ribosomal protein S3 [Allolepis texana] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154024|gb|ADF82921.1| ribosomal protein S3 [Zoysia macrantha] gi|295154026|gb|ADF82922.1| ribosomal protein S3 [Zoysia macrantha subsp. walshii] gi|295154028|gb|ADF82923.1| ribosomal protein S3 [Zoysia japonica] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIDLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154384|gb|ADF83101.1| ribosomal protein S3 [Triodia fitzgeraldii] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090457|gb|ADW08500.1| ribosomal protein S3 [Muhlenbergia dumosa] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKRSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154098|gb|ADF82958.1| ribosomal protein S3 [Gymnopogon grandiflorus] gi|295154154|gb|ADF82986.1| ribosomal protein S3 [Aeluropus lagopoides] gi|295154156|gb|ADF82987.1| ribosomal protein S3 [Aeluropus littoralis] gi|295154158|gb|ADF82988.1| ribosomal protein S3 [Aeluropus pungens] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154092|gb|ADF82955.1| ribosomal protein S3 [Willkommia texana] Length = 193 Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAKPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154062|gb|ADF82940.1| ribosomal protein S3 [Dasyochloa pulchella] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNKKIQSDSICEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKNIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090433|gb|ADW08488.1| ribosomal protein S3 [Muhlenbergia brevis] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECTKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154166|gb|ADF82992.1| ribosomal protein S3 [Aristida gypsophila] gi|295154168|gb|ADF82993.1| ribosomal protein S3 [Aristida scribneriana] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKGSNRKIEADSSSEVITDIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKNLQKEVNSVNQRLNIAIEKVKEPYRQPKILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154402|gb|ADF83110.1| ribosomal protein S3 [Muhlenbergia arenicola] gi|295154516|gb|ADF83167.1| ribosomal protein S3 [Muhlenbergia torreyi] gi|320090477|gb|ADW08510.1| ribosomal protein S3 [Muhlenbergia fragilis] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090463|gb|ADW08503.1| ribosomal protein S3 [Muhlenbergia eludens] gi|320090473|gb|ADW08508.1| ribosomal protein S3 [Muhlenbergia flavida] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154410|gb|ADF83114.1| ribosomal protein S3 [Muhlenbergia montana] gi|320090469|gb|ADW08506.1| ribosomal protein S3 [Muhlenbergia filiculmis] gi|320090505|gb|ADW08524.1| ribosomal protein S3 [Muhlenbergia jonesii] gi|320090529|gb|ADW08536.1| ribosomal protein S3 [Muhlenbergia montana] gi|320090553|gb|ADW08548.1| ribosomal protein S3 [Muhlenbergia quadridentata] gi|320090581|gb|ADW08562.1| ribosomal protein S3 [Muhlenbergia straminea] gi|320090609|gb|ADW08576.1| ribosomal protein S3 [Muhlenbergia virescens] gi|320090611|gb|ADW08577.1| ribosomal protein S3 [Muhlenbergia virescens] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSKGLQEDKKIRNCIKNYIEKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090517|gb|ADW08530.1| ribosomal protein S3 [Muhlenbergia majalcensis] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKEDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154442|gb|ADF83130.1| ribosomal protein S3 [Lepturus radicans] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLXEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154094|gb|ADF82956.1| ribosomal protein S3 [Hilaria cenchroides] gi|320090475|gb|ADW08509.1| ribosomal protein S3 [Muhlenbergia flexuosa] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIRGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090427|gb|ADW08485.1| ribosomal protein S3 [Muhlenbergia arsenei] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIKELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154426|gb|ADF83122.1| ribosomal protein S3 [Muhlenbergia peruviana] gi|320090443|gb|ADW08493.1| ribosomal protein S3 [Muhlenbergia crispiseta] Length = 193 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSKGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154416|gb|ADF83117.1| ribosomal protein S3 [Mosdenia phleoides] Length = 193 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAKPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090557|gb|ADW08550.1| ribosomal protein S3 [Muhlenbergia reederorum] Length = 193 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLNNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|320090421|gb|ADW08482.1| ribosomal protein S3 [Muhlenbergia annua] Length = 193 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVQEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154132|gb|ADF82975.1| ribosomal protein S3 [Eragrostis weberbaueri] Length = 193 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154290|gb|ADF83054.1| ribosomal protein S3 [Tetrapogon mossambicensis] Length = 193 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154136|gb|ADF82977.1| ribosomal protein S3 [Eragrostis tenuifolia] Length = 193 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HYSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|225024797|ref|ZP_03713989.1| hypothetical protein EIKCOROL_01684 [Eikenella corrodens ATCC 23834] gi|224942400|gb|EEG23609.1| hypothetical protein EIKCOROL_01684 [Eikenella corrodens ATCC 23834] Length = 126 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/101 (59%), Positives = 80/101 (79%) Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 + KPE++A +IA IAQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+ Sbjct: 1 IRKPELDAQVIADGIAQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARS 60 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 E Y EGRVPL TLRA ++Y T+ A T YG G+KV+V + Sbjct: 61 EWYREGRVPLHTLRAAVEYATSEAHTTYGVIGLKVWVYKGE 101 >gi|295154438|gb|ADF83128.1| ribosomal protein S3 [Lepturus schlechteri] Length = 193 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLPEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154054|gb|ADF82936.1| ribosomal protein S3 [Distichlis humilis] Length = 193 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+A+K+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAIKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154414|gb|ADF83116.1| ribosomal protein S3 [Muhlenbergia gigantea] Length = 193 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 +DY T Y Sbjct: 181 KMDYCCYPIRTIY 193 >gi|295154210|gb|ADF83014.1| ribosomal protein S3 [Austrochloris dichanthioides] Length = 193 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +H+++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLHIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T + Sbjct: 181 KIDYCCYPIRTIH 193 >gi|295154186|gb|ADF83002.1| ribosomal protein S3 [Blepharidachne bigelovii] Length = 193 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSIYEVITHIEIKKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DQIHVIIHIGLPNLLKKKGAIEELEKDIQKEVNSGNQRLNIAIEKVKEPYKQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154292|gb|ADF83055.1| ribosomal protein S3 [Swallenia alexandrae] Length = 193 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSIFEVITHIEIKKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|11466634|ref|NP_066317.1| ribosomal protein S3 [Malawimonas jakobiformis] gi|10178672|gb|AAG13684.1|AF295546_10 ribosomal protein S3 [Malawimonas jakobiformis] Length = 215 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 12/215 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--VAKILIE 58 MGQ IN L N W S+W+ + Y L+ED+ IR Y++ K K +I+ Sbjct: 1 MGQSINTTGLLLTHNKYWQSKWY-NDNNYIFSLYEDILIRNYIKNVFKNLNLFYGKCVIK 59 Query: 59 RTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV-----PKPEI 111 R+ + I +Y + II K +K++ + S L+ N + P Sbjct: 60 RSIQKIYIYINIYKKKRKNIINTKDKRKLINKKEIKQILQSLTKLTNNRIILIIKPTNIF 119 Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD--GVKVIASGRLNGAELSRTECYL 169 +A L+AQ I+++LE R F K+ + + G ++ SGR NG +++ + + Sbjct: 120 DAQLLAQYISRKLEIRNSFLSIFKKILNKINKNKKIYKGFRIQCSGRPNGNDMAYIQWFK 179 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G++PL T IDY A T YG G+KV++S Sbjct: 180 YGQIPLHTYNYKIDYAYTTALTKYGLSGVKVWLSF 214 >gi|295154480|gb|ADF83149.1| ribosomal protein S3 [Pappophorum pappiferum] Length = 193 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 I+Y T Y Sbjct: 181 KINYCCYPIRTIY 193 >gi|57230948|gb|AAW47232.1| ribosomal protein S3 [Columbia Basin potato purple top phytoplasma] Length = 173 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 4/172 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K I +Y+++ GLI G + + K+ N+ +I +++ EV A L+ Sbjct: 61 KKTNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKVVNKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESI 172 >gi|295154184|gb|ADF83001.1| ribosomal protein S3 [Blepharidachne benthamiana] Length = 193 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSIYEVITHIEIKKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K + N +++++ +V +P ++A+ I Sbjct: 61 DQIHVIIHIGLPNLLKKKGAIEELEKDIQKEVSSGNQRLNIAIEKVKEPYKQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|295154486|gb|ADF83152.1| ribosomal protein S3 [Munroa andina] gi|295154504|gb|ADF83161.1| ribosomal protein S3 [Munroa argentina] Length = 195 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 19/195 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNKKIESDSICEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAM--RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 A QL+ RV FR+AMK+A+ GVK+ +GRL G E++R EC +GR+PLQT+ Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKAEADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180 Query: 179 RAHIDYGTAVAETAY 193 RA IDY T Y Sbjct: 181 RAKIDYCCYPIRTIY 195 >gi|295154180|gb|ADF82999.1| ribosomal protein S3 [Bealia mexicana] Length = 195 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 +I++ P L+ K ++EK +K N N I +++ +V +P ++A+ Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIDIAIEKVKEPYRQPNILAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+ Sbjct: 121 YIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180 Query: 179 RAHIDYGTAVAETAY 193 RA IDY T Y Sbjct: 181 RAKIDYCCYPIRTIY 195 >gi|295154088|gb|ADF82953.1| ribosomal protein S3 [Dinebra retroflexa] Length = 192 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 17/189 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVA 189 IDY Sbjct: 181 KIDYCCYPI 189 >gi|295154190|gb|ADF83004.1| ribosomal protein S3 [Blepharoneuron tricholepis] Length = 195 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKAVNSVNRRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 A QL+ RV FR+AMK+A++ GVK+ +GRL G E++R EC +GR+PLQT+ Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKNKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180 Query: 179 RAHIDYGTAVAETAY 193 RA IDY T Y Sbjct: 181 RAKIDYCCYPIRTIY 195 >gi|295154318|gb|ADF83068.1| ribosomal protein S3 [Scleropogon brevifolius] Length = 195 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 19/195 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED+KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDIKIRNCIKNYIQKNSKKSSNRKIESDPSFEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118 + ++ P L+ K ++EK +K N N I +++ +V +P ++A+ Sbjct: 61 DTIHVRIHIGFPNLLNKKGAIEELEKDIQKEVNSVNQRLNIDIAIEKVKEPYRQPNILAE 120 Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 IA QL+ RV FR+AMK+A+ + GVK+ +GRL G +++R EC +GR+PLQT+ Sbjct: 121 FIAFQLKNRVSFRKAMKKAILLTKKTDIKGVKIKMAGRLGGRDIARAECIKKGRLPLQTI 180 Query: 179 RAHIDYGTAVAETAY 193 RA IDY T Y Sbjct: 181 RAKIDYCCYPIRTIY 195 >gi|239995006|ref|ZP_04715530.1| 30S ribosomal protein S3 [Alteromonas macleodii ATCC 27126] Length = 151 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 52/123 (42%), Positives = 84/123 (68%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG++ W S W+A ++Y L+ D ++R+YL LK A ++KI+IER Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLYNDHQVRQYLTKQLKNASLSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++ L+A SI Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNYVSKLAGVPAQINIAEVRKPELDGQLVADSI 120 Query: 121 AQQ 123 + Q Sbjct: 121 SSQ 123 >gi|295154108|gb|ADF82963.1| ribosomal protein S3 [Erioneuron nealleyi] gi|295154110|gb|ADF82964.1| ribosomal protein S3 [Erioneuron avenaceum] Length = 195 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSIFEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178 A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+ Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKTEADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180 Query: 179 RAHIDYGTAVAETAY 193 RA IDY T Y Sbjct: 181 RAKIDYCCYPIRTIY 195 >gi|313606535|gb|EFR83356.1| ribosomal protein S3 [Listeria monocytogenes FSL F2-208] Length = 108 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 51/108 (47%), Positives = 71/108 (65%) Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 +A L+A++IA+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG Sbjct: 1 DAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEG 60 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219 VPL TLRA IDY A+T YG G+KV++ + + + + + Sbjct: 61 TVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 108 >gi|217075320|gb|ACJ86020.1| unknown [Medicago truncatula] Length = 121 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 48/119 (40%), Positives = 76/119 (63%) Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146 + KK N +I+++ +P + ++A+ IA QL+ R+ FR+A+K+A++ A + G Sbjct: 1 MYKKNFNCVTRKINITSTRIPNAYSDPNILAEFIAGQLKNRISFRKAIKKAIELAEQAGT 60 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GV+V +GR++G E++R E EGRVPLQT+RA IDY + T YG GIKV++ L Sbjct: 61 KGVQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLN 119 >gi|116335052|ref|YP_802547.1| ribosomal protein S3 [Candidatus Carsonella ruddii PV] gi|123320755|sp|Q05FJ0|RS3_CARRP RecName: Full=30S ribosomal protein S3 gi|116235333|dbj|BAF35181.1| ribosomal protein S3 [Candidatus Carsonella ruddii PV] Length = 203 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 6/205 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+KINPILFRL N ++S W+ + L D+ IRE ++ + ++ I I + Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +Y + ++ ++S + + L+ V +NA IA ++ Sbjct: 61 -NKLTINLYINNVDQFNIIENY-LDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYNV 116 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Q+ + ++ +K + G K+ SGRL G +++R E L GR+PL T++ Sbjct: 117 VNQILNKNSIKKIIKE--ELLKNRKNFGCKIQISGRLEGVDIARKEWSLIGRIPLHTIKY 174 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +++Y T YG G+K+++ + Sbjct: 175 NLEYYQCETLTQYGILGVKIWLFKK 199 >gi|27734531|sp|Q9AIF9|RS3_CARRU RecName: Full=30S ribosomal protein S3 gi|13272304|gb|AAK17087.1|AF274444_17 ribosomal protein S3 [Candidatus Carsonella ruddii] Length = 203 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 6/205 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+KINPILFRL N ++S W+ + L D+ IRE ++ + ++ I I + Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +Y + ++ ++S + + L+ V +NA IA ++ Sbjct: 61 -NKLTINLYINNVDQFNIIENY-LDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYNV 116 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 Q+ + ++ +K + G K+ SGRL G +++R E L GR+PL T++ Sbjct: 117 VNQILNKNSIKKIIKE--ELLKNRKNFGCKIQISGRLEGVDIARKEWSLIGRIPLHTIKY 174 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205 +++Y T YG GIK+++ + Sbjct: 175 NLEYYQCETLTQYGILGIKIWLFKK 199 >gi|283050665|gb|ADB07764.1| ribosomal protein S3 [Leersia oryzoides] gi|283050669|gb|ADB07767.1| ribosomal protein S3 [Leersia perrieri] gi|283050673|gb|ADB07770.1| ribosomal protein S3 [Leersia hexandra] Length = 166 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 17/166 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 + I I++ +I++ P L+ K ++EK +K N N +++ V Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGV 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 +V +P ++A+ +A QL+ RV FR+AMK+A++ + GV Sbjct: 121 EKVKEPYRQPNILAEYMAFQLKNRVSFRKAMKKAIELTKKADIKGV 166 >gi|295154224|gb|ADF83021.1| ribosomal protein S3 [Brachyachne fibrosa] gi|295154506|gb|ADF83162.1| ribosomal protein S3 [Neesiochloa barbata] Length = 193 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 II++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHIIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 IDY T Y Sbjct: 181 KIDYCCYPIRTIY 193 >gi|253795621|ref|YP_003038717.1| putative 30S ribosomal subunit protein S3 [Candidatus Hodgkinia cicadicola Dsem] gi|253739929|gb|ACT34264.1| putative 30S ribosomal subunit protein S3 [Candidatus Hodgkinia cicadicola Dsem] Length = 226 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG K NPI RL V W FARG +Y ++ + K++ YL + G+ I++ Sbjct: 1 MGNKTNPIGVRLVVRGHWEDAVFARGRDYAEAVYLNHKVKAYLATRYRACGMISSAIKQE 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +++ + G +++ L + LSV + + IA + Sbjct: 61 GNAYVVVINTDDVDAFFASAGQSADEMADALKLWFWPDASLSVRRLDDAASHPVNIAFKL 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 + + ++K+ ++ + G+K +GR+ G ++++T ++EGR+PL TL A Sbjct: 121 MDDVATNSTVKASVKQMAKALVGTSVAGIKASYAGRIYGGDIAQTVWHIEGRIPLHTLAA 180 Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227 + Y + +T YG C +KV+V D S + A E + ++ Sbjct: 181 DVRYASVSTKTNYGVCNVKVWVCAND---PSAQPLEAQEAVQGQAEA 224 >gi|283050689|gb|ADB07782.1| ribosomal protein S3 [Potamophila parviflora] Length = 166 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 + I I++ +I++ P L+ K ++EK +K N N +++ + Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 +V +P +++A+ IA QL+ RV FR+AMK+A++ + GV Sbjct: 121 EKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGV 166 >gi|30519786|emb|CAD90760.1| ribosomal protein S3 [Orobanche minor] Length = 166 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52 M QKINP++FRLG +S WF + +Y L ED KIR ++ ++++ G+ Sbjct: 1 MAQKINPLVFRLGTTQNHHSLWFVQAKKYSESLQEDQKIRNLIKNYVQKKVSNSSDIEGI 60 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 A I I++ ++I++ P L+I IE+++ +K + N + ++++ + KP Sbjct: 61 APIEIKKRIDLIQVIIFMGFPKLLIESIPRGIEELQMNLQKEFHYVNRKFNIAITRITKP 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 N +IA+ IA QL RV FR+AMK+A++ + G++V SG Sbjct: 121 YRNPNIIAEFIANQLNNRVSFRKAMKKAIELTEQANTKGIQVQISG 166 >gi|289193197|ref|YP_003459138.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22] gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22] Length = 207 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88 + E++K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++ Sbjct: 6 FVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65 Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 +KL+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA Sbjct: 66 EKLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205 GV VI SG+L G E +RTE ++ G + A +D G A+A+T G G+ V + Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGIIGVTVKIMRP 184 Query: 206 DEVSDSDSTIPAAEHRVVEKD 226 D + + I E + V ++ Sbjct: 185 DVLLPDEIIIKDTEVKHVVEE 205 >gi|284117277|ref|ZP_06386735.1| 30S ribosomal protein S3 [Candidatus Poribacteria sp. WGA-A3] gi|283829505|gb|EFC33867.1| 30S ribosomal protein S3 [Candidatus Poribacteria sp. WGA-A3] Length = 120 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 88/121 (72%), Gaps = 1/121 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P FRLG TWNSRW+A ++ LLHED++IR+ ++ L AG++++ IER+ Sbjct: 1 MGQKTHPYGFRLGYTRTWNSRWYA-KKDFVKLLHEDVEIRQTVKSRLFHAGISRVEIERS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++I+Y+ARPG+IIG+KG +++K+R L E++++V E+ KPE++A L++++I Sbjct: 60 GNQVKVIIYTARPGIIIGRKGAEVDKLRAMLEQRYGREVYVTVKEIKKPELDAQLVSENI 119 Query: 121 A 121 A Sbjct: 120 A 120 >gi|110225705|ref|YP_665710.1| ribosomal protein S3 [Mesostigma viride] gi|17222576|gb|AAL36749.1|AF353999_29 ribosomal protein S3 [Mesostigma viride] Length = 210 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 21/217 (9%) Query: 1 MGQKINPILFRLGVN-CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA---KIL 56 MGQK NP R S W+ Y LL +D IR Y++ LK + KI Sbjct: 1 MGQKSNPQALRTAAPYQQHESCWY-HDKYYSHLLSQDFMIRSYIEKRLKGCFPSASAKIF 59 Query: 57 IERTHKNCRIIVYSARPGL--IIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + + K ++ ++S + KK DI KI KK SN T+ I ++ +A Sbjct: 60 LSSSPKELKLRIFSHGHLFLKRLKKKSYDISKILKKSSNTTSFSIQ--CYQIKNEYKSAL 117 Query: 115 LIAQSIAQQLERRVV-------FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 +A + Q ++R+ + F R + A G++V GR G+E +R + Sbjct: 118 FLANLLTQAIKRKKMMSLPSLLFLRTINEA-----SDFIKGIRVSCVGRFKGSERTRKKK 172 Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + G L T I+Y + T+YG+ G+KV+V Sbjct: 173 FQWGSTSLHTFSEKIEYSSQSISTSYGTFGVKVWVCY 209 >gi|304368151|gb|ADM26722.1| ribosomal protein S3 [Iranian niger seed phyllody phytoplasma] gi|304368167|gb|ADM26734.1| ribosomal protein S3 [Iranian onion phytoplasma] gi|313493482|gb|ADR57116.1| ribosomal protein S3 [Iranian carrot phytoplasma] Length = 129 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 92 >gi|84490556|gb|ABC59045.1| ribosomal protein S3 [Vietnam chinaberry yellows phytoplasma] Length = 129 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92 >gi|261402351|ref|YP_003246575.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7] gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7] Length = 206 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 7/193 (3%) Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88 + E +K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++ Sbjct: 6 FVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65 Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 + L+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA Sbjct: 66 ETLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVMNAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205 GV VI SG+L G E +RTE ++ G + A +D G+A+A+T G G+ V + Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGSAIAKTKPGVIGVTVKIMRP 184 Query: 206 DEVSDSDSTIPAA 218 D + + I Sbjct: 185 DVLLPDEIIIKDT 197 >gi|283050677|gb|ADB07773.1| ribosomal protein S3 [Leersia tisserantii] Length = 156 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 17/156 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60 Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103 + I I++ +I++ P L+ K ++EK +K N N +++ + Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGI 120 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 +V +P ++A+ IA QL+ RV FR+AMK+A++ Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIE 156 >gi|300117006|dbj|BAJ10670.1| ribosomal protein S3 [Mulberry dwarf phytoplasma] gi|300117009|dbj|BAJ10672.1| ribosomal protein S3 [Water dropwort witches'-broom phytoplasma] gi|304368159|gb|ADM26728.1| ribosomal protein S3 [Iranian onion phytoplasma] gi|307219179|dbj|BAJ19097.1| ribosomal protein S3 [Porcelain vine witches'-broom phytoplasma] gi|313493486|gb|ADR57119.1| ribosomal protein S3 [Iranian tomato phytoplasma] Length = 129 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92 >gi|304368155|gb|ADM26725.1| ribosomal protein S3 [Iranian lettuce phytoplasma] gi|304368163|gb|ADM26731.1| ribosomal protein S3 [Iranian prickly lettuce phytoplasma] gi|313493490|gb|ADR57122.1| ribosomal protein S3 ['Gaillardia x grandiflora' phytoplasma] gi|313493494|gb|ADR57125.1| ribosomal protein S3 ['Callistephus chinensis' phytoplasma] Length = 129 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMSFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92 >gi|295154268|gb|ADF83043.1| ribosomal protein S3 [Ctenium cirrhosum] Length = 193 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 II++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHIIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180 Query: 181 HIDYGTAVAETAY 193 I Y T Y Sbjct: 181 KIYYCCYPIRTIY 193 >gi|283050697|gb|ADB07788.1| ribosomal protein S3 [Chikusichloa mutica] Length = 181 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSDVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|84490559|gb|ABC59047.1| ribosomal protein S3 [Helianthus debilis little leaf phytoplasma] gi|84490562|gb|ABC59049.1| ribosomal protein S3 [Dogfennel yellows phytoplasma] gi|84490568|gb|ABC59053.1| ribosomal protein S3 [Ragweed yellows phytoplasma] Length = 129 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 92 >gi|283050649|gb|ADB07752.1| ribosomal protein S3 [Oryza brachyantha] Length = 181 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRVNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3P [Methanocaldococcus jannaschii DSM 2661] gi|1710763|sp|P54034|RS3_METJA RecName: Full=30S ribosomal protein S3P gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM 2661] Length = 208 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 7/195 (3%) Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88 + E++K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++ Sbjct: 6 FVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65 Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 + L+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA Sbjct: 66 ETLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205 GV VI SG+L G E +RTE ++ G + A +D G A+A+T G G+ V + Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIMRP 184 Query: 206 DEVSDSDSTIPAAEH 220 D + + I Sbjct: 185 DVLLPDEIIIKEDAE 199 >gi|84490565|gb|ABC59051.1| ribosomal protein S3 [Florida periwinkle virescence phytoplasma] Length = 129 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 47/92 (51%), Positives = 62/92 (67%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 +A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A IDY A T YG GIKV++ + + Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGR 92 >gi|38638299|ref|NP_943674.1| ribosomal protein S3 [Chara vulgaris] gi|32966613|gb|AAP92196.1| ribosomal protein S3 [Chara vulgaris] Length = 270 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 98/270 (36%), Gaps = 67/270 (24%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53 M QK+NPI RL VN + +S WF+ YG LL++DL IREY G Sbjct: 1 MAQKVNPISVRLNVNRSPDSCWFSDYY-YGELLYQDLNIREYFGSIRPPMGAQVFGFRPG 59 Query: 54 KILIERTHKNCRIIVYSARPGLIIGK---KGTDIEKIRKKLSNMTNSEIHLSVNEVPK-- 108 + +I K I ++ L K K ++ K + + + + Sbjct: 60 RCVIHHFPKRTLIHLFFLSRTLQKSKTNPKNRSFDQSSKLIKHAIDYFVMQYFFYAKNRL 119 Query: 109 ----------------------PEINATL---------------------------IAQS 119 P A Sbjct: 120 KFDPASALIGFVCQKESYVRFAPGRYFYFAFLQSLLSSRAKTHTVIRPLKVASVYQSASL 179 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRF-----GADGVKVIASGRLNGAELSRTECYLEGRVP 174 IAQ++ ++ + + ++ +S + G+++ SGR NGAE+++TEC G+ Sbjct: 180 IAQEICNKLEQKTSFRQICRSIFQQIEKCNYVKGIRISCSGRNNGAEIAKTECRKYGQTS 239 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 L IDY A A T YG G+KV+VS Sbjct: 240 LHVFSDKIDYAQAQASTPYGILGVKVWVSY 269 >gi|296109315|ref|YP_003616264.1| ribosomal protein S3 [Methanocaldococcus infernus ME] gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME] Length = 211 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 7/194 (3%) Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88 + E++K I E+ + L +AG + I++T ++ +Y+ RPG +IG++G+ I+++ Sbjct: 6 FIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIKELT 65 Query: 89 KKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 + L+ + V V P+++A ++A+ IA+ LER + FRR AV+ M GA Sbjct: 66 EILAKEFKLDRPQIDVKPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVMNAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205 GV VI SG+L G E +RTE ++ G + A +D G A+A T G G+ V + Sbjct: 126 GVVVIISGKLTG-ERARTEKFMAGYMKHCGEPAEDLVDKGRAIALTKPGVIGVTVKIMRP 184 Query: 206 DEVSDSDSTIPAAE 219 D + + I + Sbjct: 185 DVLLPDEIVIKEKD 198 >gi|283050605|gb|ADB07719.1| ribosomal protein S3 [Oryza rufipogon] gi|283050609|gb|ADB07722.1| ribosomal protein S3 [Oryza glaberrima] gi|283050613|gb|ADB07725.1| ribosomal protein S3 [Oryza meridionalis] gi|283050621|gb|ADB07731.1| ribosomal protein S3 [Oryza malampuzhaensis] gi|283050629|gb|ADB07737.1| ribosomal protein S3 [Oryza punctata] gi|283050633|gb|ADB07740.1| ribosomal protein S3 [Oryza rhizomatis] gi|283050637|gb|ADB07743.1| ribosomal protein S3 [Oryza latifolia] Length = 181 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|256810641|ref|YP_003128010.1| ribosomal protein S3 [Methanocaldococcus fervens AG86] gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86] Length = 207 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 4/184 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 L I EY + L +AG + I +T +I +Y+ +PG +IG++G+ I ++ K L+ Sbjct: 14 LLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIRELTKTLAEEFG 73 Query: 97 SE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA GV VI SG Sbjct: 74 VEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAKGVIVIISG 133 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L G E +RTE ++ G + A +D G A+A+T G G+ V + D + + Sbjct: 134 KLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIMRPDVLLPDEI 192 Query: 214 TIPA 217 I Sbjct: 193 IIKD 196 >gi|283050661|gb|ADB07761.1| ribosomal protein S3 [Oryza neocaledonica] Length = 180 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 32/180 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNNEMDSGSSSEVITHIEIQKEIDPIHVIIHIGFPNLLKKKGPIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ I QL+ R+ FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYKQPNILAEYITFQLKNRISFRKAMKKALELTKKTDIKG 180 >gi|283050681|gb|ADB07776.1| ribosomal protein S3 [Maltebrunia letestui] Length = 181 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++K+ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIKKNRKKSSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|283050701|gb|ADB07791.1| ribosomal protein S3 [Zizania aquatica] Length = 181 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSNSEVITHNRKMDSGSSSEVITHIEIKKEIDTIHVIIHIGFPNLLKRKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|283050729|gb|ADB07812.1| ribosomal protein S3 [Ehrharta erecta] Length = 177 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKGT-DIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKTDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIGELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050733|gb|ADB07815.1| ribosomal protein S3 [Phyllostachys aurea] Length = 177 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050721|gb|ADB07806.1| ribosomal protein S3 [Zizaniopsis villanensis] Length = 177 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITQIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050693|gb|ADB07785.1| ribosomal protein S3 [Chikusichloa aquatica] Length = 176 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 32/175 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSDVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKK 175 >gi|283050645|gb|ADB07749.1| ribosomal protein S3 [Oryza coarctata] Length = 177 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKKMDSGPSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177 >gi|215444831|ref|ZP_03431583.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T85] gi|289756795|ref|ZP_06516173.1| ribosomal protein S3 [Mycobacterium tuberculosis T85] gi|289712359|gb|EFD76371.1| ribosomal protein S3 [Mycobacterium tuberculosis T85] Length = 152 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%) Query: 126 RRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184 RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLRA IDY Sbjct: 3 NRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRADIDY 62 Query: 185 GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G A+T +G G+KV++ D V Sbjct: 63 GLYEAKTTFGRIGVKVWIYKGDIVGGKREL 92 >gi|283050705|gb|ADB07794.1| ribosomal protein S3 [Zizania latifolia] Length = 177 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKRKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050657|gb|ADB07758.1| ribosomal protein S3 [Oryza granulata] Length = 177 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKEMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYKQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177 >gi|283050725|gb|ADB07809.1| ribosomal protein S3 [Hygroryza aristata] Length = 177 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSNSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050617|gb|ADB07728.1| ribosomal protein S3 [Oryza punctata] Length = 177 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177 >gi|283050709|gb|ADB07797.1| ribosomal protein S3 [Rhynchoryza subulata] Length = 177 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|283050641|gb|ADB07746.1| ribosomal protein S3 [Oryza australiensis] Length = 177 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177 >gi|283050625|gb|ADB07734.1| ribosomal protein S3 [Oryza officinalis] Length = 178 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177 >gi|289597187|ref|YP_003483883.1| ribosomal protein S3 [Aciduliprofundum boonei T469] gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469] Length = 237 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 10/203 (4%) Query: 31 ALLHED---LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 + E+ L ++EYL AG + I+RT RII+ RPG++IG+KG I+++ Sbjct: 5 KFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIKEL 64 Query: 88 RKKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146 KL + V E P P +NA ++AQ +A LER FRRA ++ M GA Sbjct: 65 TDKLQQDFGVENPTIEVKESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIMEAGA 124 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH-IDYGTAVAETAYGSCGIKVYVSLR 205 G ++I SG+L G + +RTE +++G + + G A A+T G G+ V + Sbjct: 125 KGAQIIISGKLTG-DRARTEKFMDGTIKYNGKPVELVRMGYATAKTKPGIIGVTVKIMPP 183 Query: 206 DEVSDSD----STIPAAEHRVVE 224 D + + A E +V E Sbjct: 184 DAKLPDEVNILPPVEAEEEKVNE 206 >gi|215444830|ref|ZP_03431582.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T85] Length = 113 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 1/114 (0%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKTRSRKRN 113 >gi|194033317|ref|YP_002000403.1| ribosomal protein S3 [Oedogonium cardiacum] gi|156619062|gb|ABU88209.1| ribosomal protein S3 [Oedogonium cardiacum] gi|186968934|gb|ACC97257.1| ribosomal protein S3 [Oedogonium cardiacum] Length = 596 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 15/191 (7%) Query: 26 GSEYGALLHEDLK----------IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGL 75 Y EDLK +++ ++ ++ + +L KN + Sbjct: 406 KKNYHKKQIEDLKKNEVKKENIKLKKVVKRKIQNFMIDNLLKNNVSKNSE----CYKLSS 461 Query: 76 IIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135 I K + + L N + + EV +P A +A I Q+LE+R FR MK Sbjct: 462 IYQAKVFEDLIKQLALRNSFPKISAIEIIEVKQPSEYAVCLAYFITQKLEKRFSFRSIMK 521 Query: 136 RAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +A + A++ + G+K+ SGRLNGAE++RTE EGRVPLQTL A +DY A+T YG Sbjct: 522 QAKRVAIQTSSVKGIKIQLSGRLNGAEIARTEWIREGRVPLQTLEADVDYSYKTAQTLYG 581 Query: 195 SCGIKVYVSLR 205 G+KV+V + Sbjct: 582 IIGVKVWVFRK 592 Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 32/56 (57%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQKI+P+ FR+G+ ++WFA +Y + ED+ +R+ L + + ++ Sbjct: 1 MGQKIHPLGFRVGITKKHKAKWFANSDQYPQYILEDILLRKRLTSLIAPESLPRVF 56 >gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219] gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219] Length = 314 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 8/202 (3%) Query: 31 ALLHEDLKIR----EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 ED ++ EY L +AG + I RT +I+VYS +PG++IGK G I K Sbjct: 5 KKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIRK 64 Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 + + + + N + EV +PE+NA ++A +A +ER FR+A A+++ M G Sbjct: 65 LTRDVGRLYNLDNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIMNSG 124 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVS 203 A G ++I SG++ GA SR E + G + +D G AVA G+ G KV + Sbjct: 125 ALGCEIILSGKVTGA-RSRVEKMVNGYIKHAGKPVDDIVDEGFAVAVKKLGTIGCKVRII 183 Query: 204 LRDEVSDSDSTIPAAEHRVVEK 225 V + V + Sbjct: 184 HPGAVLPDSYHLKEIVEEAVAE 205 >gi|295154022|gb|ADF82920.1| ribosomal protein S3 [Willkommia annua] Length = 179 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 17/179 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKDYIQKNRKKSSNRKIESGSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+R Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIR 179 >gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [uncultured methanogenic archaeon RC-I] gi|121687826|sp|Q0W1Y3|RS3_UNCMA RecName: Full=30S ribosomal protein S3P gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [uncultured methanogenic archaeon RC-I] Length = 279 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 7/193 (3%) Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 + E K + EY L++AG + I RT +I + + +PG+IIGK G I + Sbjct: 5 KKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIRR 64 Query: 87 IRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 K++ + V EV KPE+NA ++A +A LER FR+A + +Q M G Sbjct: 65 YTKEMDMRFKMDNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIMDSG 124 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203 A G +VI +G+L GA R E ++ G + + + +D G A A+ G G+KV + Sbjct: 125 AMGCEVIIAGKLTGA-RKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKVRIM 183 Query: 204 LRDEVSDSDSTIP 216 + V TI Sbjct: 184 PPEAVLPDQITIE 196 >gi|301500964|ref|YP_003795429.1| ribosomal protein S3 [Alveolata sp. CCMP3155] gi|300069510|gb|ADJ66617.1| ribosomal protein S3 [Chromerida sp. RM11] Length = 247 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 46/248 (18%) Query: 1 MGQKINPILFRLG-VNCTWNSRWFAR-------GSEYGALLHEDLKIREYLQCHLKQAGV 52 MGQKINP+ R VN + W+A S+Y LH D +R+ +Q + Sbjct: 1 MGQKINPVGLRAKLVNRS--GGWYAPLSSKFKLSSDYANKLHTDFALRQAVQSLATSLDL 58 Query: 53 AKILIERT-HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--------------- 96 ++ + T + ++ P + + + +++ Sbjct: 59 VQVKVFLTQSNRLILTLFLPYPDYLYMNLSPRVHPTITQTFKISHASNLKESLKTLLDWP 118 Query: 97 ---------------SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 + + + V +A +I L++RV RRA+K Q+A Sbjct: 119 RNLQVRLRARKIFLSQPVSVQIKLVKASYHRPDFLATAIQASLQKRVAIRRAVKLWAQTA 178 Query: 142 MRFGADGVKVI-----ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 + +V SGRLN AE++ +E G+V L T+ A +DY T+ G Sbjct: 179 LNQKVGSFRVQGVRVRLSGRLNNAEMASSEQLSFGKVSLHTISAPVDYCCRHYRTSSGVL 238 Query: 197 GIKVYVSL 204 GIKV+V+ Sbjct: 239 GIKVWVAR 246 >gi|223927431|gb|ACN23343.1| ribosomal protein S3 [Halimeda gracilis] Length = 158 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 6/161 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 I Q LE+RV ++ + G+K+ SGRLNG+ Sbjct: 118 IVQNLEKRVPYKLIF--VLLKKHFKIDFGMKIQISGRLNGS 156 >gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303] gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303] Length = 307 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EI 99 EY L +AG + I RT +I +Y+ +PG++IGK G I K+ + + + N Sbjct: 19 EYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIRKLTRDVDKLYNMDNP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + EV PE+NA ++A +A +ER FR+A A+++ M GA G ++I SG+L G Sbjct: 79 QIDAQEVKTPELNAQMMATRLAASIERGWYFRKAGHNAIRAIMGAGALGCEIIMSGKLTG 138 Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 +R E + G + +D G A A G+ G KV + D V Sbjct: 139 P-RARVEKLVRGYIKHAGKPVDDIVDEGFATAVKKLGTIGCKVRIIHPDAVLPD 191 >gi|38426850|gb|AAR20471.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 140 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 4/140 (2%) Query: 5 INPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER----T 60 NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R T Sbjct: 1 TNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRLKEKT 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +++A+PG+IIGK G KI+ L +T +I+L++ EV P+ A L+AQ++ Sbjct: 61 KNRITITIHTAKPGIIIGKDGETRNKIQAPLKKLTQKDINLNILEVKNPDKTAVLVAQNM 120 Query: 121 AQQLERRVVFRRAMKRAVQS 140 A+QLE R+ FRR K A+Q Sbjct: 121 AEQLENRMKFRRVQKMAIQK 140 >gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3P [Methanosarcina barkeri str. Fusaro] gi|91207819|sp|Q46GA1|RS3_METBF RecName: Full=30S ribosomal protein S3P gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro] Length = 311 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 11/197 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EY L +AG + + RT +I++YS +PG++IGK G I K+ + ++ N Sbjct: 19 EYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVAARYNLENP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + EV KPE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G Sbjct: 79 QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138 Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-----D 212 A SR E +++G + + +D G AVA G+ G KV + V + Sbjct: 139 A-RSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRIIQPGVVLPDSYTTTE 197 Query: 213 STIPAAE--HRVVEKDS 227 + P E + EK + Sbjct: 198 PSEPVTEPVEKPAEKPA 214 >gi|38426852|gb|AAR20472.1| ribosomal protein S3 [Candidatus Phytoplasma australiense] Length = 142 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 84/140 (60%), Gaps = 4/140 (2%) Query: 7 PILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER----THK 62 P RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R T Sbjct: 3 PNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRLKEKTKN 62 Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122 I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+AQ++A+ Sbjct: 63 RITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLVAQNMAE 122 Query: 123 QLERRVVFRRAMKRAVQSAM 142 QLE R+ FRR K A+Q A Sbjct: 123 QLENRMKFRRVQKMAIQKAF 142 >gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304] gi|6094176|sp|O28360|RS3_ARCFU RecName: Full=30S ribosomal protein S3P gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304] Length = 229 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 8/203 (3%) Query: 31 ALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 + E LK ++E+++ ++ AG + I RT ++ ++ RPGL+IGK G I+ + Sbjct: 6 KFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIKAL 65 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 +KL + +SV+EV KPE NA L+A +A+ LER FRRA R + M GA Sbjct: 66 TEKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIMEAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLR---AHIDYGTAVAETAYGSCGIKVYVSL 204 G ++ SG+L +E +RTE ++ G + + T + + G +A G G+ V + Sbjct: 126 GCEIEISGKLV-SERARTEKFVAGTI-VHTGDPAESMVQKGFDIAIKKLGVLGVSVRIIP 183 Query: 205 RDEVSDSDSTIPAAEHRVVEKDS 227 D + + + +S Sbjct: 184 PDVTLPDEFEVKDVNIEHLRGES 206 >gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein [uncultured marine microorganism HF4000_ANIW141A21] Length = 214 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 4/194 (2%) Query: 36 DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 D I EYL+ +++ AG I + RI +Y +PGL+IG++G I ++ + L + Sbjct: 8 DSGIDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIF 67 Query: 96 N-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 + +SV EV PE NA ++ +AQ + R FRRA V + MR GA G ++I + Sbjct: 68 ELQNLQISVFEVEIPEQNARIMCNRVAQTVARGTAFRRAAMWTVNAIMRSGALGAEIIIA 127 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G+L +E S TE Y +G VP A + + + G GI+V +++RD V Sbjct: 128 GKLR-SERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAIRDMVPPDM 186 Query: 213 STIPAAEHRVVEKD 226 I E EK+ Sbjct: 187 ELIKDIEKERSEKE 200 >gi|298489091|ref|ZP_07007113.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156403|gb|EFH97501.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 135 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 44/89 (49%), Positives = 58/89 (65%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R Sbjct: 29 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRP 88 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK 89 + RI +++ARPG++IGKKG D+EK Sbjct: 89 AQTARITIHTARPGIVIGKKGEDVEKTAS 117 >gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote KM3-130-D10] Length = 367 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 E +REYL ++AG + RT + ++ + + + G +IG++G I +++++L N Sbjct: 16 ERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHELQRRLQND 75 Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 HL V EV + ++A ++A +A LER FRRA Q+ M GA G VI Sbjct: 76 FILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLVIL 135 Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SG++ G R E + +G + +T +D G + A G+ G V + Sbjct: 136 SGKITGP-RHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRIMRPGVKLPH 194 Query: 212 DSTI 215 + TI Sbjct: 195 EITI 198 >gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3P [Methanosarcina mazei Go1] gi|27734502|sp|Q8PV44|RS3_METMA RecName: Full=30S ribosomal protein S3P gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1] Length = 307 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EY L +AG + + RT +II+YS +PG++IGK G I K+ + ++ N Sbjct: 19 EYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIRKLTRDVATKYNLENP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + EV KPE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G Sbjct: 79 QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVMNAGALGCEVVISGKLTG 138 Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS------ 211 A SR E +++G + + +D G AVA G+ G KV + V Sbjct: 139 A-RSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVRIIQPGVVLPDSYKVRE 197 Query: 212 ----DSTIPAAEHRVVEKDS 227 + + VEK + Sbjct: 198 SVEIEEPAEKPAEKQVEKPA 217 >gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242] gi|121687004|sp|Q12ZU5|RS3_METBU RecName: Full=30S ribosomal protein S3P gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242] Length = 304 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 4/183 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EY L +AG + I RT +I VY+ +PG++IGK G I K+ + + + + Sbjct: 19 EYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIRKLTRDVDRLYDLDNP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + EV +PE+NA ++A +A +ER FR+A +++ M GA G +++ SG+L G Sbjct: 79 QIDAQEVKRPELNAQMMASRLASSIERGWYFRKAGHNTMRAVMNAGALGCEIVISGKLTG 138 Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 + SR E + G + +D G A A G+ G KV + D V + Sbjct: 139 S-RSRVEKMVNGYIKHAGKPVDDIVDDGFATAVKKLGTLGCKVRIIHPDAVLPDSYRLKN 197 Query: 218 AEH 220 AE Sbjct: 198 AEE 200 >gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 258 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 4/189 (2%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN- 93 E +REYL ++AG + RT +I + + + G +IG++G I ++ +L N Sbjct: 16 ERQLVREYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRGKVIHELSARLKND 75 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 HL V EV +P +NA ++A ++ LER FRRA Q M GA G V+ Sbjct: 76 FFLDRPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTAQQIMDAGARGCLVVL 135 Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SG++ GA R E + +G + +T +D G + A G+ G V + D Sbjct: 136 SGKITGA-RHRVEKFQQGHIKFCGETALEFMDIGFSTAVKKLGTIGCTVRIMRPDAKLPH 194 Query: 212 DSTIPAAEH 220 + I Sbjct: 195 EIIITERAD 203 >gi|283050713|gb|ADB07800.1| ribosomal protein S3 [Luziola fluitans] Length = 181 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 32/181 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ II++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITRIEIQKEIDTIHIIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIEFTKKADIKG 180 Query: 149 V 149 V Sbjct: 181 V 181 >gi|167945359|ref|ZP_02532433.1| 30S ribosomal protein S3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 102 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 44/96 (45%), Positives = 64/96 (66%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P RLG+ W S+W+A Y LL+ DL +R++L+ L QA V++I I+R Sbjct: 1 MGQKVHPTGIRLGIVKDWTSKWYADSKHYADLLNNDLSVRDFLKKRLYQASVSRIQIDRP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 KN I V++ARPGL+IGKKG I+ +R ++S M Sbjct: 61 AKNAHITVHTARPGLVIGKKGGHIDALRNEVSKMMG 96 >gi|312137081|ref|YP_004004418.1| ssu ribosomal protein s3p [Methanothermus fervidus DSM 2088] gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088] Length = 217 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 15/212 (7%) Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 + E LK I E+L+ L++AG + I+ T I +Y+ RPGL+IG+ G + + Sbjct: 4 KEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVRR 63 Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 + L + V EV PE+N ++A IA LER + FRR ++ M G Sbjct: 64 LTNILRKRFGLDNPQIEVKEVEVPELNPKIMAHRIASMLERGMHFRRVAYGTLRRIMAAG 123 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203 A G ++ SG++ GA + + + EG + + + G A A+ G G+ V + Sbjct: 124 AQGAEITISGKIRGA-RATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHVKIM 182 Query: 204 LRDEVSDSDSTIP--------AAEHRVVEKDS 227 + I + VE+ + Sbjct: 183 PPGVKLPDEIKIKKEALKETESKPEESVEEGA 214 >gi|115350016|ref|YP_764382.1| ribosomal protein S3 [Stigeoclonium helveticum] gi|122165165|sp|Q06SI4|RR3_STIHE RecName: Full=30S ribosomal protein S3, chloroplastic gi|98990230|gb|ABF60197.1| ribosomal protein S3 [Stigeoclonium helveticum] Length = 1126 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 3/165 (1%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 ++L + + L+ KN + S + + K + + L M + Sbjct: 956 KFLAKKTIKKKLKHFLVLMALKNNYTNLSSLKNIYDV-KTFAKLCENLTNLQTMPKVSV- 1013 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNG 159 + + +V +P+ A +A + + LE+R FR MKRA + AM G+K+ SGRLNG Sbjct: 1014 IELVKVHQPKQYAVCLANFVVENLEKRFSFRSTMKRASEQAMSTANVKGIKIQISGRLNG 1073 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 AE++RTE +G VPLQTLRA+IDY A+T YG G+KV++ Sbjct: 1074 AEIARTEWLRDGVVPLQTLRANIDYSYKTAKTIYGILGVKVWLFK 1118 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 36/72 (50%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P +R+G+ ++RWFA +Y + ED +R+ L +L + + E Sbjct: 1 MGQKIHPYGYRVGITQPHSARWFANTYQYPQYVFEDFLLRQSLFKNLPVENLPRKRTEDK 60 Query: 61 HKNCRIIVYSAR 72 + + + R Sbjct: 61 SETKLVQIKIER 72 >gi|295154340|gb|ADF83079.1| ribosomal protein S3 [Urochondra setulosa] Length = 175 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 17/175 (9%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PL Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLGGKEIARAECIKKGRLPL 175 >gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 259 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 4/184 (2%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 E +REYL ++AG + RT + ++ + + + G +IG++G I +++++L N Sbjct: 16 ERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHELQRRLQND 75 Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 HL V EV + ++A ++A +A LER FRRA Q+ M GA G VI Sbjct: 76 FILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLVIL 135 Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SG++ G R E + +G V +T +D G + A G+ G V + Sbjct: 136 SGKITGP-RHRVEKFQQGHVKFCGETALEFMDTGFSTAVKKLGTIGCTVKIMRPGVKLPH 194 Query: 212 DSTI 215 + I Sbjct: 195 EIDI 198 >gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE] gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE] Length = 292 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 5/189 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS-NMTN 96 I E+ L++AG + I RT +I + + +PG+IIGK G I K K L Sbjct: 16 MIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRKFTKDLDVRFKM 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EV +PE+NA ++A +A LER FR+A + +Q M GA GV+++ +G+ Sbjct: 76 DNPQIDVQEVKRPELNAQMMATRLANALERGWYFRKAGQSTLQRIMDSGAMGVEIVIAGK 135 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRD-EVSDSDS 213 L G RTE ++ G + + + +D G A A+ G G+KV + + D Sbjct: 136 LTGP-RKRTEKFIAGYIKHCGKPVEEFVDVGYARAKKKLGIIGVKVRIMPPGSVLPDHIE 194 Query: 214 TIPAAEHRV 222 +P + Sbjct: 195 VLPIKKEEA 203 >gi|58699232|ref|ZP_00374034.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila ananassae] gi|58534248|gb|EAL58445.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila ananassae] Length = 139 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 2/136 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG +NP FRL + TW+S W+A Y LH+DL IR Y+ K AGV+K++IERT Sbjct: 1 MGN-VNPKGFRLKIINTWSSIWYAE-KGYKQGLHQDLSIRSYINESFKHAGVSKVIIERT 58 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++S+RPG+IIGKKG+DIEKI++K++ + + ++V V + EI+A LI+ SI Sbjct: 59 IDLVSVIIHSSRPGVIIGKKGSDIEKIKQKIAEKVKNNVEVNVVGVKRSEIDAVLISNSI 118 Query: 121 AQQLERRVVFRRAMKR 136 AQQLE+RV FRRAMK+ Sbjct: 119 AQQLEKRVSFRRAMKK 134 >gi|157781646|gb|ABV72168.1| ribosomal protein S3 [Candidatus Phytoplasma omanense] Length = 158 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 4/158 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK NP RLG+ W S+W+A + L++ED +IR ++ + ++ I I+R Sbjct: 1 MGQKSNPNGLRLGIIRQWYSQWYAEDKQVPYLIYEDFRIRSLIKKFYNRGIISHIEIKRL 60 Query: 60 -THKNCRIIV--YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 N I + ++++ G++ G + + +K+ +K+ N ++ ++V EV + A+L+ Sbjct: 61 KKANNEEITIDLFTSKIGIVQGTEHKEQKKLLQKIEKEINKKVIINVFEVKAIDKIASLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 AQ+IA QL++R FR K Q ++ A GVK+I S Sbjct: 121 AQNIALQLQKRAYFRVVQKITAQKVLKSSAIGVKIIIS 158 >gi|23010683|ref|ZP_00051288.1| COG0092: Ribosomal protein S3 [Magnetospirillum magnetotacticum MS-1] Length = 99 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 58/99 (58%), Positives = 74/99 (74%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 H+ CR+ ++S RPG++IGKKG DIEK+RK + MT ++ Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKDDV 99 >gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 307 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKL 91 E +REYL ++AG + RT + ++ + + + G +IG++G I +++ K Sbjct: 17 ERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQYRLKSD 76 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 + N + ++ E+ +P +NA ++A +A LER FRRA Q+ M GA G + Sbjct: 77 FKLENPRLEVN--EIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLI 134 Query: 152 IASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 I SG+++G R + + +G + +T +D G + A G+ G V + Sbjct: 135 ILSGKISGP-RHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIMRPGVKL 193 Query: 210 DSDSTI 215 + I Sbjct: 194 PHEIDI 199 >gi|207110534|ref|ZP_03244696.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_CA4C1] Length = 98 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 45/78 (57%), Positives = 59/78 (75%) Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE 190 RRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA IDYG A A Sbjct: 1 RRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRAKIDYGFAEAM 60 Query: 191 TAYGSCGIKVYVSLRDEV 208 T YG G+KV++ + + Sbjct: 61 TVYGIIGVKVWIFKGEVL 78 >gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21] gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21] Length = 299 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 7/204 (3%) Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 + E LK I EYL+ L++AG + I+ T ++VY+ RPG++IG+ G + Sbjct: 4 KDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVRS 63 Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 I + L + V EV PE+N ++A IA L+R + FRR A++ M G Sbjct: 64 ITQNLKTGYGLENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTALRRIMGAG 123 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203 A GV+V SG++ G+ + + +G + + + +G A + G GI V + Sbjct: 124 AQGVEVTISGKIRGSRSAC-AKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINVRIM 182 Query: 204 LRDEVSDSDSTIPAAEHRVVEKDS 227 D V I E E ++ Sbjct: 183 PPDVVLPDKVDILQIEVEKPETEN 206 >gi|222480851|ref|YP_002567088.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239] gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239] Length = 312 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 10/199 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + + Sbjct: 16 QINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFDM 75 Query: 98 E-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 DDPQIDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS--- 211 + GA SR E + G + A +D+G VA G+ G+ V + Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGVNVKIIPPGAQLPDDFD 194 Query: 212 ---DSTIPAAEHRVVEKDS 227 D+ +P E V+ D+ Sbjct: 195 IREDADVPEVEQAAVDVDA 213 >gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1] gi|152060874|sp|A3CT03|RS3_METMJ RecName: Full=30S ribosomal protein S3P gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1] Length = 234 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 10/196 (5%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMT 95 +++ ++L LK+AG + I RT ++ +++ +PG++IGK G + ++ + ++ Sbjct: 15 VRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVRQLTQDLATDYD 74 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + V +V P NA ++A+ +A LER FR+A ++ M GA G +VI +G Sbjct: 75 IESPQVEVQQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAG 134 Query: 156 RLNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 +L G+ SRT+ + EG + P +T+ ++ G A+A G+ G++V + D Sbjct: 135 KLTGS-RSRTQKFTEGYIKHCGEPSETI---VEKGYALAIKKLGTIGVQVKIVPPDARLP 190 Query: 211 SDSTIPAAEHRVVEKD 226 + E + + Sbjct: 191 DAFDVLEPEPKKAPAE 206 >gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3P [Methanosarcina acetivorans C2A] gi|27734505|sp|Q8TRU1|RS3_METAC RecName: Full=30S ribosomal protein S3P gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A] Length = 318 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 4/174 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EY L +AG + + RT +I++YS +PG++IGK G I K+ + ++N + Sbjct: 19 EYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVANKYSLENP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + EV +PE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G Sbjct: 79 QIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138 Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 A SR E +++G + + +D G AVA G+ G KV + V Sbjct: 139 A-RSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRIIQPGVVLPD 191 >gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str. Marburg] gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str. Marburg] Length = 275 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 6/195 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G + I +KL + N Sbjct: 15 RIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKSKFNL 74 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EV PE+N ++A IA L+R + FRR ++ M GA GV+V SG+ Sbjct: 75 ENPQVEVKEVDVPELNPRIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA S T + +G + + H+ G A + G G+ V + + V Sbjct: 135 IRGA-RSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYVRIMPPEVVLPDKVE 193 Query: 215 I--PAAEHRVVEKDS 227 I P E+ + Sbjct: 194 IEAPKVTETPSEEPA 208 >gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3P [Methanothermobacter thermautotrophicus str. Delta H] gi|6094177|sp|O26116|RS3_METTH RecName: Full=30S ribosomal protein S3P gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 258 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 6/195 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G + I +KL N + Sbjct: 15 RIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKNKFDL 74 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EV PE+N ++A IA L+R + FRR ++ M GA GV+V SG+ Sbjct: 75 ENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA S T + +G + + H+ G A + G G+ V + D V Sbjct: 135 IRGA-RSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIMPPDVVLPDKVE 193 Query: 215 I--PAAEHRVVEKDS 227 I P E+ S Sbjct: 194 IEDPRVTETPAEEAS 208 >gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3P [Pyrococcus horikoshii OT3] gi|6647791|sp|O59424|RS3_PYRHO RecName: Full=30S ribosomal protein S3P gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus horikoshii OT3] Length = 210 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + D + Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + E++ Sbjct: 193 IEIV---EKPAEEE 203 >gi|283050717|gb|ADB07803.1| ribosomal protein S3 [Luziola fluitans] Length = 177 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 32/177 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + +I I++ II++ P L+ K ++EK Sbjct: 61 SDSSSEVITQNRKMDSGSSSEVITRIEIQKEIDIIHIIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177 >gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote KM3-85-F5] Length = 231 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 8/191 (4%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKL 91 E +REYL ++AG + RT + ++ + + + G +IG++G ++++ ++ Sbjct: 15 ERQLVREYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQED 74 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 +TN ++ V E+ INA ++A +A LER FRRA VQ+ M GA G V Sbjct: 75 FKLTNPQLE--VEEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIV 132 Query: 152 IASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 I SG++ GA R E + +G + +T +D G + A G+ G V + Sbjct: 133 ILSGKITGA-RHRVEKFQKGHIKYCGETALQFMDVGFSTAVKKLGTVGCTVRIMRPGTKL 191 Query: 210 DSDSTIPAAEH 220 + I Sbjct: 192 PHEIAIQERHE 202 >gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160] gi|91207821|sp|Q3IMY2|RS3_NATPD RecName: Full=30S ribosomal protein S3P gi|76558928|emb|CAI50524.1| ribosomal protein S3 [Natronomonas pharaonis DSM 2160] Length = 305 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 5/193 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI L Sbjct: 16 QIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G ++I SG+ Sbjct: 76 EDPQVDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIILSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRD-EVSDSDS 213 + GA SR E + G + A +D G A G+ G++V + + E+ D Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGVQVKIIPPEAELPDDFE 194 Query: 214 TIPAAEHRVVEKD 226 E ++ Sbjct: 195 VYEDIEVEDFVEE 207 >gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3P [Candidatus Methanoregula boonei 6A8] gi|171769709|sp|A7I5P5|RS3_METB6 RecName: Full=30S ribosomal protein S3P gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8] Length = 231 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 10/190 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMTN 96 ++ +YL LK+AG + I RT ++ +++ +PG++IGK G + ++ + N Sbjct: 16 RVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVHQLTQDLAQNYGV 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V +V P NA ++A+ +A LER FR+A ++ M GA G +V+ +G+ Sbjct: 76 ESPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVMDSGALGCEVVIAGK 135 Query: 157 LNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 L GA +RT+ + EG + P T+ ++ G A+A G G++V + D Sbjct: 136 LTGA-RARTQKFTEGYIKHCGEPSNTI---VEKGYAIAIKKLGVIGVQVKIVPADAKMPD 191 Query: 212 DSTIPAAEHR 221 I E + Sbjct: 192 HFAIIEQEKK 201 >gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571] gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571] Length = 241 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 ++ +YL+ LK+AG I RT +I +Y+ +PG++IGK G + +I L N Sbjct: 16 RVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVREITSNLQNDYGI 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V +V P NA ++A+ +A LER FR+A ++ M GA G +V+ SG+ Sbjct: 76 ESPQIEVQQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIMESGALGCEVVISGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L GA SR + + EG + + +++G A+A G G +V + Sbjct: 136 LTGA-RSRVQKFTEGYIKHAGEPSETIVEHGFAIAIKKLGVIGCQVKIVPPGAQLPDHFE 194 Query: 215 IPAAE 219 + E Sbjct: 195 VLEPE 199 >gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z] gi|152060873|sp|A2SPK9|RS3_METLZ RecName: Full=30S ribosomal protein S3P gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z] Length = 231 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 9/196 (4%) Query: 25 RGSEYGALLHEDLKIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82 + K+R +YL LK+AG + I RT ++ +++ +PG++IGK G Sbjct: 4 EKKFVADGVR---KVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGK 60 Query: 83 DIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 + ++ LS + + V +V P +NA ++A+ +A LER FR+A ++ Sbjct: 61 LVRQLTTDLSTVYGIESPQVEVQQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRV 120 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +VI +G+L GA +R + ++EG + + ++ G A A G G++ Sbjct: 121 MDSGALGCEVIIAGKLTGA-RARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQ 179 Query: 200 VYVSLRDEVSDSDSTI 215 V + I Sbjct: 180 VKIVPPGAKLPDQFEI 195 >gi|302748619|gb|ADL63790.1| ribosomal protein S3 [Cannabis sativa] Length = 494 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ---SAMRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSQIVKGIPLVMKKGVEGIRICCS 443 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 444 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 493 >gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3] gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3] Length = 302 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L++AG + + +T +I++ + +PG++IGK G +I K+ ++L + Sbjct: 16 QIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKVTRQLEERFDL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 EDPQIDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G V A +D G A G+ G+ V + D Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMKLGTIGVNVKIIPPGAQLPDDFE 194 Query: 215 I 215 I Sbjct: 195 I 195 >gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5] gi|189045017|sp|A4FWB6|RS3_METM5 RecName: Full=30S ribosomal protein S3P gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5] Length = 211 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + L+ Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLAKEYAVK 75 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V +V P+++ ++ IA LER + FRR A++ M GA GV +I SG+L Sbjct: 76 NPQIEVKQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGSGAKGVSIIVSGKL 135 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +G E SRTE +++G + + A ++ +A+ G G+ V + D + TI Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVTLPDEITI 194 Query: 216 PAAEHRVVEKDS 227 + E + V + S Sbjct: 195 LSGEIKEVTEYS 206 >gi|225024796|ref|ZP_03713988.1| hypothetical protein EIKCOROL_01683 [Eikenella corrodens ATCC 23834] gi|224942503|gb|EEG23712.1| hypothetical protein EIKCOROL_01683 [Eikenella corrodens ATCC 23834] Length = 104 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 75/104 (72%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FRL VN W+S+WFA+ +E+ A+L +D+ +R+YL+ L A V +++IER Sbjct: 1 MGQKIHPTGFRLAVNKDWSSKWFAKSTEFAAVLKQDIDVRDYLRKRLANASVGRVVIERP 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104 K+ RI +++ARPG++IGKKG DIE +++ L + +H+++ Sbjct: 61 AKSARITIHTARPGVVIGKKGEDIEVLKQDLQQLLGVPVHVNIE 104 >gi|150406487|ref|YP_001315118.1| ribosomal protein S3 [Chlorokybus atmophyticus] gi|126507724|gb|ABO15121.1| ribosomal protein S3 [Chlorokybus atmophyticus] Length = 736 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 4/167 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 IR+ + + + T N ++ RP K I+ +SN T Sbjct: 572 IRDKKNKENLNSNPFQTKVRSTDSNFHLL---NRPLQRSQKILNFTNHIKSIISNGTLCH 628 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRL 157 + ++ +P +A L+AQ IA +LE+R FR+ ++ ++ R +G+++ +GR Sbjct: 629 TSIRPVKIKEPFKSAELVAQDIAFKLEKRESFRKISRQIIKDIKRCKYVEGIRITCAGRF 688 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 NGAE++R E G+ L IDY + A T YG G+KV++S Sbjct: 689 NGAEMARVESRRFGQTSLHVFSKKIDYSSKTAYTPYGLFGVKVWISY 735 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQK NPI R +N +S W+ Y LL DL +R Y Q L + + +++ Sbjct: 1 MGQKTNPISVRNQLNRAPDSCWY-NDYNYANLLFHDLNLRSYYQSLLRLIKLNSGRCILQ 59 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDI 84 + K ++ + + KKGT I Sbjct: 60 ISPKKVSLVFFYSNNLTYQSKKGTPI 85 >gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3P [Methanospirillum hungatei JF-1] gi|121731027|sp|Q2FT39|RS3_METHJ RecName: Full=30S ribosomal protein S3P gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1] Length = 237 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 13/194 (6%) Query: 38 KIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 K+R +L LK+AG + + RT ++ +++ +PG++IGK G + + + L+ Sbjct: 14 KVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVRTLTQDLATTY 73 Query: 96 NSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 E + V +V P +NA ++A+ +A LER FR+A ++ M GA G +V+ S Sbjct: 74 GVESPQIEVQQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVIS 133 Query: 155 GRLNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVY-VSLRDEV 208 G+L GA R + + EG + P+ TL +D G AVA G G++V + ++ Sbjct: 134 GKLTGA-RGRVQKFTEGYIKHSGDPVNTL---VDKGYAVAIKKLGVIGVQVRLIPPGAQL 189 Query: 209 SDSDSTIPAAEHRV 222 D A + Sbjct: 190 PDHFEVTAAVTKKQ 203 >gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790] gi|121689634|sp|Q18GF5|RS3_HALWD RecName: Full=30S ribosomal protein S3P gi|109626482|emb|CAJ52943.1| ribosomal protein S3 [Haloquadratum walsbyi DSM 16790] Length = 323 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 5/206 (2%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G + Sbjct: 2 ADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61 Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 I K+ ++L + N + + V EV +P++NA ++A +A LER FR+A + + Sbjct: 62 IRKVTRELEDRFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRII 121 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200 GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V Sbjct: 122 ESGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180 Query: 201 YVSLRD-EVSDSDSTIPAAEHRVVEK 225 + E+ D + VE+ Sbjct: 181 KIIPPGAELPDDFEIHDDVDVEPVEQ 206 >gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote HF70_59C08] Length = 269 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 4/189 (2%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 E L +RE+L ++AG + +RT + ++ + + R G++IG+KG I +++++L N Sbjct: 16 ERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRKGKIINELQRRLQND 75 Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 N L V E+ P +NA ++A +A LER FRRA ++ + M GA G V+ Sbjct: 76 FNLENPRLEVAEIDNPALNAQVMASKLASALERGWYFRRAGHSSLLNIMDAGAKGCLVVL 135 Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SG+L G+ +RT+ + G + T +D G AV G+ G V + Sbjct: 136 SGKLTGS-RNRTQKFQAGHIKYCGDTAIQFMDVGKAVCVKKLGTIGCTVAIMRPGSKLPH 194 Query: 212 DSTIPAAEH 220 + I Sbjct: 195 EIRIKERHE 203 >gi|284162454|ref|YP_003401077.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631] gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 LK++E+L+ +K AG + I RT ++ ++ RPGL+IG+ G I+ +++KL Sbjct: 15 LKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIKILQEKLKEFGL 74 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 LSV+EV +PE NA L+A +A+ LER FRRA R + M GA G ++ SG+ Sbjct: 75 DNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRRAGYRFLYRIMEAGAKGCQIEISGK 134 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L +E +RTE + G + A+ +D G +A G G+ V + D + Sbjct: 135 LV-SERARTEKFTAGTIVHTGDPAYELVDKGFDIAIKKLGVYGVSVKIIPPDVELPDEFK 193 Query: 215 IPAA 218 I Sbjct: 194 IKEV 197 >gi|304322985|ref|YP_003795523.1| ribosomal protein S3 [Floydiella terrestris] gi|270048184|gb|ACZ58479.1| ribosomal protein S3 [Floydiella terrestris] Length = 611 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 6/167 (3%) Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-----SE 98 + I + + + + KK D E + Sbjct: 439 NKKYQSLISRAIQKRMKKNLILMSLRNRFDKVANFKKVYDTENFTTLCEKIAKIQTFPKI 498 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRL 157 + V P + A +A I ++L++R FR +MK+A + AM+ G G+K+ +GRL Sbjct: 499 TSIEFVSVKTPTLYAVCLANFIVEKLQKRFSFRGSMKKAKEDAMKTPGIKGIKIQIAGRL 558 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 NGAE++RTE GRVPLQTL+A IDY A T YG G+KV++ Sbjct: 559 NGAEIARTEWMRAGRVPLQTLKAKIDYSYKTASTIYGILGVKVWLFK 605 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 11/147 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI+P FR+G+ +RWFA +Y + ED IR+ L L + K +E + Sbjct: 1 MGQKIHPFGFRVGITQKHYARWFASPDKYPQYVLEDFLIRKSLYKLLPPENLPKK-MEDS 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 K + + R + + N S + K + +++ Sbjct: 60 GKMRVVHIKIERF----------LRNTIQIKIYAVNPGAFASTKKKTKKVLKNRFTSENR 109 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGAD 147 Q + R ++ K+ A Sbjct: 110 NAQSKNRPGQKKNFKQNKPRAFGKNKQ 136 >gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3P [Methanococcus aeolicus Nankai-3] gi|171460867|sp|A6UWU3|RS3_META3 RecName: Full=30S ribosomal protein S3P gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3] Length = 208 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 4/184 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEI 99 EYL+ L +AG + + +++T RI V++ +PG +IG+KG ++++ + + ++ Sbjct: 18 EYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETIATKYGVNKP 77 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + V ++ P+++A ++AQ IA LER + FRR A++ M GA GV VI SG+L G Sbjct: 78 QIEVKQIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVMAQGAKGVVVIVSGKLTG 137 Query: 160 AELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 E SRTE Y+EG + + +D +A+ G G+ V + + + I Sbjct: 138 -ERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTVKIMPPEITLPDEIVIKD 196 Query: 218 AEHR 221 + Sbjct: 197 VPSK 200 >gi|56181326|gb|AAV83757.1| ribosomal protein S3 [Halimeda melanesica] Length = 219 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 17/161 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + + + KP++ L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNQDAQTKPKLKVILYV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 161 >gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2] gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2] Length = 304 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 9/212 (4%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G + Sbjct: 2 ADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61 Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 I K+ ++L N + + V EV +P++NA ++A +A LER FR+A + M Sbjct: 62 IRKVTRELEERFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200 GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V Sbjct: 122 DAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180 Query: 201 YVSLRDEVSDSD-----STIPAAEHRVVEKDS 227 + D P A ++ E +S Sbjct: 181 KIIPPGARLPDDFEVEEDANPDAVEQIEETES 212 >gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091] gi|121729293|sp|Q2NFW2|RS3_METST RecName: Full=30S ribosomal protein S3P gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091] Length = 252 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 11/204 (5%) Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD--- 83 + E LK I EYL+ L++AG + I+ T +IVY+ +PG++IG+ G Sbjct: 4 KDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVRA 63 Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 I K K ++ N ++ V EV PE+N ++A + L+R + FRR ++ M Sbjct: 64 ITKTLKNNFDLENPQVE--VKEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIMS 121 Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVY 201 GA GV+V SG++ G+ + + EG + + ++ G A + G GI V Sbjct: 122 AGAQGVEVTISGKIRGSRSAC-AKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVR 180 Query: 202 VSLRDEVSDSDSTIPAAEHRVVEK 225 + + + I E VE+ Sbjct: 181 IMPPEVTLPDNIEISEPEIVDVEE 204 >gi|56181230|gb|AAV83709.1| ribosomal protein S3 [Halimeda borneensis] gi|56181232|gb|AAV83710.1| ribosomal protein S3 [Halimeda borneensis] gi|56181234|gb|AAV83711.1| ribosomal protein S3 [Halimeda borneensis] gi|56181242|gb|AAV83715.1| ribosomal protein S3 [Halimeda borneensis] gi|56181244|gb|AAV83716.1| ribosomal protein S3 [Halimeda borneensis] gi|56181252|gb|AAV83720.1| ribosomal protein S3 [Halimeda borneensis] gi|56181254|gb|AAV83721.1| ribosomal protein S3 [Halimeda borneensis] gi|56181256|gb|AAV83722.1| ribosomal protein S3 [Halimeda borneensis] Length = 230 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG +++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|56181236|gb|AAV83712.1| ribosomal protein S3 [Halimeda borneensis] gi|56181238|gb|AAV83713.1| ribosomal protein S3 [Halimeda borneensis] gi|56181240|gb|AAV83714.1| ribosomal protein S3 [Halimeda borneensis] Length = 230 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG +++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|284165498|ref|YP_003403777.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511] gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511] Length = 317 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 4/195 (2%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A ++ + +I E+ Q L +AG + + +T +I++ + +PG++IGK G + Sbjct: 2 ADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGEN 61 Query: 84 IEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 I K + + V EV +P++NA ++A +A LER FR+A + M Sbjct: 62 IRKVTTALEEKFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200 GA G +++ SG++ GA SR E + G + A +D+G VA G+ G+ V Sbjct: 122 EAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180 Query: 201 YVSLRDEVSDSDSTI 215 + D I Sbjct: 181 KIIPPGAELPDDFEI 195 >gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441] Length = 218 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 4/185 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMTNS 97 +RE+L ++AG + RT + ++ + + + G +IG++G I ++++ + Sbjct: 19 VREFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDLD 78 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 L V E+ + NA ++A +A LER FRRA VQ+ M GA G V SG++ Sbjct: 79 NPQLEVEEIEESRTNAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVTLSGKI 138 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 GA R E + +G + +T +D G + A G+ G V + + TI Sbjct: 139 TGA-RHRVEKFQKGHIKYCGETALQLMDVGFSTAVKKLGTIGCTVRIMRPGAKLPHEITI 197 Query: 216 PAAEH 220 Sbjct: 198 QERSE 202 >gi|56181330|gb|AAV83759.1| ribosomal protein S3 [Halimeda melanesica] Length = 221 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG +++ +K++ + S+N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSLNKSRDAQTKPKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6] gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6] Length = 246 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 14/206 (6%) Query: 32 LLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 ED LK++E++ ++ AG + I RT ++ ++ RPGL+IGK G I + Sbjct: 6 KFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIRAL 65 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 ++L +SV+E+ KPE NA L+A +A+ LER FR+A R + M GA Sbjct: 66 TERLKEFGIENPQVSVDEIEKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIMEAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQT---LRAHIDYGTAVAETAYGSCGIKVYVSL 204 G ++ SG+L +E +RTE +L G + + T + + G +A G G+ V + Sbjct: 126 GCEIEISGKLT-SERARTEKFLAGTM-VHTGEPASSMVRKGFDIAIKKLGVLGVTVRIIP 183 Query: 205 RDEVSDS-----DSTIPAAEHRVVEK 225 D + T P ++ Sbjct: 184 PDVELPDEFRVKEITAPDVTEAQAQE 209 >gi|313125796|ref|YP_004036066.1| SSU ribosomal protein s3p [Halogeometricum borinquense DSM 11551] gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551] Length = 310 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G + Sbjct: 2 ADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61 Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 I K+ K L N + + V EV +P++NA ++A +A LER FR+A + M Sbjct: 62 IRKVTKALETRFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200 GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V Sbjct: 122 DAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180 Query: 201 YVSLRDEVSDSD-STIPAAEHRVVEK 225 + D A+ VE+ Sbjct: 181 KIIPPGAKLPDDFEIEEDADVEPVEQ 206 >gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253] gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253] Length = 320 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 4/183 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI ++L N Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITRELGERFNL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 DDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDSGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G + A +D+G VA G+ G+ V + D Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAQTIVDHGQGVAVMKLGTIGVDVKIIPPGADLPDDFQ 194 Query: 215 IPA 217 I Sbjct: 195 IEE 197 >gi|223927404|gb|ACN23325.1| ribosomal protein S3 [Halimeda goreauii] Length = 150 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 7/146 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ + S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQSHLSQWYASKKNYSKYVLEDHFLRTILPKKYTKAGFEKIQISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN---EVPKPEINATLI 116 + I++++ +P + IGKKG ++E +K++ + ++ V + +A+ I Sbjct: 61 IEGHLEIVIHAQKPDIFIGKKGENLEVFQKEIKKLLSTTDSQKPKVILYVIRRTTSASSI 120 Query: 117 AQSIAQQLERRVVFRRAM---KRAVQ 139 A + + LE+RV ++ K+ +Q Sbjct: 121 ADFLIENLEKRVPYKLVFVLLKKHLQ 146 >gi|56181332|gb|AAV83760.1| ribosomal protein S3 [Halimeda melanesica] Length = 219 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG +++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDAQTKPKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7] Length = 359 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EY L++AG A + I RT +I +++ +PG++IGK G + + L+N + Sbjct: 19 EYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVRNLTSDLNNFYDLDNP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + V V PE+NA L+A IA LER FR+A ++ M GA G +++ SG+L G Sbjct: 79 QIDVQGVGVPELNAQLMASRIASALERGWYFRKAAHSTLRRIMGAGALGCRIVLSGKLTG 138 Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SR E +EG + A + G A A G+ G K+ + L D Sbjct: 139 P-RSRIEKIVEGYIVHAGKPAEEIVHTGFATAVRKLGTIGCKIQIVLPDTTLPD 191 >gi|56181306|gb|AAV83747.1| ribosomal protein S3 [Halimeda incrassata] Length = 263 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|56181280|gb|AAV83734.1| ribosomal protein S3 [Halimeda incrassata] Length = 226 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 IA + + LE+R+ ++ K+ + + A+R A + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRA 180 + S E G V + + Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203 >gi|56181302|gb|AAV83745.1| ribosomal protein S3 [Halimeda incrassata] Length = 263 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|223927434|gb|ACN23345.1| ribosomal protein S3 [Halimeda lacrimosa] Length = 139 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 4/135 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117 Query: 120 IAQQLERRVVFRRAM 134 I Q LE+RV ++ Sbjct: 118 IVQNLEKRVPYKLIF 132 >gi|289579904|ref|YP_003478370.1| ribosomal protein S3 [Natrialba magadii ATCC 43099] gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099] Length = 335 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A ++ + +I E+ Q L +AG + + +T +I++ + +PG++IGK G + Sbjct: 2 ADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGEN 61 Query: 84 IEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 I K + + V EV +P++NA ++A +A LER FR+A + M Sbjct: 62 IRKVTTALEEKFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200 GA G +++ SG++ GA SR E + G + A +D G A G+ G+ V Sbjct: 122 EAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGVTV 180 Query: 201 YVSLRDEVSDSDSTI 215 + + D I Sbjct: 181 KIIPPNAELPDDFQI 195 >gi|56181312|gb|AAV83750.1| ribosomal protein S3 [Halimeda incrassata] Length = 260 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|56181308|gb|AAV83748.1| ribosomal protein S3 [Halimeda incrassata] Length = 263 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|56181286|gb|AAV83737.1| ribosomal protein S3 [Halimeda incrassata] Length = 225 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 IA + + LE+R+ ++ K+ + + A+R A + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRA 180 + S E G V + + Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203 >gi|56181324|gb|AAV83756.1| ribosomal protein S3 [Halimeda macroloba] Length = 229 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-------------TNSEIHLSVNEV 106 + I++ + +P ++IGKKG +++ +K++ + N + V Sbjct: 61 IENHIEIVIRAQKPKILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQNKPKLRVILHV 120 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 + + A+ IA + + LE+R+ ++ K+ + + A+R A + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIESSPGL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRA 180 A+ S E G V + + Sbjct: 181 GAADGSVFEQDRTGSVNGASFNS 203 >gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui] Length = 304 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + N Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFNL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 DDPQVDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G V A +D G VA G+ G++V + + D Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKIIPPNAELPDDFE 194 Query: 215 I 215 I Sbjct: 195 I 195 >gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049] gi|57015336|sp|P20281|RS3_HALMA RecName: Full=30S ribosomal protein S3P; AltName: Full=HS1; AltName: Full=HmaS3 gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049] Length = 304 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + N Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFNL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 DDPQVDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G V A +D G VA G+ G++V + + D Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKIIPPNAELPDDFE 194 Query: 215 I 215 I Sbjct: 195 I 195 >gi|56181310|gb|AAV83749.1| ribosomal protein S3 [Halimeda incrassata] Length = 262 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|223927720|gb|ACN23468.1| ribosomal protein S3 [Halimeda cuneata] gi|223927723|gb|ACN23470.1| ribosomal protein S3 [Halimeda cuneata] gi|223927726|gb|ACN23472.1| ribosomal protein S3 [Halimeda cuneata] Length = 164 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113 + I++Y+ +P ++IGKKG + + K S +I + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVTHFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPSAS 120 Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + IA I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164 >gi|56181304|gb|AAV83746.1| ribosomal protein S3 [Halimeda incrassata] Length = 252 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 21/193 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162 +++ A + + LE+R+ ++ K+ Q + G +A+ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179 Query: 163 SRT--ECYLEGRV 173 +R E E V Sbjct: 180 TRMGPETISERSV 192 >gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3P [Thermosphaera aggregans DSM 11486] gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486] Length = 229 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 4/194 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 L I E+L + K AG A + + RT R+++Y+ PG +IG+ G+ I+K+ L Sbjct: 18 LMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIKKLTTILQTRFG 77 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++++V+ V P++NA ++A I + LE+ + FRR M ++ M GA G ++I SG Sbjct: 78 LENVNITVSPVMDPDLNARVVAFRIVRALEKEIPFRRVMMGMLKRIMDAGAVGAEIIISG 137 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L G E + E G++ + + ID A A G G++V + Sbjct: 138 KLRG-ERATYEKMRVGKIYKAGEPVEYIIDRAVARALLKPGIYGVEVLIVKPGIKLPDHV 196 Query: 214 TIPAAEHRVVEKDS 227 I + +++++ Sbjct: 197 EIKPVKPEALKQEA 210 >gi|223927425|gb|ACN23339.1| ribosomal protein S3 [Halimeda gracilis] Length = 138 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 4/135 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A EY + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKEYSKYVLEDHFLRTRLQKKYSRAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117 Query: 120 IAQQLERRVVFRRAM 134 I Q +E+RV ++ Sbjct: 118 IVQNIEKRVPYKLVF 132 >gi|56181284|gb|AAV83736.1| ribosomal protein S3 [Halimeda incrassata] Length = 227 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLXFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 IA + + LE+R+ ++ K+ + + A+R A + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIXFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180 Query: 158 NGAELSRTECYLEGRVPLQTLRA 180 + S E G V + + Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203 >gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3P [Thermococcus kodakarensis KOD1] gi|73918002|sp|Q5JDH5|RS3_PYRKO RecName: Full=30S ribosomal protein S3P gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1] Length = 209 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 10/179 (5%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I E+L+ L++AG + I++T ++ +++A PG +IG+ G I ++ + L Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 G E +++ + +G + P +TL + G A A+ G G+KV + D Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETL---VSRGYAQAQLKLGVIGVKVSIMPPDAKLPD 191 >gi|302748555|gb|ADL63758.1| ribosomal protein S3 [Arbutus canariensis] Length = 481 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 302 NLLGKD-KVMELIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 359 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN++ + ++ +A+LIAQ I+ QL + FR + V+ M+ G Sbjct: 360 LSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGV 419 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 420 EGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKVWISY 477 >gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1] gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1] Length = 251 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 9/202 (4%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L +D YL+ +K+AG + I +T R+ ++ RPG++IG+KG+ I Sbjct: 9 KDNYNMMLLKD-----YLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGSGIR 63 Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 K ++ +SV E+ KPE++ +++ +A LER FRRA ++ M Sbjct: 64 DLTDKLATDFGLKNPQISVVEIEKPELSPSVMCNRMASHLERGTAFRRATMWTLKQIMEN 123 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE--TAYGSCGIKVYV 202 GA GV++ SG+L G + S E + G +P A + +A TA G GI++ + Sbjct: 124 GAMGVQITISGKLRG-DRSAFEKHTAGILPRAGHHAEVIVAEDIAHVGTAMGLIGIRIRI 182 Query: 203 SLRDEVSDSDSTIPAAEHRVVE 224 + +++ + + Sbjct: 183 ARKEKFVPEFEMKAEKPKKAKQ 204 >gi|56181292|gb|AAV83740.1| ribosomal protein S3 [Halimeda incrassata] gi|56181296|gb|AAV83742.1| ribosomal protein S3 [Halimeda incrassata] gi|56181314|gb|AAV83751.1| ribosomal protein S3 [Halimeda incrassata] Length = 251 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162 +++ A + + LE+R+ ++ K+ Q + G +A+ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179 Query: 163 SRT--ECYLEGRV 173 + E E V Sbjct: 180 THMGPETISERSV 192 >gi|291147676|gb|ACB20494.2| ribosomal protein S3 [Carica papaya] Length = 550 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+ Sbjct: 380 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 438 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++ Sbjct: 439 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 498 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+V IDY A T YG G+KV++S Sbjct: 499 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 549 Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P K + K+ Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRRKKTRPGKEKGRWW 98 >gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940] gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940] Length = 326 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ + L +AG + + +T +I++ + +PG++IGK G +I KI L Sbjct: 16 QIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 EDPQVDVQEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGAKGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G + A +D+G VA G+ G+ V + + D Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVDVKIIPPNAELPDDFE 194 Query: 215 I 215 I Sbjct: 195 I 195 >gi|224020972|ref|YP_002608205.1| ribosomal protein S3 [Carica papaya] Length = 550 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+ Sbjct: 380 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 438 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++ Sbjct: 439 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 498 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+V IDY A T YG G+KV++S Sbjct: 499 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 549 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSEYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P K + K+ Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRRKKTRPGKEKGRWW 98 >gi|56181328|gb|AAV83758.1| ribosomal protein S3 [Halimeda melanesica] Length = 209 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 17/161 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + + + KP++ L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNQDAQTKPKLKVILYV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 161 >gi|56181290|gb|AAV83739.1| ribosomal protein S3 [Halimeda incrassata] gi|56181294|gb|AAV83741.1| ribosomal protein S3 [Halimeda incrassata] gi|56181316|gb|AAV83752.1| ribosomal protein S3 [Halimeda incrassata] gi|56181318|gb|AAV83753.1| ribosomal protein S3 [Halimeda incrassata] Length = 251 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162 +++ A + + LE+R+ ++ K+ Q + G +A+ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179 Query: 163 SRT--ECYLEGRV 173 + E E V Sbjct: 180 THMGPETISERSV 192 >gi|223927288|gb|ACN23257.1| ribosomal protein S3 [Halimeda heteromorpha] Length = 234 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|223927771|gb|ACN23502.1| ribosomal protein S3 [Halimeda cuneata] Length = 166 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSTLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+RV ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIQISG 166 >gi|56181258|gb|AAV83723.1| ribosomal protein S3 [Halimeda incrassata] gi|56181260|gb|AAV83724.1| ribosomal protein S3 [Halimeda incrassata] gi|56181266|gb|AAV83727.1| ribosomal protein S3 [Halimeda incrassata] gi|56181270|gb|AAV83729.1| ribosomal protein S3 [Halimeda incrassata] gi|56181272|gb|AAV83730.1| ribosomal protein S3 [Halimeda incrassata] Length = 233 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|108773037|ref|YP_635947.1| ribosomal protein S3 [Scenedesmus obliquus] gi|122231594|sp|Q1KVX7|RR3_SCEOB RecName: Full=30S ribosomal protein S3, chloroplastic gi|88696603|gb|ABD48229.1| ribosomal protein S3 [Scenedesmus obliquus] Length = 700 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 8/166 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E L+ + + + K ++ + + K+ T EK + + I Sbjct: 523 EILKNKVSKTFFKISQKNASQKKNFQDIFVEQ----LQKQRTICEKNIQLTPKI---SIQ 575 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNG 159 + + A+ +A SI LE+R FR +K+A + GVK+ SGRLNG Sbjct: 576 FYSVKAQDFQTRASAVADSIVDDLEKRKAFRGVIKKAKEDLMRTPKVKGVKIQVSGRLNG 635 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 AE++R+E GRVPLQTLRA+IDY A+T YG G+KV++ Sbjct: 636 AEIARSEWVRAGRVPLQTLRANIDYCYKTAQTIYGIIGVKVWIYKG 681 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 4/114 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQKI+P+ FR+G+ S WFA +Y + ED +R+ L L Q K+ Sbjct: 1 MGQKIHPLGFRVGITKKHQSVWFARFHKHQYAQSVLEDRFLRKNLLKLLPQLFQKKLNN- 59 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 + +I GLI + G I + + + N V N Sbjct: 60 -SPNMPKISHIQIVRGLIPYEIGIQIHAQNCHMIKSAFEGLEVQPNFVHNLLKN 112 >gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT] gi|121694870|sp|A0B9W4|RS3_METTP RecName: Full=30S ribosomal protein S3P gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT] Length = 276 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 4/180 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EYL L +AG +++ RT +I VY+ +PG++IGK G I K+ + L Sbjct: 19 EYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIRKLTRDLERRFRLDNP 78 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + V +V K ++NA ++A +A LE FR+A + ++ M GA G +++ SG+L G Sbjct: 79 QIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVMDSGALGCEIVISGKLTG 138 Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 SR E +L G + A +D G AVA G+ G +V + V D I A Sbjct: 139 P-RSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQVRIVPPGAVLPDDFQINA 197 >gi|56181298|gb|AAV83743.1| ribosomal protein S3 [Halimeda incrassata] Length = 258 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|239995007|ref|ZP_04715531.1| 30S ribosomal protein S3 [Alteromonas macleodii ATCC 27126] Length = 93 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 3/89 (3%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 MR GA G+KV SGRL GAE++R+E Y EGRVPL T RA IDY T+ A T YG G+KV+ Sbjct: 1 MRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRADIDYATSEASTTYGIIGVKVW 60 Query: 202 VSLRDEVSD---SDSTIPAAEHRVVEKDS 227 + + + + PAA+ + +++ Sbjct: 61 IFKGEVLGGLPTTQEQAPAAQPKKKGRNA 89 >gi|56181288|gb|AAV83738.1| ribosomal protein S3 [Halimeda incrassata] gi|56181322|gb|AAV83755.1| ribosomal protein S3 [Halimeda incrassata] Length = 258 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|56181278|gb|AAV83733.1| ribosomal protein S3 [Halimeda incrassata] Length = 233 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3] gi|259495259|sp|C5A280|RS3_THEGJ RecName: Full=30S ribosomal protein S3P gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3] Length = 209 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 10/179 (5%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 G E +++ + +G + P +TL + G A A G G+KV + D Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPD 191 >gi|11466512|ref|NP_044761.1| ribosomal protein S3 [Reclinomonas americana] gi|2258342|gb|AAD11876.1| ribosomal protein S3 [Reclinomonas americana] Length = 287 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 72/275 (26%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIE 58 MGQK+NPI R+GVN W+SRW + +YG L +DL IR +++ C ++ + K+ I Sbjct: 1 MGQKVNPISLRIGVNQMWDSRW-SHDKKYGKYLEQDLLIRSFIEDLCGYQEIFIGKLSIW 59 Query: 59 RTHKNCRIIV-----YSARPGLIIGKKGTDIEKIR-------KKLSNMTNSEIHLSVNEV 106 R+ + V + +P L I + K ++ + + I+ + + Sbjct: 60 RSCSMNSLTVNLTDTNTVKPNLFIYFQMYVPYKTYSTNKEQKQEWLSNLENTIYNYLEDR 119 Query: 107 PKPEINATL-----------------------------------------IAQSIAQQLE 125 + N +L I+Q IA + + Sbjct: 120 FRNTFNISLLIDPIFEENSGDSKRSKQKTEIDFTFNNDVIKWLLNKDCLMISQWIANEFQ 179 Query: 126 RRVVFR---RAMKRAVQSAM------RFGADGVKVIASGRLNGAE-------LSRTECYL 169 +R + R +++ ++ DG+K+ SGR + ++R + + Sbjct: 180 KRKGLKEVCRIIEKCFDHIKTEAIDLKYRIDGIKITCSGRFKMTDNEKRRNKMARIKTFK 239 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G++PLQTL HI+Y A A T G+ GIKV++S Sbjct: 240 KGQIPLQTLSKHINYHLATAYTPDGTSGIKVWISY 274 >gi|288931516|ref|YP_003435576.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642] gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642] Length = 223 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 32 LLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 ED L ++E++ ++ AG + I RT ++ ++ RPGL+IG+ G I+ + Sbjct: 6 KFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIKAL 65 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147 +KL +SV+E+ KPE NA L+A +A+ LER FR+A R + M GA Sbjct: 66 TEKLKEFGLDNPQISVDEIDKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIMEAGAK 125 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI---DYGTAVAETAYGSCGIKVYVSL 204 G ++ SG+L +E +RTE ++ G + + T I G +A G G++V + Sbjct: 126 GCEIEISGKLT-SERARTEKFIAGTI-IHTGDPAITCVREGFDIAIKKLGVYGVRVRIIP 183 Query: 205 RDEVSDSDSTIPAAEHRVVEK 225 D + + +++ Sbjct: 184 PDAELPDEFVVKDVPVEQLKE 204 >gi|223927294|gb|ACN23260.1| ribosomal protein S3 [Halimeda heteromorpha] Length = 235 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 IA + + LE+R+ ++ K+ + + A+R A + + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGL 180 Query: 158 NGAELSRTECYLEGRV 173 + S E G V Sbjct: 181 GASGGSVFEQDRTGSV 196 >gi|56181246|gb|AAV83717.1| ribosomal protein S3 [Halimeda borneensis] gi|56181248|gb|AAV83718.1| ribosomal protein S3 [Halimeda borneensis] gi|56181250|gb|AAV83719.1| ribosomal protein S3 [Halimeda borneensis] Length = 230 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG +++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1] Length = 251 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L +D YL+ +K AG + I +T R+ ++ RPG++IG+KG+ I Sbjct: 9 KDNYNMMLLKD-----YLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGSGIR 63 Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 + K ++ +SV E+ KPE++ +++ +A LER FRRA ++ M Sbjct: 64 ELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLERGTAFRRATMWTLKQIMEN 123 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYV 202 GA GV++ SG+L G + S E + G +P A +D A ETA G GI++ + Sbjct: 124 GAMGVQITISGKLRG-DRSAFEKHTAGILPRAGHHAEVIVDEDIAHVETAMGLIGIRIRI 182 Query: 203 SLRDEVSDSDSTIPAAEHRVVE 224 + ++ + + Sbjct: 183 ARNEKYVPEFELKTQKPKKAKQ 204 >gi|56180940|gb|AAV83572.1| ribosomal protein S3 [Halimeda discoidea] gi|56180943|gb|AAV83574.1| ribosomal protein S3 [Halimeda discoidea] gi|56180946|gb|AAV83576.1| ribosomal protein S3 [Halimeda discoidea] gi|56180979|gb|AAV83598.1| ribosomal protein S3 [Halimeda discoidea] gi|71057449|emb|CAJ18167.1| ribosomal protein S3 [Halimeda discoidea] gi|223927821|gb|ACN23534.1| ribosomal protein S3 [Halimeda discoidea] gi|223927824|gb|ACN23536.1| ribosomal protein S3 [Halimeda discoidea] gi|223927827|gb|ACN23538.1| ribosomal protein S3 [Halimeda discoidea] gi|223927830|gb|ACN23540.1| ribosomal protein S3 [Halimeda discoidea] gi|223927833|gb|ACN23542.1| ribosomal protein S3 [Halimeda discoidea] gi|223927842|gb|ACN23548.1| ribosomal protein S3 [Halimeda discoidea] gi|223927845|gb|ACN23550.1| ribosomal protein S3 [Halimeda discoidea] gi|223927848|gb|ACN23552.1| ribosomal protein S3 [Halimeda discoidea] gi|223927851|gb|ACN23554.1| ribosomal protein S3 [Halimeda discoidea] gi|223927854|gb|ACN23556.1| ribosomal protein S3 [Halimeda discoidea] gi|223927857|gb|ACN23558.1| ribosomal protein S3 [Halimeda discoidea] gi|223927860|gb|ACN23560.1| ribosomal protein S3 [Halimeda discoidea] gi|223927872|gb|ACN23568.1| ribosomal protein S3 [Halimeda discoidea] gi|223927875|gb|ACN23570.1| ribosomal protein S3 [Halimeda discoidea] gi|223927878|gb|ACN23572.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|254172991|ref|ZP_04879665.1| ribosomal protein S3 [Thermococcus sp. AM4] gi|214033147|gb|EEB73975.1| ribosomal protein S3 [Thermococcus sp. AM4] Length = 209 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 10/179 (5%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 G E +++ + +G + P +TL + G A A G G+KV + + Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPEARLPD 191 >gi|56180961|gb|AAV83586.1| ribosomal protein S3 [Halimeda cuneata] gi|56180964|gb|AAV83588.1| ribosomal protein S3 [Halimeda cuneata] gi|56180967|gb|AAV83590.1| ribosomal protein S3 [Halimeda cuneata] gi|223927732|gb|ACN23476.1| ribosomal protein S3 [Halimeda cuneata] gi|223927735|gb|ACN23478.1| ribosomal protein S3 [Halimeda cuneata] Length = 165 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 88/166 (53%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112 + I++++ +P ++IGKK +++ ++++ +I + + + + +IN Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q R+ G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QRYSPLGMKIQISG 165 >gi|56180949|gb|AAV83578.1| ribosomal protein S3 [Halimeda cuneata] gi|56180952|gb|AAV83580.1| ribosomal protein S3 [Halimeda cuneata] gi|56180955|gb|AAV83582.1| ribosomal protein S3 [Halimeda cuneata] gi|56180958|gb|AAV83584.1| ribosomal protein S3 [Halimeda cuneata] gi|71057443|emb|CAJ18157.1| ribosomal protein S3 [Halimeda cuneata] gi|71057446|emb|CAJ18162.1| ribosomal protein S3 [Halimeda cuneata] gi|223927753|gb|ACN23490.1| ribosomal protein S3 [Halimeda cuneata] gi|223927756|gb|ACN23492.1| ribosomal protein S3 [Halimeda cuneata] gi|223927762|gb|ACN23496.1| ribosomal protein S3 [Halimeda cuneata] gi|223927765|gb|ACN23498.1| ribosomal protein S3 [Halimeda cuneata] gi|223927768|gb|ACN23500.1| ribosomal protein S3 [Halimeda cuneata] Length = 166 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+RV ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIQISG 166 >gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3P [Methanosphaerula palustris E1-9c] gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c] Length = 234 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 6/194 (3%) Query: 38 KIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 K+R +L LK+AG + I RT ++ +Y+ +PG++IGK G + ++ + L+ Sbjct: 14 KVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVRQLTQDLATTY 73 Query: 96 N-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 + V +V P NA ++A+ +A LER FR+A V+ M GA G +V+ S Sbjct: 74 GIESPQIEVQQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVMESGALGCEVVLS 133 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G+L GA +R + + EG + + ++ G A+A G+ G++V + D Sbjct: 134 GKLTGA-RARVQKFTEGYIKHSGEPSITIVEKGYAIAIKKLGTIGVQVKIIPPDAKLPDQ 192 Query: 213 STIPAAEHRVVEKD 226 I + + + Sbjct: 193 FEILDVKKPEIPAE 206 >gi|290454848|emb|CBH29631.1| ribosomal protein S3 [Alder yellows phytoplasma] gi|290454851|emb|CBH29633.1| ribosomal protein S3 [Alder yellows phytoplasma] gi|290454857|emb|CBH29637.1| ribosomal protein S3 [Rubus stunt phytoplasma] gi|290454860|emb|CBH29639.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 147 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|223928018|gb|ACN23664.1| ribosomal protein S3 [Halimeda cf. cuneata JH12] Length = 158 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++Y+ +P ++IG + I + NS++ + + ++ IA Sbjct: 61 VEDHLEIVIYAQKPDILIGVQKHIKTSIFQYRQIDWNSKLKVILYIFQCKPSASSAIADF 120 Query: 120 IAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 IVEHLEKRIPYKVVFNLLKKHLKRTKQS-TLGMKIQISG 158 >gi|295311706|ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259156834|gb|ACV96695.1| ribosomal protein S3 [Cucurbita pepo] Length = 565 Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93 ED I E ++ + G+ ++ I+ II+ + R +++K+R LSN Sbjct: 378 KEDKVI-ELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSN 435 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGV 149 T + + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+ Sbjct: 436 RTKTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDIPFGMKKGVEGI 495 Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 ++ SGRL GAE++RTEC G+ IDY +A T YG G+KV++S + + Sbjct: 496 RICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISYKKQKK 555 Query: 210 DS 211 + Sbjct: 556 ER 557 Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG LL++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K ++ P G K K K Sbjct: 60 CIILHFPKIT--FIHFFLPRRPRGLKRRAKSKPGKDQGRWW 98 >gi|302748633|gb|ADL63797.1| ribosomal protein S3 [Celtis yunnanensis] Length = 488 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 4/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S Sbjct: 382 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSKIVKDIPLVMKKGVEGIRICCS 441 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 GRL GAE++RTEC G+ IDY +A T YG G+KV+ Sbjct: 442 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVW 488 >gi|56181264|gb|AAV83726.1| ribosomal protein S3 [Halimeda incrassata] Length = 230 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP-6] gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP-6] Length = 278 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 + EYL L++AG + + RT +I VY+ +PG++IGK G I KI + L + Sbjct: 17 VNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGKLIRKITRDLDRRFHLD 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V +V + ++N ++A +A LER FR+A + ++ M GA G +++ SG+L Sbjct: 77 NPQIDVQDVGRGDLNGRVVANRLASSLERGWYFRKAGQSMMRRVMDAGALGCEIVISGKL 136 Query: 158 NGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G SRTE ++ G + A +D G +VA G G +V + D D I Sbjct: 137 TGP-RSRTEKFIAGYIKHSGKPAIDLVDRGYSVAVKKLGVIGCQVRIIPPDVRLPDDFQI 195 >gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon] Length = 234 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 7/196 (3%) Query: 37 LKIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 K+R EY Q L++AG + I+RT +I V+ +PG+IIGK G I+K+ +++ Sbjct: 12 KKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVTDEITKK 71 Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 + V + PE++A L++ +A+ +ER FRRA + +Q M GA G ++ Sbjct: 72 QELDNPQIDVQPIAAPELSAQLMSNRLAKLIERGWHFRRAGRSTLQRIMGAGALGCEITM 131 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDE-VSD 210 SG+L G R E +EG + A +D G ++A+ G G+ V++ D + D Sbjct: 132 SGKLRGP-RGRVEKMVEGYIKHCGSVAEEIVDKGYSIAQKKTGVIGVMVWIVAPDANIPD 190 Query: 211 SDSTIPAAEHRVVEKD 226 S E VV ++ Sbjct: 191 SFRMNVVKEDVVVNEE 206 >gi|223927836|gb|ACN23544.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPNILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|223928015|gb|ACN23662.1| ribosomal protein S3 [Halimeda cf. cuneata HV823] Length = 158 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++Y+ +P ++IG + I + NS++ + + ++ IA Sbjct: 61 VEDHLEIVIYAQKPDILIGVQKHIKTSIFQYRQIEWNSKLKVILYIFQCKPSASSAIADF 120 Query: 120 IAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 IVEHLEKRIPYKVVFNLLKKHLKRTKQS-TLGMKIQISG 158 >gi|223927302|gb|ACN23264.1| ribosomal protein S3 [Halimeda simulans] Length = 276 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|56181262|gb|AAV83725.1| ribosomal protein S3 [Halimeda incrassata] Length = 233 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157 IA + + LE+R+ ++ K+ + + A+R A + + +S L Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGL 180 Query: 158 NGAELSRTECYLEGRV 173 + S E G V Sbjct: 181 GASGGSVFEQDRTGSV 196 >gi|290454866|emb|CBH29643.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] gi|296172308|emb|CBL59885.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 147 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|223927839|gb|ACN23546.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|56181356|gb|AAV83772.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|302748623|gb|ADL63792.1| ribosomal protein S3 [Carica papaya] Length = 496 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+ Sbjct: 326 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+V IDY A T YG G+KV++S Sbjct: 445 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 495 >gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1] gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1] gi|21264507|sp|P15009|RS3_HALSA RecName: Full=30S ribosomal protein S3P; AltName: Full=HHAS3; AltName: Full=HS4 gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum] gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1] gi|167727443|emb|CAP14231.1| ribosomal protein S3 [Halobacterium salinarum R1] Length = 302 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 4/183 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + T +I++ + +PG++IGK G +I KI +L + Sbjct: 16 QIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGKNIRKITTQLEERFDL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+ Sbjct: 76 EDPQIDVQEVEEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + G R E + G + A +D+G VA G+ G+ V + + D Sbjct: 136 VTGN-RGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVNVKIIPPNAELPDDFE 194 Query: 215 IPA 217 I Sbjct: 195 IQE 197 >gi|56181346|gb|AAV83767.1| ribosomal protein S3 [Halimeda simulans] gi|56181348|gb|AAV83768.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|56181352|gb|AAV83770.1| ribosomal protein S3 [Halimeda simulans] gi|56181358|gb|AAV83773.1| ribosomal protein S3 [Halimeda simulans] gi|56181360|gb|AAV83774.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|316996014|dbj|BAD83474.2| ribosomal protein S3 [Nicotiana tabacum] Length = 563 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I II+ + R +++K+R L N TN+ Sbjct: 379 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKVWISY 548 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 9/100 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG L+++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 +I K R ++ P K + + K+ Sbjct: 60 CIIIHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 97 >gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2] gi|61215571|sp|Q6LXE7|RS3_METMP RecName: Full=30S ribosomal protein S3P gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2] Length = 211 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 4/190 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97 I EY + L +AG + I ++T RI V++ +PG +IG+KG ++++ + + + Sbjct: 16 IDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVK 75 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L Sbjct: 76 NPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKL 135 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +G E SRTE +++G + + A ++ +A+ G G+ V + D + I Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDVSLPDEIVI 194 Query: 216 PAAEHRVVEK 225 + E + V + Sbjct: 195 SSGEIKEVSE 204 >gi|56181364|gb|AAV83776.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6] gi|226697730|sp|A9A9Q9|RS3_METM6 RecName: Full=30S ribosomal protein S3P gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6] Length = 211 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97 I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + + + Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVN 75 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L Sbjct: 76 NPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKL 135 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +G E SRTE +++G + + A ++ +A+ G G+ V + D + TI Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVSLPDEITI 194 Query: 216 PAAEHRVVEKDS 227 + E + V + S Sbjct: 195 LSGEIKEVTEYS 206 >gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7] gi|189045018|sp|A6VGZ0|RS3_METM7 RecName: Full=30S ribosomal protein S3P gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7] Length = 211 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 4/192 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97 I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + + + Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVN 75 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L Sbjct: 76 NPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVSIIVSGKL 135 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +G E SRTE +++G + + A ++ +A+ G G+ V + D + TI Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVSLPDEITI 194 Query: 216 PAAEHRVVEKDS 227 + E + V + S Sbjct: 195 LSGEIKEVTEYS 206 >gi|320148731|emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. maritima] Length = 551 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGSNSYLNEVKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF YG L+++D+ +R Y L Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYF----GSIRPPTRLTFGF 55 Query: 61 HKNCRIIVYSARPGLI 76 II++ + I Sbjct: 56 RLGRCIIIHFQKRTFI 71 >gi|56181268|gb|AAV83728.1| ribosomal protein S3 [Halimeda incrassata] Length = 226 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|290454863|emb|CBH29641.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 147 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|290454854|emb|CBH29635.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] gi|290454875|emb|CBH29649.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi] Length = 147 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|56181060|gb|AAV83652.1| ribosomal protein S3 [Halimeda gracilis] Length = 152 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 5/156 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++++ +P ++IGKKG ++E +K++ + + + V + + +A+ IA Sbjct: 61 VENHIEIVIHAQKPDILIGKKGENLELFQKEIKHFNTKK--KVILYVRRCKTSASSIADF 118 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 I Q +E+RV ++ + G+K+ SG Sbjct: 119 IVQNIEKRVPYKLIF--ILLKKHFKIDFGMKIQISG 152 >gi|56180931|gb|AAV83566.1| ribosomal protein S3 [Halimeda cuneata] gi|56180934|gb|AAV83568.1| ribosomal protein S3 [Halimeda cuneata] Length = 164 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113 + I++Y+ +P ++IGKKG + + K S +I + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVKNFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPSAS 120 Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + IA I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164 >gi|56181354|gb|AAV83771.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|156619315|gb|ABU88337.1| ribosomal protein S3 [Chlamydomonas moewusii] Length = 800 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%) Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-AD 147 + L + I + A+++++S+ LE+R FR+ +K ++ MR Sbjct: 672 QNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIKTTKENLMRNSEIK 731 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GVK+ +GRLNGAE++RTE GRVPLQTLRA++DY A T YG G+KV++ Sbjct: 732 GVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYGIIGVKVWIFKG 789 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ--------A 50 MGQK++P FR+G+ S+WFA ++Y + ED IR+ L + Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 K K RI ++ + G I KL + + + + + K + Sbjct: 61 SAPKRDQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120 Query: 111 INATLIAQ 118 + Sbjct: 121 KTRQYLTN 128 >gi|41179046|ref|NP_958402.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|32700064|sp|Q08365|RR3_CHLRE RecName: Full=30S ribosomal protein S3, chloroplastic; AltName: Full=ORF 712 gi|28269769|tpg|DAA00947.1| TPA_inf: ribosomal protein S3 [Chlamydomonas reinhardtii] Length = 712 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150 I + A+ +A SI LE+R FR +K+A + + GVK Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKGVK 653 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++ Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA + Y + ED +R L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51 >gi|302748885|gb|ADL63922.1| ribosomal protein S3 [Morus alba] Length = 490 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 7/170 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + + G+ + + I + + +++K+R LSN TN+ Sbjct: 320 KVMGLIDKFIDLGGIGEF---KKGIEMMIEIILRNRRIPYEYSN-EVKKMRSFLSNRTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S Sbjct: 376 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSKIVKDIPLVMKKGVEGIRICCS 435 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 436 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 485 >gi|56181228|gb|AAV83708.1| ribosomal protein S3 [Halimeda borneensis] Length = 227 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG ++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|1173249|sp|P46307|RR3_CHLMO RecName: Full=30S ribosomal protein S3, chloroplastic gi|575476|gb|AAA84159.1| ribosomal protein S3 [Chlamydomonas moewusii] Length = 800 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%) Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-AD 147 + L + I + A+++++S+ LE+R FR+ +K ++ MR Sbjct: 672 QNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIKTTKENLMRNSEIK 731 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GVK+ +GRLNGAE++RTE GRVPLQTLRA++DY A T YG G+KV++ Sbjct: 732 GVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYGIIGVKVWIFKG 789 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ--------A 50 MGQK++P FR+G+ S+WFA ++Y + ED IR+ L + Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 K K RI ++ + G I KL + + + + + K + Sbjct: 61 SAPKRHQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120 Query: 111 INATLIAQ 118 + Sbjct: 121 KTRQYLTN 128 >gi|290454869|emb|CBH29645.1| ribosomal protein S3 [Candidatus Phytoplasma vitis] Length = 147 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|213517427|gb|ACJ50133.1| ribosomal protein S3 [Chlamydomonas reinhardtii] Length = 712 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 4/115 (3%) Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150 I + A+ +A SI LE+R FR +K+A + + GVK Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKGVK 653 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++ Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA + Y + ED +R L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51 >gi|162279931|ref|NP_064078.2| ribosomal protein S3 [Beta vulgaris subsp. vulgaris] gi|87248050|gb|ABD36079.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris] gi|148491435|dbj|BAA99471.2| ribosomal protein S3 [Beta vulgaris subsp. vulgaris] Length = 551 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNIRIAYGSNSYLNEVKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF Y L+++DL +R Y L Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYSKLVYQDLNLRSYF----GSIRPPTRLTFGF 55 Query: 61 HKNCRIIVYSARPGLI 76 II++ + I Sbjct: 56 RLGRCIIIHFQKRTFI 71 >gi|290454872|emb|CBH29647.1| ribosomal protein S3 [Rubus stunt phytoplasma] Length = 147 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 4/145 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60 Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 K+ I +Y ++ G+I G + + + K+ + N ++ +++ EV A L+ Sbjct: 61 KKSNDEFIEIDLYISKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141 AQ+IA QL++R ++ +K A+Q A Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145 >gi|295154456|gb|ADF83137.1| ribosomal protein S3 [Orcuttia viscida] gi|295154512|gb|ADF83165.1| ribosomal protein S3 [Orcuttia inaequalis] Length = 147 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110 + I I+R +I++ P L+ K ++EK +K N N +++++ +V +P Sbjct: 5 ITHIEIQREIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPY 64 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC + Sbjct: 65 RQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKK 124 Query: 171 GRVPLQTLRAHIDYGTAVAETAY 193 GR+PLQT+RA IDY T Y Sbjct: 125 GRLPLQTIRAKIDYCCYPIRTIY 147 >gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3P [Halomicrobium mukohataei DSM 12286] gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286] Length = 317 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I E+ L +AG + + +T +I++ + +PG++IGK G +I KI L Sbjct: 16 QIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + V EV +P++NA ++A + LER FR+A + M GA G +++ SG+ Sbjct: 76 EDPQVDVQEVDEPDLNARIVADRLGNALERGWYFRKAGHTTIDRIMEAGAKGAEIVLSGK 135 Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + GA SR E + G + A +D G VA G+ G++V + + D Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMKLGTIGVRVKIIPPEAELPDDFE 194 Query: 215 I 215 I Sbjct: 195 I 195 >gi|56180937|gb|AAV83570.1| ribosomal protein S3 [Halimeda cuneata] Length = 164 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113 + I++Y+ +P ++IGKKG + + K S +I + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVKNFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPXAS 120 Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + IA I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164 >gi|323435098|ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. maritima] gi|317905652|emb|CBJ14050.1| ribosomal protein S3 [Beta vulgaris subsp. maritima] gi|319439831|emb|CBJ17541.1| ribosomal protein S3 [Beta vulgaris subsp. maritima] Length = 551 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNIRIAYGSNSYLNEVKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF Y L+++D+ +R Y L Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYSKLVYQDINLRSYF----GSIRPPTRLTFGF 55 Query: 61 HKNCRIIVYSARPGLI 76 II++ + I Sbjct: 56 RLGRCIIIHFQKRTFI 71 >gi|56181274|gb|AAV83731.1| ribosomal protein S3 [Halimeda incrassata] gi|56181276|gb|AAV83732.1| ribosomal protein S3 [Halimeda incrassata] Length = 233 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 21/179 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P + IGKKG +++ +K++ + + +N+ + + L Sbjct: 61 IENHIEIVIRAQKPEIFIGKKGENLKNFQKEIKKLIFK--YRGLNQSRNAQSKSKLRVIL 118 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 119 HVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSTVSTSIDSS 177 >gi|223928021|gb|ACN23666.1| ribosomal protein S3 [Halimeda magnidisca] gi|223928024|gb|ACN23668.1| ribosomal protein S3 [Halimeda magnidisca] gi|223928027|gb|ACN23670.1| ribosomal protein S3 [Halimeda magnidisca] gi|223928030|gb|ACN23672.1| ribosomal protein S3 [Halimeda magnidisca] gi|223928033|gb|ACN23674.1| ribosomal protein S3 [Halimeda magnidisca] Length = 166 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFVRTILSEKYNRAQFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDVLIGKKGENLEIFQKQMKKFIFQYRQIEWNSKLKVILYIFRCQTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+RV ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote KM3-136-D10] Length = 400 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNC----RIIVYSARPGLIIGKKGTDIEKIRKK 90 E +REYL ++AG + ER ++ + + R G++IG++G I +++++ Sbjct: 16 ERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVIGRRGKVINELQRR 75 Query: 91 LSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 + N L V E+ P +NA ++A +A LER FRRA +V + + GA G Sbjct: 76 IRTDFNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNVIEAGAKGC 135 Query: 150 KVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +I +G+L G+ RTE +L+G + +T H+D G A A G+ G V + Sbjct: 136 LIIIAGKLTGS-RHRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCTVAIMKPGT 194 Query: 208 VSDSDSTI 215 + I Sbjct: 195 KLPHEVDI 202 >gi|272716513|gb|ACZ95535.1| ribosomal protein S3 [Dacrycarpus imbricatus] Length = 617 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 13/196 (6%) Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHKN------CRIIVYSARP 73 W ++ + LL +I R++ ++ + +G K +I + + Sbjct: 421 WRSKKKIFTHLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIGGVMRGIEMMLEIRLRGA 480 Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131 G+ G +++K+R LS TN+ + ++ +A+LIAQ I+ +L R FR Sbjct: 481 GIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASLIAQDISFRLRDRKSFR 540 Query: 132 RAMKRAVQSAMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 V+ G+++ SGRL GAE++RTEC G+ R IDY +A Sbjct: 541 SIFYELVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASAK 600 Query: 189 AETAYGSCGIKVYVSL 204 T YG G+KV++S Sbjct: 601 VSTRYGILGVKVWISF 616 Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55 QK+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + + + Sbjct: 42 QKVNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNLRDYFGSIRPPTRINPFGFRLGRC 100 Query: 56 LIERTHKNCRIIVYSARPG 74 ++ + K I ++ R Sbjct: 101 ILHHSPKRTFIHLFLPRRP 119 >gi|223927818|gb|ACN23532.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVDHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIPISG 166 >gi|283050685|gb|ADB07779.1| ribosomal protein S3 [Prosphytochloa prehensilis] Length = 160 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 32/159 (20%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 +K N N +++ + +V +P ++A+ IA QL+ R Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNR 159 >gi|223927747|gb|ACN23486.1| ribosomal protein S3 [Halimeda cuneata] gi|223927750|gb|ACN23488.1| ribosomal protein S3 [Halimeda cuneata] Length = 166 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+RV ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIKISG 166 >gi|186920141|ref|YP_001874795.1| ribosomal protein S3 [Hemiselmis andersenii] gi|186461087|gb|ACC78249.1| ribosomal protein S3 [Hemiselmis andersenii] Length = 219 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 17/221 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------------CHLK 48 MGQKI L N WNS W+ + Y + EDL + YL+ HL Sbjct: 1 MGQKIVVNSLHLKKNKNWNSFWYVDFNAYLPVFREDLYLYLYLRSFSKLKYNILKRKHLY 60 Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKK---GTDIEKIRKKLSNMTNSEIHLSVNE 105 Q + K I R K+ + + KK ++++ +L N N + + V Sbjct: 61 QIEIVKCFIYRIDKSLVLNLQLMGLKTKQLKKSDFPFFMKQLLIRLKNFFNYKNNRFVIY 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 + A A +A LE+RV F+ M + + + G+++ GRLN + + Sbjct: 121 YKIGKSTALFTALRVATLLEKRVRFQSQMVKKI--IKQLNVAGIRISCKGRLNFVDRATK 178 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 G VPLQT++A+IDYG VA T G +KV++ ++ Sbjct: 179 AQLSSGSVPLQTIKANIDYGLIVANTKKGLQSVKVWILNKE 219 >gi|223927298|gb|ACN23262.1| ribosomal protein S3 [Halimeda borneensis] Length = 224 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 19/163 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++ + +P ++IGKKG ++ +K++ + S N+ + L Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 IA + + LE+R+ ++ K+ ++ + Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163 >gi|283050653|gb|ADB07755.1| ribosomal protein S3 [Oryza ridleyi] Length = 161 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 32/159 (20%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60 Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88 + I I++ +I++ P L+ K ++EK Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 +K N N +++ + +V +P ++A+ IA QL+ R Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNR 159 >gi|71057455|emb|CAJ18180.1| ribosomal protein S3 [Halimeda macrophysa] Length = 166 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED IR L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFIRTLLSEKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHIEIVIYAQKPDLLIGKKGENLEIFQKQIKKSIFQYREIEWNSNLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIKISG 166 >gi|56181021|gb|AAV83626.1| ribosomal protein S3 [Halimeda magnidisca] gi|56181024|gb|AAV83628.1| ribosomal protein S3 [Halimeda magnidisca] gi|223927974|gb|ACN23635.1| ribosomal protein S3 [Halimeda gigas] gi|223927977|gb|ACN23637.1| ribosomal protein S3 [Halimeda gigas] Length = 166 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKMS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKR-QKQSTLGMKIQISG 166 >gi|223927759|gb|ACN23494.1| ribosomal protein S3 [Halimeda cuneata] Length = 156 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+RV ++ Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140 >gi|223927804|gb|ACN23523.1| ribosomal protein S3 [Halimeda discoidea] gi|223927810|gb|ACN23527.1| ribosomal protein S3 [Halimeda discoidea] gi|223927813|gb|ACN23529.1| ribosomal protein S3 [Halimeda discoidea] gi|223927815|gb|ACN23530.1| ribosomal protein S3 [Halimeda discoidea] Length = 154 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LERR+ ++ Sbjct: 121 ASSAIADFIVEHLERRIPYK 140 >gi|56180970|gb|AAV83592.1| ribosomal protein S3 [Halimeda discoidea] gi|56180973|gb|AAV83594.1| ribosomal protein S3 [Halimeda discoidea] gi|56180976|gb|AAV83596.1| ribosomal protein S3 [Halimeda discoidea] gi|223927863|gb|ACN23562.1| ribosomal protein S3 [Halimeda discoidea] gi|223927866|gb|ACN23564.1| ribosomal protein S3 [Halimeda discoidea] gi|223927869|gb|ACN23566.1| ribosomal protein S3 [Halimeda discoidea] gi|223927885|gb|ACN23576.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|56181027|gb|AAV83630.1| ribosomal protein S3 [Halimeda taenicola] gi|56181030|gb|AAV83632.1| ribosomal protein S3 [Halimeda taenicola] gi|56181033|gb|AAV83634.1| ribosomal protein S3 [Halimeda taenicola] gi|56181036|gb|AAV83636.1| ribosomal protein S3 [Halimeda taenicola] Length = 166 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDYFVRTLLLEKYNRAGFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I+V++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVVHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|223927777|gb|ACN23506.1| ribosomal protein S3 [Halimeda cuneata] gi|223927780|gb|ACN23508.1| ribosomal protein S3 [Halimeda cuneata] gi|223927783|gb|ACN23510.1| ribosomal protein S3 [Halimeda cuneata] gi|223927786|gb|ACN23512.1| ribosomal protein S3 [Halimeda cuneata] gi|223927789|gb|ACN23514.1| ribosomal protein S3 [Halimeda cuneata] gi|223927792|gb|ACN23516.1| ribosomal protein S3 [Halimeda cuneata] gi|223927797|gb|ACN23519.1| ribosomal protein S3 [Halimeda cuneata] Length = 154 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+RV ++ Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140 >gi|302748735|gb|ADL63848.1| ribosomal protein S3 [Euphorbia milii] Length = 469 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++K+R LSN T Sbjct: 300 KVMELIEKFINLGEIGEL---IKGIEMMIEIILRNRTIPYGYNSYLNEMKKMRSLLSNRT 356 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ A+LIAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 357 NTNTLIESVKIKSVYQCASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVKGIRI 416 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 417 SCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYAFAEVSTRYGILGVKVWISY 469 >gi|56180985|gb|AAV83602.1| ribosomal protein S3 [Halimeda discoidea] gi|56180988|gb|AAV83604.1| ribosomal protein S3 [Halimeda discoidea] gi|223927888|gb|ACN23578.1| ribosomal protein S3 [Halimeda discoidea] gi|223927891|gb|ACN23580.1| ribosomal protein S3 [Halimeda discoidea] gi|223927894|gb|ACN23582.1| ribosomal protein S3 [Halimeda discoidea] gi|223927897|gb|ACN23584.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|56181362|gb|AAV83775.1| ribosomal protein S3 [Halimeda simulans] Length = 260 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPGAGELSGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|261888186|gb|ACY06041.1| ribosomal protein S3 [Volvox carteri f. nagariensis] Length = 742 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVI 152 + I + A+++A SI LE+R FR +K+A + R GVK+ Sbjct: 625 IPKISIKFFSVKTTDILEKASIVADSIVDALEKRKAFRGVIKKAKEDLMRRRRVKGVKIQ 684 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 SGRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++ Sbjct: 685 VSGRLNGAEIARSEWVRAGRVPLQTLRANIDYSYRTANTIYGIIGVKVWIFKG 737 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA + Y + ED +R+ L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYGYSQSVFEDHMLRKTLLNLFSN 51 >gi|223927900|gb|ACN23586.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P + IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDIFIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|288191251|gb|ADC43978.1| ribosomal protein S3 [Trigoniastrum hypoleucum] Length = 500 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 SGRPKGAEIARTECGKYGKTSRNVFNQKIDYALAEVSTRYGILGVKVWISY 494 >gi|56181342|gb|AAV83765.1| ribosomal protein S3 [Halimeda monile] Length = 291 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 +N +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IENHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|303243484|ref|ZP_07329826.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1] gi|302486045|gb|EFL48967.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1] Length = 219 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 4/187 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EI 99 EYL+ L +AG + + I++T RI V++ +PG +IG+KG ++++ + ++N Sbjct: 18 EYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVKELTETIANKYGVENP 77 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + V ++ P+++ ++AQ IA LER + FRR AV+ M GA G+ +I SG+L G Sbjct: 78 QIEVKQIQNPDLDPEVVAQKIASSLERGMHFRRVAHSAVRRVMGAGAKGIVIIISGKLTG 137 Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 E SRTE ++EG + + + +A+ G G+ V + + V + I Sbjct: 138 -ERSRTEKFMEGYMKHCGEPSEVLVKKAHKLAKLKLGIIGVTVKIMPPEIVLPDEIVIRD 196 Query: 218 AEHRVVE 224 V E Sbjct: 197 GAGEVQE 203 >gi|223927903|gb|ACN23588.1| ribosomal protein S3 [Halimeda discoidea] gi|223927906|gb|ACN23590.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYAPKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061] gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii DSM 2375] gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374] gi|172048064|sp|A5UL83|RS3_METS3 RecName: Full=30S ribosomal protein S3P gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061] gi|222434612|gb|EEE41777.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii DSM 2375] gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374] Length = 250 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 7/192 (3%) Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 + E LK I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G ++ Sbjct: 4 KDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVRA 63 Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 I L N + V EV PE+N ++A IA L+R + FRR ++ M G Sbjct: 64 ITNTLKNDFGLDNPQIEVKEVSVPELNPKIMAYKIANMLQRGMHFRRVAYSTIRRIMGAG 123 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203 A GV+V SG++ G+ S ++EG + + ++ G A + G GI V + Sbjct: 124 AQGVEVTISGKIRGS-RSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVRIM 182 Query: 204 LRDEVSDSDSTI 215 + V I Sbjct: 183 PPETVLPDSVEI 194 >gi|223927807|gb|ACN23525.1| ribosomal protein S3 [Halimeda discoidea] gi|223927918|gb|ACN23598.1| ribosomal protein S3 [Halimeda discoidea] Length = 154 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|223927980|gb|ACN23639.1| ribosomal protein S3 [Halimeda gigas] gi|223927983|gb|ACN23641.1| ribosomal protein S3 [Halimeda gigas] Length = 166 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ K+ ++ + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKR-QKQSILGMKIQISG 166 >gi|223927774|gb|ACN23504.1| ribosomal protein S3 [Halimeda cuneata] Length = 149 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P L+IGKKG ++E +K++ NS + + + Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+RV ++ Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140 >gi|223927428|gb|ACN23341.1| ribosomal protein S3 [Halimeda gracilis] Length = 138 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W++ Y + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYS-KKYYSKYVLEDHFLRTILQKKYSRAGFEKIQISRK 59 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 + I++++ +P ++IGKKG ++E +K++ + + ++ L V K + IA Sbjct: 60 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILYVLRCKKSASS---IADF 116 Query: 120 IAQQLERRVVFRRAM 134 I Q LE+RV ++ Sbjct: 117 IVQNLEKRVPYKLVF 131 >gi|629469|pir||S40457 ribosomal protein S3 - Chlamydomonas reinhardtii chloroplast gi|460874|gb|AAB29391.1| orf712=ribosomal protein Rps3 homolog [Chlamydomonas reinhardtii, 137c mt+, Peptide Chloroplast, 712 aa] Length = 712 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150 I + A+ +A SI LE+R FR +K+A + + VK Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKVVK 653 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++ Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA + Y + ED +R L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51 >gi|56180982|gb|AAV83600.1| ribosomal protein S3 [Halimeda discoidea] Length = 166 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LE+R+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|302749127|gb|ADL64043.1| ribosomal protein S3 [Zelkova serrata] Length = 470 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + + + G+ ++ I + + G +++K+R LSN T Sbjct: 297 KVMKLIDKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 353 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 354 NTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 413 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 414 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 466 >gi|246880795|gb|ACS95107.1| ribosomal protein S3 [Dunaliella salina] Length = 706 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 13/139 (9%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 I K+ + + I + + A+++A S+ LE+R FR+ +K+ Sbjct: 566 IEKQRNMYIDNVQLTPKI---AIKFYSVKEKSVKAKASIVADSVVDALEQRSSFRKIIKK 622 Query: 137 AVQSAMR----------FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186 A + MR GVK+ SGRLNGAE++R+E GRVPLQTLRA++DY Sbjct: 623 AKEDLMRSPISSSDGKINRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANLDYSY 682 Query: 187 AVAETAYGSCGIKVYVSLR 205 A T YG G+KV++ Sbjct: 683 KTANTIYGIIGVKVWIFKG 701 Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREY---LQCHLKQAGVAKI 55 MGQK++P+ R+G+ S+WFA ++Y + ED +R+ L L K Sbjct: 1 MGQKVHPLGLRVGITKKHQSQWFARFHKNKYAQSVLEDRMLRQTLTQLFPQLLNPVFKKQ 60 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 + +I GLI + G I L + + ++ + V + + Sbjct: 61 RDNESSIAPKITQIKIERGLIPYEIGIQIHAENCDLIKSSIENLKINSDFVSRLQKTRRY 120 Query: 116 IAQ 118 Sbjct: 121 FQH 123 >gi|223927738|gb|ACN23480.1| ribosomal protein S3 [Halimeda cuneata] Length = 159 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112 + I++++ +P ++IGKK +++ ++++ +I + + + + +IN Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151 >gi|170290796|ref|YP_001737612.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8] Length = 251 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 7/203 (3%) Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y + E K+ E+++ +AG + I T I VY PG++IG+ G + Sbjct: 10 YKKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSK 69 Query: 86 KIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 +I + ++ +V KP ++ ++A IA+++ + +++ A+ M Sbjct: 70 RISDILKEELGIQNPYIQAKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMAE 129 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYV 202 GA GV++ SG+ G++ +R E + EG + Q +++Y G G++V + Sbjct: 130 GAKGVEIRLSGKF-GSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRI 188 Query: 203 SLRDEVSDSDSTIPAAEHRVVEK 225 I E + + Sbjct: 189 VKPGVRGPDAVVIKEDEIERIRE 211 >gi|223927912|gb|ACN23594.1| ribosomal protein S3 [Halimeda discoidea] Length = 149 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|295154448|gb|ADF83133.1| ribosomal protein S3 [Lepturidium insulare] Length = 166 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 17/166 (10%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAE 166 >gi|223927915|gb|ACN23596.1| ribosomal protein S3 [Halimeda discoidea] gi|223927921|gb|ACN23600.1| ribosomal protein S3 [Halimeda discoidea] gi|223927924|gb|ACN23602.1| ribosomal protein S3 [Halimeda discoidea] gi|223927927|gb|ACN23604.1| ribosomal protein S3 [Halimeda discoidea] gi|223927930|gb|ACN23606.1| ribosomal protein S3 [Halimeda discoidea] gi|223927933|gb|ACN23608.1| ribosomal protein S3 [Halimeda discoidea] gi|223927936|gb|ACN23610.1| ribosomal protein S3 [Halimeda discoidea] gi|223927939|gb|ACN23612.1| ribosomal protein S3 [Halimeda discoidea] Length = 154 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|302748539|gb|ADL63750.1| ribosomal protein S3 [Androsace sarmentosa] Length = 481 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 6/182 (3%) Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 +Y LL +D K+ E ++ + G+ ++ I+ II+ + R +++K Sbjct: 298 RKYWNLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKK 355 Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---M 142 +R LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M Sbjct: 356 MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVM 415 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 + G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++ Sbjct: 416 KKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWI 475 Query: 203 SL 204 S Sbjct: 476 SY 477 >gi|302748979|gb|ADL63969.1| ribosomal protein S3 [Qualea sp. Chase 168] Length = 505 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 323 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ QL + FR + + V+ M+ G +G+++ Sbjct: 382 NTNIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIISKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++ + Sbjct: 442 SGRSEGAEIARTECVKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIYYSKKKGGR 499 >gi|302748981|gb|ADL63970.1| ribosomal protein S3 [Quercus alba] Length = 500 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 ++ E ++ + G+ + I+ II+ + R +++K++ LSN T + Sbjct: 327 RVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMQSLLSNKTKT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 386 NTLIDSVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496 >gi|56181320|gb|AAV83754.1| ribosomal protein S3 [Halimeda incrassata] Length = 210 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162 +++ A + + LE+R+ ++ K+ Q + G +A+ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179 Query: 163 SRT--ECYLEGRV 173 + E E V Sbjct: 180 THMGPETISERSV 192 >gi|288560114|ref|YP_003423600.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1] gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1] Length = 251 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 4/181 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTN 96 +I EYL+ L++AG + I+ T +IVY+ RPG++IG+ G + I + + Sbjct: 15 RIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVRAITQSLKTKFDL 74 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EV PE+NA ++A IA L+R + FRR ++ M GA GV+V SG+ Sbjct: 75 DNPQVEVKEVAVPELNARIMASKIANMLQRGMHFRRVAYSTIRKIMGAGAQGVEVTISGK 134 Query: 157 LNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 + G+ S + EG + A + G A A G GI V + + Sbjct: 135 IRGS-RSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVVRIMPPEATLPDKVD 193 Query: 215 I 215 I Sbjct: 194 I 194 >gi|223927401|gb|ACN23323.1| ribosomal protein S3 [Halimeda copiosa] Length = 147 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 14/145 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ + S+W+A EY + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQSHLSQWYASKKEYSKYVLEDNFLRTILPKKYPKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM----------TNSEIHLSVNEVPKP 109 + I++++ +PG++IGKKG ++ +K++ +++L V Sbjct: 61 IEGHIEIVIHAQKPGILIGKKGENLGTFQKEIKKFLSLYNTDSDSQKPKVYLYVIRCKTS 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM 134 + IA + + LE+RV ++ Sbjct: 121 ASS---IADFLIENLEKRVPYKLVF 142 >gi|288191154|gb|ADC43930.1| ribosomal protein S3 [Moultonianthus leembruggianus] Length = 505 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 330 KVMELIEKFINLGGIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 386 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 387 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMTKGVEGIRI 446 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++R+EC G+ IDY A T YG G+KV++S Sbjct: 447 CCSGRLEGAEIARSECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 499 >gi|302748903|gb|ADL63931.1| ribosomal protein S3 [Nitraria retusa] Length = 503 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ T I + G+ G +++K+R LSN T Sbjct: 322 KVMELIEKFINLGGIGEL---ITGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 378 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL +R FR + V+ M G +G+++ Sbjct: 379 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMNKGVEGIRI 438 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 439 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 498 >gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis] Length = 236 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 9/193 (4%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 + + + ++ E+L LK AG + +++T RI +Y RPGL+IG+KGT I+ Sbjct: 9 KNNFRNM-----ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIK 63 Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 + K +SV EV PE+N ++ IAQ +ER FRRA ++ + M Sbjct: 64 DLMTKIEQKFGLQNPQISVLEVTNPELNPHIMCNRIAQLIERGTAFRRAAMWSLNTIMNA 123 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYV 202 GA GV+V+ SG+L E + E + G VP A + G + T G GI++ + Sbjct: 124 GALGVEVVISGKLR-TERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 182 Query: 203 SLRDEVSDSDSTI 215 + + + Sbjct: 183 ASKAALPQEFELK 195 >gi|288191289|gb|ADC43997.1| ribosomal protein S3 [Afrostyrax sp. Cheek 5007] Length = 507 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 332 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 390 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 391 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 450 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 451 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 501 >gi|302748647|gb|ADL63804.1| ribosomal protein S3 [Chrysolepis sempervirens] Length = 500 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 ++ E ++ + G+ + I+ II+ + R +++K+R LSN T + Sbjct: 327 RVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 386 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496 >gi|223927909|gb|ACN23592.1| ribosomal protein S3 [Halimeda discoidea] Length = 149 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IG+KG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|56181000|gb|AAV83612.1| ribosomal protein S3 [Halimeda discoidea] gi|223927944|gb|ACN23615.1| ribosomal protein S3 [Halimeda discoidea] gi|223927947|gb|ACN23617.1| ribosomal protein S3 [Halimeda discoidea] gi|223927950|gb|ACN23619.1| ribosomal protein S3 [Halimeda discoidea] Length = 165 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRSKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165 >gi|302749049|gb|ADL64004.1| ribosomal protein S3 [Stachyurus praecox] Length = 501 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 446 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496 >gi|291334067|gb|ADD93740.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S05-C114] Length = 99 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 59/85 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI FRLGV W++RW+A +Y + ED IR +L+ L+ A V +I+IER Sbjct: 1 MGQKVNPIGFRLGVRRNWSARWYANKKDYSQFMEEDNMIRGFLEKKLRYASVPRIVIERA 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIE 85 R+ +++ARPG++IG+KG +++ Sbjct: 61 STRTRVTIWTARPGIVIGRKGQELD 85 >gi|288191223|gb|ADC43964.1| ribosomal protein S3 [Tetracoccus dioicus] Length = 505 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + + M+ G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSILVKNIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|56181282|gb|AAV83735.1| ribosomal protein S3 [Halimeda incrassata] Length = 225 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 17/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ P+ FRLG+ S+W+A Y L ED +R L +AG I I R Sbjct: 1 MGQKVXPLGFRLGITQPHLSQWYASKKYYSKYLXEDHFLRTILPKKYAKAGFENINISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115 + I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120 Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177 >gi|302748567|gb|ADL63764.1| ribosomal protein S3 [Barbeuia madagascariensis] Length = 497 Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKVWISY 494 >gi|299830451|ref|YP_003734822.1| ribosomal protein S3 [Pythium ultimum] gi|299830488|ref|YP_003734859.1| ribosomal protein S3 [Pythium ultimum] gi|269810828|gb|ACZ43857.1| ribosomal protein S3 [Pythium ultimum] gi|269810865|gb|ACZ43894.1| ribosomal protein S3 [Pythium ultimum] Length = 251 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 44/249 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL N W+S+W +EY LLH DL+IR+Y + + K + K+ Sbjct: 1 MGQKIIPISLRLNKNENWHSKWIVEKNEYSNLLHFDLEIRKYFENIFNYKNLKLIKLNTV 60 Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRK--------------- 89 +T KN I +Y + + K +I+ K Sbjct: 61 KTSKNINIYIYVRQHSKNFYRLPYNKIINHLNLYYKNNNIKLFVKNVKLKDLKILKKKLG 120 Query: 90 ------KLSNMTNSEIHLSVNEVPK--PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 K +N N ++ + N +I+ I Q LER+ ++ +K Sbjct: 121 RIFRFIKKNNKINKDVKKMIYNFSYALYTKNINMISYYIKQSLERKKSHKKYIKNINNIL 180 Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 F G ++ GRLNG++ + Y +G++PL +L+ I Y +T G C Sbjct: 181 QEFFRMFSNFIGYRLQFKGRLNGSKRKKKLVYQKGKIPLNSLKYDIKYHFNEFKTPSGIC 240 Query: 197 GIKVYVSLR 205 IK++V L+ Sbjct: 241 SIKLWVFLK 249 >gi|223927741|gb|ACN23482.1| ribosomal protein S3 [Halimeda cuneata] Length = 162 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112 + I++++ +P ++IGKK +++ ++++ +I + + + + +IN Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151 >gi|56181300|gb|AAV83744.1| ribosomal protein S3 [Halimeda incrassata] Length = 219 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109 +N I++ +P ++IGKKG +++K+ + + + ++ L V + Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157 >gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB] gi|171460840|sp|A6UQ49|RS3_METVS RecName: Full=30S ribosomal protein S3P gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB] Length = 211 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 9/201 (4%) Query: 30 GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEK 86 + E L I EY + L +AG + + +++T RI V++ +PG +IG+KG ++ Sbjct: 8 AENVSETL-IDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVKELTD 66 Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146 ++ + N +I + E P+++ ++ IA LE+ + FR+ AV+ M GA Sbjct: 67 TLTEVYKVENPQIEVKPLE--TPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVMAAGA 124 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSL 204 GV +I SG+L+G E SRTE +++G + A + +A+ G G+ V + Sbjct: 125 KGVAIIISGKLSG-ERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTVKIMR 183 Query: 205 RDEVSDSDSTIPAAEHRVVEK 225 D + I + E + V + Sbjct: 184 PDVSLPDEIIILSGEIKEVTE 204 >gi|56181003|gb|AAV83614.1| ribosomal protein S3 [Halimeda discoidea] gi|56181006|gb|AAV83616.1| ribosomal protein S3 [Halimeda discoidea] Length = 165 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFVRTILSEKYKRAKFVKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + + +I+ Sbjct: 61 IEDHFEIVIHAQKPEILIGKKSETLKNFQKQIKKFIFQYRQIEWNSKLKVIVYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165 >gi|269812141|gb|ACZ44439.1| ribosomal protein S3 [Pythium ultimum] gi|269812178|gb|ACZ44476.1| ribosomal protein S3 [Pythium ultimum] Length = 251 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 44/249 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL N W+S+W +EY LLH DL+IR+Y + + K + K+ Sbjct: 1 MGQKIIPISLRLNKNENWHSKWIVEKNEYSNLLHFDLEIRKYFENIFNYKNLKLIKLNTV 60 Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRK--------------- 89 +T KN I +Y + + K +I+ K Sbjct: 61 KTSKNINIYIYVRQHSKNFYRLPYNKIINHLNLYYKNNNIKLFVKNVKLKDLKILKKKLG 120 Query: 90 ------KLSNMTNSEIHLSVNEVPK--PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 K +N N ++ + N +I+ I Q LER+ ++ +K Sbjct: 121 RIFRFIKKNNKINKDVKKMIYNFSYALYTKNINMISYYIKQSLERKKSHKKYIKNINNIL 180 Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 F G ++ GRLNG++ + Y +G++PL +L+ I Y +T G C Sbjct: 181 QEFFRMFSNFIGYRLQFKGRLNGSKRKKKLVYQKGKIPLNSLKYDIKYHFNEFKTPSGIC 240 Query: 197 GIKVYVSLR 205 IK +V L+ Sbjct: 241 SIKFWVFLK 249 >gi|223927395|gb|ACN23319.1| ribosomal protein S3 [Halimeda fragilis] Length = 183 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 26/183 (14%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++PI FRLG+ S+W+A Y + ED +R L+ +AG KI I R Sbjct: 1 MGQKVHPIGFRLGITQLHLSQWYASKKYYSKYVLEDHFLRTILKKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTN-------------------- 96 + I+++ +P ++IGKKG ++I+K + Sbjct: 61 IENHIEIVIHVQKPAVLIGKKGPTEGLQKEIKKLIFKYRGLSSGFNEPNQGPNDNDLKRL 120 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD--GVKVIAS 154 + + K +A+ IA I + LE+RV ++ ++ G+KV S Sbjct: 121 KVVLYVIKCKTKTNASASSIADFIIENLEKRVPYKIVFVLLKKNLKYNDQKPLGMKVQIS 180 Query: 155 GRL 157 GRL Sbjct: 181 GRL 183 >gi|288191114|gb|ADC43910.1| ribosomal protein S3 [Hydnocarpus sp. Chase 1301] Length = 505 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 499 >gi|56181350|gb|AAV83769.1| ribosomal protein S3 [Halimeda simulans] Length = 275 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 23/166 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED + L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLXTILPKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101 +N I++ +P ++IGKKG +++K+ + + + ++ L Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120 Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144 V + +++ A + + LE+R+ ++ K+ ++ + Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165 >gi|156937383|ref|YP_001435179.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I] gi|172044464|sp|A8AA20|RS3_IGNH4 RecName: Full=30S ribosomal protein S3P gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I] Length = 241 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 12/205 (5%) Query: 26 GSEYGALLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG 81 E +K+ EYL G +K+ +++T R+I+Y+ R G IIG++G Sbjct: 5 KKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRG 64 Query: 82 TDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I++I K L ++V +V +PE++A ++A +A L+R FRRA ++ Sbjct: 65 QTIKQITKVLEEWFGIPNPQVTVVKVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRR 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL---QTLRAHIDYGTAVAETAYGSCG 197 M GA G +V SG+L G E +R E Y+ G+V Q +R D A G G Sbjct: 125 IMGAGAIGAQVKVSGKLRG-ERARFEKYIAGKVYKSGNQVVRLT-DRAIAHVLLKVGVEG 182 Query: 198 IKVYVSLR--DEVSDSDSTIPAAEH 220 ++V +S + +E D + I + E Sbjct: 183 VEVIISKKSEEERPDDEVRIKSPEE 207 >gi|223927883|gb|ACN23575.1| ribosomal protein S3 [Halimeda discoidea] Length = 157 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|302748826|gb|ADL63893.1| ribosomal protein S3 [Ixonanthes icosandra] Length = 500 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 494 >gi|1173301|sp|P27754|RT03_OENBE RecName: Full=Ribosomal protein S3, mitochondrial gi|632234|pir||S43767 ribosomal protein S3 - evening primrose mitochondrion gi|13191|emb|CAA48894.1| ribosomal protein S3 [Oenothera berteroana] Length = 550 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 379 KVMELIEKFIDLGGIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 438 NTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 498 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 548 Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P K + K+ + Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRGKKSRPGKEKARWW 98 >gi|9695403|ref|NP_037625.1| ribosomal protein S3 [Phytophthora infestans] gi|6692655|gb|AAF24798.1|U17009_31 ribosomal protein S3 [Phytophthora infestans] gi|58202000|gb|AAW67055.1| ribosomal protein S3 [Phytophthora infestans] gi|58202047|gb|AAW67101.1| ribosomal protein S3 [Phytophthora infestans] Length = 267 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 44/249 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNDNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60 Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------KGTDIEKIRKKLSNM- 94 +T N + +Y + K K + K N+ Sbjct: 61 KTSNNINVYIYIQKNAKKYYKLSYNKLINNLNIYYPNNNIKLFIKNIQFFEFIKLRKNLK 120 Query: 95 -------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 N + + N +I I Q LER+ ++ + Sbjct: 121 KIFDKIKKKNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINNIDNML 180 Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 F G ++ GRLN ++ + + +G++PL TL I Y +T G C Sbjct: 181 QEFFQMFSNFIGYRLQFKGRLNKSKRKKKMNFQKGKIPLNTLDYDIKYHFNEFKTPSGIC 240 Query: 197 GIKVYVSLR 205 IK+++ + Sbjct: 241 SIKLWIFFK 249 >gi|302748681|gb|ADL63821.1| ribosomal protein S3 [Cucurbita pepo] Length = 509 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93 ED I E ++ + G+ ++ I+ II+ + R +++K+R LSN Sbjct: 324 KEDKVI-ELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSN 381 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGV 149 T + + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+ Sbjct: 382 RTKTNTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFTKIVKDIPFGMKKGVEGI 441 Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 ++ SGR GAE++RTEC G+ IDY A T YG G+KV++S + + Sbjct: 442 RICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYKKQKK 501 Query: 210 DS 211 Sbjct: 502 GR 503 >gi|56180898|gb|AAV83544.1| ribosomal protein S3 [Halimeda cuneata] gi|56180901|gb|AAV83546.1| ribosomal protein S3 [Halimeda cuneata] gi|56180904|gb|AAV83548.1| ribosomal protein S3 [Halimeda cuneata] Length = 166 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+G+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRVGITQPHLSHWYASKKYYSKYVLEDHFVRTVLSEKYTRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG +++ +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLKIFQKQIKTFIFQYRQIEWNSKLKVILYIYRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LERR+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLERRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|323149030|ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|308206736|gb|ADO19873.1| ribosomal protein S3 [Vigna radiata] Length = 563 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 11/189 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + + I + + G +++K+R LSN T Sbjct: 378 KVMELIEKFIDLGRIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 434 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150 N+ + ++ +A+ IAQ I+ QL + R +F R +K + M+ G +G++ Sbjct: 435 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD-IPLVMKKGVEGIR 493 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 + SGR GAE++RTEC G+ IDY +A T YG G+KV++S + Sbjct: 494 ICCSGRSEGAEIARTECGKYGKTSHNVFNQKIDYASAEVSTRYGISGVKVWISYSKKKKG 553 Query: 211 SDSTIPAAE 219 + E Sbjct: 554 GRAISETYE 562 >gi|54606724|dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris] gi|54606764|dbj|BAD66787.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris] Length = 551 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGSNSYLNEVKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF YG L+++D+ +R Y L Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYF----GSIRPPTRLTFGF 55 Query: 61 HKNCRIIVYSARPGLI 76 II++ + I Sbjct: 56 RLGRCIIIHFQKRTFI 71 >gi|288191303|gb|ADC44004.1| ribosomal protein S3 [Fagus grandifolia] Length = 494 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 ++ E+++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 326 RVMEFIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 385 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIS 494 >gi|56180991|gb|AAV83606.1| ribosomal protein S3 [Halimeda discoidea] gi|223927953|gb|ACN23621.1| ribosomal protein S3 [Halimeda discoidea] gi|223927956|gb|ACN23623.1| ribosomal protein S3 [Halimeda discoidea] gi|223927959|gb|ACN23625.1| ribosomal protein S3 [Halimeda discoidea] gi|223927962|gb|ACN23627.1| ribosomal protein S3 [Halimeda discoidea] gi|223927965|gb|ACN23629.1| ribosomal protein S3 [Halimeda discoidea] Length = 165 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165 >gi|288191174|gb|ADC43940.1| ribosomal protein S3 [Sacoglottis gabonensis] Length = 498 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 442 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 492 >gi|272716766|gb|ACZ95686.1| ribosomal protein S3 [Zamia furfuracea] Length = 573 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 4/173 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L L G LI+ II+ + R +++K+R LS+ TN+ + Sbjct: 392 LMEKLIDLGGIGELIKGIGMMIEIILRNRRIPYGYNYYLNEVQKMRSLLSDGTNTNTLIG 451 Query: 103 VNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS---AMRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ QL FR + V+ M G+++ SGRL Sbjct: 452 SVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDMTCVMPKRVKGIRICCSGRLK 511 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 GAE++RTEC G+ IDY A T YG G+KV++S +E Sbjct: 512 GAEIARTECREYGKTSCNVFHQKIDYAFAKVYTRYGILGVKVWISYSNERKGR 564 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +++NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSDYY-YGRLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 ++ K I + R + ++G Sbjct: 60 CIVHHFPKRTFIHFFLPRRPRRLKRRGKS 88 >gi|288191295|gb|ADC44000.1| ribosomal protein S3 [Krameria lanceolata] Length = 499 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 327 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSLLSNRT 383 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 384 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRI 443 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVWISY 496 >gi|302748651|gb|ADL63806.1| ribosomal protein S3 [Citrus limon] Length = 504 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 322 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 441 SGRLEGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 498 >gi|302748869|gb|ADL63914.1| ribosomal protein S3 [Medicago sativa] Length = 501 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 5/184 (2%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D I E+++ + + ++ I+ II+ + R +++K+R Sbjct: 314 KLMVKDKVI-EFIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 371 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADG- 148 LSN TN+ + ++ +A+ IAQ I+ QL ++ FR ++ V+ G Sbjct: 372 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFRKIVKDIPLVMKKGV 431 Query: 149 -VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +++ SGR GAE++RTEC G+ IDY +A T YG G+KV++S + Sbjct: 432 GIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISYSKK 491 Query: 208 VSDS 211 Sbjct: 492 KGGR 495 >gi|302748671|gb|ADL63816.1| ribosomal protein S3 [Couroupita guianensis] Length = 450 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 LL +D K+ E + + G+ ++ I + + + G +++K+R Sbjct: 271 NLLGKD-KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVKKMR 326 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRF 144 LSN TN+ + ++ +A+ IAQ I+ Q ++ FR + V+ M+ Sbjct: 327 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKK 386 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 387 GVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 446 >gi|302749079|gb|ADL64019.1| ribosomal protein S3 [Ternstroemia stahlii] Length = 483 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 10/180 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 LL +D K+ E+++ + G+ ++ I + + G +++K+R Sbjct: 304 NLLGKD-KVMEWIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMR 359 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRF 144 LSN TN+ + ++ +A+ IAQ I+ Q ++R FR + V+ M+ Sbjct: 360 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRKKRRSFRSIFSKIVKDIPLGMKK 419 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 420 GVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|323649895|ref|YP_004237268.1| ribosomal protein S3 [Ricinus communis] gi|322394275|gb|ADW96032.1| ribosomal protein S3 [Ricinus communis] Length = 563 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 438 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGH 555 >gi|302748832|gb|ADL63896.1| ribosomal protein S3 [Krameria lanceolata] Length = 495 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 322 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSLLSNRT 378 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 379 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRI 438 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 439 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVWISY 491 >gi|302748571|gb|ADL63766.1| ribosomal protein S3 [Batis maritima] Length = 510 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + +++K+R LSN TN+ Sbjct: 328 KVMELIEKFINLGGIEEL-IKGIEMMIEIILRNRSIPYGYNSYLNEVKKMRSLLSNRTNT 386 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 387 NTLIESVKIKSVYQSAAPIAQDISFQLRNKRRSFRSIFSKIVKDIPFVMKKGVEGIRICC 446 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 447 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 504 >gi|288191156|gb|ADC43931.1| ribosomal protein S3 [Omphalea diandra] Length = 516 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 341 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 399 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 400 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 459 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 460 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 510 >gi|197131494|gb|ACH47265.1| ribosomal protein S3 [Erodium chrysanthum] Length = 289 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 79/142 (55%), Gaps = 1/142 (0%) Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122 + + ++ ++++ +K+ + ++ +S+ + KP+ + T++A A Sbjct: 140 KRKFHLKENVKLQVLRSGKLNLKENVEKVLHGEKRKLKISIFALEKPDGDPTILAAFFAN 199 Query: 123 QLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181 QL+ R+ FR+AM++ ++ A G G++V +GR+ G E++R E +GRV LQT+R Sbjct: 200 QLKSRIPFRKAMQQTMKRAEEEGRARGIQVQLAGRIEGKEIARVEWLRKGRVSLQTIRRK 259 Query: 182 IDYGTAVAETAYGSCGIKVYVS 203 ID+ + T +G GIK+++ Sbjct: 260 IDFCSTTVRTIHGVLGIKIWLF 281 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51 MGQKINP+ FRLG +S WF + EY L ED KIR+ +Q + Sbjct: 1 MGQKINPLGFRLGTTQEHHSIWFEQPKEYCEGLQEDQKIRDCIQNFIDNRRRRFPPTIEL 60 Query: 52 VAKILIERTHKNCRIIVYSARPGL 75 +++I IE+ +I+Y P Sbjct: 61 ISRIQIEKGTDLVHVIIYMGFPSW 84 >gi|295311662|ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|259156790|gb|ACV96652.1| ribosomal protein S3 [Citrullus lanatus] Length = 563 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 379 KVIELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + + + Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYKKKKKER 555 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG LL++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P K + K K+ Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKSKPGKEKGRWW 98 >gi|223927992|gb|ACN23647.1| ribosomal protein S3 [Halimeda gigas] gi|223927995|gb|ACN23649.1| ribosomal protein S3 [Halimeda gigas] Length = 149 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKMS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|302748597|gb|ADL63779.1| ribosomal protein S3 [Bursera sp. Qiu 94206] Length = 507 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501 >gi|56180994|gb|AAV83608.1| ribosomal protein S3 [Halimeda discoidea] Length = 165 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIIYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165 >gi|302749021|gb|ADL63990.1| ribosomal protein S3 [Schinus molle] Length = 507 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKKGGR 501 >gi|302748951|gb|ADL63955.1| ribosomal protein S3 [Phyllanthus angustifolius] Length = 505 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 382 NTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 499 >gi|302748893|gb|ADL63926.1| ribosomal protein S3 [Myrtus communis] Length = 502 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 320 KVMELIEKFIYLGGIVEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ QL +R FR + + + M+ G +G+++ Sbjct: 379 NTNIESVKIKSVYQSASPIAQEISFQLRNKRRSFRSIYSNIVKDIPLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISFSKKKGGR 496 >gi|288191194|gb|ADC43950.1| ribosomal protein S3 [Ochthocosmus longipedicellatus] Length = 475 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + ++ G +++K+R LSN T Sbjct: 300 KVMELIEKFINLGKIGEL---IKGIEMMIEIILRNRRIMYGYNSYLNEMKKMRSLLSNRT 356 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + +Q M+ G +G+++ Sbjct: 357 NTNTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIQLVMKKGVEGIRI 416 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 417 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 469 >gi|288191164|gb|ADC43935.1| ribosomal protein S3 [Suregada glomerulata] Length = 505 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRKKTREFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|288191122|gb|ADC43914.1| ribosomal protein S3 [Centroplacus glaucinus] Length = 501 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ ++R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEMKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKIKGG 501 >gi|188038608|gb|ACD46917.1| ribosomal protein S3 [Ginkgo biloba] Length = 578 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 6/145 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G ++ ++R LSN TN+ + E+ +A+LIAQ I+ Q Sbjct: 418 IGIILRNRRIPYGYNYYLNEVREMRSLLSNRTNTNTLIGSVEIESVYQSASLIAQDISFQ 477 Query: 124 LERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L + FR + V+ S M G G+++ SGRL GAE++RTEC G+ R Sbjct: 478 LRSKTRSFRSIFSQIVRDIPSVMPKGVRGIRICCSGRLKGAEIARTECRKYGKTSCNAFR 537 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 IDY +A T YG G+KV++S Sbjct: 538 HKIDYASAKVSTRYGILGVKVWISY 562 Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 +I K I ++ R + ++G Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKRRGKS 88 >gi|223928045|gb|ACN23682.1| ribosomal protein S3 [Halimeda tuna] gi|223928048|gb|ACN23684.1| ribosomal protein S3 [Halimeda tuna] gi|223928051|gb|ACN23686.1| ribosomal protein S3 [Halimeda tuna] gi|223928054|gb|ACN23688.1| ribosomal protein S3 [Halimeda tuna] gi|223928057|gb|ACN23690.1| ribosomal protein S3 [Halimeda tuna] gi|223928060|gb|ACN23692.1| ribosomal protein S3 [Halimeda tuna] Length = 165 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQQPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVIFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|302748683|gb|ADL63822.1| ribosomal protein S3 [Cupaniopsis anacardioides] Length = 499 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + + G +++K+R LSN T Sbjct: 329 KVMELIDKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 385 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVI 152 N+ + ++ +A+ IAQ I+ QL R FR + V++ M G +G+++ Sbjct: 386 NTNTLIESVKIKSVYQSASPIAQDISFQL-RNKTFRSIFSKIVKNIPLVMNKGVEGIRIC 444 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 CSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496 >gi|288191239|gb|ADC43972.1| ribosomal protein S3 [Paradrypetes subintegrifolia] Length = 498 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 385 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRAFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ L IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|288191176|gb|ADC43941.1| ribosomal protein S3 [Vantanea guianensis] Length = 515 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 340 KVMEFIDPFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 398 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 399 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 458 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 459 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 509 >gi|302748862|gb|ADL63911.1| ribosomal protein S3 [Manilkara zapota] Length = 484 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M G Sbjct: 362 LSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMNKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|302748687|gb|ADL63824.1| ribosomal protein S3 [Cyrilla racemiflora] Length = 490 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|288191188|gb|ADC43947.1| ribosomal protein S3 [Irvingia malayana] Length = 507 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + G+ G +I+K+R LSN T Sbjct: 332 KVMELIDKFINLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEIKKMRSLLSNRT 388 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 448 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 501 >gi|328775209|gb|AEB40000.1| ribosomal protein S3 [Funaria hygrometrica] Length = 535 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%) Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126 V+S KK LSN T + + ++ +A+LIAQ I+ +LE+ Sbjct: 402 KVHSLFSRYYYWKKMQFF------LSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQ 455 Query: 127 RVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 + FR+ + Q + G+++ SGRLNGAE+++TEC G L IDY Sbjct: 456 KKSFRQICRSTFQQIEKCQYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYA 515 Query: 186 TAVAETAYGSCGIKVYVSL 204 A A T YG G+KV+VS Sbjct: 516 KAQASTPYGILGVKVWVSY 534 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------VAK 54 M QKINPI RL +N + +S WF+ YG LL++D+ R+Y G + K Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSDYY-YGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINA 113 +I K I V+ G + K + + + +EI + + + + Sbjct: 60 FIIHHFPKRTFIHVFFLDRLSRSRHTGLGAIQSVKLIRRIDDATEIQRNEVKSRRYGYDD 119 Query: 114 TLIAQSIAQQLER 126 L + QL R Sbjct: 120 RLPSMHEIDQLLR 132 >gi|288191200|gb|ADC43953.1| ribosomal protein S3 [Durandea pentagyna] Length = 493 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ G+ ++ + I + + G +++K+R LSN T Sbjct: 318 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 374 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 375 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 434 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 435 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 487 >gi|56180997|gb|AAV83610.1| ribosomal protein S3 [Halimeda discoidea] Length = 165 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYXKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLS-----VNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ +I + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLXVIVYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165 >gi|288191162|gb|ADC43934.1| ribosomal protein S3 [Spathiostemon javensis] Length = 505 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +I+K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEIKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|58012161|gb|AAW62569.1| ribosomal protein S3 [Phytophthora infestans] Length = 275 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 44/249 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNDNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60 Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------KGTDIEKIRKKLSNM- 94 +T N + +Y + K K + K N+ Sbjct: 61 KTSNNINVYIYIQKNAKKYYKLSYNKLINNLNIYYPNNNIKLFIKNIQFFEFIKLRKNLK 120 Query: 95 -------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 N + + N +I I Q LER+ ++ + Sbjct: 121 KIFDKIKKKNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINNIDNML 180 Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 F G ++ GRLN ++ + + +G++PL TL I Y +T G C Sbjct: 181 QEFFQMFSNFIGYRLQFKGRLNKSKRKKKMNFQKGKIPLNTLDYDIKYHFNEFKTPSGIC 240 Query: 197 GIKVYVSLR 205 IK+++ + Sbjct: 241 SIKLWIFFK 249 >gi|288191144|gb|ADC43925.1| ribosomal protein S3 [Dalechampia spathulata] Length = 503 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+L+ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 328 KVMEFLEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 386 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 387 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFTKIVKDIPLVMKKGVEGIRICC 446 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 447 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 497 >gi|130076598|gb|ABO31957.1| ribosomal protein S3 [Tetracarpaea tasmanica] Length = 499 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|130076594|gb|ABO31955.1| ribosomal protein S3 [Saxifraga sarmentosa] Length = 507 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|56181048|gb|AAV83644.1| ribosomal protein S3 [Halimeda tuna] Length = 165 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|302748824|gb|ADL63892.1| ribosomal protein S3 [Ixerba brexioides] Length = 506 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 325 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 381 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501 >gi|302748782|gb|ADL63871.1| ribosomal protein S3 [Helwingia japonica] Length = 487 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 L E K+ E ++ + G+ ++ I + + + G +++K+R Sbjct: 308 NLMEKDKVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVKKMRS 364 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 365 LLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKG 424 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 425 VEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 483 >gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88] Length = 1089 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 834 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 886 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 887 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 946 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 947 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 1005 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 1006 KVKIMRGSDPEGKSGPQKSLPD 1027 >gi|288191261|gb|ADC43983.1| ribosomal protein S3 [Brunellia acutangula] Length = 506 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 331 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 389 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 390 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 449 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 450 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 500 >gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143] Length = 1054 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 799 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 851 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 852 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 911 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 912 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 970 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 971 KVKIMRGSDPEGKSGPQKSLPD 992 >gi|288191267|gb|ADC43986.1| ribosomal protein S3 [Crinodendron hookerianum] Length = 505 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.14.25] gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3P [Sulfolobus islandicus L.S.2.15] gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3P [Sulfolobus islandicus Y.G.57.14] gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3P [Sulfolobus islandicus Y.N.15.51] gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.16.27] gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.16.4] gi|284997900|ref|YP_003419667.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5] gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15] gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25] gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14] gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51] gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27] gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4] gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5] gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A] gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4] Length = 216 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 +KI EYL A A + + +T R+I+Y+ RP +IIG+ G +I+++ + + Sbjct: 3 VKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFG 62 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 +++ V PE+NA ++A +A LE+ FRRA +++ M GA G ++I SG Sbjct: 63 LENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISG 122 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L E +R E EG V Q L ID A+A G G++V ++ ++ D S Sbjct: 123 KLT-TERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIS 181 Query: 214 TIPAA 218 + Sbjct: 182 LKESP 186 >gi|91208873|ref|YP_539034.1| ribosomal protein S3 [Physcomitrella patens] gi|90991413|dbj|BAE93105.1| ribosomal protein S3 [Physcomitrella patens] Length = 535 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%) Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126 V+S KK LSN T + + ++ +A+LIAQ I+ +LE+ Sbjct: 402 KVHSLFSRYYYWKKMQFF------LSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQ 455 Query: 127 RVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 + FR+ + Q + G+++ SGRLNGAE+++TEC G L IDY Sbjct: 456 KKSFRQICRSTFQQIEKCQYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYA 515 Query: 186 TAVAETAYGSCGIKVYVSL 204 A A T YG G+KV+VS Sbjct: 516 KAQASTPYGILGVKVWVSY 534 Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------VAK 54 M QKINPI RL +N + +S WF+ YG LL++D+ R+Y G + K Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSDYY-YGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINA 113 +I K I V+ G + K + + + +EI + + + + Sbjct: 60 FIIHHFPKRTFIHVFFLDRLSRSRHTGLGAIQSVKLIRRIDDATEIQRNEVKSRRYGYDD 119 Query: 114 TLIAQSIAQQLER 126 L + QL R Sbjct: 120 RLPSMHEIDQLLR 132 >gi|302748788|gb|ADL63874.1| ribosomal protein S3 [Houttuynia cordata] Length = 483 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+A++ ++ II+ + +++KIR LSN TN+ Sbjct: 310 KVMELIEKLRDLGGIAEL-LKGIEMMMEIILKNRSIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 429 SGRLEGAEIARTECVKYGKTSCNVFHQKIDYASAEVSTRYGISGVKVWISY 479 >gi|543684|pir||S40459 ribosomal protein S3 - Chlamydomonas humicola chloroplast (fragment) Length = 682 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 I K+ T ++ ++ V A+++A S+ LE+R FR+ +K Sbjct: 560 IEKQRTIYTDNISLTPKISIKFYSVNAKSVK---AKASVVADSVVDALEKRKGFRKVIKD 616 Query: 137 AVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 A + MR G GVK+ SGRLNGAE++R+E GRVPLQTLRA++DY A T YG Sbjct: 617 AKEELMRTSGVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANLDYSYKTASTIYGI 676 Query: 196 CGIKVY 201 G+KV+ Sbjct: 677 IGVKVW 682 Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA ++Y + ED +RE L Q Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFNKNKYAQSVLEDRMLRETLTNLFPQ 51 >gi|272716756|gb|ACZ95680.1| ribosomal protein S3 [Gnetum montanum] Length = 684 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G ++ K+R LS+ TN+ ++ +A+LIAQ I+ Q Sbjct: 520 ISIILRNRRIPYGYNYYLNEVRKVRSLLSDRTNTNTFFGSVKIESVYQSASLIAQDISFQ 579 Query: 124 LERRVV---FRRAMKRAVQSAMRF------GADGVKVIASGRLNGAELSRTECYLEGRVP 174 L R FR + V+ G G+++ SGRL GAE++RTEC G+ Sbjct: 580 LRGRNRTRSFRSIFSQIVRDIPNPKVMPPKGVRGIRICCSGRLKGAEIARTECREYGKTS 639 Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + IDY +A T YG G+KV++S Sbjct: 640 INVFCQKIDYASAKVSTRYGILGVKVWISY 669 >gi|302748975|gb|ADL63967.1| ribosomal protein S3 [Polyosma sp. Johns 9558] Length = 490 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 311 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G++ IDY A T YG G+KV++S + Sbjct: 430 SGRSKGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 487 >gi|50261292|ref|YP_052900.1| ribosomal protein S3 [Saprolegnia ferax] gi|48237605|gb|AAT40654.1| ribosomal protein S3 [Saprolegnia ferax] Length = 296 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 47/253 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQKI PI RL W+S+W Y +LH DL++R+Y++ L ++ + I+ Sbjct: 1 MGQKIIPISLRLKNRKNWHSQWIVEKKNYAEILHFDLELRKYIETLLNNKKISTLQIKIN 60 Query: 61 HKNCRIIVYSARPGLI----IGKKGTDIEKIRKKLSNMTNSEIHL--------------- 101 + + +Y + K+ + + L+N N ++ Sbjct: 61 KVSKNLYIYVFVHNTFKKEILKKQSNILFHLNSYLNNKYNIKLFFLKAHFKLNNYQKNLR 120 Query: 102 -----------------------SVNEVPKPEINATLIAQSIAQQLERRVVFR---RAMK 135 S+ ++ +I++ I + ++++ + R + Sbjct: 121 FYIYKYLKKKRRRLKDKKILKFLSICQIAFTLGKMNIISKYIVRTIKKKKIHRGYLNFIN 180 Query: 136 RAVQSAMRFGAD--GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 R ++ + + G K+ GR+NGA+ R Y EGR+PL +L +I Y T Sbjct: 181 RILKEYFKMNSKILGYKLQVKGRVNGAKRKRKLVYQEGRIPLSSLDKNIQYTFDEFITKS 240 Query: 194 GSCGIKVYVSLRD 206 G C +K++ L+D Sbjct: 241 GVCSVKMWFYLKD 253 >gi|302748796|gb|ADL63878.1| ribosomal protein S3 [Hydrangea arborescens] Length = 483 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 479 >gi|288191118|gb|ADC43912.1| ribosomal protein S3 [Anthodiscus amazonicus] Length = 505 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T + Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTKT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC + IDY A T YG G+KV++S Sbjct: 449 SGRSKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|302748985|gb|ADL63972.1| ribosomal protein S3 [Quintinia verdonii] Length = 506 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 325 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G++ IDY A T YG G+KV++S + Sbjct: 444 SGRSKGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 501 >gi|302748643|gb|ADL63802.1| ribosomal protein S3 [Choristylis rhamnoides] Length = 493 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + G+ ++ I + + G +++KIR LSN T Sbjct: 325 KVMKLIEKFINLGGIGEL---IKGIEMMIEIIVRNRIIPYGYNSYLNEVKKIRSLLSNRT 381 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIS 493 >gi|302749065|gb|ADL64012.1| ribosomal protein S3 [Styrax japonicus] Length = 483 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|302748751|gb|ADL63856.1| ribosomal protein S3 [Garrya elliptica] Length = 483 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 479 >gi|302748989|gb|ADL63974.1| ribosomal protein S3 [Reinwardtia trigyna] Length = 505 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 382 KTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 499 >gi|223928039|gb|ACN23678.1| ribosomal protein S3 [Halimeda scabra] Length = 165 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + G+KV +G Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSXLGMKVQIAG 165 >gi|288191150|gb|ADC43928.1| ribosomal protein S3 [Lasiocroton bahamensis] Length = 507 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 332 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 390 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 391 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 450 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 451 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 501 >gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480] gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480] Length = 266 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPD 210 >gi|315055209|ref|XP_003176979.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893] gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893] Length = 266 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPD 210 >gi|288191209|gb|ADC43957.1| ribosomal protein S3 [Medusagyne oppositifolia] Length = 473 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 301 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 357 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151 N+ ++ ++ +A+ IAQ I+ QL ++ FR + +Q ++ G +G+++ Sbjct: 358 NTNTNIESVKIKSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIQLGLKKGVEGIRI 417 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 418 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 470 >gi|288191146|gb|ADC43926.1| ribosomal protein S3 [Hevea sp. Gillespie 4272] Length = 505 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIQSVFQSASSIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3P [Pyrococcus furiosus DSM 3638] gi|27734507|sp|Q8U004|RS3_PYRFU RecName: Full=30S ribosomal protein S3P gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638] Length = 210 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER + FRRA A+++ M GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + + Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPGARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + VE++ Sbjct: 193 IEI---IEKPVEEE 203 >gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3P [Desulfurococcus mucosus DSM 2162] gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162] Length = 222 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 4/192 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 L I E+L + K AG A + + RT R+++++ PG +IG+ G+ I+K+ L Sbjct: 18 LMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQTRFG 77 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++++++ V P++NA ++A I + LE+ + FRR + ++ M GA G ++I SG Sbjct: 78 LDNVNVTISPVVDPDLNARVVAFRIVRALEKEIPFRRVIMYMLKRVMDAGAVGAEIIVSG 137 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L G E + E G+V + + +D A A G G++V + + Sbjct: 138 KLRG-ERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPGIFGVEVVIVKPNIKLPDHV 196 Query: 214 TIPAAEHRVVEK 225 + A + +E+ Sbjct: 197 EVKALKPEEIEQ 208 >gi|223927986|gb|ACN23643.1| ribosomal protein S3 [Halimeda gigas] Length = 156 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|632229|pir||S40460 ribosomal protein S3 - Chlamydomonas frankii chloroplast (fragment) Length = 809 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 10/132 (7%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 I K+ ++ K + I + E A+++A SI LE+R FR+ +K Sbjct: 681 IEKQKIVSKENLKLTPKIC---IKFYSVKQKNLEAKASIVADSIIDALEKRKAFRKVIKD 737 Query: 137 AVQSAMRFGA-------DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 A ++ GVK+ SGRLNGAE++RTE GRVPLQTLRA+IDY A Sbjct: 738 AKENLTSNSRVNGIKLVKGVKIQVSGRLNGAEIARTEWVRAGRVPLQTLRANIDYSYKTA 797 Query: 190 ETAYGSCGIKVY 201 T YG G+KV+ Sbjct: 798 NTIYGIIGVKVW 809 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR--GSEYGALLHEDLKIR--------EYLQCHLKQA 50 MGQK++P FR+G+ S+WFA+ Y + ED +R E L LK+ Sbjct: 1 MGQKVHPFGFRVGITKKHQSQWFAKFHKYNYSQSVLEDRILRNTLLKIFPELLNPVLKKV 60 Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG 78 + T K +I + IG Sbjct: 61 QKREDDTTITPKITQIKIERGFIPYEIG 88 >gi|288191285|gb|ADC43995.1| ribosomal protein S3 [Ruptiliocarpon caracolito] Length = 509 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 334 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 392 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 393 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSNIVKDIPLVMKKGVEGIRICC 452 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 453 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 503 >gi|288191160|gb|ADC43933.1| ribosomal protein S3 [Pogonophora schomburgkiana] Length = 501 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2] gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2] Length = 210 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMNNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + D + Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + VE++ Sbjct: 193 IEI---IEKPVEEE 203 >gi|77556488|gb|ABA99284.1| Mitochondrial ribosomal protein S3, putative [Oryza sativa Japonica Group] Length = 752 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 369 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 425 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 426 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 485 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 486 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 538 >gi|288191190|gb|ADC43948.1| ribosomal protein S3 [Cyrillopsis paraensis] Length = 475 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + ++ G +++K+R L N T Sbjct: 300 KVMELIEKFINLGKIGEL---IKGIEMMIEIILRNRRIMYGYNSYLNEMKKMRSLLFNRT 356 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 357 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 416 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 417 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 469 >gi|302748723|gb|ADL63842.1| ribosomal protein S3 [Elaeocarpus obovatus] Length = 507 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 494 >gi|288191301|gb|ADC44003.1| ribosomal protein S3 [Prunus caroliniana] Length = 285 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + +++ I + + G +++K+R LSN T Sbjct: 117 KVMELIEKFIDLGRIGELIRGI---EMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 173 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 174 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPFLMKKGVGGIRI 233 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC + P IDY A T YG G+KV++S Sbjct: 234 CCSGRSKGAEIARTECGKYRKTPRNVFNQKIDYAPAEVSTRYGILGVKVWIS 285 >gi|288191152|gb|ADC43929.1| ribosomal protein S3 [Manihot grahamii] Length = 501 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIQSVFQSASSIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|288191237|gb|ADC43971.1| ribosomal protein S3 [Cassipourea lanceolata] Length = 495 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ + I + + G +++K+R LSN T Sbjct: 326 KVMELIEKLINLGRMGEL---KKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRT 382 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N++ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 383 NTKTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 442 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ L IDY A T YG G+KV++S Sbjct: 443 CCSGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|130076574|gb|ABO31945.1| ribosomal protein S3 [Heuchera micrantha] Length = 485 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 312 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 481 >gi|302748808|gb|ADL63884.1| ribosomal protein S3 [Icacina mannii] Length = 480 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN T++ Sbjct: 307 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTHT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 476 >gi|288191277|gb|ADC43991.1| ribosomal protein S3 [Plagiopteron suaveolens] Length = 512 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 337 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 393 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 394 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 453 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 454 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506 >gi|288191219|gb|ADC43962.1| ribosomal protein S3 [Heywoodia lucens] Length = 495 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|302748677|gb|ADL63819.1| ribosomal protein S3 [Crypteronia paniculata] Length = 478 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 296 KVMELIEKFIDLGGIVEL---IKGIEMMIEIILRKRQIPYGSNSYLNEVKKMRSLLSNRT 352 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 + ++ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 353 KTNTNIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFTKIVKDIPLVMKKGVEGIRI 412 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 413 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSQKKGGR 472 >gi|302748549|gb|ADL63755.1| ribosomal protein S3 [Aphanopetalum resinosum] Length = 490 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 309 KVMELIEKFIDLGGIEEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 365 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q +R+ FR + V+ M+ G +G+++ Sbjct: 366 NTNTLIESVKIKSVYQSASLIAQDISFQPRNKRISFRSIFSKIVKDIPLVMKKGVEGIRI 425 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY A T YG G+KV++S ++ Sbjct: 426 CCSGRLQGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSHKIKGR 485 >gi|288191293|gb|ADC43999.1| ribosomal protein S3 [Guaiacum sanctum] Length = 500 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 8/172 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ R I + + G +++K+R LSN T Sbjct: 326 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKT 382 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152 + + ++ +A+ IAQ I+ +L FR + V++ G+++ Sbjct: 383 KTNTLIESVKIKSVYQSASPIAQDISLKLRNTRSFRSIFSQIVKAIPLGMKKRVEGIRIC 442 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 443 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 494 >gi|272716741|gb|ACZ95672.1| ribosomal protein S3 [Nothotsuga longibracteata] Length = 558 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 7/170 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 + ++ K + I + I + + G ++ K+R LSN TN+ Sbjct: 389 KVIRLVEKFLSLGGIGVLMRGIGMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTN 448 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL R FR + V+ M G G+++ S Sbjct: 449 TLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCS 507 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GRL GAE++RTEC G+ R IDY +A T YG G+KV++S Sbjct: 508 GRLKGAEIARTECREYGKTSCNVFRHKIDYASAKVSTRYGILGVKVWISF 557 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLHLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|288191273|gb|ADC43989.1| ribosomal protein S3 [Gymnosporia arbutifolia] gi|288191275|gb|ADC43990.1| ribosomal protein S3 [Gymnosporia senegalensis] Length = 501 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + + G +++K+R LSN T Sbjct: 326 KVMELIEKFINLGGIGE---WIKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 382 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 383 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 442 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 443 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|288191142|gb|ADC43924.1| ribosomal protein S3 [Conceveiba martiana] Length = 512 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 337 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 395 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++ Sbjct: 396 NTLIESVKMKSVYQSASPIAQDISFQLKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 455 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 456 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506 >gi|56181340|gb|AAV83764.1| ribosomal protein S3 [Halimeda monile] Length = 275 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371] gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517] gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371] gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517] Length = 266 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPD 210 >gi|223927989|gb|ACN23645.1| ribosomal protein S3 [Halimeda gigas] Length = 155 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++Y+ +P ++IGKKG ++E +K++ NS++ + + Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFR 131 ++ IA I + LE+R+ ++ Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140 >gi|288191207|gb|ADC43956.1| ribosomal protein S3 [Luxemburgia octandra] Length = 455 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ +K G+ + I + + L G +++K+R LSN T Sbjct: 283 KVMEFIEKFIKLGGIGEF---LKGIEMMIEIILRKKRLPYGYNSYLNEMKKMRSLLSNRT 339 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 340 NTTTLIESVKIQSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 399 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY TA T YG GIKV++S Sbjct: 400 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 452 >gi|272716761|gb|ACZ95683.1| ribosomal protein S3 [Ginkgo biloba] Length = 578 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 6/145 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G ++ ++R LSN TN+ + E+ +A LIAQ I Q Sbjct: 418 IGIILRNRRIPYGYNYYLNEVREMRSLLSNRTNTNTLIGSVEIESVYQSAFLIAQDIFFQ 477 Query: 124 LERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L + FR + V+ S M G G+++ SGRL GAE++RTEC G+ R Sbjct: 478 LRSKTRSFRSIFSQIVRDIPSVMPKGVRGIRICCSGRLKGAEIARTECRKYGKTSCNAFR 537 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 IDY A T YG G+KV++S Sbjct: 538 HKIDYAFAKVFTRYGILGVKVWISY 562 Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGLIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 +I K I ++ R + ++G Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKRRGKS 88 >gi|223928036|gb|ACN23676.1| ribosomal protein S3 [Halimeda scabra] Length = 165 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P + IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDIXIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275] gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275] Length = 251 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + T II+ + ++G+KG Sbjct: 14 ADGVFYAEL-------NEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRR 66 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A +S+ +L + RRA ++ Sbjct: 67 IRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRY 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q ID T G G+ Sbjct: 127 VMEAGAKGCEVVISGKLRAA-RAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGVLGV 185 Query: 199 KVYVSLRDEVSDSDSTIPAA 218 KV + L + + ++P A Sbjct: 186 KVKIMLPEPKTRQKKSLPDA 205 >gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3P [Aeropyrum pernix K1] gi|6685919|sp|Q9YF78|RS3_AERPE RecName: Full=30S ribosomal protein S3P gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1] Length = 246 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 4/187 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 KI E+L + +AG +++ + +T I +++ RP LIIG++G I ++++ + Sbjct: 18 KIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRRLQEVFQTVFGL 77 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V + P ++A + A IA+ +ER + FRR A+ M GA GV++ SG+ Sbjct: 78 PNPRIRVEQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNGALGVEITISGK 137 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L +E +R E + G+V + +D +A A G G+ V + + D Sbjct: 138 LT-SERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIVKPGKPGDHVRI 196 Query: 215 IPAAEHR 221 E + Sbjct: 197 KSEEEVK 203 >gi|56180910|gb|AAV83552.1| ribosomal protein S3 [Halimeda cuneata] gi|56180913|gb|AAV83554.1| ribosomal protein S3 [Halimeda cuneata] Length = 160 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ + S W+A +Y + ED IR L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLIRTLLFKKYNRAKFDKITIFRN 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA----TL 115 + I +Y+ +P +++G G + + K S + + + + + + Sbjct: 61 IEDHVEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSRLKVILSIFCCKINASSA 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 IA I + LERR+ ++ + + R G+KV SG Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160 >gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892] gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892] gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818] gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97] Length = 266 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPD 210 >gi|272716705|gb|ACZ95654.1| ribosomal protein S3 [Pseudolarix amabilis] Length = 556 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 409 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTFIGSVKIFN-YQSASLIAQDI 467 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 468 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 527 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++SL Sbjct: 528 VFRHKIDYASAKVSTRYGILGVKVWISL 555 Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|188038017|gb|ACD46635.1| ribosomal protein S3 [Phytophthora ramorum] Length = 271 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 46/250 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL WNS+W +EY LLH DL+I++Y Q + K + I I Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFQNIFNYKNLKLIDINII 60 Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVN 104 +T KN + VY + +I+ K ++ ++ Sbjct: 61 KTSKNINVYVYIQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLK 120 Query: 105 EVPK-----------------------PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ N +I I Q LER+ ++ + + + Sbjct: 121 QIFDKIKKNNKINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179 Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 ++ G ++ GRLN ++ + + +G++PL TL I Y +T G Sbjct: 180 LQEFFKMFSNFIGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239 Query: 196 CGIKVYVSLR 205 C IK++V + Sbjct: 240 CSIKLWVFFK 249 >gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3P [Picrophilus torridus DSM 9790] gi|61215562|sp|Q6L1C1|RS3_PICTO RecName: Full=30S ribosomal protein S3P gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790] Length = 217 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 5/192 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT- 95 L + EYL+ AG + ++RT I +Y RPGL+IG+ GT I+++ + L Sbjct: 14 LLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKIKEMTETLEKRFA 73 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + V EV P++N + ++ IA LE+ +R+A +++ + A GV + G Sbjct: 74 IESPQIEVKEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKMIDLNAPGVLIRIGG 133 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +++G E +R + ++ G++ + R+ ++YG + A+ G G+ V + + D Sbjct: 134 KISG-ERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSVRILKSNYRLPDDI 192 Query: 214 TI-PAAEHRVVE 224 I P + VE Sbjct: 193 EIKPVKIEKEVE 204 >gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n] gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n] Length = 223 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 4/191 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 L I E+L + K AG A + + RT R+++++ PG +IG+ G+ I+K+ L N Sbjct: 18 LMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQNKFG 77 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++++++ V P++NA ++A I + LE+ + FRR M ++ M GA G ++I SG Sbjct: 78 LDNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVMDAGAIGAEIIISG 137 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L G E + E G+V + + +D A G G++V + Sbjct: 138 KLRG-ERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPGIFGVEVVIVKPGIKMPDHV 196 Query: 214 TIPAAEHRVVE 224 I + +E Sbjct: 197 EIKTLKPEELE 207 >gi|56181338|gb|AAV83763.1| ribosomal protein S3 [Halimeda monile] Length = 281 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|302748657|gb|ADL63809.1| ribosomal protein S3 [Clethra barbinervis] Length = 483 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|288191166|gb|ADC43936.1| ribosomal protein S3 [Tetrorchidium cf. macrophyllum Bell et al. 93-204] Length = 505 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|302748753|gb|ADL63857.1| ribosomal protein S3 [Geissois biagiana] Length = 507 Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + GV ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGGVGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 494 >gi|302749095|gb|ADL64027.1| ribosomal protein S3 [Tradescantia sp. Qiu 96059] Length = 478 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + G+ ++ I + + + G +++K+R L N T Sbjct: 309 KVMKLIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLFNRT 365 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 366 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 425 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 426 CCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVRISY 478 >gi|56181334|gb|AAV83761.1| ribosomal protein S3 [Halimeda monile] Length = 269 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|302748899|gb|ADL63929.1| ribosomal protein S3 [Nepenthes sp. 'Kosobe'] Length = 481 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + + + G+ + LI+ II+ + + +++K+R LSN TN+ Sbjct: 308 KVMKLIAKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 477 >gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3P [Sulfolobus solfataricus P2] gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2] gi|11134364|sp|Q9UXA0|RS3_SULSO RecName: Full=30S ribosomal protein S3P gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2] gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2] gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2] Length = 229 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 4/185 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 +KI EYL A A + + +T R+I+Y+ RP +IIG+ G +I+++ + + Sbjct: 16 VKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFG 75 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 +++ V PE+NA ++A +A LE+ FRRA +++ M GA G ++I SG Sbjct: 76 LENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISG 135 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L E +R E EG V Q L ID A+A G G++V ++ ++ D + Sbjct: 136 KLT-TERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIN 194 Query: 214 TIPAA 218 + Sbjct: 195 LKESP 199 >gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081] gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081] gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3] gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC 18188] Length = 270 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10] gi|150855583|gb|EDN30775.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10] Length = 263 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 18 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 71 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 131 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + E+ S Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQS 223 >gi|56181336|gb|AAV83762.1| ribosomal protein S3 [Halimeda monile] Length = 269 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|272716548|gb|ACZ95561.1| ribosomal protein S3 [Sciadopitys verticillata] Length = 786 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%) Query: 66 IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125 II+ + R ++ K+R LS+ TN+ + ++ +A+ IAQ I+ +L Sbjct: 645 IILKNRRIPYAYNYYLNEVRKMRSLLSDRTNTHTFIGSVKIESVYQSASPIAQDISLKLR 704 Query: 126 RRVV-FRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183 R FR + V+ R G G+++ SGR GAE++RTEC G+ ID Sbjct: 705 DRTRSFRSIFNQIVREMPRGQGVRGIRICCSGRSKGAEIARTECREYGKTSCNAFCHKID 764 Query: 184 YGTAVAETAYGSCGIKVYVSLR 205 Y A T YG G+KV++ Sbjct: 765 YAYAKVSTRYGILGVKVWIPFP 786 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 17/90 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL----------------Q 44 M K+NPI RL +N + +S WF+ YG +++D+ +REY + Sbjct: 1 MAPKVNPISVRLHLNRSSDSSWFSDYY-YGQFMYQDVNLREYFGSIRSPTRKRKRKRKRK 59 Query: 45 CHLKQAGVAKILIERTHKNCRIIVYSARPG 74 + + + ++ + K I ++ R Sbjct: 60 SNSLGFRLGRCILHHSPKRTFIHLFIPRRP 89 >gi|156051430|ref|XP_001591676.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980] gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70] Length = 263 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 18 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 71 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 131 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + E+ S Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQS 223 >gi|302748709|gb|ADL63835.1| ribosomal protein S3 [Diospyros virginiana] Length = 503 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ + I+ II+ + R +++K+R Sbjct: 324 NLLGKD-KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 381 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN++ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 382 LSNRTNTKTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 441 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 442 EGIRICCSGRSEGAEIARTECGKYGKASRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|288191215|gb|ADC43960.1| ribosomal protein S3 [Aporusa frutescens] Length = 502 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 327 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 386 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSISSKIVKDIPLVMKKGVEGIRICC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 446 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496 >gi|302748856|gb|ADL63908.1| ribosomal protein S3 [Maesa japonica] Length = 483 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|302748593|gb|ADL63777.1| ribosomal protein S3 [Bruguiera gymnorhiza] Length = 507 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMQKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 384 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFTKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ L IDY A T YG GIKV++S Sbjct: 444 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGIKVWISY 494 >gi|272716517|gb|ACZ95538.1| ribosomal protein S3 [Podocarpus macrophyllus] Length = 618 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 21/213 (9%) Query: 9 LF-RLGVNCT---WNSRWFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHK 62 F R+G T W S+ LL +I R++ ++ + +G K +I Sbjct: 409 GFQRIGGARTYLLWRSK----KKILTYLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIG 464 Query: 63 N------CRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + + G+ G +++K+R LS TN+ + ++ +A+ Sbjct: 465 GVMRGIEMMLEIRLRGAGIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSAS 524 Query: 115 LIAQSIAQQLERRVVFRRAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 IAQ I+ +L R FR R + M G+++ SGRL GAE++RTEC G Sbjct: 525 PIAQDISSRLRDRKSFRSIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYG 584 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + R IDY +A T YG G+KV++S Sbjct: 585 KTSCNAFRHRIDYASARVSTRYGILGVKVWISF 617 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55 QK+NPI RL +N + +S WF+ YG L+++D+ R+Y + + + + Sbjct: 42 QKVNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 100 Query: 56 LIERTHKNCRIIVYSARPG 74 ++ + K I ++ R Sbjct: 101 ILHHSPKRAFIHLFLPRRP 119 >gi|288191196|gb|ADC43951.1| ribosomal protein S3 [Lacistema aggregatum] Length = 516 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 339 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 397 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM-----RFGADGVKV 151 + ++ +A+ IAQ I+ QL + FR + V+ G +G+++ Sbjct: 398 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGKGVEGIRI 457 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 458 CCSGRSEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 510 >gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18] Length = 270 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|272716509|gb|ACZ95532.1| ribosomal protein S3 [Dacrydium elatum] Length = 614 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQAG-------VAKILIERTHKNCRIIVYSARP 73 W ++ LL +I R++ ++ + + +I + + Sbjct: 418 WRSKKKILTYLLRRSKEILRKHFNTYIHKGSGSVKKVILGRIEGVMRGIEMMLEIRLRGA 477 Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131 G+ G +++K+R LS TN+ + ++ +A+ IAQ I+ +L R FR Sbjct: 478 GIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISFRLRDRKSFR 537 Query: 132 RAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 R + M G+++ SGRL GAE++RTEC G+ R IDY +A Sbjct: 538 SIFYEPVRDIPLVMLKRVGGIRICCSGRLRGAEIARTECMEYGKTSCNAFRHRIDYASAK 597 Query: 189 AETAYGSCGIKVYVSL 204 T YG G+KV++S Sbjct: 598 VSTRYGILGVKVWISF 613 Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55 QK+NPI RL +N + +S WF YG L+++D+ R+Y + + + + Sbjct: 42 QKVNPISVRLHLNRSSDSSWFGDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 100 Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 ++ + K I ++ R + G Sbjct: 101 ILHHSPKRTFIHLFLPRRPPLNSNSGGGQRGRSGPGKRRW 140 >gi|288191198|gb|ADC43952.1| ribosomal protein S3 [Lozania pittieri] Length = 516 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 339 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 397 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM-----RFGADGVKV 151 + ++ +A+ IAQ I+ QL + FR + V+ G +G+++ Sbjct: 398 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGKGVEGIRI 457 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 458 CCSGRSEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 510 >gi|56181045|gb|AAV83642.1| ribosomal protein S3 [Halimeda tuna] gi|56181051|gb|AAV83646.1| ribosomal protein S3 [Halimeda tuna] gi|56181054|gb|AAV83648.1| ribosomal protein S3 [Halimeda tuna] gi|56181057|gb|AAV83650.1| ribosomal protein S3 [Halimeda tuna] gi|223928066|gb|ACN23696.1| ribosomal protein S3 [Halimeda tuna] gi|223928069|gb|ACN23698.1| ribosomal protein S3 [Halimeda tuna] Length = 165 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb01] gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb01] Length = 270 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|223928042|gb|ACN23680.1| ribosomal protein S3 [Halimeda tuna] Length = 165 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSXWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIKISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|288191148|gb|ADC43927.1| ribosomal protein S3 [Hura crepitans] Length = 490 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 315 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++ Sbjct: 374 NTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 434 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 484 >gi|56181009|gb|AAV83618.1| ribosomal protein S3 [Halimeda lacunalis] gi|56181012|gb|AAV83620.1| ribosomal protein S3 [Halimeda lacunalis] gi|223928009|gb|ACN23658.1| ribosomal protein S3 [Halimeda lacunalis] Length = 168 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109 + I++++ +P ++IGKK I + + K I + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168 >gi|56181344|gb|AAV83766.1| ribosomal protein S3 [Halimeda monile] Length = 263 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + +++ + +P ++IGKKG +++ +K++ + Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98 >gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102] Length = 255 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + + ++G++G Sbjct: 14 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRR 66 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 67 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 127 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGI 185 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 186 KVKIMRGSDPDGKAGPSKSLPD 207 >gi|302749053|gb|ADL64006.1| ribosomal protein S3 [Stegnosperma halimifolium] Length = 481 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 308 KVMKLIEKFIDLGGIEEL---IKGIEMMIEIILKKRRIPYGYNSYLNEVKKMRSLLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++ Sbjct: 365 ATNTLIESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFSKIVKDIPLVMKRGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S Sbjct: 425 CCSGRLEGAEIARTECGKYGKTSCNVLDHKIDYASAEVSTRYGILGVKVWISY 477 >gi|302748707|gb|ADL63834.1| ribosomal protein S3 [Dioscorea sp. Qiu 94044] Length = 477 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ +II+ + R +++K+R LSN T + Sbjct: 309 KVMEFIEKFIDLGGIGEL-IKGIEMMIKIILRNRRIPYGYNSYFNEVQKMRSFLSNRTKT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 427 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 428 SGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 477 >gi|288191211|gb|ADC43958.1| ribosomal protein S3 [Sauvagesia erecta] Length = 453 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ LK G+ ++ I+ II+ R +++K+R LSN TN+ Sbjct: 281 KVMELIEKFLKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEMKKMRSLLSNRTNT 339 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 340 TTLIESVKIQSVYQSASPLAQDISFQLRNKKKSFRSIFSKIVKDIPLVMKKGVEGIRISC 399 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY TA T YG GIKV++S Sbjct: 400 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 450 >gi|153805619|ref|YP_001382203.1| ribosomal protein S3 [Leptosira terrestris] gi|134270150|gb|ABO69339.1| ribosomal protein S3 [Leptosira terrestris] Length = 325 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 38/190 (20%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+G+ S WF+ +Y + ED IR + A +++I I+RT Sbjct: 1 MGQKVHPLGFRVGITKKHRSLWFSNSKQYPQSVLEDYVIRNNILKTFPSAEISEIHIQRT 60 Query: 61 -------HKNCRIIVYSARPGLIIGKKGTDIEKIRK------------------------ 89 II+YS +P ++G K + K+RK Sbjct: 61 HHDIESSPNGLIIIIYSKKPNQLVGNKHEKLHKLRKILKQKLTLNRSLIKPKGQVFLNSS 120 Query: 90 -------KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 L I V E+ P +A I +I QQL+ R +R +K+ + Sbjct: 121 WRDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIKKVIAEVK 180 Query: 143 RFGADGVKVI 152 + + +K I Sbjct: 181 KERKENLKTI 190 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%) Query: 19 NSRWFARGSEYGALLHEDLK-------IREYLQCHLKQAGVAKILIERTHKNCRIIVYSA 71 NS W ++ +L + K +RE + A I + ++ + Sbjct: 118 NSSW----RDFSKILLQKQKTDRIKFLVRE-ITTPYSSAFCIGNAIVQQLQDRQ------ 166 Query: 72 RPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130 R +I K +++K RK+ + + + + P + + LE + Sbjct: 167 RYRFVIKKVIAEVKKERKENLKTIQPTNTNKVITSREIPTMEFPAALEKAQNPLEYNL-- 224 Query: 131 RRAMKRAVQ--SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 A ++ Q S+ + G+K+ +GRLNGAE++RTE + +GRVPL TL+A IDY Sbjct: 225 -SAFNQSKQDKSSYQVPIKGLKIQLAGRLNGAEIARTEWFRKGRVPLHTLKADIDYSYQK 283 Query: 189 AETAYGSCGIKVYVSLR 205 A T YG G+KV+V Sbjct: 284 AYTKYGIIGVKVWVFNG 300 >gi|302749031|gb|ADL63995.1| ribosomal protein S3 [Simmondsia chinensis] Length = 483 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 310 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTKT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSCNLFNQKIDYASAEVSTRYGILGVKVWISY 479 >gi|223927407|gb|ACN23327.1| ribosomal protein S3 [Halimeda velasquezii] Length = 198 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 47/201 (23%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDNFLRTILPKKYNKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM------------------------- 94 + I++ + +P ++IGKKG ++E +K++ N+ Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKNLLSSTDRSKALPHKHLHLQSSNLGKS 120 Query: 95 ------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQ 139 ++ L V NA+ IA + + LE+RV ++ K+ +Q Sbjct: 121 RALKQQPPLPEPNKLKVILYVIRCKN---NASSIADFLIENLEKRVPYKLVFVLLKKHLQ 177 Query: 140 S---AMRFGADGVKVIASGRL 157 G+K+ SGRL Sbjct: 178 KQHQKQSAIGQGMKIQISGRL 198 >gi|288191205|gb|ADC43955.1| ribosomal protein S3 [Lophira lanceolata] Length = 453 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ +K G+ ++ I + + + G +++K+R LSN T Sbjct: 281 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 337 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 338 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 397 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY TA T YG GIKV++S Sbjct: 398 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 450 >gi|77556439|gb|ABA99235.1| Mitochondrial ribosomal protein S3, putative, expressed [Oryza sativa Japonica Group] Length = 748 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 369 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 425 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 426 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 485 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 486 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 538 >gi|130076586|gb|ABO31951.1| ribosomal protein S3 [Penthorum sedoides] Length = 508 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496 >gi|302748525|gb|ADL63743.1| ribosomal protein S3 [Albizia julibrissin] Length = 494 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 11/174 (6%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + + + I + + G +++K+R LSN T Sbjct: 320 KVMELIDKLIDLGRIGE---WIKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRT 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150 N+ + ++ +A+ IAQ I+ QL + R +F R +K + M+ G +G++ Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD-IPLVMKKGVEGIR 435 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + SGR GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 436 ICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISY 489 >gi|130076588|gb|ABO31952.1| ribosomal protein S3 [Peridiscus lucidus] Length = 411 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++K+R LSN T Sbjct: 232 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 288 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150 N + ++ +A+ IAQ I+ Q R +F + +K + M+ G +G++ Sbjct: 289 NXNTLIESVKIKSVYQSASPIAQDISFQPRNXTRSFRSIFSKIVKD-IPLVMKKGVEGIR 347 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 + SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 348 ICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGG 407 Query: 211 S 211 Sbjct: 408 R 408 >gi|302749061|gb|ADL64010.1| ribosomal protein S3 [Strelitzia reginae] Length = 481 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 312 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 368 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 369 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 428 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481 >gi|223927410|gb|ACN23329.1| ribosomal protein S3 [Halimeda minima] Length = 199 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG K+ I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKMKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 + I++ + +P ++IGKKG ++E +K++ + Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95 >gi|302748529|gb|ADL63745.1| ribosomal protein S3 [Allium cepa] Length = 370 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + +I + I + + + G +++K+R LSN T Sbjct: 190 KVMELIEKFID---PGRIGLLIKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 246 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + + + M G +G+++ Sbjct: 247 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSIIVKDIPLIMPKGVEGIRI 306 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G IDY A T YG G+KV +S Sbjct: 307 CCSGRLGGAEIARTECGKYGETSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 359 >gi|262186719|ref|YP_003275978.1| ribosomal protein S3 [Pleurozia purpurea] gi|237780716|gb|ACR19362.1| ribosomal protein S3 [Pleurozia purpurea] Length = 428 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 284 RYYYLKKMQSLFSNRTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 343 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 344 QIKKCSYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 403 Query: 199 KVYVSL 204 KV+VS Sbjct: 404 KVWVSY 409 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M QK+NPI RL +N + +S WF+ YG LL++DL R+Y + + + Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSDYY-YGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104 +I K I V+ +G K + + ++ + Sbjct: 60 CIIHHFPKRTFIHVFFLDRLSQSRHQGLGAIPSVKLIGRINDNTVKQRNE 109 >gi|543683|pir||S40458 ribosomal protein S3 - Chlamydomonas peterfii chloroplast (fragment) Length = 807 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 1/149 (0%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113 KI T N ++ + + + + L+ I + A Sbjct: 659 KIEKVLTKSNQKVDFDKNLQDAFLDQVENQRKMYKANLALTPKISIQFFSVKQDNLFEKA 718 Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGR 172 +++A S+ LE+ FR +K+A + MR GVK+ +GRLNGAE++R+E GR Sbjct: 719 SVVADSVVDALEKCKAFRGVIKKAKEDLMRRSRVKGVKIQVAGRLNGAEIARSEWVRAGR 778 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 VPLQTLRA+IDY A T YG G+KV+ Sbjct: 779 VPLQTLRANIDYSYRTASTIYGIIGVKVW 807 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA Y + ED +R+ L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFNKYAYAQSVVEDFMLRKTLMKMFPD 51 >gi|223928006|gb|ACN23656.1| ribosomal protein S3 [Halimeda lacunalis] Length = 168 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQIXRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109 + I++++ +P ++IGKK I + + K I + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168 >gi|302749085|gb|ADL64022.1| ribosomal protein S3 [Tetramerista sp. Coode 7925] Length = 485 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 306 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 363 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN + + ++ +A+ IAQ I+ Q ++ FR + V++ M+ G Sbjct: 364 LSNRAKTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKNIKLVMKKGV 423 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 424 EGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 481 >gi|56181042|gb|AAV83640.1| ribosomal protein S3 [Halimeda tuna] Length = 175 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 20/175 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI-ER 59 MGQK++P+ FR+G+ S+W+A Y + ED IR L K+A +KI I + Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKKYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-------NSEIHLSVNEVPKPEIN 112 T + I++++ G++IG K ++ +K++ + V + + + + Sbjct: 61 TANHFEIVIHAQNLGILIGTKSEKLKLFQKQIKEFIFHYRQSEWNSKLKVVLHIFRCKTS 120 Query: 113 ATLIAQSIAQQLERRVVFRRAMK---RAVQSAMRF---------GADGVKVIASG 155 A+ IA I + LERRV ++ A + +Q R G G+K+ SG Sbjct: 121 ASSIADFIEEHLERRVPYKVAFNLLQKHLQRQERQEHFIXDSALGILGMKIQISG 175 >gi|288191241|gb|ADC43973.1| ribosomal protein S3 [Abatia parviflora] Length = 492 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 6/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E L+ G LI+ II+ R +++K+R Sbjct: 310 DLLGKD-KVME-LREKFINLGGIGELIKGIEMMIEIILRKRRIPYRDNSYLNEMKKMRSL 367 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGA 146 LSN T + + ++ +A+LIAQ I+ QL +R FR + ++ M Sbjct: 368 LSNRTATNTLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIEFLMNKWV 427 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 428 EGIRICCSGRLKGAEIARTECSKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 485 >gi|302748776|gb|ADL63868.1| ribosomal protein S3 [Hedycarya arborea] Length = 483 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ ++R +++K+R LSN TN+ Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEVKKMRSLLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIQLVMPKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483 >gi|56181015|gb|AAV83622.1| ribosomal protein S3 [Halimeda lacunalis] gi|56181018|gb|AAV83624.1| ribosomal protein S3 [Halimeda lacunalis] Length = 168 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109 +N I++++ +P ++IGKK I + + K I + + + Sbjct: 61 IENHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 + +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168 >gi|302748673|gb|ADL63817.1| ribosomal protein S3 [Croomia pauciflora] Length = 456 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LS TN+ Sbjct: 288 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSFLSERTNT 346 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 347 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 406 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 407 SGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWIS 456 >gi|288191265|gb|ADC43985.1| ribosomal protein S3 [Eucryphia milliganii] Length = 512 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 6/172 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + GV ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 336 KVMELIDKFINLGGVGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 394 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+ IAQ I+ QL R +F + +K + G +G+++ Sbjct: 395 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKEGLEGIRIC 454 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 455 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506 >gi|272716746|gb|ACZ95675.1| ribosomal protein S3 [Abies holophylla] Length = 557 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 7/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL ++ IR L L G L+ II+ + R ++ K+R Sbjct: 382 NLLGKEKVIR--LVEKLISLGGIGGLMRGIGMMIEIILRNRRIPYGYNYYLNEVRKMRSL 439 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+LIAQ I+ QL R FR + V+ M G Sbjct: 440 LSNRTNTNTLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSQIVRDIPLVMPKGV 498 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G+++ SGRL GAE++RTEC G+ R IDY +A T YG G+KV++S Sbjct: 499 RGIRICCSGRLKGAEIARTECREYGKTSCNAFRHKIDYASAKVSTRYGILGVKVWISF 556 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I + K I ++ Sbjct: 60 CIIHHSPKRTFIHLF 74 >gi|302748913|gb|ADL63936.1| ribosomal protein S3 [Ochna serrulata] Length = 448 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ +K G+ ++ I + + + G +++K+R LSN T Sbjct: 276 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 332 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 333 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 392 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY TA T YG GIKV++S Sbjct: 393 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 445 >gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR] Length = 271 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|302748993|gb|ADL63976.1| ribosomal protein S3 [Rhabdodendron amazonicum] Length = 475 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 5/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ R +++K+R LSN T + Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKKRRIPYGYNSYLNEVKKMRSLLSNRTKT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ R FR + + + M+ G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIYSQIVKDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 SGR GAE++RTEC + IDY +A T YG G+KV++ Sbjct: 426 SGRSEGAEIARTECGKYRKTSCNVFDQKIDYASAEVSTRYGILGVKVWI 474 >gi|288191281|gb|ADC43993.1| ribosomal protein S3 [Tripterygium regelii] Length = 501 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + +++K+R LSN T + Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRTKT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMTKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|328541200|gb|AEB21824.1| ribosomal protein S3 [Kurzia calcarata] Length = 375 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|272716751|gb|ACZ95678.1| ribosomal protein S3 [Picea smithiana] Length = 569 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 422 GMIIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 480 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 481 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 540 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++S Sbjct: 541 VFRHKIDYASAKVSTRYGILGVKVWISF 568 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKK 80 +I K I ++ R + K Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKYK 85 >gi|224365643|ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209954167|emb|CAQ77614.1| ribosomal protein S3 [Vitis vinifera] gi|239764764|gb|ACS15233.1| ribosomal protein S3 [Vitis vinifera] Length = 563 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 379 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 498 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 548 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P G K + + K+ Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRGLKRREKSRPGKEKGRWW 98 >gi|288191283|gb|ADC43994.1| ribosomal protein S3 [Lepidobotrys staudtii] Length = 284 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 109 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 167 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 168 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSNIVKDIPLVMKKGVEGIRICC 227 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 228 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 278 >gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5] gi|17367830|sp|Q9V1U1|RS3_PYRAB RecName: Full=30S ribosomal protein S3P gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5] Length = 210 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + D + Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + VE++ Sbjct: 193 IEI---IEKPVEEE 203 >gi|302748937|gb|ADL63948.1| ribosomal protein S3 [Pennantia corymbosa] Length = 483 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K++ LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMQSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|288191203|gb|ADC43954.1| ribosomal protein S3 [Elvasia calophyllea] Length = 450 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ +K G+ ++ I + + + G +++K+R LSN T Sbjct: 278 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 334 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 335 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 394 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY TA T YG GIKV++S Sbjct: 395 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 447 >gi|130076592|gb|ABO31954.1| ribosomal protein S3 [Ribes sp. Qiu 95022] Length = 321 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 145 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 203 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGAD---GVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ G+++ Sbjct: 204 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKEVEGIRICC 263 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 264 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 314 >gi|302749105|gb|ADL64032.1| ribosomal protein S3 [Tropaeolum peltophorum] Length = 490 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 45 CHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLS 102 ++ + +I I + + G +++K+R LSN N+ + Sbjct: 312 KVMEDKLINRIEELIKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRKNTNTLIE 371 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIASGRLN 158 ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ SGRL Sbjct: 372 SVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICCSGRLE 431 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 432 GAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 484 >gi|288191213|gb|ADC43959.1| ribosomal protein S3 [Panda oleosa] Length = 498 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 5/169 (2%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 328 MELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 386 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG Sbjct: 387 LIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 446 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 447 RSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66] gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66] Length = 221 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 10/194 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G A + + T II+ + R ++G KG I ++ + N Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVLGVKGRRIRELTSLVQKRFNFPAG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 A+ +++ + +G + Q R ++D G G++V + L +V S Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQGVLGVQVKIMLPYDPEGKVGPS 202 Query: 212 DSTIPAAEHRVVEK 225 + A R ++ Sbjct: 203 NPLPDAIMVREPKE 216 >gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14] gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14] Length = 246 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E LQ L G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLGEKGQR 65 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + N + L + + + A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGR-VPLQTLRAH-IDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + EG V R +D G G+ Sbjct: 126 VMEAGAKGCEVIVSGKLR-AQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGV 184 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + D T R ++ Sbjct: 185 KVSIM-----LPHDPTGKQGPKRNLD 205 >gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3P [Metallosphaera sedula DSM 5348] gi|172046893|sp|A4YCX2|RS3_METS5 RecName: Full=30S ribosomal protein S3P gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348] Length = 240 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 4/172 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 + + E+L A A I +T R+ +Y+ RP +IIGK G I+++ + L N Sbjct: 16 VMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIKRLAQILEKYFN 75 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++V + KPE+NA ++A +A LE+ FRRA ++ M GA G +VI SG Sbjct: 76 LENPQITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIMNAGALGAEVIVSG 135 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++ +E ++ E EG V L +D A+A G G++V ++ Sbjct: 136 KIT-SERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVVITKP 186 >gi|272716711|gb|ACZ95657.1| ribosomal protein S3 [Tsuga dumosa] Length = 558 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G +++K+R L N TN+ + ++ +A+LIAQ I Sbjct: 411 GMMIEILLRNRRIPYGYNYYLNEVQKMRSLLFNRTNTNTLIGSVKILN-YQSASLIAQDI 469 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 470 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 529 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++S Sbjct: 530 VFRHKIDYASAKVSTRYGILGVKVWISF 557 Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRNTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|302748691|gb|ADL63826.1| ribosomal protein S3 [Datisca cannabina] Length = 499 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVIEWIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 494 >gi|296423595|ref|XP_002841339.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum] Length = 360 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T II+ + ++G++G Sbjct: 96 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 148 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A +S+ +L + RRA ++ Sbjct: 149 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLRF 208 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q R ID T G GI Sbjct: 209 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQGVLGI 267 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 268 KVKIMRGSDPDGKSGPQKSLPD 289 >gi|302748519|gb|ADL63740.1| ribosomal protein S3 [Aextoxicon punctatum] Length = 489 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + G+ G +++K+R LSN T Sbjct: 308 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477 >gi|223928063|gb|ACN23694.1| ribosomal protein S3 [Halimeda tuna] Length = 165 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++ + +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIXAQQPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVIFVLLKKHLQR-QKHSALGMKVQIAG 165 >gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans JEC21] gi|134106179|ref|XP_778100.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var. neoformans B-3501A] gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276] gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var. neoformans B-3501A] gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var. neoformans JEC21] gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276] Length = 252 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 6/185 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 ++ L + G A + TH II+ + ++G KG I +++ +K + Sbjct: 25 DFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGRRIRELKALIEKRFKFPEN 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++AT A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 ALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLRFVMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A +++ + EG + Q R IDY G GIKV + + + Sbjct: 145 RAA-RAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQGVLGIKVKIMKPSDPAGRQGPA 203 Query: 216 PAAEH 220 Sbjct: 204 KNLPD 208 >gi|56180907|gb|AAV83550.1| ribosomal protein S3 [Halimeda cuneata] Length = 160 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ + S W+A +Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLVRTLLFKKYNRAKFDKITIFRN 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA----TL 115 + I +Y+ +P +++G G + + K S + + + + + + Sbjct: 61 IEDHIEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSKLKVILSIFCCKINASSA 120 Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 IA I + LERR+ ++ + + R G+KV SG Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160 >gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP] gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP] Length = 207 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EYL+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER V FRRA A+++ MR GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRLSGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + + + Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPEARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + +E++ Sbjct: 193 IEI---IEKPLEEE 203 >gi|302748848|gb|ADL63904.1| ribosomal protein S3 [Linnaea borealis] Length = 485 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 311 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480 >gi|223927416|gb|ACN23333.1| ribosomal protein S3 [Halimeda minima] Length = 155 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATL- 115 + I++ + +P ++IGKKG ++E +K++ + TN KP+ L Sbjct: 61 IEGHIEIVINAQKPEILIGKKGENLEAFQKEIKKLLSTTNRASDSECEATAKPQNKVILY 120 Query: 116 ----------IAQSIAQQLERRVVFRRAM 134 IA + + LE+RV ++ Sbjct: 121 VIRCKNNASSIADFLIENLEKRVPYKHVF 149 >gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|330936377|ref|XP_003305367.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1] gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1] Length = 266 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKAGPSKSLPD 209 >gi|130076590|gb|ABO31953.1| ribosomal protein S3 [Rhodoleia championii] Length = 480 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 305 KVIELIDKFINPGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 363 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V++ M+ G G+++ Sbjct: 364 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKNIPLVMKKGVGGIRICC 423 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 424 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 474 >gi|302748575|gb|ADL63768.1| ribosomal protein S3 [Begonia sp. Qiu 05009] Length = 518 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + G+ G +++K+R LSN T Sbjct: 345 KVIELIEKFIDLGGIGDLFKGI---EMMIEIILKNRGIPYGYNSYLNEVQKMRSLLSNKT 401 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 402 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSQIVKDIPLVMKKGVEGIRI 461 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 462 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 514 >gi|288191279|gb|ADC43992.1| ribosomal protein S3 [Siphonodon celastrineus] Length = 506 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 6/172 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + +++K+R L N T + Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKIKIPYGYNFYLNEVKKMRSLLYNRTKT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM----RFGADGVKVI 152 + ++ +A+ IAQ I+ QL + FR + V+ + G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTREFRSIFSQIVKDIPLVMKKKGVEGIRIC 448 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 500 >gi|170095049|ref|XP_001878745.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82] Length = 262 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+ L + G + + TH II+ + ++G+KG I ++ +K + Sbjct: 23 EFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A +++ + +G + Q R +DY G GIKV + Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKVKIMKG 191 >gi|272716717|gb|ACZ95660.1| ribosomal protein S3 [Keteleeria fortunei] Length = 556 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 409 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 467 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 468 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 527 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++S Sbjct: 528 VFRHKIDYASAKVSTRYGILGVKVWISF 555 Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|417728|sp|Q04716|RT03_PETHY RecName: Full=Ribosomal protein S3, mitochondrial gi|14163|emb|CAA47420.1| S3 [Petunia x hybrida] Length = 562 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I II+ + R +++K+R L N TN+ Sbjct: 378 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 436 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 437 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 496 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 497 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 547 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFS--YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 58 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 +I K R ++ P K + + K+ Sbjct: 59 CIILHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 96 >gi|302748840|gb|ADL63900.1| ribosomal protein S3 [Leea guineensis] Length = 481 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477 >gi|302748607|gb|ADL63784.1| ribosomal protein S3 [Calycanthus floridus] Length = 483 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q + FR + V+ M G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483 >gi|272716723|gb|ACZ95663.1| ribosomal protein S3 [Cathaya argyrophylla] Length = 557 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 410 GMMIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 468 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 469 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 528 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++S Sbjct: 529 VFRHKIDYASAKVSTRYGILGVKVWISF 556 Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLHLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|288191253|gb|ADC43979.1| ribosomal protein S3 [Tricliceras longipedunculatum] Length = 503 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 4/166 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L L+ G LI+ II+ + R ++ K+R LSN TN+ + Sbjct: 332 LIEKLRNLGRIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNTNTLIE 391 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ SGRL Sbjct: 392 SVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCSGRLE 451 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GAE++RTEC G+ L IDY A T YG G+KV++S Sbjct: 452 GAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYGILGVKVWISY 497 >gi|57013937|ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum] Length = 563 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I II+ + R +++K+R L N TN+ Sbjct: 379 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 437 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 548 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 9/100 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 +I K R ++ P K + + K+ Sbjct: 60 CIIIHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 97 >gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-] gi|6094179|sp|O60128|RS3_SCHPO RecName: Full=40S ribosomal protein S3 gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe] gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe] Length = 249 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 13/199 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + T II+ + ++G+KG Sbjct: 15 ADGVFYAEL-------NEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRR 67 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A +S+ +L + RRA ++ Sbjct: 68 IRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRY 127 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q ID T G G+ Sbjct: 128 VMEAGAKGCEVVISGKLRAA-RAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGV 186 Query: 199 KVYVSLRDEVSDSDSTIPA 217 KV + L + + ++P Sbjct: 187 KVKIMLPEPKTRQKKSLPD 205 >gi|302748653|gb|ADL63807.1| ribosomal protein S3 [Clavija eggersiana] Length = 476 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 303 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 359 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ ++ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 360 NTNTNIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 419 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 420 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 472 >gi|288191313|gb|ADC44009.1| ribosomal protein S3 [Daphniphyllum macropodum] Length = 497 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 322 KVIELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 381 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 441 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 491 >gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae ARSEF 23] Length = 257 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPDGKAGPSKSLPD 209 >gi|223927717|gb|ACN23466.1| ribosomal protein S3 [Halimeda cuneata] Length = 166 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FR+G+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRVGITQPXLSHWYASKKYYSKYVLEDHFVRTVLSEKYTRARFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111 + I++++ +P ++IGKKG +++ +K++ NS++ + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLKIFQKQIKTFIFQYRQIEWNSKLKVILYIYRCKTS 120 Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ IA I + LERR+ ++ + + G+K+ SG Sbjct: 121 ASSAIADFIVEHLERRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166 >gi|295154348|gb|ADF83083.1| ribosomal protein S3 [Tuctoria fragilis] Length = 128 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 67 IVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125 I++ P L+ K ++EK +K N N +++++ +V +P ++A+ IA QL+ Sbjct: 1 IIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPYREPNILAEYIAFQLK 60 Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA IDY Sbjct: 61 NRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRAKIDYC 120 Query: 186 TAVAETAY 193 T Y Sbjct: 121 CYPIRTIY 128 >gi|145932456|ref|YP_001165368.1| ribosomal protein S3 [Phytophthora ramorum] gi|110169654|gb|ABG54119.1| ribosomal protein S3 [Phytophthora ramorum] Length = 271 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 46/250 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60 Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVN 104 +T KN + VY + +I+ K ++ ++ Sbjct: 61 KTSKNINVYVYIQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLK 120 Query: 105 EVPK-----------------------PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ N +I I Q LER+ ++ + + + Sbjct: 121 QIFDKIKKNNKINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179 Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 ++ G ++ GRLN ++ + + +G++PL TL I Y +T G Sbjct: 180 LQEFFKMFSNFIGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239 Query: 196 CGIKVYVSLR 205 C IK++ + Sbjct: 240 CSIKLWFFFK 249 >gi|305662597|ref|YP_003858885.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230] gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230] Length = 209 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 6/188 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 EYL +AG A + + RT R+I+Y+ARPGLIIG++G + I+ + + Sbjct: 20 EYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQTLRTIQLVIEKLFGIENP 79 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 ++V E P++NA ++A +IA LER + FRRA A++ M GA G +++ SG+L Sbjct: 80 QITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALRRVMAAGAIGCEIVISGKLV- 138 Query: 160 AELSRTECYLEGRVPL---QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 AE +R E G+V Q+ R +D A G GI+V ++ +D + Sbjct: 139 AERARYEKLKMGKVYKSGEQSFRL-VDRAVAHVLLKPGMYGIEVLITRPGLTADHVEIVQ 197 Query: 217 AAEHRVVE 224 + + Sbjct: 198 KEQEVSQQ 205 >gi|272716505|gb|ACZ95529.1| ribosomal protein S3 [Nageia formosensis] Length = 616 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 13/196 (6%) Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQAGVAKILIE-------RTHKNCRIIVYSARP 73 W ++ LL +I R++ ++ + + I + + Sbjct: 420 WRSKKKILTYLLRRSKEILRKHFHTYIHKGSGSVKKIILGRIGGVMRGIEMMLEIRLRGA 479 Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131 G+ +G +++K+R LS TN+ + ++ +A+ IAQ I+ +L R FR Sbjct: 480 GIPVGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISFRLRDRKSFR 539 Query: 132 RAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 R + M G+++ SGRL GAE++RTEC G+ R IDY +A Sbjct: 540 SIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASAK 599 Query: 189 AETAYGSCGIKVYVSL 204 T YG G+KV++S Sbjct: 600 VSTRYGILGVKVWISF 615 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 9/93 (9%) Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55 QK NPI RL +N + +S WF+ YG L+++D+ R+Y + + + + Sbjct: 40 QKGNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 98 Query: 56 LIERTHKNCRIIVYSA-RPGLIIGKKGTDIEKI 87 ++ + K+ I ++ RP L +G + Sbjct: 99 ILHHSPKSTFIHLFLPRRPPLNSNSRGGQHGRS 131 >gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3P [Thermococcus onnurineus NA1] gi|254764554|sp|B6YSL9|RS3_THEON RecName: Full=30S ribosomal protein S3P gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1] Length = 208 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ P +NA + A +AQ LER V FRRA A+++ MR GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + D + Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVSIMPPDAKLPDE 192 Query: 213 STI---PAAEHRVVEK 225 + P E V E+ Sbjct: 193 IEVIEKPIQEEEVSEE 208 >gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102] gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102] Length = 262 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + + E+ S Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQS 221 >gi|223927968|gb|ACN23631.1| ribosomal protein S3 [Halimeda discoidea] Length = 158 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 11/151 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151 >gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3P [Methanopyrus kandleri AV19] gi|27734506|sp|Q8TX35|RS3_METKA RecName: Full=30S ribosomal protein S3P gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19] Length = 227 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 5/180 (2%) Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEV 106 +AG + ++R +II Y RP + IG++G +I ++ +++ + + V E+ Sbjct: 34 RAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRRVEEEVQERFPLLGRVSIEVKEL 93 Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166 P PE+N ++A+ +A LER + FRRA A++ M GA G +I SG+L GA +RTE Sbjct: 94 PSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGA-RARTE 152 Query: 167 CYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 ++EG V + ++ G A T G+ G+ V + D + I E E Sbjct: 153 KFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIMPPDVELPDELEIRPPEEVEDE 212 >gi|328541244|gb|AEB21846.1| ribosomal protein S3 [Zoopsis leitgebiana] Length = 376 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|302748629|gb|ADL63795.1| ribosomal protein S3 [Ceanothus sp. Qiu 96098] Length = 509 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN Sbjct: 327 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRA 383 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKV 151 ++ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 HTNTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLIMKKGVEGIRI 443 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496 >gi|302749083|gb|ADL64021.1| ribosomal protein S3 [Tetracera asiatica] Length = 471 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 6/185 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D I E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 284 NLMDKDKVI-ELIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 341 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 342 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 401 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 402 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSK 461 Query: 207 EVSDS 211 + Sbjct: 462 KKGGR 466 >gi|302748755|gb|ADL63858.1| ribosomal protein S3 [Gelsemium sp. Qiu 95096] Length = 482 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 309 KVMELIEKFIDLGRIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKTNT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q + FR + V+ M+ G +GV++ Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGVRICC 427 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 428 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISY 478 >gi|302748733|gb|ADL63847.1| ribosomal protein S3 [Euonymus sp. Qiu 94190] Length = 507 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + + G +++K+R LSN T Sbjct: 325 KVMELIEKFINLGGIGEF---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 381 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 382 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 441 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501 >gi|288191315|gb|ADC44010.1| ribosomal protein S3 [Calycanthus floridus] Length = 501 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q + FR + V+ M G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 495 >gi|145932366|ref|YP_001165415.1| ribosomal protein S3 [Phytophthora sojae] gi|110169609|gb|ABG54075.1| ribosomal protein S3 [Phytophthora sojae] Length = 276 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 95/250 (38%), Gaps = 46/250 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58 MGQKI PI RL WNS+W EY LLH DL+I++Y + + K + + I Sbjct: 1 MGQKIIPISLRLDKKKNWNSKWIVNNDEYSNLLHFDLEIKKYFENIFNYKNLKLIDLNIV 60 Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------------------KGTD 83 +T N + VY + K + Sbjct: 61 KTSNNINVYVYIQKNSKKYYKLSYNKIINHLNLYFLNHNIKLFIKNVQFFEFIKLRRNLK 120 Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEI--NATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 + K +N N + + N +I I Q LER+ ++ + + + Sbjct: 121 KIFDKIKKNNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179 Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 ++ G ++ GRLN ++ + + +G++PL TL I Y +T G Sbjct: 180 LQEFFKMFSNFVGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239 Query: 196 CGIKVYVSLR 205 C IK++V + Sbjct: 240 CSIKLWVFFK 249 >gi|130076576|gb|ABO31946.1| ribosomal protein S3 [Itea virginica] Length = 507 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKLKNLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|302749115|gb|ADL64037.1| ribosomal protein S3 [Vitis sp. Qiu 94046] Length = 483 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|302748991|gb|ADL63975.1| ribosomal protein S3 [Reseda alba] Length = 517 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 345 KVMELIEKFINLGGIEEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 401 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL ++R FR + + + S M+ +G+++ Sbjct: 402 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKRRSFRSIYTKIVKRIPSVMKKRVEGIRI 461 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE+++T+ Y G+ IDY A T YG G+KV++S Sbjct: 462 CCSGRLKGAEIAKTDSYKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISF 514 >gi|288191305|gb|ADC44005.1| ribosomal protein S3 [Vitis aestivalis] Length = 501 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|302748766|gb|ADL63863.1| ribosomal protein S3 [Griselinia littoralis] Length = 481 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477 >gi|272716729|gb|ACZ95666.1| ribosomal protein S3 [Pinus monophylla] Length = 557 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 410 GMMIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 468 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL R FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 469 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 528 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R IDY +A T YG G+KV++S Sbjct: 529 VFRHKIDYASAKVSTRYGILGVKVWISF 556 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I ++ Sbjct: 60 CIIHHFPKRTFIHLF 74 >gi|302748919|gb|ADL63939.1| ribosomal protein S3 [Oncotheca balansae] Length = 482 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae] Length = 240 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 13 ADGVNYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 184 Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223 KV + + D+ + I E + Sbjct: 185 KVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 217 >gi|302748667|gb|ADL63814.1| ribosomal protein S3 [Cornus florida] Length = 476 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 7/170 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ R I + + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---RKSIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSAMR-FGADGVKVIA 153 N+ + ++ +A+ IAQ I+ Q ++R FR + + V+ G +G+++ Sbjct: 367 NTNTLIESVKIQSVYQSASPIAQDISFQPRKKRRSFRSILTQIVKDLKFVKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 427 SGRLKGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWIS 476 >gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans] Length = 264 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 13/187 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187 Query: 199 KVYVSLR 205 KV + Sbjct: 188 KVKIMRG 194 >gi|302748889|gb|ADL63924.1| ribosomal protein S3 [Myristica maingayi] Length = 483 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSQIVKDIQLVMPKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 433 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483 >gi|224107577|ref|XP_002333496.1| predicted protein [Populus trichocarpa] gi|222837065|gb|EEE75444.1| predicted protein [Populus trichocarpa] Length = 551 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 6/145 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G +++K+R LSN TN+ ++ ++ +A+LIAQ I+ Q Sbjct: 401 ISIILRNIRIPYGYNSYLNEMKKMRSLLSNRTNTNTLITSVKIQSVYQSASLIAQDISFQ 460 Query: 124 LE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L +R F + V+ M +G+++ SGRL GAE++ TEC G+ Sbjct: 461 LSNKRRSFSSIFSKIVKDLSLLMNKWVEGIRICCSGRLKGAEIAGTECGKYGKTSCNLFN 520 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 IDY A T YG G+KV++S Sbjct: 521 QKIDYAPAEVSTPYGISGVKVWISY 545 Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWF---ARGSEYGALLHEDLKIREYL-QCHLKQAGVAKIL 56 M +K NPI RL +N + +S F YG L+++++ +R Y + + + + Sbjct: 1 MARKGNPISVRLYLNRSSDSSRFITIDSIYYYGKLVYQNVNLRSYFGSPPTTKVSLGRCI 60 Query: 57 IERTHKNCRIIVYSARPG 74 I K R ++ P Sbjct: 61 ILHFSK--RTFIHFFLPH 76 >gi|11467119|ref|NP_054420.1| ribosomal protein S3 [Marchantia polymorpha] gi|585955|sp|P26865|RT03_MARPO RecName: Full=Ribosomal protein S3, mitochondrial gi|250821|gb|AAB22413.1| ribosomal protein S3 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 430 aa] gi|786204|gb|AAC09417.1| rps3 [Marchantia polymorpha] Length = 430 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 286 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYQSASLIAQEISWKLEQKKSFRQICRSIFK 345 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 346 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 405 Query: 199 KVYVSL 204 KV+VS Sbjct: 406 KVWVSY 411 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 11/136 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M QK+NPI RL +N + +S WF+ YG LL++DL R+Y + + + Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSDYY-YGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN----EVPKPE 110 +I K I V+ +G K + + ++ + + E Sbjct: 60 CIIHHFPKRTFIHVFFLDRLSQSRHQGLGAIPSVKLIRRINDNTVKQRNEVGIWPKKRYE 119 Query: 111 INATLIAQSIAQQLER 126 + L + QL R Sbjct: 120 YHDRLPSIQKIDQLLR 135 >gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4] gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4] Length = 246 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E LQ L G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQR 65 Query: 84 IE---KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I + +K N + + L V + + A+S+ +L + RRA V+ Sbjct: 66 IRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+VI SG+L A+ ++ + EG + + ++D G G+ Sbjct: 126 VMEAGAKGVQVIVSGKLR-AQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQGVLGV 184 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + D T R ++ Sbjct: 185 KVSIM-----LPHDPTGKQGPKRALD 205 >gi|56180916|gb|AAV83556.1| ribosomal protein S3 [Halimeda cuneata] gi|56180922|gb|AAV83560.1| ribosomal protein S3 [Halimeda cuneata] gi|56180925|gb|AAV83562.1| ribosomal protein S3 [Halimeda cuneata] gi|56180928|gb|AAV83564.1| ribosomal protein S3 [Halimeda cuneata] Length = 161 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 6/161 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116 + I++++ +P ++I + + NS++ + + + I Sbjct: 61 IEDHLEIVIHAQKPDILIKGENLQKQIKTFLFQYRQIEWNSKLKVILYIFQCKTSASAAI 120 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGA--DGVKVIASG 155 A I + LE+R+ ++ + + R G+K+ SG Sbjct: 121 ADFIVEHLEKRIPYKVVLNLLKKHLKRKKQSTLGMKIQISG 161 >gi|223928003|gb|ACN23654.1| ribosomal protein S3 [Halimeda lacunalis] Length = 168 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 25/174 (14%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 + I++++ +P ++IGKK ++ + +I + + E N+ L Sbjct: 61 IEDHLEIVIHAQKPDILIGKK-----IDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVIL 115 Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 I I + LE+RV ++ K+ +Q + A G+K++ SG Sbjct: 116 YIFRCKTSAFSIGDFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168 >gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818] Length = 234 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 14/199 (7%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT--NSE 98 E+LQ L + G A + + +T II+ + R ++G+KG I ++ + Sbjct: 24 EFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKGRRIRELTGLVKKRFGFKDN 83 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L +V + A +S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 84 VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVLRLVMESGAKGCEVIISGKLR 143 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL---------RDE 207 A+ +++ + +G + R +ID G GIKV + Sbjct: 144 -AQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQGVLGIKVKIMRPYDPTGRNGPST 202 Query: 208 VSDSDSTIPAAEHRVVEKD 226 V I + V + Sbjct: 203 VLPDTLEIREPKEEDVPEK 221 >gi|302748631|gb|ADL63796.1| ribosomal protein S3 [Celosia cristata] Length = 472 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 5/168 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ S R +++K+R LSN TN+ Sbjct: 306 KVMKLIEKLIDLGGI-RELIKGIEMMIEIILKSRRIPYRYNSYLNEVKKMRSLLSNRTNT 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ + ++ R FR + V+ M+ G +GV++ Sbjct: 365 NTLIKSVKIKSVYQSASPIAQDISLKPKKKRRSFRSIFSQIVKKIPLVMKKGVEGVRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 SGRL GAE++RTEC G+ LR +DY +A T YG G+KV+ Sbjct: 425 SGRLGGAEIARTECGKYGKTSCNVLRQKMDYASAEVSTRYGIIGVKVW 472 >gi|302748830|gb|ADL63895.1| ribosomal protein S3 [Kadsura japonica] gi|302749023|gb|ADL63991.1| ribosomal protein S3 [Schisandra sphenanthera] Length = 481 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMEFIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 372 NTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPNGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 432 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 481 >gi|81176521|ref|YP_398405.1| rps3 [Triticum aestivum] gi|169649058|gb|ACA62619.1| rps3 [Triticum aestivum] Length = 537 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 353 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 409 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 410 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 469 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 470 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 522 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 +I K I + + +K + Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKKSR 88 >gi|302748523|gb|ADL63742.1| ribosomal protein S3 [Ailanthus altissima] Length = 489 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 5/168 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 SGRL GAE++RTEC G+ IDY A T YG G+KV+ Sbjct: 442 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVW 489 >gi|302749097|gb|ADL64028.1| ribosomal protein S3 [Trillium sp. Qiu 95016] Length = 481 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + + G +++K+R LSN T Sbjct: 312 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 368 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q +++ FR + V+ M G +G+++ Sbjct: 369 NTNTLMESVKIKSVYQSASLIAQDISFQPRNKKISFRSIFSKIVKDIPFIMPKGVEGIRI 428 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 CCSGRSGGAEIARTECGKYGKTSRNVFHHKIDYAPAEVSTRYGISGVKVRISY 481 >gi|302748949|gb|ADL63954.1| ribosomal protein S3 [Philydrum lanuginosum] Length = 476 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ ++ R I + + + G +++K+R LSN T Sbjct: 308 KVMEFIEKFIDLGGIEEL---RKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQRSFRSIFSKIVKDIPFIMPKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|71057452|emb|CAJ18175.1| ribosomal protein S3 [Halimeda hummii] Length = 165 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ + ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKLDILIGKKSENLEIFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFGLLKKHLQR-QKHSALGMKVQIAG 165 >gi|328541290|gb|AEB21869.1| ribosomal protein S3 [Mastigobryum limbatum] Length = 374 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368 Query: 199 KVYVSL 204 KV+VS Sbjct: 369 KVWVSY 374 >gi|302748810|gb|ADL63885.1| ribosomal protein S3 [Idiospermum australiense] Length = 478 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+LIAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTNIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|328541286|gb|AEB21867.1| ribosomal protein S3 [Mastigobryum lenormandii] Length = 376 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|328541284|gb|AEB21866.1| ribosomal protein S3 [Bazzania involuta] Length = 376 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704] gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704] Length = 263 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|302748929|gb|ADL63944.1| ribosomal protein S3 [Paracryphia alticola] Length = 501 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 320 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTKT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++ Sbjct: 379 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S ++ Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKIKGR 496 >gi|114151587|ref|YP_740368.1| ribosomal protein S3 [Zea perennis] gi|102567921|gb|ABF70838.1| ribosomal protein S3 [Zea perennis] Length = 559 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544 Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|302748877|gb|ADL63918.1| ribosomal protein S3 [Menyanthes trifoliata] Length = 492 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T + Sbjct: 320 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNFYLNEVKKMRSLLSNRTKT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++ Sbjct: 379 NTLIESVKIKSVYQSASSIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 489 >gi|108773415|ref|YP_635934.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesii] gi|122244867|sp|Q2EEW0|RR3_HELSJ RecName: Full=Plastid 30S ribosomal protein S3 gi|87242990|gb|ABD33982.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesi] Length = 241 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 32/230 (13%) Query: 8 ILFRLGVNCTWNSRWFARGSE-------------------YGALLHEDLKIREYL---QC 45 I RLG N T W + + L+ D ++ +Y+ + Sbjct: 8 IGLRLGYNKTHKLIWSLSKNNPIFIQTNHFLEYIIKNDPFFCGLILIDFQLMQYIVVHKN 67 Query: 46 HLKQAGVAKILIERTHK-----NCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMT 95 L K + + + S + I ++ K L + Sbjct: 68 QLGNFSPLKNNLPNSINLFLKLKIATEIQSNFNSVFILEERLHFLFFKYLNKMKNLKMLN 127 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 N +I + + + P + I + Q L + + RRA+ + + ++ GA+GVK+ G Sbjct: 128 NLKIKVKIKFLNNPILEPQWIFYKLHQDLYKGINIRRALAKISSNVIKKGAEGVKIQIKG 187 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 R+NG + + +G++PLQ L + I+Y + +T YG G+K++V Sbjct: 188 RINGVDKATVIVEEKGKMPLQNLSSEINYYSRALKTVYGLLGVKIWVFKG 237 >gi|130076580|gb|ABO31948.1| ribosomal protein S3 [Liquidambar styraciflua] Length = 514 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + G +++K+R LSN T Sbjct: 333 KVMELIDKLIDLGGIGEL---IKGIEMLIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 389 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 390 NTNTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMEKGVEGIRI 449 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 450 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 509 >gi|115278555|ref|YP_762354.1| ribosomal protein S3 [Sorghum bicolor] gi|114309676|gb|ABI60893.1| ribosomal protein S3 [Sorghum bicolor] Length = 559 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRRGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + VQ M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVQDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544 Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K + + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRNKSRPGKDKGRWW 98 >gi|302748679|gb|ADL63820.1| ribosomal protein S3 [Cryptocarya meisneriana] Length = 478 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIQLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium dendrobatidis JAM81] Length = 240 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+LQ L + G A + + T I++ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLGEKGRR 65 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + N + + L +V ++A A+S+ +L + RRA V+ Sbjct: 66 IRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACYGVVRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ +++G + Q + +IDY G GI Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQGVLGI 184 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + + D + + + Sbjct: 185 KVKIMQ-----EWDPSGKTGPKKPLP 205 >gi|302748852|gb|ADL63906.1| ribosomal protein S3 [Lomandra obliqua] Length = 480 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G + ++ II+ + + +++K+R LSN TN Sbjct: 312 KVMELIEK-FIDLGSTREFLKGIEMMIEIILRNRKIAYGYNSYLNEVQKMRSFLSNRTNI 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + V+ M G +G+++ Sbjct: 371 NTLIESVKIKSVYQSASLIAQDISFQLRNNKISFRSIFSKIVKDIPLIMPKGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++ TEC G+ I Y +A T YG G+KV++S Sbjct: 431 SGRLGGAEIAGTECGKYGKTSCNVFYQKIYYASAEVSTRYGILGVKVWIS 480 >gi|288191235|gb|ADC43970.1| ribosomal protein S3 [Rhizanthes lowii] Length = 484 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I + + G +++K S TN+ Sbjct: 316 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRRIPYGY-NYYFNEMQKMRSLWTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV--VFRRAMKRAVQSAMRFGADGVKVIASG 155 + + ++ +A+ IAQ I+ QL + + + + M+ G +G+++ SG Sbjct: 372 KTLIESVKIQSFYQSASPIAQDISFQLRNKTSPYILSQIVKDLSLVMKKGVEGIRICCSG 431 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 RL GAE +RTEC G+ IDY A T YG G+KV++S Sbjct: 432 RLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480 >gi|328541280|gb|AEB21864.1| ribosomal protein S3 [Bazzania trilobata] Length = 374 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A+T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQADTPYGILGV 368 Query: 199 KVYVSL 204 KV+VS Sbjct: 369 KVWVSY 374 >gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51] gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51] Length = 260 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKSLP 208 >gi|302748705|gb|ADL63833.1| ribosomal protein S3 [Dioncophyllum tholloni] Length = 496 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+ Sbjct: 322 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 381 NTLIESVKIKSFYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 441 SGRLEGAEIARTECGKYGKTSRNVFYHKIDYASAEVSTRYGILGVKVWISY 491 >gi|302748909|gb|ADL63934.1| ribosomal protein S3 [Nymphaea sp. Qiu 91029] Length = 482 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 22/197 (11%) Query: 30 GALLHED----------LKIREYLQCHLKQAGVAKI----LIERTHKNCR--IIVYSARP 73 L ED +K+R + + K I K I + Sbjct: 286 SNNLIEDAREQLLGQLRIKLRNLMDKEKVMKLIEKFIDLGRIGELIKGIEMMIEIILRNR 345 Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-F 130 + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q + F Sbjct: 346 RIPYGYNSYLNEVQKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSF 405 Query: 131 RRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 R + V+ M G +G+++ SGR GAE++RTEC G+ IDY A Sbjct: 406 RSIFSQIVKDIPLVMPKGVEGIRISCSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPA 465 Query: 188 VAETAYGSCGIKVYVSL 204 T YG G+KV +S Sbjct: 466 EVSTRYGISGVKVRISY 482 >gi|114151619|ref|YP_740426.1| ribosomal protein S3 [Zea luxurians] gi|110287615|gb|ABG65661.1| ribosomal protein S3 [Zea luxurians] Length = 556 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 372 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 428 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 429 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 488 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 489 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 541 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 7/92 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 +I K I + R K +K Sbjct: 60 CIILHFPKRTFIHFFLPRRLKRRDKSRPGKDK 91 >gi|302749117|gb|ADL64038.1| ribosomal protein S3 [Vriesea splendens] Length = 472 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + + G +++K+R LSN T Sbjct: 304 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 360 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 361 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 420 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 421 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 472 >gi|302748645|gb|ADL63803.1| ribosomal protein S3 [Hirtella triandra] Length = 416 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 10/176 (5%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92 IR+ L+ AG K I + + K KK+ Sbjct: 230 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 287 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148 N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G Sbjct: 288 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 347 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 348 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 403 >gi|288191309|gb|ADC44007.1| ribosomal protein S3 [Peridiscus lucidus] Length = 282 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++K+R LSN T Sbjct: 107 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 163 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 164 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 223 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 224 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 276 >gi|81687782|dbj|BAE47670.2| rps3 [Triticum aestivum] Length = 561 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 377 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 433 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 434 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 493 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 494 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 546 Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K I + + +K + + Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKQDKKSRPVLQEKGWW 100 >gi|328541228|gb|AEB21838.1| ribosomal protein S3 [Herbertus sakurai] Length = 375 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|288191233|gb|ADC43969.1| ribosomal protein S3 [Rafflesia tuan-mudae] Length = 499 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + + I + + G +++K R LSN Sbjct: 329 KVMELIEKLINLGGIGE---WIKGIDMMIEILLRNSRIPYGYNSYLNEMQKRRSLLSNRQ 385 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVI 152 ++ + ++ +A+ IAQ I+ QL + +F + +K + M+ G +G+++ Sbjct: 386 KTQTLIESVKIQSVYQSASPIAQDISFQLRNKKSPYIFSQIVKD-LPLVMKKGVEGIRIC 444 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE +RTEC G+ IDY A T YG G+KV++S Sbjct: 445 CSGRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496 >gi|130076560|gb|ABO31938.1| ribosomal protein S3 [Altingia excelsa] Length = 514 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + G +++K+R LSN T Sbjct: 333 KVMELIDKLIDLGGIGEL---IKGIEMLIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 389 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 390 NTNTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMEKGVEGIRI 449 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 450 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 509 >gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5] gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5] Length = 187 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 4/176 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 + EYLQ L +A +T ++IVY+ PGL+IG+KG +I+ I + L Sbjct: 2 MLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGI 61 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EVP ++NA ++A +A+ L R V FRRA A+ M GA G +++ SG+ Sbjct: 62 ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGK 121 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 L ++ RTE + G VP + +D G G+KV + ++ D Sbjct: 122 LT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKPAKMPD 176 >gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502] gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis] Length = 221 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 7/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G A + + T II+ + R ++G KG I ++ + N Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVLGVKGRRIRELTSLIQKRFNFPEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214 A+ +++ + +G + Q R +D G G++V + L D + + Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQVKIMLPYDPEGKTGPS 202 Query: 215 IPAAEHRVVEK 225 P + +V + Sbjct: 203 KPLPDAVMVRE 213 >gi|302748816|gb|ADL63888.1| ribosomal protein S3 [Illicium floridanum] Length = 486 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 317 KVMEFIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 376 NTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPNGVEGIRICC 435 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 436 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 486 >gi|288191140|gb|ADC43923.1| ribosomal protein S3 [Aneulophus africanus] Length = 292 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + +++K+R LSN TN+ Sbjct: 117 KVMELIEKFINLGRIGEL-IKGIEMLIEIILRKIKIPYGYNSYLNEMKKMRSLLSNRTNT 175 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 176 NTLIKSVKIKSVYQSASPIAQDISFQLRNKKRAFRSIFSQIVKDIPLVMKKGVEGIRICC 235 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 236 SGRSGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIPGVKVWISY 286 >gi|302749013|gb|ADL63986.1| ribosomal protein S3 [Sargentodoxa cuneata] Length = 478 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY +A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478 >gi|288191297|gb|ADC44001.1| ribosomal protein S3 [Cucumis sativus] Length = 348 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 4/166 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L G LI+ II+ + R + +++K+R LSN T + + Sbjct: 177 LIEKFIDLGWIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIE 236 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158 ++ +A+ IAQ I+ QL ++ FR + + VQ M G +G+++ SGR Sbjct: 237 SVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQIVQDIPFVMNKGVEGIRICCSGRSE 296 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 297 GAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISY 342 >gi|25987146|gb|AAN75744.1|AF319170_1 ribosomal protein S3 [Helianthus annuus] Length = 560 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 376 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTKT 434 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++ Sbjct: 435 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 494 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 495 SGRSEGAEIARTECENYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVWISY 545 >gi|94502719|ref|YP_588265.1| ribosomal protein S3 [Zea mays subsp. mays] gi|94502720|ref|YP_588320.1| ribosomal protein S3 [Zea mays subsp. mays] gi|114151654|ref|YP_740401.1| ribosomal protein S3 [Zea mays subsp. parviglumis] gi|40795158|gb|AAR91202.1| ribosomal protein S3 [Zea mays] gi|40795159|gb|AAR91203.1| ribosomal protein S3 [Zea mays] gi|93116110|gb|ABE98742.1| ribosomal protein S3 [Zea mays subsp. mays] gi|93116153|gb|ABE98784.1| ribosomal protein S3 [Zea mays subsp. mays] gi|102567987|gb|ABF70871.1| ribosomal protein S3 [Zea mays subsp. parviglumis] gi|102579656|gb|ABF70936.1| ribosomal protein S3 [Zea mays subsp. mays] Length = 559 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544 Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|134045|sp|P27928|RT03_MAIZE RecName: Full=Ribosomal protein S3, mitochondrial gi|13921|emb|CAA40690.1| mitochondrial S3-like ribosomal protein [Zea mays] Length = 559 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544 Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1] gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1] Length = 267 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210 >gi|328541184|gb|AEB21816.1| ribosomal protein S3 [Telaranea maorensis] Length = 375 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%) Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + + Sbjct: 254 LKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFKQIKK 313 Query: 144 F-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 G+++ SGRLNGAE+++TE G L IDY A T YG G+KV+V Sbjct: 314 CPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDRIDYAKTQASTPYGILGVKVWV 373 Query: 203 SL 204 S Sbjct: 374 SY 375 >gi|302748669|gb|ADL63815.1| ribosomal protein S3 [Corokia cotoneaster] Length = 484 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 311 KVMELIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTKT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIRLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 430 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480 >gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa II] gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa II] gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum] Length = 221 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 7/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G A + + T II+ + R ++G KG I ++ + N Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVLGVKGRRIRELTSLIQKRFNFPEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214 A+ +++ + +G + Q R +D G G++V + L D + + Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQVKIMLPYDPEGKTGPS 202 Query: 215 IPAAEHRVVEK 225 P + +V + Sbjct: 203 KPLPDAVMVRE 213 >gi|328541276|gb|AEB21862.1| ribosomal protein S3 [Bazzania nitida] Length = 375 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302749043|gb|ADL64001.1| ribosomal protein S3 [Sphenostemon lobosporus] Length = 497 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRPLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 492 >gi|328541288|gb|AEB21868.1| ribosomal protein S3 [Bazzania yoshinagana] Length = 375 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302749019|gb|ADL63989.1| ribosomal protein S3 [Saururus cernuus] Length = 483 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + +++KIR LSN TN+ Sbjct: 315 KVMELINKLIDLGGIGEL-IKGIEMMMEIILKNRSIPYGYNSYLNEVQKIRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 374 NTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC + IDY A T YG G+KV++S Sbjct: 434 SGRSKGAEIARTECGKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 483 >gi|328541230|gb|AEB21839.1| ribosomal protein S3 [Mastigophora woodsii] Length = 375 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541226|gb|AEB21837.1| ribosomal protein S3 [Lepicolea attenuata] Length = 375 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|152060913|sp|A1RXG6|RS3_THEPD RecName: Full=30S ribosomal protein S3P Length = 202 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 4/176 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 + EYLQ L +A +T ++IVY+ PGL+IG+KG +I+ I + L Sbjct: 17 MLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGI 76 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + V EVP ++NA ++A +A+ L R V FRRA A+ M GA G +++ SG+ Sbjct: 77 ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGK 136 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 L ++ RTE + G VP + +D G G+KV + ++ D Sbjct: 137 LT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKPAKMPD 191 >gi|328541248|gb|AEB21848.1| ribosomal protein S3 [Zoopsis liukiuensis] gi|328541250|gb|AEB21849.1| ribosomal protein S3 [Zoopsis setulosa] Length = 375 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYRKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+V Sbjct: 370 KVWVXY 375 >gi|93116066|gb|ABE98699.1| ribosomal protein S3 [Zea mays subsp. mays] Length = 559 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544 Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|328541278|gb|AEB21863.1| ribosomal protein S3 [Bazzania affinis] Length = 374 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 368 Query: 199 KVYVSL 204 KV+VS Sbjct: 369 KVWVSY 374 >gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15] gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15] Length = 266 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 188 KVKIMRGSDPEGKAGPSKTLPD 209 >gi|112253914|ref|YP_717168.1| ribosomal protein S3 [Brassica napus] gi|37591116|dbj|BAC98918.1| ribosomal protein S3 [Brassica napus] Length = 553 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 5/183 (2%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ G+ ++ I+ II+ +++K+R Sbjct: 367 NLLGKD-KVMELIEKFKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSF 424 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGV 149 LSN TN++ + ++ +A+LIAQ I+ QL+ +R F + V+ + +G+ Sbjct: 425 LSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPKR-VEGI 483 Query: 150 KVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 ++ SGRL AE ++T+CY + IDY +A T YG G+KV++S + Sbjct: 484 RICFSGRLKDAAEKAQTKCYKHRKTSCNVFNQKIDYASAEVSTRYGILGVKVWISYSQKK 543 Query: 209 SDS 211 Sbjct: 544 GGR 546 Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RLG N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 ++ K R ++ P K + + K+ Sbjct: 60 CILLHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWW 98 >gi|328541204|gb|AEB21826.1| ribosomal protein S3 [Kurzia brevicalycina] Length = 375 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|164422218|gb|ABY55191.1| ribosomal protein S3 [Bambusa oldhamii] Length = 558 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 374 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 430 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 431 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 490 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 491 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 543 Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ------AGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTILTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|328541268|gb|AEB21858.1| ribosomal protein S3 [Bazzania tricrenata] Length = 374 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 368 Query: 199 KVYVSL 204 KV+VS Sbjct: 369 KVWVSY 374 >gi|302749101|gb|ADL64030.1| ribosomal protein S3 [Triphyophyllum peltatum] Length = 477 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+ Sbjct: 304 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 362 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ + + + FR + V+ M+ G +G+++ Sbjct: 363 NTLIESVKIKSFYQSASPIAQDISLKPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 422 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 423 SGRLEGAEIARTECGKYGKTSRNVFNHKIDYASAEVSTRYGILGVKVWISY 473 >gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1] Length = 255 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 11 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 63 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 64 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 123 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI Sbjct: 124 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 182 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + E+ + Sbjct: 183 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQA 216 >gi|302748583|gb|ADL63772.1| ribosomal protein S3 [Blandfordia grandiflora] Length = 476 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ L G+ + I + + G +++K+R LSN T Sbjct: 308 KVMKLIEKFLDLGGIGEF---LKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSFLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPFIMPKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 425 CCSGRSGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|22550360|ref|NP_689361.1| ribosomal protein S3 [Chaetosphaeridium globosum] gi|22417026|gb|AAM96625.1|AF494279_30 ribosomal protein S3 [Chaetosphaeridium globosum] Length = 324 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 48/96 (50%) Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 +A IA I Q++E + FR K ++ G+++ SGR NGAE+++TEC Sbjct: 229 YQSAASIAADIVQKIESKKSFRSICKFLFSNSFGASIKGIRIACSGRFNGAEIAKTECRK 288 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G P IDY A T YG GIKV+V + Sbjct: 289 YGASPFHVFSEKIDYAQTKASTPYGIMGIKVWVCYK 324 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M QK+NPI RL VN + +S WF+ Y LL+EDL +REY V + +I R+ Sbjct: 1 MAQKVNPISLRLDVNRSSDSLWFSDYY-YTKLLYEDLNLREYFNS--IHKMVTRCIIHRS 57 Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 I ++ K + + K+ + ++ Sbjct: 58 FGLYTCIHLFCLPRKRRKHKVSRLLNSVTKEQATVSMR 95 >gi|328541320|gb|AEB21884.1| ribosomal protein S3 [Lepidozia spinosissima] Length = 375 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748939|gb|ADL63949.1| ribosomal protein S3 [Pentaphragma sp. Duangjai 49] Length = 478 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 9/170 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + G+ ++ R I + + + G ++ K+R LSN T Sbjct: 312 KVMQLIEKFIDLGGIGEL---RKGMEMMIEIILRKRRIPYGYNFYLNEVHKMRSLLSNRT 368 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 + ++ ++ +A+LIAQ I+ Q + FR + + V++ M+ G +G+++ Sbjct: 369 KTNTNIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSILSQIVKNIPLVMKKGVEGIRI 428 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 SGR GAE++RTEC G+ IDY A T YG G+KV+ Sbjct: 429 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 478 >gi|302748867|gb|ADL63913.1| ribosomal protein S3 [Mauloutchia chapelieri] Length = 478 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIQLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS] gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735 delta SOWgp] gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira] Length = 263 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|302748901|gb|ADL63930.1| ribosomal protein S3 [Nerium oleander] Length = 484 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + + G +++K+R LSN T Sbjct: 311 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNKT 367 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +GV++ Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMTKGVEGVRI 427 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 428 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480 >gi|56180919|gb|AAV83558.1| ribosomal protein S3 [Halimeda cuneata] Length = 161 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 4/135 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116 + I++++ +P ++I + + NS++ + + + I Sbjct: 61 IEDHLEIVIHAQKPDILIKGENLQKQIKTFLFQYRQIEWNSKLKVILYIFQCKTSASAAI 120 Query: 117 AQSIAQQLERRVVFR 131 A I + LE+R+ ++ Sbjct: 121 ADFIVEHLEKRIPYK 135 >gi|89280717|ref|YP_514647.1| ribosomal protein S3 [Oryza sativa Indica Group] gi|194033228|ref|YP_002000565.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|1173302|sp|P46773|RT03_ORYSJ RecName: Full=Ribosomal protein S3, mitochondrial gi|769732|dbj|BAA04792.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|23495388|dbj|BAC19869.1| Ribosomal protein S3 [Oryza sativa Japonica Group] gi|74100084|gb|AAZ99248.1| ribosomal protein S3 [Oryza sativa Indica Group] gi|74100139|gb|AAZ99302.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|74100193|gb|AAZ99355.1| ribosomal protein S3 [Oryza sativa Japonica Group] gi|285026173|dbj|BAI68005.1| ribosomal protein small subunit 3 [Oryza sativa Indica Group] Length = 538 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 354 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 410 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 411 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 470 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 471 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 523 Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ------AGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTILTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|328541222|gb|AEB21835.1| ribosomal protein S3 [Hygrolembidium rigidum] Length = 375 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541218|gb|AEB21833.1| ribosomal protein S3 [Lembidium nutans] Length = 375 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748967|gb|ADL63963.1| ribosomal protein S3 [Pleea tenuifolia] Length = 476 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R+ FR + V+ M G +G+++ Sbjct: 367 NTFIESVKIKSVYQSASPIAQDISFQPRNKRISFRSIFSQIVKDIPLIMPKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|328541182|gb|AEB21815.1| ribosomal protein S3 [Chiloscyphus semiteres] Length = 376 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDRIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|289065030|ref|YP_003433841.1| ribosomal protein small subunit 3 [Oryza rufipogon] gi|285026112|dbj|BAI67945.1| ribosomal protein small subunit 3 [Oryza rufipogon] Length = 527 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 343 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 399 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 400 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 459 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 460 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 512 >gi|328541314|gb|AEB21881.1| ribosomal protein S3 [Lepidozia reptans] gi|328541316|gb|AEB21882.1| ribosomal protein S3 [Lepidozia sp. 2 Shaw 5789] gi|328541318|gb|AEB21883.1| ribosomal protein S3 [Lepidozia fauriana] gi|328541324|gb|AEB21886.1| ribosomal protein S3 [Lepidozia laevifolia] gi|328541326|gb|AEB21887.1| ribosomal protein S3 [Lepidozia bisbifida] Length = 375 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541206|gb|AEB21827.1| ribosomal protein S3 [Kurzia helophila] Length = 375 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + Sbjct: 247 FSSRYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRS 306 Query: 137 AVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 + + G+++ SGRLNGAE+++TE G L IDY A T YG Sbjct: 307 IFRQIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGI 366 Query: 196 CGIKVYVSL 204 G+KV+VS Sbjct: 367 LGVKVWVSY 375 >gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 278 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 6/171 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95 I E+ L + G + + TH II+ + ++G+KG I ++ +K Sbjct: 24 INEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGEKGRRIRELTSLVQKRFKFP 83 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + + L +V ++A A+S+ +L + RRA ++ M GA G +V+ SG Sbjct: 84 ENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSG 143 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +L A ++ + +G + Q R +D G GIKV + Sbjct: 144 KLRAA-RAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQGVLGIKVKIMK 193 >gi|328541246|gb|AEB21847.1| ribosomal protein S3 [Zoopsis macrophylla] Length = 374 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYV 202 KV+V Sbjct: 371 KVWV 374 >gi|328541242|gb|AEB21845.1| ribosomal protein S3 [Zoopsis leitgebiana] Length = 374 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TEC G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYV 202 KV+V Sbjct: 371 KVWV 374 >gi|328541190|gb|AEB21819.1| ribosomal protein S3 [Kurzia sp. Brown 03/140a] Length = 375 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40] gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357] gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae] gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357] Length = 266 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210 >gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293] gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181] gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293] gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181] gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163] Length = 266 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210 >gi|302748639|gb|ADL63800.1| ribosomal protein S3 [Chamaedorea tenella] Length = 474 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 306 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 362 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 363 NNNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 422 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 423 CCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPATVSTRYGISGVKVRIS 474 >gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88] gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger] Length = 266 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHR 221 KV + SD A + Sbjct: 188 KVKIMRG-----SDPEGKAGPQK 205 >gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+] gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+] Length = 262 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKSLP 208 >gi|145615557|ref|XP_360299.2| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15] gi|145022366|gb|EDK06386.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15] Length = 262 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 18/206 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V ++A +S+ +L + RRA ++ Sbjct: 70 IRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 188 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + SD A + + Sbjct: 189 KVKIMRG-----SDPEGKAGPQKSLP 209 >gi|328541322|gb|AEB21885.1| ribosomal protein S3 [Lepidozia sp. 1 von Konrat 6/20-4] Length = 375 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|288191172|gb|ADC43939.1| ribosomal protein S3 [Goupia glabra] Length = 505 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 373 NEMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 432 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 433 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 492 Query: 198 IKVYVSL 204 +KV++S Sbjct: 493 VKVWISY 499 >gi|223927413|gb|ACN23331.1| ribosomal protein S3 [Halimeda renschii] Length = 191 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 + I++ + +P ++IGKKG ++E +K++ + Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95 >gi|288191299|gb|ADC44002.1| ribosomal protein S3 [Heterostemon otophorus] Length = 494 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 6/144 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q Sbjct: 351 IEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 410 Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L ++ FR + V+ M+ G +G+++ SGR GAE++RTEC G+ Sbjct: 411 LRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFN 470 Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203 IDY +A T YG G+KV++S Sbjct: 471 QKIDYASAEVSTRYGISGVKVWIS 494 >gi|328541188|gb|AEB21818.1| ribosomal protein S3 [Kurzia dendroides] Length = 375 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIRKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748537|gb|ADL63749.1| ribosomal protein S3 [Ancistrocladus tectorius] Length = 480 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 307 KVMKLIEKFIDLGGIREL---IKGIEMMIEIILKNRIIPYGYNSYLNEVKKMRSLLSNRT 363 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 364 NTNTLIESVKIQSFYKSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 423 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 424 CCSGRLEGAEIARTECGKYGKTSRNVFNHKIDYASAEVSTRYGILGVKVWISY 476 >gi|302748917|gb|ADL63938.1| ribosomal protein S3 [Oncidium sphacelatum] Length = 476 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 L+ +D I E ++ + + ++ I + + G +++K+R Sbjct: 302 NLMGQDKVI-ELIEKFIDLGRIGELQNRI---EMMIEIILRNRRIPYGYNSYLNEVQKMR 357 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRF 144 LSN T + + ++ +A+LIAQ I+ Q FR + VQ M Sbjct: 358 SFLSNRTKTNTLMESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSQIVQDIPLRMPQ 417 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 418 GVEGIRICCSGRSGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|328541310|gb|AEB21879.1| ribosomal protein S3 [Lepidozia setigera] Length = 375 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541224|gb|AEB21836.1| ribosomal protein S3 [Trichocolea tomentosa] Length = 375 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QMKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|130076562|gb|ABO31939.1| ribosomal protein S3 [Cercidiphyllum japonicum] Length = 481 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 306 KVIELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 365 NTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 425 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 475 >gi|302748665|gb|ADL63813.1| ribosomal protein S3 [Coriaria myrtifolia] Length = 504 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 7/174 (4%) Query: 38 KIREYLQCHLKQAGVAKILI-ERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNM 94 K+ E + + G+ ++ R I + + G +I+K+R LSN Sbjct: 325 KVIELIDKFIDLGGIGELRKGFRKGIEMMIEIILRNRRIPYGYNSYLNEIKKMRSLLSNR 384 Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVK 150 T + + ++ +A+ IAQ I+ QL + FR + V+ M+ G G++ Sbjct: 385 TKTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDLSLVMKKGVGGIR 444 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 ICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 498 >gi|302749037|gb|ADL63998.1| ribosomal protein S3 [Sparganium americanum] Length = 476 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + + +I + I + + + G +++K+R LSN T Sbjct: 308 KVMELIDKLID---LGRIGLLIKGIEMMIEIILRKRIIPYGYNSYLNEVKKMRSFLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|328541194|gb|AEB21821.1| ribosomal protein S3 [Megalembidium insulanum] gi|328541196|gb|AEB21822.1| ribosomal protein S3 [Isolembidium anomalum] Length = 375 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis] Length = 230 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L G + + + T +I+ + R ++G KG Sbjct: 13 ADGVFYAEL-------NELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLGVKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + + +ID T G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + Sbjct: 185 KVRIMK 190 >gi|302748971|gb|ADL63965.1| ribosomal protein S3 [Polygala cruciata] Length = 498 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 5/172 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + +++K+R LSN T + Sbjct: 324 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILIKNQIPYGYNSYLNEVKKMRSLLSNRTKT 382 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + + M+ G +G+++ Sbjct: 383 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVTDIPLVMKKGVEGIRICC 442 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 SGRL GAE++RTEC G+ IDY +A T YG G+KV++S Sbjct: 443 SGRLKGAEIARTECGKYGKTSRNVFHHKIDYASAEVSTRYGISGVKVWISYG 494 >gi|223927419|gb|ACN23335.1| ribosomal protein S3 [Halimeda distorta] Length = 172 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFLRTILPKKYNKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 + I++ + +P ++IGKKG ++E +K++ + Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95 >gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC 10500] gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC 10500] Length = 266 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209 >gi|45775225|gb|AAR01945.1| ribosomal protein S3 [Cycas revoluta] Length = 579 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 6/175 (3%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIH 100 L L G LI+ II+ + + G +++K+R LS+ TN+ Sbjct: 396 LMEKLIDLGGIGELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMRSLLSDGTNTNTS 455 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGR 156 + ++ +A+LIAQ I+ QL FR + V+ M G+++ SGR Sbjct: 456 IGSVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDITFVMPKRVKGIRICCSGR 515 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 L GAE++RTEC G+ IDY +A T YG G+KV++S +E Sbjct: 516 LKGAEIARTECREYGKTSCNVFDHKIDYASAKVCTRYGILGVKVWISYSNERKGR 570 Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +++NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 +I K I ++ R + ++G Sbjct: 60 CIIHHFTKRTFIHLFLPRRPRRLKRRGKS 88 >gi|769730|dbj|BAA06834.1| ribosomal protein S3 [Oryza sativa Japonica Group] Length = 499 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 315 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 371 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 372 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 431 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 432 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 484 >gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001] Length = 261 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + E+ + Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQA 221 >gi|328541302|gb|AEB21875.1| ribosomal protein S3 [Telaranea heterotexta] Length = 375 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|223927422|gb|ACN23337.1| ribosomal protein S3 [Halimeda opuntia] Length = 174 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFLRTILPKKYNKAGFEKIKISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 + I++ + +P ++IGKKG ++E +K++ N+ Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKNL 95 >gi|223928072|gb|ACN23700.1| ribosomal protein S3 [Halimeda tuna] Length = 153 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 11/151 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151 >gi|302748553|gb|ADL63757.1| ribosomal protein S3 [Apium graveolens] Length = 486 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + +++K+R L N TN+ Sbjct: 313 KVMELIDKFIGLGGIGEL-IKGIEMMLEIILRNRIIPYGYNSYLNEVKKMRSLLFNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIAKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 432 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 482 >gi|328541282|gb|AEB21865.1| ribosomal protein S3 [Bazzania intermedia] Length = 373 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368 Query: 199 KVYVS 203 KV+VS Sbjct: 369 KVWVS 373 >gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 230 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR--- 88 L E + E L L + G A + I T II+ + R ++G+KG I ++ Sbjct: 17 FLAE---LNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV 73 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 +K N + + L +V + A A+S+ +L + RRA ++ M GA G Sbjct: 74 QKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKG 133 Query: 149 VKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +VI SG+L A+ ++ + +G + + +ID G GIKV + L Sbjct: 134 CEVIVSGKLR-AQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQGVLGIKVKIML 190 >gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639] gi|76363394|sp|Q4JB46|RS3_SULAC RecName: Full=30S ribosomal protein S3P gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639] Length = 231 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 4/187 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 + + EYL A A + I +T R+I+Y+ RP LIIGK G I+++ + L Sbjct: 16 VMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFG 75 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++V PE+NA ++A +A LE+ FRRA ++ M GA G +VI SG Sbjct: 76 LENPQITVTAAENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSG 135 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L +E ++ E EG V Q L ID +A G G++V ++ D Sbjct: 136 KLT-SERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVITKPTRSIDKIE 194 Query: 214 TIPAAEH 220 E Sbjct: 195 LKEKVEK 201 >gi|50291535|ref|XP_448200.1| hypothetical protein [Candida glabrata CBS 138] gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata] Length = 247 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGI 184 Query: 199 KVYVSL 204 KV + Sbjct: 185 KVKIMR 190 >gi|291498608|gb|ADE08082.1| rps3 [Triticum aestivum] Length = 561 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 377 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 433 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++ Sbjct: 434 NTNTLIESVKIQSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 493 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 494 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 546 Score = 41.5 bits (96), Expect = 0.089, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K I + + +K + + Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKKDKKSRPVLQEKGWW 100 >gi|223928000|gb|ACN23652.1| ribosomal protein S3 [Halimeda hummii] Length = 165 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 12/166 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+ KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRXKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ + ++IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKLDILIGKKSENLEIFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155 A+ IA I + LE+RV ++ K+ +Q + A G+KV +G Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFGLLKKHLQR-QKHSALGMKVQIAG 165 >gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4] gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4] Length = 239 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 + + E+L A A I +T R+ +Y+ RP +IIGK G I+++ + L N Sbjct: 16 VMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIKRLAQILERYFN 75 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++V + KPE+NA ++A +A LE+ FRRA ++ M GA G +VI SG Sbjct: 76 LESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIMNAGALGAEVIVSG 135 Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVS 209 ++ +E ++ E EG V L +D A+A G G++V ++ D++ Sbjct: 136 KIT-SERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLKMGIYGVQVVITKPLRTVDKIL 194 Query: 210 DSDSTIPAAEHRVVE 224 + T +E E Sbjct: 195 LKEKTETTSESTEAE 209 >gi|328541178|gb|AEB21813.1| ribosomal protein S3 [Arachniopsis major] Length = 376 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNG+E+++TEC G L IDY A T YG G+ Sbjct: 311 RIKKCPYVKGIRIGCSGRLNGSEIAKTECRKCGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|302748741|gb|ADL63851.1| ribosomal protein S3 [Floerkea proserpinacoides] Length = 508 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ G+A+ R I + + G ++ K+R LSN T Sbjct: 326 KVMELIEKLRNLGGIAE---WRKGIEMMIKIILRNIKIPYGYNSYLKEVIKMRFLLSNRT 382 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL +R FR + +Q M+ +G+++ Sbjct: 383 KTNALIESVKIEFVYQSASPIAQDISFQLRTKRKSFRSIFSQIVKDIQLVMQKRVEGIRI 442 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL GAE++RTEC G+ IDY T YG G+KV++S + Sbjct: 443 CCSGRLEGAEIARTECGKYGKTSRNLFNQKIDYAPVEVSTRYGISGVKVWISYSKKKGGR 502 >gi|302748834|gb|ADL63897.1| ribosomal protein S3 [Lamium sp. Qiu 95019] Length = 476 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 6/171 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL--ERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152 + ++ +A+ IAQ I+ QL ++ FR + V + G+++ Sbjct: 366 NTLIESVKIQSVYQSASPIAQDISFQLRTKKTRSFRSIFSQIVLNIPLVMKKRVTGIRIC 425 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GA+++RTEC G++ IDY A T YG G+KV++S Sbjct: 426 CSGRLKGAKIARTECGKYGKISRNLFNQKIDYAPAEVSTRYGILGVKVWIS 476 >gi|302748595|gb|ADL63778.1| ribosomal protein S3 [Brunellia sp. Lewis 3366] Length = 489 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 5/168 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 SGR GAE++RTEC G+ IDY A T YG G+KV+ Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 489 >gi|302749055|gb|ADL64007.1| ribosomal protein S3 [Stegolepis sp. Qiu 97132] Length = 476 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 308 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRA---MKRAVQSAMRFGADGVKV 151 + + ++ +A+LIAQ I+ Q FR + + ++ M G +G+++ Sbjct: 365 KTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIYSKIVKDIRLIMPKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|272716735|gb|ACZ95669.1| ribosomal protein S3 [Cedrus deodara] Length = 557 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 7/178 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL ++ IR L +L G L+ II+ + R + K+R Sbjct: 382 NLLGKEKVIR--LVENLISLGGIGGLMRGIGMMIEIILRNRRIPYGYNYYLNEGRKMRSL 439 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+LIAQ I+ QL R FR + V+ M G Sbjct: 440 LSNRTNTNTLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSKIVRDIPLVMPKGV 498 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G+++ SGRL GAE++RTEC G+ R IDY +A T YG G+KV++S Sbjct: 499 RGIRICCSGRLKGAEIARTECREYGKTSCNVFRHKIDYASAKVYTRYGILGVKVWISF 556 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 +I K I ++ R + ++G + + I Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKQRGRSRPGKGRWWAFGKVRSIGFFF 108 >gi|115278625|ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides] gi|114432116|gb|ABI74665.1| ribosomal protein S3 [Tripsacum dactyloides] Length = 559 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + K+ I + + + G +++K+R LSN T Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 431 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + + + M G +G+++ Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSILSKIVKDIPLIMPKGVEGIRI 491 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T G G+KV +S Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544 Score = 39.6 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54 M +K NPI RL +N + + F+ YG L++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 +I K R ++ P + K D + K Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98 >gi|302748760|gb|ADL63860.1| ribosomal protein S3 [Glaucidium palmatum] Length = 485 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ + I + + + G +++K+R LSN T Sbjct: 304 KVMELIDKFIDLGGIGE---WIKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 360 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V++ M+ G +G+++ Sbjct: 361 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNMKLVMKKGVEGIRI 420 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 421 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 473 >gi|164429154|ref|XP_956174.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A] gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A] Length = 262 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + + Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209 >gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1] Length = 228 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 + + L + EYLQ AG + ++RT I +Y RPGL+IG+ G+ I Sbjct: 9 EKKFVSDNIKK-LLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRHGSKI 67 Query: 85 EKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 + + + + V EV ++N +I++ IA LE+ +R+A ++ + Sbjct: 68 KAMTSILETKYGLESPQIEVKEVENADLNPQVISKKIALSLEKGWNYRKAGNTTLRRIID 127 Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVY 201 A GV + G+++G E +RT+ ++ G + + RA + G +VA G+ GI V Sbjct: 128 QHARGVLIRIGGKISG-ERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIYVR 186 Query: 202 VSLRDEVSDSDST------IPAAEHRVVEKDS 227 + +D + + IP + + + ++S Sbjct: 187 LLRQDYHLPDEISINTERKIPVPDKKSMPEES 218 >gi|254372215|ref|ZP_04987706.1| hypothetical protein FTCG_01281 [Francisella tularensis subsp. novicida GA99-3549] gi|151569944|gb|EDN35598.1| hypothetical protein FTCG_01281 [Francisella novicida GA99-3549] Length = 72 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%) Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 + SGRL GAE++R+E +GRVPLQT RA +DY TA A T YG G+KV++ + + Sbjct: 1 MVSGRLGGAEIARSEWARDGRVPLQTFRADVDYATAEALTTYGVIGVKVWIYKGEILPGQ 60 Query: 212 DSTIPAAEHRVVEKDS 227 AE + +K + Sbjct: 61 -----IAEKKNNKKGA 71 >gi|302904072|ref|XP_003048997.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 260 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 18/214 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227 KV + + E+ + Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQA 221 >gi|302748907|gb|ADL63933.1| ribosomal protein S3 [Nuphar sp. Qiu M114] Length = 482 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 22/196 (11%) Query: 30 GALLHED----------LKIREYLQCHLKQAGVAKI----LIERTHKNCR--IIVYSARP 73 L ED +K+R + + K I K I + Sbjct: 287 SNNLIEDAREQLLGQLRIKLRNLMDKEKVMELIDKFIDLGGIGELIKGIEMMIEIILRNR 346 Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-F 130 + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q + F Sbjct: 347 RIPYGYNSYLNEVQKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSF 406 Query: 131 RRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 R + V+ M G +G+++ SGR GAE++RTEC G+ IDY A Sbjct: 407 RSIFSQIVKDIPLVMPKGVEGIRISCSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPA 466 Query: 188 VAETAYGSCGIKVYVS 203 T YG G+KV +S Sbjct: 467 EVSTRYGISGVKVRIS 482 >gi|223927398|gb|ACN23321.1| ribosomal protein S3 [Halimeda micronesica] Length = 162 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R Sbjct: 1 MGQKVHPLGFRLGITQLHLSQWYASKKYYSKYVLEDHFLRTILQKQYAKAGFEKIEISRK 60 Query: 61 HKNC-RIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNSEIHLSVNEVPKPEIN---- 112 +N I++++ +P ++IGKKG I+K + + + + E + Sbjct: 61 IENHLEIVIHAQKPAVLIGKKGPPEGLQNVIKKLIFKYRGRSLSKNSFDKNNYEADLKRL 120 Query: 113 --------------ATLIAQSIAQQLERRVVFR 131 A+ IA I LE+RV ++ Sbjct: 121 KVVLYVIKSKTNASASSIADFIIGNLEKRVPYK 153 >gi|328541264|gb|AEB21856.1| ribosomal protein S3 [Psiloclada clandestina] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748535|gb|ADL63748.1| ribosomal protein S3 [Amborella trichopoda] Length = 487 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%) Query: 30 GALLHED----------LKIR------EYLQCHLKQAGVAKILIERTHKNCRIIVYSARP 73 L ED +K+R E+++ + + ++ I+ II+ + + Sbjct: 288 SNNLIEDAREQLLGKLRIKLRNLMGKVEFIEKLIDLGRIGEL-IKGIEMMIEIILRNRKI 346 Query: 74 GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRR 132 +++K+R LSN + + ++ +A+ IAQ I+ Q + FR Sbjct: 347 PYGYNSYLNEVQKMRSFLSNKKKTHTIIESVKIKSVYQSASPIAQDISFQPRNKTRSFRS 406 Query: 133 AMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 + +Q M G +G+++ SGRL GAE++RTEC G+ IDY A Sbjct: 407 IFSQIVKDIQLVMPKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFHQKIDYAPAEV 466 Query: 190 ETAYGSCGIKVYVSL 204 T YG G+KV +S Sbjct: 467 ATRYGISGVKVRISY 481 >gi|58699233|ref|ZP_00374035.1| Ribosomal protein S3, C-terminal domain [Wolbachia endosymbiont of Drosophila ananassae] gi|58534249|gb|EAL58446.1| Ribosomal protein S3, C-terminal domain [Wolbachia endosymbiont of Drosophila ananassae] Length = 63 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/62 (59%), Positives = 46/62 (74%) Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GA G+KV SGRL GAE++RTE Y EGR+PL TLRA+IDY A A+T YG G+KV+V Sbjct: 1 MGARGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLRANIDYAFAEAKTIYGIIGVKVWVY 60 Query: 204 LR 205 + Sbjct: 61 IG 62 >gi|328541294|gb|AEB21871.1| ribosomal protein S3 [Neogrollea notabilis] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|293333308|ref|NP_001169131.1| hypothetical protein LOC100382976 [Zea mays] gi|223975097|gb|ACN31736.1| unknown [Zea mays] Length = 266 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G+ G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGENGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209 >gi|328541240|gb|AEB21844.1| ribosomal protein S3 [Telaranea chaetocarpa] Length = 383 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + +EK++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 258 RYYYLEKMQSLFSDQTKTNTLIWPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 317 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 318 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYARTQASTPYGILGV 377 Query: 199 KVYVSL 204 KV+VS Sbjct: 378 KVWVSY 383 >gi|302749107|gb|ADL64033.1| ribosomal protein S3 [Vahlia capensis] Length = 495 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 ++ E ++ + + ++ I+ II+ + R +++K+R LSN T + Sbjct: 322 RVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 441 SGRLAGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 491 >gi|302748569|gb|ADL63765.1| ribosomal protein S3 [Basella alba] Length = 493 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 327 KVMKLIEKFIYLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRAFLSNRTKT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR+ + + S M+ G +G+++ Sbjct: 386 NTLIKSKKIKSVYQSASTIAQDISFQPKNKRRSFRKIFSILVKNIPSVMKKGVEGIRISC 445 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 SGRL GAE++RTEC G+ L IDY +A T YG G+KV+ Sbjct: 446 SGRLEGAEIARTECRKYGKTSCNVLDQKIDYASAEVSTRYGILGVKVW 493 >gi|272716560|gb|ACZ95570.1| ribosomal protein S3 [Cephalotaxus sinensis] Length = 763 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 615 GMMIGILPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASSIAQDI 674 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL FR + V+ M G G+++ SGRL GAE++RTEC G+ Sbjct: 675 SFQLRDGTRSFRSIFGQIVRDIPLVMPKGVGGIRICCSGRLKGAEIARTECREYGKTSCN 734 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 R IDY A T YG G+KV++ Sbjct: 735 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 763 >gi|328541208|gb|AEB21828.1| ribosomal protein S3 [Kurzia trichoclados] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+V+ Sbjct: 370 KVWVTY 375 >gi|302748931|gb|ADL63945.1| ribosomal protein S3 [Parnassia grandifolia] Length = 488 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 318 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 376 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 377 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 436 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 437 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 487 >gi|302749017|gb|ADL63988.1| ribosomal protein S3 [Saruma henryi] Length = 486 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 318 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILKNRRIPYGYNSYLNEVQKMRSLLSNRT 374 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 375 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 434 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 435 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAFAEVSTRYGISGVKVRIS 486 >gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255] Length = 264 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 18/208 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T IIV + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 KV + SD A + + Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210 >gi|328541272|gb|AEB21860.1| ribosomal protein S3 [Paracromastigum macrostipum] gi|328541274|gb|AEB21861.1| ribosomal protein S3 [Hyalolepidozia microphylla] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541198|gb|AEB21823.1| ribosomal protein S3 [Kurzia hippuroides] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T+YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTSYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748565|gb|ADL63763.1| ribosomal protein S3 [Austrobaileya scandens] Length = 489 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 320 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSVLSNRTNT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M G +G+++ Sbjct: 379 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISY 489 >gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407] Length = 264 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEHR 221 KV + SD A + Sbjct: 188 KVKIMRG-----SDPDGKAGPQK 205 >gi|328541306|gb|AEB21877.1| ribosomal protein S3 [Telaranea palmata] Length = 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302749051|gb|ADL64005.1| ribosomal protein S3 [Staphylea trifolia] Length = 475 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 367 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 427 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 475 >gi|289618451|emb|CBI55175.1| unnamed protein product [Sordaria macrospora] Length = 262 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209 >gi|297619583|ref|YP_003707688.1| ribosomal protein S3 [Methanococcus voltae A3] gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3] Length = 218 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 4/186 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EY L +AG + I +++T RI V++ +PG +IG+KG ++++ + L + Sbjct: 16 INEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLRTVYKIE 75 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V ++ +++ ++ IA LE+ + FR+ AV+ M GA GV +I SG+L Sbjct: 76 NPQIEVKQIENADLDPAVVGHKIAASLEKGMHFRKTAHSAVRRVMNAGAKGVSIIVSGKL 135 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 +G E SRTE +++G + + + +A+ G G+ V + L D + I Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPSEELVMKSHQLAKLKLGVVGVTVKIMLPDVSLPDEIVI 194 Query: 216 PAAEHR 221 + E + Sbjct: 195 TSGEIK 200 >gi|302748585|gb|ADL63773.1| ribosomal protein S3 [Borago officinalis] Length = 458 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+ LI+ II+ + R +++K+R LSN T++ Sbjct: 277 KVMELIEK-FIDLGMKGELIKGIEMMVEIILRNRRIPYGYNSYLNEVQKMRSLLSNKTST 335 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V++ M+ G +G+++ Sbjct: 336 NTLIKSVKINSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNIPLVMKKGVEGIRICC 395 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 396 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 453 >gi|288191287|gb|ADC43996.1| ribosomal protein S3 [Parnassia grandifolia] Length = 505 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 449 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499 >gi|302749035|gb|ADL63997.1| ribosomal protein S3 [Smilax sp. Qiu 95117] Length = 470 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 302 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTKT 360 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 361 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPFIMPKGVEGIRICC 420 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 421 SGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 470 >gi|223928075|gb|ACN23702.1| ribosomal protein S3 [Halimeda tuna] Length = 154 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 11/151 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112 + I++++ +P + IGKK ++E +K++ +I + + + + Sbjct: 61 IEDHLEIVIHAQKPDIXIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120 Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151 >gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3, putative [Penicillium marneffei ATCC 18224] gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Penicillium marneffei ATCC 18224] Length = 266 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209 >gi|302748603|gb|ADL63782.1| ribosomal protein S3 [Cabomba sp. Qiu 97027] Length = 473 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ R + + + G +++K+R LSN T Sbjct: 307 KVMELIEKFIDLGGIGEL---RKGIEMILEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 363 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152 N+ + ++ +A+ IAQ I+ Q R FR + + + M G +G+++ Sbjct: 364 NTNTLMESVKIKSVYQSASPIAQDISFQPRSRS-FRSILSQIVKDIPLVMPKGVEGIRIS 422 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 423 CSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVRIS 473 >gi|6324151|ref|NP_014221.1| Rps3p [Saccharomyces cerevisiae S288c] gi|1173255|sp|P05750|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13; AltName: Full=YS3 gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae] gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae] gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae] gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789] gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a] gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291] gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118] gi|285814479|tpg|DAA10373.1| TPA: Rps3p [Saccharomyces cerevisiae S288c] gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796] gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13] gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23] gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3] Length = 240 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 184 Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223 KV + + D+ + I E + Sbjct: 185 KVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 217 >gi|302748649|gb|ADL63805.1| ribosomal protein S3 [Cinnamodendron ekmanii] Length = 487 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 479 >gi|272716552|gb|ACZ95564.1| ribosomal protein S3 [Torreya californica] Length = 802 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 6/149 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 654 GMMIGIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDI 713 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL FR R V+ M G G+++ GRL GAE++RTEC G+ Sbjct: 714 SSQLRDGTRSFRSIFGRIVRDIPLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCN 773 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 R IDY A T YG G+KV++ Sbjct: 774 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 802 >gi|328541262|gb|AEB21855.1| ribosomal protein S3 [Acromastigum adaptatum] Length = 375 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYRKCGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|328541214|gb|AEB21831.1| ribosomal protein S3 [Chloranthelia berggrenii] Length = 373 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 249 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368 Query: 199 KVYVS 203 KV+VS Sbjct: 369 KVWVS 373 >gi|302748838|gb|ADL63899.1| ribosomal protein S3 [Laurus nobilis] Length = 483 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 314 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIKLVMPKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483 >gi|328541296|gb|AEB21872.1| ribosomal protein S3 [Telaranea wallichiana] Length = 375 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+V Sbjct: 370 KVWVXY 375 >gi|302695173|ref|XP_003037265.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8] gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8] Length = 266 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 ++ L + G + + TH II+ + ++G+KG I ++ +K + Sbjct: 23 DFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTSLVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 A +++ + +G + Q +R +D+ G GIKV + V Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQGVLGIKVKIMKGWDPEGLVGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748923|gb|ADL63941.1| ribosomal protein S3 [Orontium aquaticum] Length = 477 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 KI E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 309 KIMELIEKFIDLGGIGELNKGI---EMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRT 365 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKV 151 ++ + ++ +A+ IAQ I+ Q +R+ FR + + + M G +G+++ Sbjct: 366 HTNTLIESVKIKSVYQSASPIAQDISFQPRNKRISFRSIFSHIVKDIPLIMPKGVEGIRI 425 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 426 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 477 >gi|302748693|gb|ADL63827.1| ribosomal protein S3 [Decaisnea fargesii] Length = 478 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ + + FR + +Q M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISLKPRNKTRAFRSIFSKIVKDIQFVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY +A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478 >gi|302748804|gb|ADL63882.1| ribosomal protein S3 [Hypecoum imberbe] Length = 504 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ ++ G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M G +G+++ Sbjct: 382 NTLIESVKIQSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLYMPKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGR GAE++RTEC G+ +DY A T YG G+KV +S ++ Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYGISGVKVRISYSQKMKGR 499 >gi|328541202|gb|AEB21825.1| ribosomal protein S3 [Kurzia gonyotricha] Length = 374 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVS 203 KV+VS Sbjct: 370 KVWVS 374 >gi|288191231|gb|ADC43968.1| ribosomal protein S3 [Touroulia guianensis] Length = 473 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 301 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 357 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++ Sbjct: 358 KTNTLIESVKIQSVYQSASPIAQDISFQLRNKKRSLRSILSQIVKDIPLVMKKGVEGIRI 417 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G++ IDY A T YG G+KV++S Sbjct: 418 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGISGVKVWISY 470 >gi|328541220|gb|AEB21834.1| ribosomal protein S3 [Hygrolembidium rigidum] Length = 373 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYV 202 KV+V Sbjct: 370 KVWV 373 >gi|56181039|gb|AAV83638.1| ribosomal protein S3 [Halimeda tuna] Length = 181 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI-ER 59 MGQK++P+ FR+G+ S+W+A Y + ED IR L K+A +KI I + Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKRYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115 T + I++++ G++IG + + + + +I + + E N+ L Sbjct: 61 TDDHFEIVIHAQNLGILIGT--KSEKSEKSEKFKLFQKQIKEFIFHYRQSEWNSKLRVVL 118 Query: 116 -----------IAQSIAQQLERRVVFRRAMK 135 IA I + LERRV ++ Sbjct: 119 HIFRCKTSASSIADFIVEHLERRVPYKVVFN 149 >gi|302748965|gb|ADL63962.1| ribosomal protein S3 [Platanus occidentalis] Length = 483 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 434 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15] gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15] Length = 238 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 4/190 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 +K+ EYL + AG A + I ++ R+ +++ RP L+IG++G I K++ L + Sbjct: 16 VKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIRKLQAVLEKVFG 75 Query: 97 SE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 E + ++V++ E+NA + A IA+ LE FRR ++ M GA GV+++ SG Sbjct: 76 LEGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRRVAMATMRRIMEAGAVGVEIVISG 135 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHI--DYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L+ E +R E G+V + D A A+ G G++V + + Sbjct: 136 KLSR-ERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKLPLGIIGVEVRIIRPEAARPDIL 194 Query: 214 TIPAAEHRVV 223 P +E + Sbjct: 195 LRPDSEAAAI 204 >gi|328541308|gb|AEB21878.1| ribosomal protein S3 [Telaranea patentissima] Length = 375 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+V Sbjct: 370 KVWVXY 375 >gi|302748895|gb|ADL63927.1| ribosomal protein S3 [Nandina domestica] Length = 479 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 311 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 367 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++ Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIKLVMQKGVEGIRI 427 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 428 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 479 >gi|223927744|gb|ACN23484.1| ribosomal protein S3 [Halimeda cuneata] Length = 143 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNXVRTLLSKKYKRAKXEKIHIXXX 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++ GKK + ++++ + + + + +I Sbjct: 61 IEDHLEIVIHAQKPXILXGKKXEXXQTFQQQIKKAIFQYRQIXWNSXXKVIFYIFXXKIX 120 Query: 113 ATLIAQSIAQQLERRVV 129 A+ IA I + LE+RV Sbjct: 121 ASSIADFIVEHLEKRVP 137 >gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM 70294] gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM 70294] Length = 234 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 16/211 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T II+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGI 184 Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226 KV + R +V E++ Sbjct: 185 KVKIMRDPARSKVGPRALPDAVTIVEPKEEE 215 >gi|302748699|gb|ADL63830.1| ribosomal protein S3 [Dicentra sp. Qiu 95026] Length = 478 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + ++ G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIDKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYFNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748689|gb|ADL63825.1| ribosomal protein S3 [Daphnandra micrantha] Length = 478 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPIVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748871|gb|ADL63915.1| ribosomal protein S3 [Melianthus major] Length = 493 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 321 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNYYLNEVKKMRSLLSNRT 377 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 378 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKYIPLVMKKGVEGIRI 437 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSSNVFYNKIDYAPAEVSTRYGISGVKVWISY 490 >gi|328541292|gb|AEB21870.1| ribosomal protein S3 [Paracromastigum drucei] Length = 375 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGISGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|302748721|gb|ADL63841.1| ribosomal protein S3 [Elaeagnus sp. Qiu 95028] Length = 437 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93 ED K+ E ++ + G+ ++ I + R +++K+R LSN Sbjct: 255 KED-KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRRIPYGYNSYLNEVKKMRSLLSN 310 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV---FRRAMKRAVQSAMRFGADG-- 148 TN+ + ++ +A+ IAQ I+ QL R FR + V+ G Sbjct: 311 RTNTNTLIESVKIKSVYQSASPIAQDISFQLRMRNKTRSFRSIFSKIVKDIPLVMKKGVV 370 Query: 149 --VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +++ SGR GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 371 SGIRICCSGRSEGAEIARTECGKYGKTS--VFNQKIDYAPAEVSTRYGISGVKVWISYK 427 >gi|255711614|ref|XP_002552090.1| KLTH0B06974p [Lachancea thermotolerans] gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans] Length = 248 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 16/211 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQGVLGI 184 Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226 KV + R+ V E++ Sbjct: 185 KVKIMRDPARNRVGPKALPDAVKILEPKEEE 215 >gi|328541238|gb|AEB21843.1| ribosomal protein S3 [Pseudocephalozia paludicola] Length = 375 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISCKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] Length = 227 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFLEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211 A+ +++ + +G + Q + +ID G GIKV + L + ++ + Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPT 201 Query: 212 DSTIPAAEHRVVEKDS 227 ++++ Sbjct: 202 TPLPDLVTIHPPKEEN 217 >gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor] gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor] Length = 232 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + + +ID G GIKV + L Sbjct: 145 R-AQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIML 192 >gi|302748711|gb|ADL63836.1| ribosomal protein S3 [Dipsacus sp. Qiu 95111] Length = 484 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 311 KLMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+ IAQ I+ Q + + F + +K ++ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFHSIFSKIVKD-IRLVMKKGVEGIRIC 428 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RT+C G+ IDY A T YG G+KV++S Sbjct: 429 CSGRSKGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480 >gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Pichia angusta DL-1] Length = 235 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + T +I+ + ++G+KG Sbjct: 13 ADGVFYAEL-------NEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A +S+ +L + RRA ++ Sbjct: 66 INELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAYGVIRH 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+V+ SG+ GA +++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGVEVVISGKSKGA-RAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + Sbjct: 185 KVKIMK 190 >gi|288191134|gb|ADC43920.1| ribosomal protein S3 [Garcinia macrophylla] Length = 384 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+ LI+ II+ + R +++K+R +SN T + Sbjct: 212 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 270 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 271 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSIFTKIVKDILFVMKNGLEGIRICC 330 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GA+++RTEC G+ IDY A T YG G+KV++S Sbjct: 331 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 381 >gi|328541186|gb|AEB21817.1| ribosomal protein S3 [Telaranea tasmanica] Length = 375 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 8/173 (4%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGK------KGTDIEKIRKKLS 92 IR+ + + + I + GK + ++K++ S Sbjct: 204 IRKAIPTAEQGTRSGES-IRQPGSTLYFDAIIFLRHARFGKATSLSSRYYYLKKMQSLFS 262 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF-GADGVKV 151 + T + + ++ +A+LIAQ I+ +LE++ FR+ + + + G+++ Sbjct: 263 DQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFRQIKKCPYVKGIRI 322 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SG LNGAE+++TE G L IDY A T YG G+KV+VS Sbjct: 323 GCSGXLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGVKVWVSY 375 >gi|197131007|gb|ACH47052.1| ribosomal protein S3 [Isoetes engelmannii] gi|209916086|gb|ACI95881.1| ribosomal protein S3 [Isoetes engelmannii] Length = 399 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%) Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 KI S+ TN+ + ++ +A+LIA+ I+ +LER+ F+R + Sbjct: 260 TKIETLSSSRTNTFTSIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENC 319 Query: 145 GA----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G+++ SGR GAE+++TE G L IDY A A T YG+ G+KV Sbjct: 320 NCNKYAKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKV 379 Query: 201 YVSL 204 +VS Sbjct: 380 WVSY 383 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M QK+NPI RL N + +S WF+ +G LL++D +R+Y + + + + Sbjct: 1 MAQKVNPISVRLNFNRSSDSGWFSDYY-FGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I +Y Sbjct: 60 CIIHHFTKRTFIHLY 74 >gi|223928012|gb|ACN23660.1| ribosomal protein S3 [Halimeda lacunalis] Length = 157 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 14/154 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109 + I++++ +P ++IGKK I + + K I + + + Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120 Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQS 140 + +A+ IA I + LE+RV ++ K+ +Q Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 154 >gi|302748955|gb|ADL63957.1| ribosomal protein S3 [Phytolacca sp. Qiu 94109] Length = 475 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++ Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGIEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ L IDY +A T YG G+KV Sbjct: 429 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKV 475 >gi|302748927|gb|ADL63943.1| ribosomal protein S3 [Pachysandra terminalis] Length = 483 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 315 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 371 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMQKGVEGIRI 431 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 432 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|302748943|gb|ADL63951.1| ribosomal protein S3 [Petrophile canescens] Length = 478 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748897|gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera] Length = 483 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|314908362|gb|ADT62128.1| ribosomal protein S3 [Isoetes engelmannii] Length = 399 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%) Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 KI S+ TN+ + ++ +A+LIA+ I+ +LER+ F+R + Sbjct: 260 TKIETLSSSRTNTFTLIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENC 319 Query: 145 GA----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G+++ SGR GAE+++TE G L IDY A A T YG+ G+KV Sbjct: 320 NCNKYVKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKV 379 Query: 201 YVSL 204 +VS Sbjct: 380 WVSY 383 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M QK+NPI RL N + + WF+ +G LL++D +R+Y + + + + Sbjct: 1 MAQKVNPISVRLNFNRSSDLGWFSDYY-FGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I +Y Sbjct: 60 CIIHHFTKRTFIHLY 74 >gi|167933149|ref|ZP_02520236.1| 30S ribosomal protein S3 [candidate division TM7 single-cell isolate TM7b] Length = 89 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 1/90 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI RLG+ W+S WF G +G L ED IR YL L++A V++I+IERT Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLLEDKNIRAYLNKRLEKASVSRIVIERT 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 K I + +ARPGL+IGK + +K Sbjct: 60 LKLVTITICTARPGLVIGKVVRMLINSKKN 89 >gi|288191132|gb|ADC43919.1| ribosomal protein S3 [Garcinia latissima] Length = 385 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+ LI+ II+ + R +++K+R +SN T + Sbjct: 216 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 274 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + V+ M+ G +G+++ Sbjct: 275 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSILTKIVKDILFVMKKGLEGIRICC 334 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GA+++RTEC G+ IDY A T YG G+KV++S Sbjct: 335 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 385 >gi|272716618|gb|ACZ95613.1| ribosomal protein S3 [Diselma archeri] Length = 634 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 481 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 540 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 541 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 600 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 601 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 632 >gi|302748836|gb|ADL63898.1| ribosomal protein S3 [Lardizabala biternata] Length = 478 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY +A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKSGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478 >gi|302748729|gb|ADL63845.1| ribosomal protein S3 [Eschscholzia californica] Length = 481 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 5/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ ++ G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 314 KVMELIEKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 SGR GAE++RTEC G+ IDY A T YG G+KV + Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRI 481 >gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula] Length = 246 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 11/191 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 NFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPDG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ID G GIKV + D T Sbjct: 143 RG-QRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQGVLGIKVKIM-----LPHDPTG 196 Query: 216 PAAEHRVVEKD 226 + + + Sbjct: 197 KSGPKKPLPDQ 207 >gi|212723988|ref|NP_001132637.1| hypothetical protein LOC100194112 [Zea mays] gi|194694962|gb|ACF81565.1| unknown [Zea mays] Length = 232 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + + +ID G GIKV + L Sbjct: 145 R-AQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIML 192 >gi|302748987|gb|ADL63973.1| ribosomal protein S3 [Ranunculus sp. Qiu 95024] Length = 453 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+L + G+ + I + + + G +++K+R LSN T Sbjct: 285 KVIEFLDKLIDLGGIGE---WIKGIEMMIEIILRKRKIPYGYNSYLNEVKKMRSLLSNRT 341 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V++ M+ G+++ Sbjct: 342 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNLKFVMKKKVKGIRI 401 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTECY G+ IDY +A T YG G+KV +S Sbjct: 402 SCSGRSEGAEIARTECYKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 453 >gi|307101741|ref|YP_003875491.1| ribosomal protein S3 [Silene latifolia] gi|301338036|gb|ADK73328.1| ribosomal protein S3 [Silene latifolia] Length = 590 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 7/172 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 365 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYSSYLNEVQKMRSLLSNRTKT 423 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+LIAQ I+ QL+ + F + +K+ + M+ G +G+++ Sbjct: 424 NTLIESVKITSVYQSASLIAQDISFQLKNQSREFSSIFSKIVKK-IPLVMKKGIEGIRIC 482 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S Sbjct: 483 CSGRLQGAEIARTECGKYGKTSCNVLHQKRDYASALVSTRYGIVGVKVWISY 534 >gi|302748995|gb|ADL63977.1| ribosomal protein S3 [Rivina humilis] Length = 469 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 2/164 (1%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + ++ +A+ IAQ I+ + ++ R FR + V+ +G+++ SGR Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISLKPKKKRRSFRSIFSKIVKKIPLVMVEGIRICCSGR 425 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 L GAE++RTEC G+ L IDY +A T YG G+KV Sbjct: 426 LAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKV 469 >gi|328541256|gb|AEB21852.1| ribosomal protein S3 [Acromastigum stellare] Length = 376 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYVSL 204 KV+VS Sbjct: 371 KVWVSY 376 >gi|42559863|sp|Q95749|RT03_ARATH RecName: Full=Ribosomal protein S3, mitochondrial Length = 556 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI E ++ G+ ++ I+ II+ +++K+R LSN TN+ Sbjct: 375 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 433 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + ++ +A+LIAQ I+ QL+ +R F + V+ + G +G+++ SGR Sbjct: 434 KTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 492 Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 L AE ++T+CY + IDY T YG G+KV++S Sbjct: 493 LKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPVEVFTRYGILGVKVWISY 541 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 20/154 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RLG N + +S WF+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 +I K R ++ P K + + K+ + E + Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTE 117 Query: 115 LIAQSIAQQLERRVVFR-RAMKRAVQSAMRFGAD 147 E R R R ++ V+S Sbjct: 118 ----------EERNEVRGRGARKRVESIRLDDRK 141 >gi|302749009|gb|ADL63984.1| ribosomal protein S3 [Sarcandra chloranthoides] Length = 481 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSKIVKDIPLVMQKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 477 >gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739] gi|259495260|sp|C6A165|RS3_THESM RecName: Full=30S ribosomal protein S3P gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739] Length = 207 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 13/194 (6%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97 I EYL+ L++AG + I++T +++++ RPG +IG+ G I ++ + L N Sbjct: 17 IDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIRELTRILERRFNLE 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + V E+ NA + A +AQ LER V FRRA A+++ M GA GV++ SG+L Sbjct: 77 NPQIEVEEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKL 136 Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212 G E +++ + +G + P +TL + G A A G G+KV + D + Sbjct: 137 TG-ERAKSVRFYQGYIAKVGNPAETL---VSRGYAQALLKLGVLGVKVSIMPPDARLPDE 192 Query: 213 STIPAAEHRVVEKD 226 I + +E++ Sbjct: 193 IEIV---EKPIEEE 203 >gi|313631772|gb|EFR98960.1| ribosomal protein S3 [Listeria seeligeri FSL N1-067] Length = 76 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 45/75 (60%) Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG G+KV++ Sbjct: 2 GAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYR 61 Query: 205 RDEVSDSDSTIPAAE 219 + + + + + Sbjct: 62 GEVLPTKKNNVEGGK 76 >gi|302748784|gb|ADL63872.1| ribosomal protein S3 [Hernandia ovigera] Length = 483 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 7/171 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ ++R +++KIR LSN T + Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEVQKIRSLLSNRTKT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+ IAQ I+ Q RV+F + +K +Q M G G+++ Sbjct: 374 NTLIESVKIQSVYQSASPIAQDISFQPRNKTRSFRVIFSKIVKD-IQLVMPKGVTGIRIC 432 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 433 CSGRSGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|288191229|gb|ADC43967.1| ribosomal protein S3 [Froesia diffusa] Length = 477 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 305 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 361 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++ Sbjct: 362 KTNTLIESVKIQSVYQSASPIAQDISFQLRNKKRSLRSILSKIVKDIPLVMKKGVEGIRI 421 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G++ IDY A T YG G+KV++S Sbjct: 422 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGISGVKVWISY 474 >gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1] gi|27734525|sp|Q97BX1|RS3_THEVO RecName: Full=30S ribosomal protein S3P gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1] Length = 225 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 7/187 (3%) Query: 31 ALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 ++E +K + EYL + AG K+ ++RT I +Y RPGL+IG++G+ ++++ Sbjct: 5 KFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKVQQM 64 Query: 88 RKKLSNMT-NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146 + L + V +V P++N ++IA+ IA LE+ +R+A +++ + GA Sbjct: 65 TETLEKKYAIETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRTIDAGA 124 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GV + SG+++G E +R + ++ G V + + G + A+ G G+ V + Sbjct: 125 RGVLIKISGKISG-ERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTVKILN 183 Query: 205 RDEVSDS 211 + Sbjct: 184 PEYKLPD 190 >gi|302749003|gb|ADL63981.1| ribosomal protein S3 [Sabia sp. Qiu 91025] Length = 478 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ R I + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 367 NTNTFIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIPLVMPKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|272716564|gb|ACZ95573.1| ribosomal protein S3 [Taxus wallichiana var. chinensis] Length = 558 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113 ++I KN RI ++ K+R LS TN + ++ +A Sbjct: 410 GMMIGVIPKNRRI-------PYGYNYYSNEVRKMRSLLSGGTNVNTSIGSVKIESVYQSA 462 Query: 114 TLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYL 169 + IAQ I+ QL FR R V+ M G G+++ GRL GAE++RTEC Sbjct: 463 SPIAQDISFQLRDGTRSFRSIFGRIVRDIPLIMPKGVGGIRICCPGRLKGAEIARTECRE 522 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G+ R IDY A T YG G+KV++ Sbjct: 523 YGKTSCNAFRHQIDYAYAKVSTRYGILGVKVWIPFP 558 >gi|302748778|gb|ADL63869.1| ribosomal protein S3 [Hedyosmum arborescens] Length = 481 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 312 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 371 HTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 481 >gi|302748613|gb|ADL63787.1| ribosomal protein S3 [Campanula rotundifolia] Length = 484 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 5/178 (2%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D R ++ + G+ ++ I+ II+ R +++K Sbjct: 303 NLITKDKVKRRLIEKFIDLGGIGEL-IKGIEMMMEIILRKRRIPYGYNFYLNEVKKFLSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN T + ++ ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTKTNTLINSVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 EGIRISCSGRSEGAEIARTECGKYGKTSGNVFHQKIDYAPAQVSTRYGIPGVKVWISY 479 >gi|302748997|gb|ADL63978.1| ribosomal protein S3 [Roupala macrophylla] Length = 506 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 325 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 494 >gi|302748764|gb|ADL63862.1| ribosomal protein S3 [Gossypium arboreum] Length = 512 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 9/181 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKLSNM 94 K+ E ++ + G+ +++ II+ + + G +++K++ LSN Sbjct: 328 KVMELIEKFINLGGIEELIKGIEMIIEIIIL--RKTIIPYGYNNSYLNEVKKMQSLLSNR 385 Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVK 150 TN+ + ++ +A+ IAQ I+ QL ++ FR ++ V+ M+ G G++ Sbjct: 386 TNTNTLIESVKIKSVYQSASPIAQDISLQLRKKTRSFRSIFRKIVKEIPLVMKKGVSGIR 445 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210 + SGRL GAE++RTEC G+ IDY A T YG G+KV++S + Sbjct: 446 ICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGG 505 Query: 211 S 211 Sbjct: 506 R 506 >gi|328541270|gb|AEB21859.1| ribosomal protein S3 [Chloranthelia denticulata] Length = 373 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYV 202 KV+V Sbjct: 370 KVWV 373 >gi|328541298|gb|AEB21873.1| ribosomal protein S3 [Telaranea pulcherrima var. pulcherrima] Length = 375 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV++S Sbjct: 370 KVWLSY 375 >gi|328541304|gb|AEB21876.1| ribosomal protein S3 [Telaranea meridiana] Length = 374 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVS 203 KV+VS Sbjct: 370 KVWVS 374 >gi|302748563|gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum] Length = 478 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPIVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748961|gb|ADL63960.1| ribosomal protein S3 [Piper betle] Length = 482 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 7/170 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I + + +++KIR LSN TN+ Sbjct: 316 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILKNRSIPYNSYLNEVQKIRSLLSNRTNT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + + + M+ G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSQIWKEIPLVMQKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RT C G+ IDY A T YG G+KV +S Sbjct: 433 SGRLKGAEIARTACGKYGKTSRNVFNKKIDYAPAEVSTRYGILGVKVRIS 482 >gi|302748589|gb|ADL63775.1| ribosomal protein S3 [Brasenia schreberi] Length = 474 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 9/171 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+L + G+ + + + + G +++K+R LSN T Sbjct: 308 KVMEFLDQFIDLGGIGEF---LKGIEMILEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVI 152 + + ++ +A+ IAQ I+ Q R FR + V+ M G +G+++ Sbjct: 365 KTNTLMESVKIKSVYQSASPIAQDISFQPRSRS-FRSIFSQIVKDIPLVMPKGVEGIRIS 423 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 424 CSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVRIS 474 >gi|302748828|gb|ADL63894.1| ribosomal protein S3 [Juglans cinerea] Length = 499 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 5/168 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E + + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 328 ELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKTNTL 386 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGR 156 + ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ SGR Sbjct: 387 IESVKIKSVYQSASPIAQDISFELRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGR 446 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 447 SEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494 >gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea] Length = 234 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + ++ +++G + + R ++D G GIKV + L ++ Sbjct: 143 RG-QRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQGVLGIKVKIMLPWDQTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|328541300|gb|AEB21874.1| ribosomal protein S3 [Telaranea pulcherrima var. mooreana] Length = 374 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVS 203 KV+VS Sbjct: 370 KVWVS 374 >gi|302748887|gb|ADL63923.1| ribosomal protein S3 [Morella cerifera] Length = 499 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 9/170 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 E ++ + G+ ++ I + + G +++K+R LSN T + Sbjct: 328 ELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTKTN 384 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ S Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFELRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCS 444 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 GRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494 >gi|302306412|ref|NP_982809.2| ABL138Wp [Ashbya gossypii ATCC 10895] gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895] Length = 244 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 16/212 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V + ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQGVLGI 184 Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKDS 227 KV + + ++D+ Sbjct: 185 KVKIMKDPSKSRTGPKALPDAVKILEPKDEDA 216 >gi|255637340|gb|ACU19000.1| unknown [Glycine max] Length = 236 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID+ G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQGVLGIKVKIML 190 >gi|302748661|gb|ADL63811.1| ribosomal protein S3 [Clusia rosea] Length = 393 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + + I + + G +++K+R +SN T Sbjct: 218 KVMELIEKFINLGLIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRT 274 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ +L +R FR + + V+ M+ G +G+++ Sbjct: 275 KTNTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSILSQIVKDILFVMKKGLEGIRI 334 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GA+++RTEC G+ IDY A T YG G+KV++S Sbjct: 335 CCSGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 387 >gi|302748875|gb|ADL63917.1| ribosomal protein S3 [Menispermum canadense] Length = 479 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 311 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 479 >gi|272716582|gb|ACZ95586.1| ribosomal protein S3 [Libocedrus yateensis] Length = 626 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624 >gi|254580157|ref|XP_002496064.1| ZYRO0C09636p [Zygosaccharomyces rouxii] gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii] Length = 246 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 21/213 (9%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + T II+ + R ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLGEGGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V + ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + ID T G GI Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQGVLGI 184 Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223 KV + + + D+ + + E + Sbjct: 185 KVKIMRDPATTPSGPNALPDAVTIVDPKEEEPI 217 >gi|302748617|gb|ADL63789.1| ribosomal protein S3 [Canella winterana] Length = 483 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 315 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|272716540|gb|ACZ95555.1| ribosomal protein S3 [Pilgerodendron uviferum] Length = 626 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624 >gi|302749075|gb|ADL64017.1| ribosomal protein S3 [Tasmannia insipida] Length = 484 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 315 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 484 >gi|302748557|gb|ADL63759.1| ribosomal protein S3 [Aristolochia macrophylla] Length = 478 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++KIR L N +N+ Sbjct: 310 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLYNFSNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY + T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASTEVSTRYGISGVKVRIS 478 >gi|272716606|gb|ACZ95604.1| ribosomal protein S3 [Callitris rhomboidea] Length = 647 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 494 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 553 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V++ R G G+++ GRL GAE++RTEC G+ Sbjct: 554 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 613 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 614 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 645 >gi|288191192|gb|ADC43949.1| ribosomal protein S3 [Ixonanthes reticulata] Length = 499 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 324 KVMELIEKFINLGKIGEL-IKGIEMMIEIILRNRRILYGYNSYLNEMKKMRSLLSNRTNT 382 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 383 NTLIESVKMKSVYQSASPIAQDISFQLRNKIRSFRSIFSKIVKDIPLVMKKGVEGIRICC 442 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ I Y A T YG G+KV++S Sbjct: 443 SGRSKGAEIARTECGKYGKTSRNVFNQKIYYAPAEVSTRYGISGVKVWISY 493 >gi|302748762|gb|ADL63861.1| ribosomal protein S3 [Gomortega keule] Length = 477 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 7/171 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 309 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+ IAQ I+ Q R +F + +K + M G +G+++ Sbjct: 368 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFCKIVKD-IPIVMPKGVEGIRIC 426 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 477 >gi|302748641|gb|ADL63801.1| ribosomal protein S3 [Chloranthus multistachys] Length = 478 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIPLVMQKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302749103|gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides] Length = 478 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748713|gb|ADL63837.1| ribosomal protein S3 [Drimys winteri] Length = 478 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+L+ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMEFLEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748727|gb|ADL63844.1| ribosomal protein S3 [Escallonia rubra] Length = 498 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 6/145 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q Sbjct: 350 IEIILRKRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 409 Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ Sbjct: 410 PRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISCSGRLEGAEIARTECGKYGKTSRNVFN 469 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 IDY A T YG G+KV++S Sbjct: 470 QKIDYAPAEVSTRYGISGVKVWISY 494 >gi|328541328|gb|AEB21888.1| ribosomal protein S3 [Lepidozia ulothrix] Length = 375 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+ S Sbjct: 370 KVWXSY 375 >gi|272716528|gb|ACZ95546.1| ribosomal protein S3 [Austrocedrus chilensis] Length = 654 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 501 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 560 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 561 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 620 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 621 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 652 >gi|272716544|gb|ACZ95558.1| ribosomal protein S3 [Libocedrus bidwillii] Length = 626 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624 >gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus] Length = 246 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DSTIPAAEHRVVEKDS 227 +++S Sbjct: 202 KPLPDHVSIVEPKEES 217 >gi|302748625|gb|ADL63793.1| ribosomal protein S3 [Carludovica palmata] Length = 479 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 10/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSFLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSAMRFGA----DGVK 150 N+ + ++ +A+LIAQ I+ Q FR + V+ +G++ Sbjct: 367 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPSANTGLAVEGIR 426 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 + SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 ICCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 479 >gi|272716602|gb|ACZ95601.1| ribosomal protein S3 [Widdringtonia nodiflora] Length = 641 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 488 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKYVYQSASPIAQDI 547 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V++ R G G+++ GRL GAE++RTEC G+ Sbjct: 548 SFQLRGGKRSFRSIFFQIVRNLPLVMPQLRKGVGGIRICRPGRLKGAEIARTECREYGKP 607 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 608 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 639 >gi|302748559|gb|ADL63760.1| ribosomal protein S3 [Ascarina sp. Thien 500] Length = 483 Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 314 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 370 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 371 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIPLVMPKGVEGIRI 430 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 431 CCSGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 483 >gi|302748822|gb|ADL63891.1| ribosomal protein S3 [Iris sp. Qiu 95091] Length = 476 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYRDNSYLKEVQKMRSFLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSAMRFGA--DGVKVIAS 154 + ++ +A+LIAQ I+ Q +++ FR + ++ R G+++ S Sbjct: 367 NTLIESVKIKSVYQSASLIAQDISFQPRKKKRSFRSIFSKLLKDIPRRPKVVGGIRICCS 426 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 GRSRGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISF 476 >gi|130076564|gb|ABO31940.1| ribosomal protein S3 [Corylopsis glabrescens f. gotoana] Length = 480 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 L+ +D I E ++ + G+ ++ I + + + G +++K+R Sbjct: 301 KLMGKDKVI-ELIEKLINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNFYLNEVKKMR 356 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRF 144 LSN TN+ + ++ +A+ IAQ I+ + +R FR + V+ M+ Sbjct: 357 SLLSNRTNAITLIESVKIKSVYQSASTIAQDISLKPRNKRRSFRSIFSKIVKDIPLVMKK 416 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 417 GVGGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 476 >gi|130076572|gb|ABO31944.1| ribosomal protein S3 [Hamamelis mollis] Length = 485 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 10/179 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 L+ +D I E ++ + G+ ++ I + + + G +++K+R Sbjct: 311 KLMGKDKVI-ELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNFYLNEVKKMR 366 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRF 144 LSN TN+ + ++ +A+ IAQ I+ + +R FR + V+ M+ Sbjct: 367 SLLSNRTNANTLIESVKIKSVYQSASTIAQDISLKPRNKRRSFRSIFSKIVKDIPLVMKK 426 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 427 GVGGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 485 >gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4] gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4] gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3 (Eurofung) [Aspergillus nidulans FGSC A4] Length = 264 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 16/206 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRI-IVYSARPGLIIGKKGT 82 A G Y L E+ Q L + G + + + T I ++ G++ Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDISTTHTQEVLGEQGRRIR 68 Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 ++ + +K + + L +V ++A +S+ +L + RRA ++ M Sbjct: 69 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 128 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200 GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV Sbjct: 129 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 187 Query: 201 YVSLRDEVSDSDSTIPAAEHRVVEKD 226 + SD A + + Sbjct: 188 KIMRG-----SDPEGKAGPQKTLPDS 208 >gi|302748935|gb|ADL63947.1| ribosomal protein S3 [Peltanthera floribunda] Length = 475 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V++ M+ +G+++ Sbjct: 369 NTLMESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKWVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKV 475 >gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R] gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R] Length = 262 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 ++ L + G + + TH II+ + ++G+KG I ++ +K + Sbjct: 23 DFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 A +++ + +G + Q +DY G GIKV + +V Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKVKIMKGWDPEGQVGPR 201 Query: 212 DSTIPAAE 219 + + Sbjct: 202 KPLPDSVQ 209 >gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays] gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays] gi|223947389|gb|ACN27778.1| unknown [Zea mays] gi|223972753|gb|ACN30564.1| unknown [Zea mays] Length = 229 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 10/179 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRYVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210 A+ +++ + +G + Q + +ID G GIKV + L + +V Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200 >gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus] Length = 248 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + I T II+ + R ++G+KG I ++ +K + Sbjct: 23 EFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFKFPDG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + +DY T G GIKV + D T Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGEPCVDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPT 195 Query: 215 IPAAEHRVVE 224 + + Sbjct: 196 GKNGPKKPLP 205 >gi|302749033|gb|ADL63996.1| ribosomal protein S3 [Siparuna brasiliensis] Length = 476 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 5/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIKMMIEIILRNRRIPYGYNYYLNEVQKIRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154 + + ++ +A+ IAQ I+ Q R FR + V+ M G +G+++ S Sbjct: 369 DTFIESVKIKSVYQSASPIAQDISFQPRTRS-FRSIFSQIVKDIPIVMPKGVEGIRICCS 427 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 428 GRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476 >gi|302748599|gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens] Length = 478 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + + G +++K+R LSN T Sbjct: 310 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + RA+ + + M+ G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRAIFSKIVKDIPLVMQKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor] gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor] Length = 228 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 10/179 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210 A+ +++ + +G + Q + +ID G GIKV + L + +V Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200 >gi|302748772|gb|ADL63866.1| ribosomal protein S3 [Gyrocarpus sp. Chase 317] Length = 478 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++KIR LSN T Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKIRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRA---VQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q ++ FR + +Q M G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRKKPRSFRSIFSKIVKDIQLVMPKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RT C G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSGGAEIARTFCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca] Length = 233 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 227 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211 A+ +++ + +G + Q + +ID G GIKV + L + ++ + Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPT 201 Query: 212 DSTIPAAEHRVVEKD 226 +++ Sbjct: 202 TPLPDLVTIHPPKEE 216 >gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa Japonica Group] Length = 205 Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98 L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLR 120 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDSD 212 A+ +++ + +G + Q + +ID G GIKV + L + +V + Sbjct: 121 -AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTT 179 Query: 213 STIPAAEHRVVEKD 226 +++ Sbjct: 180 PLPDLVTIHAPKEE 193 >gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group] gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group] gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa Japonica Group] gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group] gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group] gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group] gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group] gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group] Length = 228 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211 A+ +++ + +G + Q + +ID G GIKV + L + +V + Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPT 201 Query: 212 DSTIPAAEHRVVEKD 226 +++ Sbjct: 202 TPLPDLVTIHAPKEE 216 >gi|328541192|gb|AEB21820.1| ribosomal protein S3 [Telaranea trilobata] Length = 375 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+ S Sbjct: 370 KVWXSY 375 >gi|302748768|gb|ADL63864.1| ribosomal protein S3 [Guaiacum officinale] Length = 470 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 8/168 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ ++ R I + + G +++K+R LSN T Sbjct: 306 KVMEFIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKT 362 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152 + + ++ +A+ IAQ I+ +L FR + +A+ M+ +G+++ Sbjct: 363 KTNTLIESVKIKSVYQSASPIAQDISLKLRNTRSFRSILSQIVKAIPLGMKKRVEGIRIC 422 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 423 CSGRLEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKV 470 >gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa] Length = 211 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + I T +I+ + R ++G++G I ++ +K + Sbjct: 13 EFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELTSVIQKRFDFPEG 72 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 NVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQGVLGIKVKIMRPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7] gi|27734524|sp|Q975I7|RS3_SULTO RecName: Full=30S ribosomal protein S3P gi|15621418|dbj|BAB65413.1| 225aa long hypothetical 30S ribosomal protein S3 [Sulfolobus tokodaii str. 7] Length = 225 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 4/186 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 + + EYL A A + I +T R+I+Y+ RP LIIGK G I+++ + L Sbjct: 16 VMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIKQLAQMLERYFG 75 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 ++V V PE+NA ++A +A LE+ FRRA ++ M GA G +VI SG Sbjct: 76 LDNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMNAGALGAEVIISG 135 Query: 156 RLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L +E ++ E EG V L +D A+A G G+++ ++ + D Sbjct: 136 KLT-SERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILITKPMKSVDKIE 194 Query: 214 TIPAAE 219 + Sbjct: 195 LREQPK 200 >gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 192 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 12 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 64 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 65 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 125 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 183 Query: 199 KVYVSL 204 KV + Sbjct: 184 KVKIMR 189 >gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis] Length = 245 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DSTIPAAEHRVVEKDS 227 +++S Sbjct: 202 KPLPDHVSIVEPKEES 217 >gi|302748983|gb|ADL63971.1| ribosomal protein S3 [Quillaja saponaria] Length = 449 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + + G +++K+R LSN T Sbjct: 281 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 337 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ +L ++R FR + V+ M+ G +G+++ Sbjct: 338 NTNTLIESVKIKSVYQSASPIAQDISFKLRKKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 397 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY +A T YG G+KV +S Sbjct: 398 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVXIS 449 >gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii] gi|75061590|sp|Q5R465|RS3_PONAB RecName: Full=40S ribosomal protein S3 gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii] gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens] Length = 243 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L EV + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|272716634|gb|ACZ95625.1| ribosomal protein S3 [Glyptostrobus pensilis] Length = 607 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 454 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 513 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 514 SFQLRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 573 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 574 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 605 >gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor] Length = 250 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + I T II+ + + ++G+KG I ++ + Sbjct: 23 EFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLGEKGRRIRELTAVVQKRFGFAPG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + A++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQGVLGIKVKIMLPYDPNGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748973|gb|ADL63966.1| ribosomal protein S3 [Polygonum sp. Qiu 94110] Length = 474 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 309 KVMKLIEKLIDLGGIEEL-IKGIEMMIEIILKNRRIPYGYNFYLNEVKKMRSLLSNRTKT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ R FR ++ V+ M+ G +G+++ Sbjct: 368 NTLMESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFRKIVKDIPLGMKNGIEGIRICC 427 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ IDY +A T YG G+KV Sbjct: 428 SGRLAGAEIARTECGKYGKTSCNVFNKKIDYASAEVSTRYGILGVKV 474 >gi|302749081|gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense] Length = 478 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ I + + + G +++K+R LSN T Sbjct: 310 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|302748521|gb|ADL63741.1| ribosomal protein S3 [Agave attenuata] Length = 481 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 9/173 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + R I + + G +++K+R LS T Sbjct: 312 KVMELIEKFIDLDSTGEF---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSERT 368 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151 N+E + ++ +A+LIAQ I+ Q FR + V+ M G +G+++ Sbjct: 369 NTETLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSVFSKIVKDIPLIMPKGVEGIRI 428 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 429 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481 >gi|272716556|gb|ACZ95567.1| ribosomal protein S3 [Amentotaxus argotaenia] Length = 713 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 6/149 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 565 GMMIGIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDI 624 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + QL FR R V+ M G G+++ GRL GAE++RTEC G+ Sbjct: 625 SSQLRDGTRSFRSIFGRIVRDIPLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCN 684 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 R IDY A T YG G+KV++ Sbjct: 685 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 713 >gi|113170485|ref|YP_717276.1| Rps3 [Ostreococcus tauri] gi|112806892|emb|CAL36398.1| unnamed protein product [Ostreococcus tauri] Length = 277 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 67/167 (40%), Gaps = 2/167 (1%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E L+ L + + ++++ ++ K + + Sbjct: 112 ETLKKKLVFQSLLRNNLQKSTTLHLTNLFEQTRHKTNALKFYA-NHLEAVSQQYFKTATQ 170 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNG 159 ++ + +A +A+ ++ LER+ ++ +G K+ SGRL G Sbjct: 171 WEPVKLQEFTKSAQFVAEYVSHALERQKPVKQIFSSVQTLLKKDPNVEGFKISCSGRLQG 230 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 E+++ E + G++ L + +DY A A T +G G+KV++ +D Sbjct: 231 VEMAKIETFKFGKISLHVFTSKVDYAEARALTTFGILGVKVWICYKD 277 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 20/150 (13%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV--AKILIE 58 MGQKI+P+ RL N ++ + W+++ Y +H+ L+++ +L Q G K + Sbjct: 1 MGQKISPVALRLQTNKSFQASWYSQ-KLYAEGVHKQLQVQNFLHDVFHQVGTKATKTHVV 59 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA- 117 +T +I + P L + + L + + Sbjct: 60 QTPGALKIHTFFCSPRLF--------------DQKLAKKTMSLKPTHFFQHQRTTQWQFL 105 Query: 118 --QSIAQQLERRVVFRRAMKRAVQSAMRFG 145 Q + L++++VF+ ++ +Q + Sbjct: 106 SNQMHWETLKKKLVFQSLLRNNLQKSTTLH 135 >gi|302748850|gb|ADL63905.1| ribosomal protein S3 [Liriodendron chinense] Length = 454 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + + I+ II+ + R +++KIR LSN TN+ Sbjct: 286 KVMELIEKFIDLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 344 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M G +G+++ Sbjct: 345 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIQLVMPKGVEGIRICC 404 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 405 SGRSEGAEIARTKCGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 454 >gi|302748743|gb|ADL63852.1| ribosomal protein S3 [Gaiadendron sp. Munoz et al. 102] Length = 468 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 303 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLSNRTNT 361 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 362 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDILLVMKKGVEGIRICC 421 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 422 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 468 >gi|272716614|gb|ACZ95610.1| ribosomal protein S3 [Callitris macleayana] Length = 632 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 479 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 538 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V++ R G G+++ GRL GAE++RTEC G+ Sbjct: 539 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 598 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 599 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 630 >gi|25987150|gb|AAN75747.1|AF319171_2 ribosomal protein S3 [Magnolia x soulangeana] Length = 523 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 350 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 408 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ Sbjct: 409 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 468 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 469 SGRSEGAEIARTKCGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISY 519 Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL +N + + F+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I K I + Sbjct: 60 CIILHFPKRTFIHFF 74 >gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130] gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130] Length = 258 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+ L + G + + TH II+ + ++G+KG I ++ +K + Sbjct: 23 EFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 A +++ + +G + Q +DY G GIKV + ++ Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQGVLGIKVKIMKGYDREGQLGPR 201 Query: 212 DSTIPAAE 219 + + Sbjct: 202 KPLPDSVQ 209 >gi|296040600|gb|ADG85268.1| ribosomal protein S3 [Silene latifolia] Length = 432 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 7/172 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 259 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYSSYLNEVQKMRSLLSNRTKT 317 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+LIAQ I+ QL+ + F + +K+ + M+ G +G+++ Sbjct: 318 NTLIESVKITSVYQSASLIAQDISFQLKNQSREFSSIFSKIVKK-IPLVMKKGIEGIRIC 376 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S Sbjct: 377 CSGRLQGAEIARTECGKYGKTSCNVLHQKRDYASALVSTRYGIVGVKVWISY 428 >gi|302748531|gb|ADL63746.1| ribosomal protein S3 [Alnus incana subsp. rugosa] Length = 499 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 9/170 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 E ++ + G+ ++ I + + G +++K+R LSN T + Sbjct: 328 ELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTKTN 384 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIAS 154 + ++ +A+ IAQ I+ +L + FR + + + M+ G +G+++ S Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFELRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICCS 444 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 445 GRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494 >gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 188 Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T +I+ + R ++G+ G Sbjct: 8 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A ++ + +G + Q + ID T G GI Sbjct: 121 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 179 Query: 199 KVYVSL 204 KV + Sbjct: 180 KVKIMR 185 >gi|272716536|gb|ACZ95552.1| ribosomal protein S3 [Fitzroya cupressoides] Length = 639 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 486 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 545 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 546 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 605 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 606 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 637 >gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis] gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis] Length = 234 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K N ++ + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|194212272|ref|XP_001917735.1| PREDICTED: similar to 40S ribosomal protein S3 [Equus caballus] Length = 243 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V K + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFTMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus] Length = 223 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 12/194 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVS---LRDEVSDSD 212 G + +++ +++G + + ++D G GIKV + +DE+ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIIIVEPKDEILP-- 199 Query: 213 STIPAAEHRVVEKD 226 T P +E + + + Sbjct: 200 -TTPISEQKGGKPE 212 >gi|302749113|gb|ADL64036.1| ribosomal protein S3 [Viola sp. Qiu 95018] Length = 508 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++ Sbjct: 385 NTLIESVKIQSIYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RT+C G+ IDY A T YG G+KV++S Sbjct: 445 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|288191257|gb|ADC43981.1| ribosomal protein S3 [Hybanthus concolor] Length = 501 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + + I+ II+ + R +++K+R LSN TN+ Sbjct: 326 KVMELIEKFINLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 384 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + + M+ +G+++ Sbjct: 385 NTLIESVKIQSVYQSASLIAQEISFQLRNKKGSFRSIFSKIEKDIPLVMKKEVEGIRICC 444 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RT+C G+ IDY A T YG G+KV++S Sbjct: 445 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 495 >gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens] Length = 231 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 18/202 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G A + + T II+ + R ++G+KG Sbjct: 12 ADGLFYAEL-------NELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQR 64 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + + L V + A A+S+ +L + RRA V+ Sbjct: 65 IRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRF 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+V+ SG+L A+ ++ + +G + + R ++D G G+ Sbjct: 125 VMESGAKGVEVVVSGKLR-AQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGV 183 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + D++ Sbjct: 184 KVSIM-----LPHDASGKTGPK 200 >gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1] Length = 252 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNS 97 E L + G A + I++T K+ I++ + R ++G+KG I + +K Sbjct: 24 ELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKD 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 E+ L +V + A +++ +L + RRA V+ M GA G +VI SG+L Sbjct: 84 EVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A+ ++ + +G + R +ID G GIKV + D + Sbjct: 144 R-AQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIM-----LPHDPSG 197 Query: 216 PAAEHRVVE 224 + Sbjct: 198 KTGPKAPLP 206 >gi|302748911|gb|ADL63935.1| ribosomal protein S3 [Nyssa sylvatica] Length = 473 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 473 >gi|302749119|gb|ADL64039.1| ribosomal protein S3 [Xanthorrhoea quadrangulata] Length = 474 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 6/171 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + + II+ + R +++K+R LSN TN+ Sbjct: 303 KVMELIEKFIDLGGIG--EFIKGIEMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTNT 360 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+LI Q I+ Q FR + V+ M G +G+++ Sbjct: 361 NTLMESVKIKSVYQSASLIVQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 420 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ I+Y A T YG G+KV +S Sbjct: 421 SGRLGGAEIARTECGKYGKTSRNVFHHKINYAPAEVSTRYGISGVKVRISY 471 >gi|1542890|emb|CAA45192.1| ribosomal protein S3 [Brassica napus] Length = 530 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 LL +D K+ E ++ G+ ++ + I + + G+ G +++K+R Sbjct: 343 NLLGKD-KVMELIEKFKDLGGIEEL---IKVIDMMIEIILRKRGIPYGYNSYFNEVQKMR 398 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGAD 147 LSN TN++ + ++ +A+LIAQ I+ QL+ +R F + V+ + + Sbjct: 399 SFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPKR-VE 457 Query: 148 GVKVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 G+++ SGRL AE ++T+CY + IDY A T YG G+KV++S Sbjct: 458 GIRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQ 517 Query: 207 EVSDS 211 + Sbjct: 518 KKGGR 522 >gi|272716524|gb|ACZ95543.1| ribosomal protein S3 [Actinostrobus pyramidalis] Length = 646 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 493 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 552 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 553 SFQLRDGTRSFRSIFFQIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 612 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 613 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 644 >gi|302748953|gb|ADL63956.1| ribosomal protein S3 [Phyllonoma laticuspis] Length = 487 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91 L E KI E ++ + G+ ++ I+ II+ +++K+R L Sbjct: 315 NLMEKDKIMELIEKFIDLGGIGEL-IKGIEMMIEIILRKIIIPYGYNSYLNEVKKMRSLL 373 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147 SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G + Sbjct: 374 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVE 433 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 G+++ SGR GAE++RTEC G+ IDY A T YG G+KV+ Sbjct: 434 GIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 487 >gi|328541258|gb|AEB21853.1| ribosomal protein S3 [Acromastigum filum] Length = 373 Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYV 202 KV+V Sbjct: 370 KVWV 373 >gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae] Length = 211 Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|302749099|gb|ADL64029.1| ribosomal protein S3 [Trimenia moorei] Length = 500 Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 332 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 390 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + M G +G+++ Sbjct: 391 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDISLVMPKGVEGIRICC 450 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 451 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 500 >gi|288191259|gb|ADC43982.1| ribosomal protein S3 [Rinorea bengalensis] Length = 471 Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TNS Sbjct: 296 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNS 354 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++ Sbjct: 355 NTLIESVKIQSVYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 414 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RT+C G+ IDY A T YG G+KV++S Sbjct: 415 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGIPGVKVWISY 465 >gi|254739513|ref|ZP_05197210.1| 30S ribosomal protein S3 [Bacillus anthracis str. Kruger B] Length = 65 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ I R Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIGRA 59 Query: 61 HKNCRI 66 + Sbjct: 60 ANRVNV 65 >gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] Length = 250 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ +++G + Q + +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|302748947|gb|ADL63953.1| ribosomal protein S3 [Phelline comosa] Length = 483 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 313 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRGYNFYLN---EVKKMRSLLSNRTKT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479 >gi|272716610|gb|ACZ95607.1| ribosomal protein S3 [Callitris columellaris] Length = 656 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 503 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 562 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + V++ R G G+++ GRL GAE++RTEC G+ Sbjct: 563 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 622 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 623 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 654 >gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa] Length = 233 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|302749045|gb|ADL64002.1| ribosomal protein S3 [Spinacia oleracea] Length = 472 Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 6/174 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D I + ++ + G+ + LI+ II+ + R +++K+R Sbjct: 301 NLLGKDKVI-KLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSL 358 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G Sbjct: 359 LSNRTNTNTLIESVKIKSVYQSASSIAQDISFQPKKKRGSFRSIFSKIVKKIPLVMKKGV 418 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 +G+++ SGRL GAE++RTEC G+ L IDY +A T YG G+KV Sbjct: 419 EGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKV 472 >gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis] Length = 243 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N ++ Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFNFIDN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ++D T G GIKV + D Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPFDPAG 196 Query: 216 PAAEHRVVE 224 + + Sbjct: 197 KQGPKKPLP 205 >gi|302748527|gb|ADL63744.1| ribosomal protein S3 [Alisma plantago-aquatica] Length = 466 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ ++ G LI+ II+ + +++K+R LS T + Sbjct: 296 KVMELIEK-CREPGSTGELIKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSFLSERTKT 354 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 E + ++ +A+ IAQ I+ Q +R FR + + + S G +G+ + Sbjct: 355 ETSIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSHIVKDISSRRTKGVEGICICC 414 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 SGR GAE+SRTEC G+ L IDY +A T YG G+KV++S R Sbjct: 415 SGRSKGAEISRTECGKYGKTSRNVLEQKIDYASAEVSTRYGISGVKVWISYR 466 >gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa] gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa] gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa] gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa] Length = 236 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula] Length = 211 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 13 EFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 RVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|328541252|gb|AEB21850.1| ribosomal protein S3 [Acromastigum cavifolium] Length = 374 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 370 Query: 199 KVYV 202 KV+V Sbjct: 371 KVWV 374 >gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi] Length = 278 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 58 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFGFAPG 117 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 118 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 177 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 178 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 236 Query: 212 DST 214 Sbjct: 237 KPL 239 >gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 207 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 L I ++L L +AG +++ I++T RI VY PG +IG+ G I+ + + + + N Sbjct: 15 LNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAIDDLTETIKSRFN 74 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + +SV EV I L+A+ IA +LER + R+ ++ ++S M GA G ++I SG Sbjct: 75 VNNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIMENGALGAEIIISG 134 Query: 156 RLNGA-ELSRTECYLEGRVPLQTLRAH-IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L +++ G +P + ++ G A A YG+ G+ V + V Sbjct: 135 KLAAKGARAKSIRKSVGYIPKAGDVINLVNKGVATAYPKYGAIGVVVRIVPPGTVFPDRE 194 Query: 214 TIPAAEHRVV 223 R + Sbjct: 195 IKKVEIPRSI 204 >gi|9653234|ref|NP_062480.1| ribosomal protein S3 [Chondrus crispus] gi|1351020|sp|P48938|RT03_CHOCR RecName: Full=Ribosomal protein S3, mitochondrial gi|1334481|emb|CAA87601.1| ribosomal protein S3 [Chondrus crispus] Length = 240 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 95/226 (42%), Gaps = 22/226 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRW--FARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILI 57 M QKINPI FRLG WNS + + Y ++++ L ++ ++ ++K G Sbjct: 1 MAQKINPISFRLGTTQVWNSTLQIYGKSFKNYFSIVNNQLNLQNFIIRYVKLNGFQINYY 60 Query: 58 -ERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115 + HKN + P GK T+ +++ LSN +++ K + + Sbjct: 61 EWKMHKNKTFLSIYFSPSFNNGKLNLTNFKQLSNLLSNWCSNKFIFHFYLNSKWSLTSNF 120 Query: 116 IAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGAD---------GVKVIASGRLNG 159 + +E+++ ++ + + + S+ G K+ GR + Sbjct: 121 LTLYTKYLVEQKLGPKKIIVILCNFLQDQLNSSKVMHFKFGFIETKLVGFKIRLVGRFDS 180 Query: 160 A-ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + +++++ G + L L + ++Y T G+CG++V++ Sbjct: 181 SNQMAKSFDQTIGTLSLTNLSSFVEYSNIEIHTKLGTCGVQVWLFF 226 >gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3 (RPS3A) [Arabidopsis thaliana] gi|75206146|sp|Q9SIP7|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis thaliana] gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain [Arabidopsis thaliana] gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana] gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana] gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis thaliana] gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana] gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana] Length = 250 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|272716521|gb|ACZ95541.1| ribosomal protein S3 [Pseudotaxus chienii] Length = 541 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113 ++I KN RI ++ K+R LS TN + ++ +A Sbjct: 393 GMMIGVIPKNRRI-------PYGYDYYSNEVRKMRPLLSGGTNVNTSIGSVKIESVYQSA 445 Query: 114 TLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYL 169 + IAQ I+ QL FR R V+ M G G+++ GRL GAE++RTEC Sbjct: 446 SPIAQDISFQLRDGTRSFRSIFGRIVRDIPLIMPKGVGGIRICCPGRLKGAEIARTECRE 505 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G+ R IDY A T YG G+KV++ Sbjct: 506 YGKTSCNAFRHQIDYAYAKVSTRYGILGVKVWIPFP 541 Score = 35.4 bits (80), Expect = 6.4, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 17/80 (21%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLH-----EDLKIREYL------QCHLKQ 49 M +K+NPI RL +N + + S + H +D+ REY Sbjct: 1 MARKVNPISVRLHLNRS------SDPSRFSDYYHGKPMYQDVNPREYFGSIRPPTRETFG 54 Query: 50 AGVAKILIERTHKNCRIIVY 69 + + + + K I ++ Sbjct: 55 FRLGRCIPHHSPKRTFIHLF 74 >gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DSTIPAAEHRVVEKDS 227 ++++ Sbjct: 202 KPLPDHVSIVEPKEET 217 >gi|302749007|gb|ADL63983.1| ribosomal protein S3 [Santalum album] Length = 473 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + G+ G +++K+R LSN T Sbjct: 308 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 425 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 473 >gi|302748739|gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra] Length = 483 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 315 KVMELIEKFIDLGGIGE---WIKGIEMMIEIILRNRRIPDGDNFYLNEVKKMRSLLSNRT 371 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 431 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 432 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483 >gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DSTIPAAEHRVVEKDS 227 ++++ Sbjct: 202 KPLPDHVSIVEPKEET 217 >gi|302748737|gb|ADL63849.1| ribosomal protein S3 [Eupomatia bennettii] Length = 454 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 285 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 343 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 E + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ Sbjct: 344 ETLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 403 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 404 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 454 >gi|255637525|gb|ACU19089.1| unknown [Glycine max] Length = 239 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ ++ + +G + Q ++ +ID+ G GIKV + L Sbjct: 143 R-AQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQGVFGIKVKIML 190 >gi|302748858|gb|ADL63909.1| ribosomal protein S3 [Magnolia tripetala] Length = 455 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R ++ KIR LSN TN+ Sbjct: 286 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVHKIRSLLSNRTNT 344 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ Sbjct: 345 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 404 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 405 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 455 >gi|302748731|gb|ADL63846.1| ribosomal protein S3 [Eucommia ulmoides] Length = 461 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 296 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 354 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ Q + FR M + V+ M+ G +G+++ Sbjct: 355 HTNIESVKIQSVYQSASPIAQDISFQPRNKTRSFRSIMSQIVKEIPLVMKKGVEGIRICC 414 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ +DY A T YG G+KV Sbjct: 415 SGRLEGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYGILGVKV 461 >gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar] gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa] gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa] gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa] Length = 234 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748545|gb|ADL63753.1| ribosomal protein S3 [Annona muricata] Length = 429 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 14/170 (8%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E++ + + G+ I I + +++KIR LSN T + Sbjct: 270 KVMEFIDKFIDRIGIKGIEI----------ILRRGIPYRYNSYLNEVQKIRSLLSNRTKT 319 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M G +G+++ Sbjct: 320 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVRDMKLVMPKGVEGIRICC 379 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 380 SGRSKGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 429 >gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix] Length = 245 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus] Length = 277 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] Length = 1596 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 20/213 (9%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 1379 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 1431 Query: 84 IEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + N + L +V + A A+S+ +L + RRA ++ Sbjct: 1432 IRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACYGVLRF 1491 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + + +ID G GI Sbjct: 1492 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQGVLGI 1550 Query: 199 KVYVS-------LRDEVSDSDSTIPAAEHRVVE 224 KV + R + + E + E Sbjct: 1551 KVKIMKDWDPTGKRGPRTPLPDVVKVLEPKEEE 1583 >gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio] Length = 245 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays] Length = 228 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 10/179 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA+G +VI SG+L Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAEGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210 A+ +++ + +G + Q + +ID G GIKV + L + +V Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200 >gi|3248940|gb|AAD09929.1| 30S ribosomal protein S3 [Coxiella burnetii] Length = 74 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 45/67 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IERT Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERT 60 Query: 61 HKNCRII 67 +N +II Sbjct: 61 ARNAKII 67 >gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis] Length = 241 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFNFPEH 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ++D T G GIKV + D Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPNG 196 Query: 216 PAAEHRVVE 224 R + Sbjct: 197 KTGPKRPLP 205 >gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar] gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar] Length = 245 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis] gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis] Length = 238 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLGDKGKRIRELTSVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D T G GIKV + LR +V Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQGVLGIKVKIMLRCDPNGKVGPK 201 Query: 212 DSTIPAAEHRVVEKD 226 E +++ Sbjct: 202 KPLPDCVEVPGPKEE 216 >gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct] Length = 244 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456] gi|152060866|sp|A2BMC5|RS3_HYPBU RecName: Full=30S ribosomal protein S3P gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456] Length = 247 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 +I EYL +AG A + I + R+I+Y+ RP +IIG++G I ++ + Sbjct: 17 QIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIRQLAAIFEHEFGL 76 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 S ++V V P++NA ++A IA LER +RR + + GA GV+++ SG+ Sbjct: 77 SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNAGAIGVQIVISGK 136 Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L E +R E G+V + +D G GI+V + Sbjct: 137 LR-TERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVMIVKP-AKPSDYVR 194 Query: 215 IPAAEH 220 I E Sbjct: 195 IKQPEE 200 >gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens] Length = 243 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302749071|gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri] Length = 478 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++KIR LSN T Sbjct: 310 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILKNRIIPYGYNSYLNEVQKIRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478 >gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus] Length = 245 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus] Length = 243 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|13097759|gb|AAH03577.1|AAH03577 Unknown (protein for IMAGE:3544292) [Homo sapiens] gi|15341992|gb|AAH13196.1|AAH13196 Unknown (protein for IMAGE:4347401) [Homo sapiens] Length = 242 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 22 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 142 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 200 Query: 212 DST 214 Sbjct: 201 KPL 203 >gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728] gi|27734534|sp|Q9HIR5|RS3_THEAC RecName: Full=30S ribosomal protein S3P gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum] Length = 225 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 4/174 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI- 99 EY+ + AG ++++RT I +Y RPGL+IG++G+ ++++ L E Sbjct: 18 EYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKVQQMTDTLEKKYGIETP 77 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + V +V P++N ++IA+ IA LE+ +R+A ++ ++ GA GV + SG+++G Sbjct: 78 QIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISG 137 Query: 160 AELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 E +R + ++ G V + + G + A+ G G+ V + + Sbjct: 138 -ERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKILNPEYKLPD 190 >gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio] gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio] gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio] Length = 245 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 GVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa] Length = 232 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera] Length = 235 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGKRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|255641130|gb|ACU20843.1| unknown [Glycine max] Length = 236 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|302748814|gb|ADL63887.1| ribosomal protein S3 [Ilex sp. Qiu 94038] Length = 475 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 5/173 (2%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91 L E K+ E ++ + G+ ++ I+ II+ + R +++K+R L Sbjct: 304 NLMEKDKVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 362 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147 SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G + Sbjct: 363 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVE 422 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G+++ SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 423 GIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKV 475 >gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar] gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar] Length = 245 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEC 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron japonicum] Length = 240 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVIQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGVLGIKVKIMLPWDTTGKMGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus] gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus] gi|57102362|ref|XP_534008.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 1 [Canis familiaris] gi|73987935|ref|XP_849947.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 3 [Canis familiaris] gi|73987937|ref|XP_860278.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 4 [Canis familiaris] gi|149719291|ref|XP_001494894.1| PREDICTED: similar to 40S ribosomal protein S3 [Equus caballus] gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus] gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca] gi|51703302|sp|P62909|RS3_RAT RecName: Full=40S ribosomal protein S3 gi|51703309|sp|P62908|RS3_MOUSE RecName: Full=40S ribosomal protein S3 gi|325530283|sp|E2RH47|RS3_CANFA RecName: Full=40S ribosomal protein S3 gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus] gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus] gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus] gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus] gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus] gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus] gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus] gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus] gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus] gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus] gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus] gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus] gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus] gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus] gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus] gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus] gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus] gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus] gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus] gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus] gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus] gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca] gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca] Length = 243 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|328541236|gb|AEB21842.1| ribosomal protein S3 [Pseudocephalozia lepidozioides] Length = 375 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISCKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KVYVSL 204 KV+ S Sbjct: 370 KVWXSY 375 >gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis] gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis] Length = 233 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q + +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKVKIML 190 >gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus] Length = 243 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 10/187 (5%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 +++ E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 19 VELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG 78 Query: 97 ---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 + L +V + A A+S+ +L + RRA ++ M GA G KV+ Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVV 138 Query: 154 SGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DE 207 SG+L G + +++ +++G + + ++D G GIKV + L + Sbjct: 139 SGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGK 197 Query: 208 VSDSDST 214 + Sbjct: 198 IGPKKPL 204 >gi|225442156|ref|XP_002275541.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera] Length = 234 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens] gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens] Length = 228 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98 +L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 24 NFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGEKGRRIRELMSLIQKRFNFPED 83 Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + + +V + A +S+ +L + RRA ++ M GA G +++ SG+L Sbjct: 84 SVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEIVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + T + +DY G GIKV + +D T Sbjct: 144 RG-QRAKSMKFVDGLM-IHTGQPCVDYVDTAIRHVYLRQGVLGIKVKIM-----LPTDPT 196 Query: 215 IPAAEHRVVE 224 + + + Sbjct: 197 GKSGPKKPLP 206 >gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 [Homo sapiens] gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus] gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa] gi|293331917|ref|NP_001168943.1| hypothetical protein LOC100382757 [Zea mays] gi|109107963|ref|XP_001086020.1| PREDICTED: 40S ribosomal protein S3 [Macaca mulatta] gi|417719|sp|P23396|RS3_HUMAN RecName: Full=40S ribosomal protein S3 gi|91207641|sp|Q3T169|RS3_BOVIN RecName: Full=40S ribosomal protein S3 gi|115502828|sp|Q0Z8U2|RS3_PIG RecName: Full=40S ribosomal protein S3 gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens] gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens] gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens] gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens] gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens] gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens] gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens] gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens] gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens] gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus] gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa] gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens] gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct] gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct] gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens] gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct] gi|223973891|gb|ACN31133.1| unknown [Zea mays] gi|296479794|gb|DAA21909.1| 40S ribosomal protein S3 [Bos taurus] Length = 243 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03] Length = 261 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 16/199 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ G++ + Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIL------GEQGRRIRE 62 Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 + + +K + + L +V ++A +S+ +L + RRA ++ M Sbjct: 63 LTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIME 122 Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVY 201 GA G +V+ SG+L A +++ + +G + Q +R ID T G GIKV Sbjct: 123 SGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKVK 181 Query: 202 VSLRDEVSDSDSTIPAAEH 220 + + + Sbjct: 182 IMRGSDPEGKSGPQKSLPD 200 >gi|272716532|gb|ACZ95549.1| ribosomal protein S3 [Fokienia hodginsii] Length = 663 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 510 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDI 569 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 570 SFQLRDGTRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 629 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 630 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 661 >gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus] gi|22001962|sp|Q90YS2|RS3_ICTPU RecName: Full=40S ribosomal protein S3 gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus] Length = 245 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPRG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748891|gb|ADL63925.1| ribosomal protein S3 [Myrothamnus flabellifolia] Length = 492 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ R I + + G +++K+R LSN T Sbjct: 327 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 383 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q +R FR + + V++ M+ G +G+++ Sbjct: 384 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSQIVKNIPLVMKKGVEGIRI 443 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 444 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 492 >gi|302749047|gb|ADL64003.1| ribosomal protein S3 [Spiraea sp. Qiu 05008] Length = 489 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q Sbjct: 348 IEIIPRNRIIPYGYHSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 407 Query: 124 LERRVV-FRRAMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L + FR ++ ++ M+ G +G+++ SGR GAE++RTEC G+ Sbjct: 408 LRNKTRSFRSIFRKIVKDIRLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFN 467 Query: 180 AHIDYGTAVAETAYGSCGIKVY 201 IDY A T +G G+KV+ Sbjct: 468 QKIDYTPAEVPTRFGILGVKVW 489 >gi|11465647|ref|NP_049318.1| ribosomal protein S3 [Porphyra purpurea] gi|4106954|gb|AAD03121.1| ribosomal protein S3 [Porphyra purpurea] Length = 227 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 22/226 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEY---GALLHEDLKIREYLQCHLKQAGVAKILI 57 MGQK+NP FR+G++ W+ G + LL E I +L + + + + + Sbjct: 1 MGQKVNPKGFRIGLSNLWHDEGQCYGKSFKNPKNLLKETRNIFTFLNQYFESKKLVRGQV 60 Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 E+ ++ YS + I+ K I K + I + N L+ Sbjct: 61 EQKV-FNKLKKYSIQYVPILPKSTPSICNTATKTTYAFKKNIQVRNYNATLWYQNGPLLC 119 Query: 118 QSIAQQLERRVVFRRAMKRAVQS----------------AMRFGADGVKVIASGRLNG-- 159 + I L++ + FR+ + Q G+KV +GR G Sbjct: 120 EFIKVSLKKGIAFRKIINTIQQLLVLKTPHKIVLKTSFGTNIMEYTGLKVRYTGRFGGSR 179 Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + ++ + L G V LQ + HI + ++ T G C ++V+++ + Sbjct: 180 SRMASSIVCLIGAVSLQKIETHIQFYSSSLHTKQGLCNLQVWMAYK 225 >gi|255626187|gb|ACU13438.1| unknown [Glycine max] Length = 236 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACHGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|331249296|ref|XP_003337266.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316256|gb|EFP92847.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 265 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 13/200 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + TH +I+ + ++G+KG Sbjct: 12 ADGVFYAEL-------SEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQKGRR 64 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + + A +S+ +L + RRA ++ Sbjct: 65 IRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRF 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M A G +V+ SG+L A +++ + +G + Q +D G GI Sbjct: 125 IMESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGI 183 Query: 199 KVYVSLRDEVSDSDSTIPAA 218 KV + ++ P Sbjct: 184 KVKIMRGNDTEGRGGAPPKP 203 >gi|272716598|gb|ACZ95598.1| ribosomal protein S3 [Metasequoia glyptostroboides] Length = 620 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 467 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 526 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 527 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 586 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 587 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 618 >gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti] gi|108875828|gb|EAT40053.1| 40S ribosomal protein S3 [Aedes aegypti] Length = 256 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 36 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 95 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 96 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 155 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 156 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 214 Query: 212 DST 214 Sbjct: 215 KPL 217 >gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica] gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica] gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica] gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica] Length = 239 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSE 98 YL+ L + G + + + T K II+ + R ++G K I ++ +K + + Sbjct: 27 YLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGDKAKRIRELTALVQKRFQIKDGA 86 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L +V + A +S+ +LE + RRA ++ M GA G +V+ SG+L Sbjct: 87 VELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYGVLRFIMESGAKGCEVVISGKLR 146 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSD 212 G + ++ + +G + + ++D G G+KV V L +V Sbjct: 147 G-QRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGVIGLKVKVMLPHDPAGKVGPKT 205 Query: 213 STIPAAEHRVVEKD 226 E R +++ Sbjct: 206 PYPDIVEIREPKEE 219 >gi|272716586|gb|ACZ95589.1| ribosomal protein S3 [Platycladus orientalis] Length = 627 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 474 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 533 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + QL FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 534 SFQLRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 593 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 594 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 625 >gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar] Length = 250 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 28 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 87 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 88 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 147 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 148 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 206 Query: 212 DST 214 Sbjct: 207 KPL 209 >gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum] Length = 238 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFKEN 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 84 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 144 R-AQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGIKVKIML 191 >gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum] gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum] Length = 241 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 79/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+K I ++ + N + Sbjct: 23 EFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLGEKNRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ++D T G GIKV + D + Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPSG 196 Query: 216 PAAEHRVVE 224 + + Sbjct: 197 KTGPKKPLP 205 >gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis] gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis] Length = 233 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q + +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKVKIML 190 >gi|126327841|ref|XP_001362617.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 243 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748561|gb|ADL63761.1| ribosomal protein S3 [Asparagus officinalis] Length = 473 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 6/144 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G +++KIR LSN TN+ + ++ +A+LIAQ I+ Q Sbjct: 330 IEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQ 389 Query: 124 LERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 FR + V+ M G +G+++ SGRL GAE++RTEC G+ Sbjct: 390 PRNNQISFRSIFSKVVKDIPIIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSRNVFN 449 Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203 IDY A T YG G+KV +S Sbjct: 450 QKIDYAPAEVSTRYGISGVKVRIS 473 >gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis] Length = 243 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302749015|gb|ADL63987.1| ribosomal protein S3 [Sarracenia flava] Length = 475 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 422 EGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 475 >gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata] gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata] gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata] gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata] Length = 243 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748611|gb|ADL63786.1| ribosomal protein S3 [Camellia japonica] Length = 475 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 6/174 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + + + M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 475 >gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool] Length = 235 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 22/208 (10%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G + + + T II+ + R ++G KG I ++ + Sbjct: 25 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L Sbjct: 85 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206 A+ +++ + +G + + +D + G G++V + L Sbjct: 145 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 203 Query: 207 -------EVSDSDSTIPAAEHRVVEKDS 227 V D IP + +++ + Sbjct: 204 TPLPDTIIVMDPKPEIPVVQPEEMDEGA 231 >gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar] gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar] gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar] Length = 245 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSRGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis] gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis] Length = 233 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 84 SVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 144 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 191 >gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi] Length = 211 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98 E+L L + G + + + T II+ + R ++G KG I ++ + Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELTAVVQKRFGFPEA 72 Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|295154300|gb|ADF83059.1| ribosomal protein S3 [Reederochloa eludens] Length = 101 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 64/101 (63%) Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVI 152 N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+ Sbjct: 1 NSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIK 60 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 +GRL G E++R EC +GR+PLQT+RA IDY T Y Sbjct: 61 IAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIY 101 >gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta] Length = 230 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + N + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + R +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + Sbjct: 185 KVKIMK 190 >gi|302748621|gb|ADL63791.1| ribosomal protein S3 [Capparis cynophallophora] Length = 505 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 9/180 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + +I + I + + G+ +++ +R LSN T Sbjct: 323 KVMELIEKFIN---LGRIEEWIKVIDMMIEIILRKRGIPYRYNSYFYEVKIMRSFLSNRT 379 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKV 151 N++ + ++ +A+LIAQ I+ QL +R F + + + M+ G +G+++ Sbjct: 380 NTKTLIESVKIKSVYQSASLIAQDISFQLRNKRRSFHSIYTLLVKEIAFLMKKGVEGIRI 439 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SGRL AE ++T CY G+ IDY A T YG G+KV++ + Sbjct: 440 CFSGRLKDAEKAKTHCYKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWILYSKKKGGR 499 >gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus] Length = 211 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV ++L ++ Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKITLPWDPSGKIGPK 191 Query: 212 DST 214 Sbjct: 192 KPL 194 >gi|223927997|gb|ACN23650.1| ribosomal protein S3 [Halimeda hummii] Length = 150 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 8/139 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSXWYASKRXYSKYVLEDNFVRTILSEKYKRAKFEKIPISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-------NSEIHLSVNEVPKPEIN 112 + I++++ + ++IGKK ++E +K + + + + + Sbjct: 61 IXDHLEIVIHAQKLDILIGKKSENLEIFQKXIKKFIFQYRQXEWNSKLKVILYIFRCXNT 120 Query: 113 ATLIAQSIAQQLERRVVFR 131 A+ IA I + LE+RV ++ Sbjct: 121 ASSIADFIVEHLEKRVPYK 139 >gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum subterraneum] gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum subterraneum] Length = 203 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 6/189 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 I EYL+ LK A + I T R+ +Y+ RP +IG KG I++I + L E Sbjct: 17 IEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFGVE 76 Query: 99 IHLSVNEVPKPE-INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + + +N ++A+ IAQ L R + +RR AV+ M GA GV+V SG+L Sbjct: 77 NPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKRIMEAGAKGVEVHISGKL 136 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 A SRTE + EG +P A ++Y G + G G++V + D + Sbjct: 137 TSA-RSRTEKFTEGFMPKSGELA-MNYVLEGKSSVLLKTGLFGVRVLIYPPDAPLPEEIK 194 Query: 215 IPAAEHRVV 223 + E Sbjct: 195 VKQIEAPRA 203 >gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremulae] Length = 240 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 7/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+K I ++ + N Sbjct: 23 EFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLGEKNRRIRELTSVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214 G + +++ +++G + ++D T G GIKV + L D + Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDATGKTGPK 201 Query: 215 IPAAEHRVVEK 225 P ++ V + Sbjct: 202 KPLPDNVAVAE 212 >gi|11466568|ref|NP_066458.1| ribosomal protein S3 [Rhodomonas salina] gi|10444155|gb|AAG17729.1|AF288090_5 ribosomal protein S3 [Rhodomonas salina] Length = 202 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 4/201 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M ++ N RL +N W S WF+ S+Y L DL I +Y H + Sbjct: 1 MTKRSNTNNLRLMLNKDWVSNWFSEKSQYPIFLQNDLIIYKYFFWHYYFKESLLKMRIIR 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I+ + I K + I L + + + N+ IA+ I Sbjct: 61 FSRKIILFFLISYDRKIMLKDFKLNLNTFLFKA---KNIFLVLYKNKFFKSNSFYIAKKI 117 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 A +E +V FR + + + + + + V+ GR+NG E+++ + ++G +P Q Sbjct: 118 ATLIENKVRFRSTVVKKLLNDAKL-VKSLLVVCKGRINGVEMAKKDFLVKGSIPFQKFHV 176 Query: 181 HIDYGTAVAETAYGSCGIKVY 201 +++ +A T GS +KV+ Sbjct: 177 KLNFSQVIANTLKGSVIVKVW 197 >gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus] Length = 243 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ ++ Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQERFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|225444782|ref|XP_002279950.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera] Length = 234 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|328541232|gb|AEB21840.1| ribosomal protein S3 [Telaranea diacantha] Length = 374 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++ TE G L IDY A YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAETEYKKYGETSLHVFSDQIDYAKTQASAPYGILGV 369 Query: 199 KVYVS 203 KV+VS Sbjct: 370 KVWVS 374 >gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus] gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus] Length = 244 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDTSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748701|gb|ADL63831.1| ribosomal protein S3 [Didymeles perrieri] Length = 477 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNM 94 K+ E ++ + + ++ I + + + G +++K+R LSN Sbjct: 310 KKVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNR 366 Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVK 150 TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G++ Sbjct: 367 TNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMQKGVEGIR 426 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 + SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 427 ICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVR 477 >gi|13449298|ref|NP_085481.1| ribosomal protein S3 [Arabidopsis thaliana] gi|6851009|emb|CAA69755.3| ribosomal protein S3 [Arabidopsis thaliana] Length = 556 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI E ++ G+ ++ I+ II+ +++K+R LSN TN+ Sbjct: 375 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 433 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR Sbjct: 434 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 492 Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 L AE ++T+CY + IDY A T YG G+KV++S Sbjct: 493 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWISY 541 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 20/154 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RLG N + +S F+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLGKNRSSDSSRFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 +I K R ++ P K + + K+ + E + Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTE 117 Query: 115 LIAQSIAQQLERRVVFR-RAMKRAVQSAMRFGAD 147 E R R R ++ V+S Sbjct: 118 ----------EERNEVRGRGARKRVESIRLDDRK 141 >gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group] gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza sativa] gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group] gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group] gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group] gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group] gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group] gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group] Length = 233 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + + +ID G GIKV + L Sbjct: 145 R-AQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIML 192 >gi|302748770|gb|ADL63865.1| ribosomal protein S3 [Gunnera monoica] Length = 467 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 9/166 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 E + + G+ + I + + G +++K+R LSN TN+ Sbjct: 305 ELIDKFIDLGGIGE---WIKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTNTN 361 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S Sbjct: 362 TLIESVKIKSFYQSASLIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICCS 421 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 GR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 422 GRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 467 >gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens] Length = 243 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+ + +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis] Length = 245 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIVPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|1507663|dbj|BAA12250.1| ribosomal protein S3 [Arabidopsis thaliana] Length = 531 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI E ++ G+ ++ I+ II+ +++K+R LSN TN+ Sbjct: 350 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 408 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR Sbjct: 409 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 467 Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 L AE ++T+CY + IDY A T YG G+KV++S Sbjct: 468 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWISY 516 >gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis] gi|133940|sp|P02350|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis] gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis] Length = 246 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii] gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii] gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii] gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii] gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii] gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii] Length = 230 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 17/212 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + S + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + + ID G GI Sbjct: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQGVLGI 184 Query: 199 KVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226 KV + L + + S +V +++ Sbjct: 185 KVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 216 >gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis] Length = 243 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + ++D G GIKV + L Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 191 >gi|302748780|gb|ADL63870.1| ribosomal protein S3 [Heisteria parvifolia] Length = 472 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 472 >gi|302749087|gb|ADL64023.1| ribosomal protein S3 [Thottea tomentosa] Length = 475 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ + I + + G +++K+R LSN + Sbjct: 307 KVMELIDKFIDLGGIGEF---LKGIEMMIEIILKNRRIPYGYNSYLNEVQKMRSFLSNFS 363 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 ++ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 364 YTKTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 423 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RTEC G+ IDY + T YG G+KV +S Sbjct: 424 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASTEVSTRYGISGVKVRIS 475 >gi|302748774|gb|ADL63867.1| ribosomal protein S3 [Hedera helix] Length = 478 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 313 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFNQIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 432 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 478 >gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus] gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus] Length = 250 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis] gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis] gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis] Length = 246 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|272716622|gb|ACZ95616.1| ribosomal protein S3 [Calocedrus decurrens] Length = 613 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 460 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDI 519 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + V++ R G G+++ GRL GAE++RTEC G+ Sbjct: 520 SFQPRDGTRSFRSIFWKIVRNLSLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 579 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 580 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 611 >gi|302749063|gb|ADL64011.1| ribosomal protein S3 [Stylobasium spathulatum] Length = 493 Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 328 KVMKLIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 386 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 387 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 446 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY +A T YG G+KV Sbjct: 447 SGRSKGAEIARTECGKYGKTSRYVFNQKIDYASAEVSTRYGISGVKV 493 >gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis] gi|1350988|sp|P47835|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis] gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis] Length = 246 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|255638159|gb|ACU19393.1| unknown [Glycine max] Length = 236 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RR ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis] gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis] gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis] Length = 246 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula] Length = 239 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina 98AG31] Length = 269 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 13/187 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + TH +I+ + ++G+KG Sbjct: 12 ADGVFYAEL-------SEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQKGRR 64 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + + A +S+ +L + RRA ++ Sbjct: 65 IRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRF 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M A G +V+ SG+L A +++ + +G + Q +D G GI Sbjct: 125 IMESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQGVLGI 183 Query: 199 KVYVSLR 205 KV + Sbjct: 184 KVKIMRG 190 >gi|302748637|gb|ADL63799.1| ribosomal protein S3 [Ceratophyllum submersum] Length = 505 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 6/158 (3%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 +I I + + G +++K+R LSN TN+ ++ ++ Sbjct: 348 CGRIGNLIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNTNTNIESVKIQSV 407 Query: 110 EINATLIAQSIAQQLERR-VVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRT 165 +A+ IAQ I+ + + FR + + VQ M G +G+ + SGR +GAE++RT Sbjct: 408 YQSASPIAQDISLKPRNNLISFRAILSQIVQDIPLDMPKGVEGIIICCSGRSSGAEIART 467 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EC G+ IDY A T YG G+KV +S Sbjct: 468 ECGKYGKTSCNVFNQKIDYAPAPVSTRYGISGVKVRIS 505 >gi|302748999|gb|ADL63979.1| ribosomal protein S3 [Roussea simplex] Length = 478 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 13/178 (7%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRII-------VYSARPGLIIGKKGT--DIEKIRKK 90 R ++ + K I+ K I + + + G +++K+R Sbjct: 288 RALIKKDQVIVKLKKKFIDLRGKGEFIKGVEMLMEIILKKRRIPYGYNFYLNEVKKMRSL 347 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGA 146 LSN T + ++ ++ +A+ IAQ I+ Q + FR + + + M+ G Sbjct: 348 LSNRTKTNTNIESVKIQSVYQSASPIAQDISFQPRHKTRSFRSILSQIVKDIPLVMKKGV 407 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 408 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 465 >gi|254733583|ref|ZP_05191303.1| 30S ribosomal protein S3 [Bacillus anthracis str. Western North America USA6153] Length = 61 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIERA 59 Query: 61 HK 62 Sbjct: 60 AN 61 >gi|302748695|gb|ADL63828.1| ribosomal protein S3 [Degeneria roseiflora] Length = 450 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 282 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 340 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 341 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDMKFVMPKGVEGIRICC 400 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 401 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 450 >gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae] gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae] Length = 226 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFAEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + + +++D G GIKV + D T Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQGVLGIKVKIM-----LPWDPTG 196 Query: 216 PAAEHRVVE 224 + + Sbjct: 197 KTGPKKPLP 205 >gi|272716650|gb|ACZ95637.1| ribosomal protein S3 [Cryptomeria japonica] Length = 604 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 451 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 510 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 511 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 570 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 571 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 602 >gi|272716638|gb|ACZ95628.1| ribosomal protein S3 [Taiwania cryptomerioides] Length = 604 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 451 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 510 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 511 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 570 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 571 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 602 >gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris] Length = 238 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 22 EFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L R+A V+ M GA G +VI SG+L Sbjct: 82 SVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVIVSGKL 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + ++ +ID G GIKV + D T Sbjct: 142 RG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 195 Query: 216 PAAEHRVVE 224 + + Sbjct: 196 KTGPKKPLP 204 >gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti] gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti] gi|108875827|gb|EAT40052.1| 40S ribosomal protein S3 [Aedes aegypti] Length = 243 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748800|gb|ADL63880.1| ribosomal protein S3 [Hydrolea ovata] Length = 436 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ + K I++ + R +++K+++ LSN T + Sbjct: 272 KVMELIEKFIDLGRIGEL-IKVSQKMIEIMLRNRRIPSEYSSYLNEVKKMQEVLSNRTKT 330 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q ++ FR + R ++ M+ G +G+++ Sbjct: 331 NTLIESVKIQSVYQSASLIAQDISFQPRLKKKTFRSILTKIVRDIRLVMKKGVEGIRISC 390 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGRL+GAE++RTEC G+ IDY +A T YG G+K Sbjct: 391 SGRLSGAEIARTECVKYGKTSCNVFNQKIDYASAEVSTRYGILGVK 436 >gi|302748635|gb|ADL63798.1| ribosomal protein S3 [Ceratophyllum demersum] Length = 510 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 6/158 (3%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKP 109 +I I + + G +++K+R LSN TN+ ++ ++ Sbjct: 353 CGRIGNLIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNTNTNIESVKIQSV 412 Query: 110 EINATLIAQSIAQQLERR-VVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRT 165 +A+ IAQ I+ + + FR + + VQ M G +G+ + SGR +GAE++RT Sbjct: 413 YQSASPIAQDISLKPRNNLISFRAILSQIVQDIPLDMPKGVEGIIICCSGRSSGAEIART 472 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 EC G+ IDY A T YG G+KV +S Sbjct: 473 ECGKYGKTSCNVFNQKIDYAPAPVSTRYGISGVKVRIS 510 >gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like [Callithrix jacchus] Length = 243 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M A G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESSAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|221126927|ref|XP_002162713.1| PREDICTED: similar to ribosomal protein S3 [Hydra magnipapillata] Length = 239 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L R+A V+ M GA G +VI SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + ++ +ID G GIKV + D T Sbjct: 143 RG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 196 Query: 216 PAAEHRVVE 224 + + Sbjct: 197 KTGPKKPLP 205 >gi|302749121|gb|ADL64040.1| ribosomal protein S3 [Xanthosoma mafaffa] Length = 479 Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 L+ +D + E ++ + G+ ++ I + + + G +++K+R Sbjct: 305 NLMGKDKALAELIEKFIDLGGIGELNKGI---EMMIEIILRKRRIPYGYNSYLNEVKKMR 361 Query: 89 KKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRF 144 LSN T++ + ++ +A+ IAQ I+ Q R+ FR + + + M Sbjct: 362 SFLSNRTHTASALIFSVKIKSVYQSASPIAQDISFQP-RKKSFRSIFSHIVKDIPLIMPK 420 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 421 GVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 479 >gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus] Length = 222 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 18/205 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G A + + T II+ + RP ++G+KG Sbjct: 9 ADGVFYAEL-------NELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQR 61 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K N + + L V K + A A+S+ +L + RRA ++ Sbjct: 62 IRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRF 121 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV-PLQTLRAH-IDYGTAVAETAYGSCGI 198 M GA G +VI +G+L A+ ++ + +G + +R +D+ G G+ Sbjct: 122 IMESGAKGAEVIVAGKLR-AQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGV 180 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVV 223 V + D T + Sbjct: 181 TVSIM-----LPHDPTGKEGPKTPL 200 >gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1] Length = 255 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 22/207 (10%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G + + + T II+ + R ++G KG I ++ + Sbjct: 45 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 104 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L Sbjct: 105 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 164 Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206 A+ +++ + +G + + +D + G G++V + L Sbjct: 165 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 223 Query: 207 -------EVSDSDSTIPAAEHRVVEKD 226 V D IP + +++ Sbjct: 224 NPLPDTIIVMDPKPEIPVVQPEEMDEG 250 >gi|272716642|gb|ACZ95631.1| ribosomal protein S3 [Taxodium distichum var. imbricarium] gi|272716646|gb|ACZ95634.1| ribosomal protein S3 [Taxodium distichum] Length = 607 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 454 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 513 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 514 SFQPRDGTRSFRSIFWKIVRDLSLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 573 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 574 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 605 >gi|272716574|gb|ACZ95580.1| ribosomal protein S3 [Sequoia sempervirens] Length = 632 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 479 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 538 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 539 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 598 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 599 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 630 >gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3P [Thermoproteus neutrophilus V24Sta] gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Thermoproteus neutrophilus V24Sta] Length = 224 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++ Sbjct: 18 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVK 77 Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 +I L N E + V+++ PE+ ++A IA + + V FRR M AV+ Sbjct: 78 EISNILMNKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAVRQL 137 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +++ SG+L+ E +R E + G++ A + G GI+ Sbjct: 138 MEAGAKGFEIVVSGKLS-TERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 196 Query: 200 VYVS-----LRDEVSDSDSTIPAA 218 V ++ DE T P A Sbjct: 197 VRIAPAALQYSDEYKIKPPTKPEA 220 >gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548] gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548] Length = 220 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG ++ Sbjct: 15 YKKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 74 Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ L+N E + V+++ PE+ ++A IA + R V FRR M AV+ Sbjct: 75 EVSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQL 134 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +++ SG+L+ E ++ E G++ A + G GI+ Sbjct: 135 MEAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 193 Query: 200 VYV-----SLRDEVSDSDSTIPAA 218 V + DE T P A Sbjct: 194 VRITPATLRYSDEYKIKPPTRPEA 217 >gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis] gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis] Length = 239 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 15/212 (7%) Query: 14 VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARP 73 ++ A G Y L E L L + G + + I ++ II+ + RP Sbjct: 6 ISKKHQCV--ADGVFYAEL-------DELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRP 56 Query: 74 GLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130 IIG+ I ++ + + + L V + + A A+++ +L + Sbjct: 57 QEIIGENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPV 116 Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188 RRA ++SA+ GA G +VI SG+L + + + EG + + +D T Sbjct: 117 RRAAYAVIRSALEAGAKGCEVIVSGKLR-QQRANAMKFKEGYMIKTGNACKEFVDEATRH 175 Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 G G+KV + + A Sbjct: 176 VLVKQGMLGVKVRIMKPTDPEGRLGPKKALPD 207 >gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei TREU927] gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei] Length = 266 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ S + ++G+KG I ++ ++ N Sbjct: 74 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 133 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 134 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 193 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + + +D T G+ G+ V + + + D + Sbjct: 194 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 252 Query: 216 PAA 218 P Sbjct: 253 PDV 255 >gi|302749123|gb|ADL64041.1| ribosomal protein S3 [Ximenia americana] Length = 467 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 302 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 360 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++ Sbjct: 361 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSKIVKDIPLVMKKGVEGIRICC 420 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 421 SGRSEGAEIARTECGKYGKRSRNVFNQKIDYAPAEVSTRYGILGVKV 467 >gi|302748925|gb|ADL63942.1| ribosomal protein S3 [Oxalis sp. Qiu 94028] Length = 473 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 5/165 (3%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNT 368 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ SG Sbjct: 369 LIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 428 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 RL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 429 RLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 473 >gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula] Length = 239 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RR ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus] Length = 243 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302749109|gb|ADL64034.1| ribosomal protein S3 [Verbena bonariensis] Length = 474 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKGVTGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 474 >gi|328541254|gb|AEB21851.1| ribosomal protein S3 [Telaranea lawesii] Length = 371 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + +EK++ S+ T + + ++ +A+LIAQ I+ +L ++ FR+ + + Sbjct: 249 RYYYLEKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLGQKKSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368 Query: 199 KVY 201 KV+ Sbjct: 369 KVW 371 >gi|153799846|gb|ABS50654.1| ribosomal protein S3 [Arabidopsis thaliana] gi|153799848|gb|ABS50655.1| ribosomal protein S3 [Arabidopsis thaliana] Length = 518 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI E ++ G+ ++ I+ II+ +++K+R LSN TN+ Sbjct: 354 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 412 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR Sbjct: 413 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 471 Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 L AE ++T+CY + IDY A T YG G+KV++ Sbjct: 472 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWI 518 >gi|288191311|gb|ADC44008.1| ribosomal protein S3 [Soyauxia floribunda] Length = 166 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 4/152 (2%) Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I+ II+ + +++K+R LSN TN+ + ++ +A+ I Sbjct: 9 IKGIEMMIEIILRNRIIPYRYNSYLKEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPI 68 Query: 117 AQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGR 172 AQ I+ Q + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ Sbjct: 69 AQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGK 128 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 IDY A T YG G+KV++S Sbjct: 129 TSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 160 >gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana] Length = 248 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G G+ Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|302748697|gb|ADL63829.1| ribosomal protein S3 [Desfontainia spinosa] Length = 479 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 11/174 (6%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS----N 93 K+ E + + G+ + I + + G KK+ N Sbjct: 306 KVMELIDKFIDLGGIGE---WIRGIEMMIEIILRNRRIPYGYNYNSYLNEVKKMRSLLSN 362 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ---SAMRFGADGVK 150 T++ + + +A+ IAQ I+ Q R FR + V+ M+ G G++ Sbjct: 363 RTSTNTLIESVKSKSVYQSASPIAQDISFQP-RNKTFRAIFNKIVKYIPLVMKKGVGGIR 421 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + SGRL GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 422 ICCSGRLKGAEIARTECGKYGKTDRNVFNQKIDYAPAEVSTRYGISGVKVWISY 475 >gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3 (RPS3C) [Arabidopsis thaliana] gi|75170994|sp|Q9FJA6|RS33_ARATH RecName: Full=40S ribosomal protein S3-3 gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana] gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana] gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana] gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana] Length = 248 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G G+ Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|272716658|gb|ACZ95643.1| ribosomal protein S3 [Juniperus squamata] Length = 633 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 480 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 539 Query: 121 AQQLE-RRVVFRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q + FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 540 SFQPRDGKRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 599 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 600 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 631 >gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense DAL972] Length = 266 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ S + ++G+KG I ++ ++ N Sbjct: 74 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 133 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 134 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 193 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + + +D T G+ G+ V + + + D + Sbjct: 194 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 252 Query: 216 PAA 218 P Sbjct: 253 PDV 255 >gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis] Length = 190 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 11/184 (5%) Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLS 102 L + G A + I++T K+ I++ + R ++G+KG I + +K E+ L Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 +V + A +++ +L + RRA V+ M GA G +VI SG+L A+ Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKLR-AQR 119 Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 ++ + +G + R +ID G GIKV + D + Sbjct: 120 AKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIM-----LPHDPSGKTGPK 174 Query: 221 RVVE 224 + Sbjct: 175 APLP 178 >gi|50306913|ref|XP_453432.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis] Length = 237 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 85/217 (39%), Gaps = 21/217 (9%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T II+ + + ++G+ G Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVGENGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K I L V ++A A+S+ +L + RRA V+ Sbjct: 66 INELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L A +++ + +G + Q + I+ T G GI Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQGVLGI 184 Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVVEKDS 227 KV + + D+ + I E V + S Sbjct: 185 KVKIMKDPSRNTSGPKALPDAVTIIEPKEEEPVLEPS 221 >gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49] gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49] gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG] Length = 235 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 22/207 (10%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L C L + G + + + T II+ + R ++G KG I ++ + Sbjct: 25 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L Sbjct: 85 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206 A+ +++ + +G + + +D + G G++V + L Sbjct: 145 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 203 Query: 207 -------EVSDSDSTIPAAEHRVVEKD 226 V D IP + +++ Sbjct: 204 NPLPDTIIVMDPKPEIPVVQPEEMDEG 230 >gi|50553820|ref|XP_504321.1| YALI0E23694p [Yarrowia lipolytica] gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica] Length = 246 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 14/200 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G + + + T I+V + ++G+ G Sbjct: 15 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGRR 67 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + + V + ++A +S+ +L + RRA V+ Sbjct: 68 IRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVRY 127 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+V+ SG+L A +++ + +G + Q + ID T G G+ Sbjct: 128 VMDAGAKGVEVVVSGKLRAA-RAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQGVLGV 186 Query: 199 KVYVSLRDEVSDSDSTIPAA 218 KV + D + +P + Sbjct: 187 KVKIMR-DPATSKKPGVPKS 205 >gi|44500|emb|CAA47894.1| 30 S ribosomal protein S3 [Mycoplasma pneumoniae] Length = 106 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 4/103 (3%) Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 R AM++++ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL TLRA IDY Sbjct: 2 PLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLSTLRADIDYALEK 61 Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPA----AEHRVVEKDS 227 A+T YG G+KV+++ + + PA + + + + Sbjct: 62 AQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKKQPNRQN 104 >gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1] gi|51701889|sp|Q8SQM3|RS3_ENCCU RecName: Full=40S ribosomal protein S3 gi|19171370|emb|CAD27095.1| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1] Length = 228 Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95 ++E+ + L G + + + +II+ A+P IG+K + + + + + Sbjct: 32 LKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLEVP 91 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + + + V +V + + A + A I +++ V +RRA+ A+++A A G ++I SG Sbjct: 92 DESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSG 151 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 +L G + +++ + +G V + + A DY G A ET G GI+V + L Sbjct: 152 KLKG-QRAKSVKFQDG-VLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLP 202 >gi|152060898|sp|A3MTL3|RS3_PYRCJ RecName: Full=30S ribosomal protein S3P Length = 216 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG ++ Sbjct: 11 YKKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70 Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ L+N E + V+++ PE+ ++A IA + R V FRR M AV+ Sbjct: 71 EVSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQL 130 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +++ SG+L+ E ++ E G++ A + G GI+ Sbjct: 131 MEAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189 Query: 200 VYV-----SLRDEVSDSDSTIPAA 218 V + DE T P A Sbjct: 190 VRITPATLRYSDEYKIKPPTRPEA 213 >gi|1351019|sp|P49386|RT03_BRANA RecName: Full=Ribosomal protein S3, mitochondrial Length = 555 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 7/184 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 LL +D K+ E ++ G+ ++ + I + + G+ G +++K+R Sbjct: 368 NLLGKD-KVMELIEKFKDLGGIEEL---IKVIDMMIEIILRKRGIPYGYNSYFNEVQKMR 423 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148 LSN TN++ + ++ +A+LIAQ I+ QL+ + ++ + + +G Sbjct: 424 SFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSTHSIFAKIVKEIPKRVEG 483 Query: 149 VKVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +++ SGRL AE ++T+CY + IDY A T YG G+KV++S + Sbjct: 484 IRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQK 543 Query: 208 VSDS 211 Sbjct: 544 KGGR 547 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 9/101 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RLG N + +S F+ YG +++D+ +R Y + + Sbjct: 1 MARKGNPISVRLGKNRSSDSSRFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95 ++ K R ++ P K + + K+ Sbjct: 60 CILLHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWW 98 >gi|291334068|gb|ADD93741.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S05-C114] Length = 68 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 46/64 (71%) Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GA+G+++ +GRL GA+++RTE EGRVPL TLR +IDYG A T YG GIK ++ Sbjct: 1 MGAEGIRIQCAGRLAGADIARTEQLREGRVPLHTLRENIDYGLVEANTVYGIIGIKCWIC 60 Query: 204 LRDE 207 L++E Sbjct: 61 LKEE 64 >gi|254564691|ref|XP_002489456.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Pichia pastoris CBS 7435] Length = 243 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L EY L + G + + + T II+ + + ++G+ G Sbjct: 14 ADGVFYAEL-------NEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGRR 66 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + ++ L V ++A +S+ +L + RRA V+ Sbjct: 67 IRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+V+ SG+L A +++ + +G + Q + I+ T G GI Sbjct: 127 VMDSGAKGVEVVVSGKLRAA-RAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMR 191 >gi|302748591|gb|ADL63776.1| ribosomal protein S3 [Brexia madagascariensis] Length = 480 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 9/169 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 315 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 371 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++ Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 431 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 432 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGXSGVKV 480 >gi|272716630|gb|ACZ95622.1| ribosomal protein S3 [Thujopsis dolabrata] Length = 613 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 460 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 519 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 520 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 579 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 580 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 611 >gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST] gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST] Length = 244 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVRKRFGFAPG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus] Length = 245 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ ++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 + Sbjct: 202 EPL 204 >gi|4106851|gb|AAD03044.1| ribosomal protein S3 [Solanum tuberosum] Length = 151 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 4/134 (2%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R L N TN+ + ++ +A+ IAQ I+ Q + FR + V+ Sbjct: 10 NEVQKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKD 69 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 70 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 129 Query: 198 IKVYVSLRDEVSDS 211 +KV++S + Sbjct: 130 VKVWISYSKKKGGR 143 >gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864] Length = 252 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + + Sbjct: 24 EFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFGFPEN 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA GV+V+ SG+L Sbjct: 84 SVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGVEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLR--AHIDYGTAVAETAYGSCGIKVYVSL 204 G + ++ + +G + +ID G G+KV + L Sbjct: 144 RG-QRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVLGLKVKIML 191 >gi|73987948|ref|XP_860487.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 9 [Canis familiaris] Length = 195 Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + ++D G GIKV + L Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 191 >gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona intestinalis] Length = 260 Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 16/201 (7%) Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82 F + A L+E L L + G + + + T II+ + R ++G+KG Sbjct: 11 FVNDGLFKAELNE------LLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLGEKGR 64 Query: 83 DIEK---IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 I + + +K + + L +V + AT +S+ +L + RRA ++ Sbjct: 65 RIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACYGVLR 124 Query: 140 SAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCG 197 M GA G +V+ SG+L G + ++ +++G + +R ++D G G Sbjct: 125 FIMESGAKGCEVVVSGKLRG-QRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQGVLG 183 Query: 198 IKVYVSLR----DEVSDSDST 214 IKV + L ++ Sbjct: 184 IKVKIMLPWDPQGKIGPKKPL 204 >gi|272716578|gb|ACZ95583.1| ribosomal protein S3 [Sequoiadendron giganteum] Length = 599 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 446 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 505 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 506 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 565 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 566 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 597 >gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA] gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei] Length = 218 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 7/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96 E+L L + G + + + T +I+ + R ++G KG I + ++K+ N Sbjct: 19 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKLT 78 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+ Sbjct: 79 NSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 138 Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 L A+ +++ + +G + + ++ T A+ G GIKV + L Sbjct: 139 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 188 >gi|272716571|gb|ACZ95578.1| ribosomal protein S3 [Agathis dammara] Length = 718 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 5/129 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER--RVVFRRAMKRAVQ 139 ++ K+R LS+ TN+ + ++ +A+LIAQ + L + FR + V+ Sbjct: 590 NEVRKMRSLLSDRTNTNTFIGPVKIKSVFQSASLIAQDTSLLLRSNIKRSFRSIFNQIVK 649 Query: 140 SAMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 + G+++ SGRL GA+++RTE + IDY A T YG Sbjct: 650 GIPKVTRKRVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGHKIDYAYAKVSTRYGIL 709 Query: 197 GIKVYVSLR 205 G+KV++S R Sbjct: 710 GVKVWISFR 718 Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL N + +S WF+ YG L+++D+ R+Y + + Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSDHY-YGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARP 73 + + K R ++ P Sbjct: 60 CIPHHSPK--RTFIHLFFP 76 >gi|302748747|gb|ADL63854.1| ribosomal protein S3 [Galbulimima belgraveana] Length = 446 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 278 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 336 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + ++ M G +G+++ Sbjct: 337 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDMKLVMPKGVEGIRICC 396 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 397 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 446 >gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri] Length = 220 Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + I T II+ + R ++G KG I ++ +K + Sbjct: 2 EFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFADG 61 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 62 AIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 121 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 122 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 170 >gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] Length = 249 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV V L Sbjct: 185 KVKVML 190 >gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis] Length = 235 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|302749077|gb|ADL64018.1| ribosomal protein S3 [Terminalia catappa] Length = 444 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 + E ++ + +G+ ++ I+ II+ + + +++K+R LSN T + Sbjct: 279 MVMELIEKFIDLSGIGEL-IKGIEMMIEIILRNIKIPYGYNSYLNEVKKMRSFLSNRTKT 337 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++ Sbjct: 338 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIYSQIVKYIPLVMKKGVEGIRICC 397 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 398 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 444 >gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius] Length = 247 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 SVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus] Length = 239 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFSFPEH 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D T G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201 Query: 212 DSTIPAAEHRVVEKD 226 +++ Sbjct: 202 RPLPDNVSVVEPKEE 216 >gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus] Length = 243 Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|272716594|gb|ACZ95595.1| ribosomal protein S3 [Cupressus funebris] Length = 633 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 480 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 539 Query: 121 AQQLE-RRVVFRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q + FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 540 SFQPRDGKRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 599 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG G+KV++ Sbjct: 600 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 631 >gi|302748745|gb|ADL63853.1| ribosomal protein S3 [Galax urceolata] Length = 477 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 7/167 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMKLIEKFIDLGEIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A++IAQ I+ QL R F + +K + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASMIAQDISFQLRNKTRSFRSFFSKIVKD-IPLVMKKGVEGIRIC 430 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 431 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 477 >gi|295154458|gb|ADF83138.1| ribosomal protein S3 [Psammagrostis wiseana] Length = 148 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 17/148 (11%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61 +S WFA+ Y L ED KIR ++ ++++ + I I++ Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60 Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 +I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADG 148 A QL+ RV FR+AMK+A++ + G Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKG 148 >gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus] Length = 251 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|302748786|gb|ADL63873.1| ribosomal protein S3 [Hibbertia cuneiformis] Length = 477 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 6/174 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D I E+++ + G+ ++ I+ II+ + R +++K+R Sbjct: 306 NLMDKDKVI-EWIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSL 363 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 364 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 423 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 424 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 477 >gi|302749069|gb|ADL64014.1| ribosomal protein S3 [Syringa sp. Qiu 95037] Length = 472 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472 >gi|2500399|sp|P79891|RS3_AMBME RecName: Full=40S ribosomal protein S3 gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum] Length = 253 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata] Length = 248 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G G+ Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|218458652|ref|ZP_03498743.1| 30S ribosomal protein S3 [Rhizobium etli Kim 5] Length = 79 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 3/62 (4%) Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225 E Y EGRVPL TLRA IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E Sbjct: 1 EWYREGRVPLHTLRADIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEG 57 Query: 226 DS 227 D+ Sbjct: 58 DA 59 >gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 270 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 22/217 (10%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G A + + T II+ + + ++G+KG Sbjct: 17 ADGVFYAEL-------NELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEKGQR 69 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L V + A A+S+ +L + RRA V+ Sbjct: 70 IRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGVVRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M A G +VI SG+L G + ++ + +G + + + D G GI Sbjct: 130 VMEASAKGCEVIVSGKLRG-QRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVIGI 188 Query: 199 KVYVSL---------RDEVSDSDSTIPAAEHRVVEKD 226 KV + L D TI + + Sbjct: 189 KVAIMLPHDPKGVQGPKIPLDDVVTILEPKEEPSPES 225 >gi|72058324|ref|XP_798304.1| PREDICTED: similar to ribosomal protein S3 [Strongylocentrotus purpuratus] gi|115649138|ref|XP_001204398.1| PREDICTED: similar to ribosomal protein S3 [Strongylocentrotus purpuratus] Length = 279 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 11/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFNFAEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ++ ++D G GIKV + +V+ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQGVLGIKVKIMRPFDVTGKTGPK 201 Query: 216 PAAEH-----RVVEKD 226 E++ Sbjct: 202 KPLPDVISISEPKEEE 217 >gi|302749005|gb|ADL63982.1| ribosomal protein S3 [Saintpaulia magungensis] Length = 469 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 305 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 363 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + +++ M+ G +G+++ Sbjct: 364 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSILTKILKNIPLVMKKGVEGIRICC 423 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 424 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVK 469 >gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi] gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi] Length = 228 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 6/185 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L + G + + + T II+ + RP ++G G ++++ + Sbjct: 25 EFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDNGRRMKELTSVIQKRFGFEEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 +I L V ++A A+S+ Q+L V R+A ++ M GA G VI SG+L Sbjct: 85 KIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGVLRFVMDSGAKGGAVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 A+ +++ + EG + Q ++ ++D G GIKV V L V + Sbjct: 145 R-AQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVLGIKVKVMLPWVVGTQAGSN 203 Query: 216 PAAEH 220 + Sbjct: 204 QKPQP 208 >gi|302748703|gb|ADL63832.1| ribosomal protein S3 [Dillenia indica] Length = 477 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 6/174 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D I E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 306 NLMDKDKVI-ELIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 363 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 364 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 423 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV Sbjct: 424 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 477 >gi|302748977|gb|ADL63968.1| ribosomal protein S3 [Potamogeton berchtoldii] Length = 450 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 5/170 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ ++ G LI+ II+ + +++K+R LS T + Sbjct: 282 KVMELIEK-CRELGSTGELIKGMEMMIEIILRNRGIPYGYNSYLNEVQKMRSFLSERTKT 340 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADG---VKVIA 153 E + ++ +A+ IAQ I+ Q +R FR V+ G +++ Sbjct: 341 ETSIESVKIQSVYQSASPIAQDISFQSRNKRRSFRSIFSNIVKDIPSKRTKGVEGIRLCC 400 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGR +GAE++RTEC G+ IDY A T YG G+KV++S Sbjct: 401 SGRSSGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWIS 450 >gi|27734520|sp|Q8ZWI0|RS3_PYRAE RecName: Full=30S ribosomal protein S3P Length = 218 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 11/209 (5%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG Sbjct: 11 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70 Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 +I I + N +I + ++++ PE+ ++A IA + + V FRR M A++ Sbjct: 71 EISNILTTKLGVENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQL 130 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +++ SG+L+ E +R E G++ A + G GI+ Sbjct: 131 MEAGAKGFEIVVSGKLS-TERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189 Query: 200 VYVSLRDEVSDSD-STIPAAEHRVVEKDS 227 V ++ + P V++ S Sbjct: 190 VRIAPATLQYSDEYKIKPPVRPEAVQQQS 218 >gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda] Length = 243 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPER 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192 >gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429] gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429] Length = 228 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 7/197 (3%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L + +K I+E+L L + G + +T RIIVY+ RP IIG+KG ++ Sbjct: 11 YKKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVK 70 Query: 86 KIRKK-LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 ++ + + + V + PE+N +IA IA + + V FRRA A++ M Sbjct: 71 ELTELLSKKLEVENPIIDVTPIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMDG 130 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYV 202 GA G +V SG+L +E SR E Y+ G + R + G GI+V + Sbjct: 131 GAKGAEVTISGKLT-SERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189 Query: 203 SLRDEVSDSDSTIPAAE 219 + SD P + Sbjct: 190 TPPIRFSDEFQIKPPSR 206 >gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3 (RPS3B) [Arabidopsis thaliana] gi|75183568|sp|Q9M339|RS32_ARATH RecName: Full=40S ribosomal protein S3-2 gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana] gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana] gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana] gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana] gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana] Length = 249 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +VI SG+L A +++ + +G + Q + +ID G GI Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184 Query: 199 KVYVSL 204 KV V L Sbjct: 185 KVKVML 190 >gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581] Length = 217 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 13/205 (6%) Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y L++ + ++ E+ L AG A + RT + +I+ A P +++G + Sbjct: 14 YAKYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLH 73 Query: 86 KIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 KI ++ V+++ K ++A ++ ++ +LE + RRA +++AM Sbjct: 74 KIEYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAM 133 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKV 200 R GA G +VI +G+L A+ +R + EG R + T + G G+KV Sbjct: 134 RAGAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192 Query: 201 YVS----LRDEVSDSDSTIPAAEHR 221 + + D P + ++ Sbjct: 193 RIYNPNIRGAVMPDKIEIGPFSRNK 217 >gi|254684380|ref|ZP_05148240.1| 30S ribosomal protein S3 [Bacillus anthracis str. CNEVA-9066] Length = 60 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + AK+ IER Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAGAKVEIERA 59 Query: 61 H 61 Sbjct: 60 A 60 >gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7] gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7] Length = 221 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96 E+L L + G + + + T +I+ + R ++G KG I + ++K+ N + Sbjct: 23 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 82 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+ Sbjct: 83 NSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 142 Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 L A+ +++ + +G + + ++ T A+ G GIKV + L Sbjct: 143 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 192 >gi|302748969|gb|ADL63964.1| ribosomal protein S3 [Podocarpus macrophyllus] Length = 503 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 9 LF-RLGVNCT---WNSRWFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHK 62 F R+G T W S+ LL +I R++ ++ + +G K +I Sbjct: 299 GFQRIGGARTYLLWRSK----KKILTYLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIG 354 Query: 63 N------CRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114 + + G+ G +++K+R LS TN+ + ++ +A+ Sbjct: 355 GVMRGIEMMLEIRLRGAGIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSAS 414 Query: 115 LIAQSIAQQLERRVVFRRAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171 IAQ I+ +L R FR R + M G+++ SGRL GAE++RTEC G Sbjct: 415 PIAQDISSRLRDRKSFRSIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYG 474 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 + R IDY +A T YG G+KV Sbjct: 475 KTSCNAFRHRIDYASARVSTRYGIXGVKV 503 >gi|62645168|ref|XP_575143.1| PREDICTED: ribosomal protein S3-like [Rattus norvegicus] gi|109470011|ref|XP_001057158.1| PREDICTED: ribosomal protein S3-like [Rattus norvegicus] Length = 243 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNS 97 E+L L + G +++ + T II+ R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLGEKGRRIRELTAVVQKQFVFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA+G +V+ SG+L Sbjct: 83 SVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACYGVLRFIMESGAEGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus] Length = 176 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 11/179 (6%) Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109 + + + T II+ + R ++G+KG I ++ +K + + + L +V Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60 Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169 + A +S+ +L + RRA ++ M GA G +VI SG+L G + +++ ++ Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRG-QRAKSMKFV 119 Query: 170 EGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 +G + R +ID G GIKV + D T + + + Sbjct: 120 DGFMIHSGYPTREYIDSAVTHVHLRQGVLGIKVKIM-----LPHDPTGKSGPKKPLPDQ 173 >gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi] gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi] Length = 220 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96 E+L L + G + + + T +I+ + R ++G KG I + ++K+ N + Sbjct: 21 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 80 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+ Sbjct: 81 NSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 140 Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 L A+ +++ + +G + + ++ T A+ G GIKV + L Sbjct: 141 LR-AQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 190 >gi|302748794|gb|ADL63877.1| ribosomal protein S3 [Hydnocarpus anthelminthicus] Length = 486 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 5/165 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++ Sbjct: 382 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 SGRL GAE++RTEC G+ IDY A T YG G+ Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGV 486 >gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax SaI-1] gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H] gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax] gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H] Length = 222 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96 E+L L + G + + + T +I+ + R ++G KG I + ++K+ N + Sbjct: 23 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 82 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+ Sbjct: 83 NSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 142 Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 L A+ +++ + +G + + ++ T A+ G GIKV + L Sbjct: 143 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 192 >gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei TREU927] gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei] gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense DAL972] Length = 214 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ S + ++G+KG I ++ ++ N Sbjct: 22 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + + +D T G+ G+ V + + + D + Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 200 Query: 216 PAA 218 P Sbjct: 201 PDV 203 >gi|302748844|gb|ADL63902.1| ribosomal protein S3 [Limeum africanum] Length = 468 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 6/172 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ + ++ + G+ + LI+ II+ + R +++K+R Sbjct: 299 NLLGKD-KVMKLIEKFIDLGGI-RELIKGIEMIIEIILKNRRIPYGYNSYLNELKKMRSF 356 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + +R FR + V+ M+ G Sbjct: 357 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKKIPLVMKKGV 416 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 +G+++ SGRL GAE++RTEC G+ L IDY +A T YG G+ Sbjct: 417 EGIRICCSGRLAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGV 468 >gi|302749057|gb|ADL64008.1| ribosomal protein S3 [Sterculia balanghas] Length = 476 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 10/170 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NM 94 K+ E ++ + G+ ++ I + + G + +K++K S N Sbjct: 310 KVMELIEKFINLGGIEEL---IKGIEMIIEIILRNRRIPYGYNNSYFKKVKKMQSLLSNR 366 Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVK 150 TN+ + ++ +A+ IAQ I+ QL ++ FR + + + M+ G G++ Sbjct: 367 TNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSIIVKDIPLVMKKGVSGIR 426 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 + SGRL GAE++RTEC + IDY A T YG G+KV Sbjct: 427 ICCSGRLKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYGISGVKV 476 >gi|272716654|gb|ACZ95640.1| ribosomal protein S3 [Cunninghamia lanceolata] Length = 587 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 434 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIESVYQSASPIAQDI 493 Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + Q FR + + V+ R G G+++ GRL GAE++RTEC G+ Sbjct: 494 SFQPRDGTRSFRSILWKIVRDISLVMPFLRKGVGGIRICRPGRLKGAEIARTECREYGKT 553 Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 T R IDY A T YG GIKV++ Sbjct: 554 SCNTFRHQIDYAYAKVSTRYGILGIKVWIPFP 585 >gi|1350990|sp|P48153|RS3_MANSE RecName: Full=40S ribosomal protein S3 gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta] Length = 243 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192 >gi|296040602|gb|ADG85269.1| ribosomal protein S3 [Silene noctiflora] Length = 452 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 5/171 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ G + LI+ II + R +++K+R LS T + Sbjct: 277 KVMKLIEK-CIDLGKIRELIKGIEMMREIIPKNRRIPYGYDYHLNEVKKMRSFLSTRTKT 335 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKVIA 153 + ++ +A+LIA+ I+ QL+++ F + ++ G+++ Sbjct: 336 NTVIKSVKITSVYQSASLIAKDISFQLKKKSRDFSSIFSQIIRKIPLRMKKEIEGIRICC 395 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S Sbjct: 396 SGRLRGAEIARTECGKYGKTSCNVLNQKRDYASALVSTRYGIVGVKVWISY 446 >gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia] Length = 243 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192 >gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga] Length = 215 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+ L + G + + I T + II+ + + ++G+KG I ++ + + Sbjct: 25 EFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAVLGEKGRRIRELTSVIQKRFGYPEN 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G ++I SG+L Sbjct: 85 SIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRACYGVLRFIMESGAQGCEIIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ +++G + + ++ Y G GIKV + D Sbjct: 145 RG-QRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLRQGVLGIKVKIM-----LPHDPKE 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 GKGVKKPLP 207 >gi|225429650|ref|XP_002281141.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 235 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNS 97 E L L + G + + + T II+ + R ++G + + +K + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGNXXXXXXXLTSVVQKRFKFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190 >gi|302748933|gb|ADL63946.1| ribosomal protein S3 [Passiflora suberosa] Length = 474 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 4/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + I++ ++ ++ K+R LSN TN+ Sbjct: 308 KVIELIEKFRNLGRIGEFKKGIEMMIEIILMRNSIIPYGYNSYLNEMTKMRSLLSNRTNT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + + + M+ G G+++ Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQLRKKTRSFRSILTKIVKDIPLVMKKGVGGIRICC 427 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGRL GAE++RTEC G+ L IDY A T YG G+KV Sbjct: 428 SGRLAGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYGILGVKV 474 >gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis sp. PS1010] Length = 247 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T +I+ + R ++G++G I+++ + Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L Sbjct: 85 SVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + ++ +++G + + +I + G GIKV + L Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLP 193 >gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans] Length = 263 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 45 EFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFEPG 104 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 105 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 164 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 165 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 217 Query: 215 IPAAEHRVVE 224 + + Sbjct: 218 NKIGPKKPLP 227 >gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener] gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] Length = 214 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 83/191 (43%), Gaps = 6/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ + + ++G+KG I ++ ++ + Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + + +D T G+ G+KV + L + D + + Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQDEEEIL 200 Query: 216 PAAEHRVVEKD 226 P + K+ Sbjct: 201 PDVITVLEPKE 211 >gi|302748818|gb|ADL63889.1| ribosomal protein S3 [Impatiens pallida] Length = 473 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 12/176 (6%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 LL +D K+ E ++ L + G IE I + + + G +++K+R Sbjct: 304 NLLGKD-KVMELIEKFLGRIGEFLKGIEMM-----IEIILRKRRIPYGYNYYLNEVQKMR 357 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRF 144 LSN + + ++ +A+ IAQ I+ Q + FR + V++ M+ Sbjct: 358 SLLSNRAKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKNMKLVMKK 417 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 418 GVEGIRICCSGRSEGAEIARTECGKFGKTSRNVFNQKIDYAPAPVSTRYGISGVKV 473 >gi|302748881|gb|ADL63920.1| ribosomal protein S3 [Montinia caryophyllacea] Length = 472 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELVEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ ++ Q + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDLSFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGRL GAE++RTEC G+ IDY A T YG G+K Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472 >gi|223927729|gb|ACN23474.1| ribosomal protein S3 [Halimeda cuneata] Length = 101 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKG 81 + I++++ +P ++I + Sbjct: 61 IEDHLEIVIHAQKPDILIKGEN 82 >gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28] gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28] Length = 228 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 7/198 (3%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L + +K I+E+L L + G + +T RII+Y+ RP IIG+KG ++ Sbjct: 11 YKKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVK 70 Query: 86 KIRKK-LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 ++ + + V + PE+N +IA IA + + V FRRA A++ M Sbjct: 71 ELTDLLSRKLDVENPIIDVTPIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMDG 130 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYV 202 GA G +V SG+L +E SR E Y+ G + R + G GI+V + Sbjct: 131 GAKGAEVTISGKLT-SERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189 Query: 203 SLRDEVSDSDSTIPAAEH 220 + SD P + Sbjct: 190 TPPIRFSDEFQIKPPSRE 207 >gi|1323710|gb|AAC00526.1| ribosomal protein S3 [Petunia sp.] Length = 143 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 4/127 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R L N TN+ + ++ +A+ IAQ I+ Q + FR + V+ Sbjct: 2 NEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKD 61 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 62 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 121 Query: 198 IKVYVSL 204 +KV++S Sbjct: 122 VKVWISY 128 >gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara] gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata] Length = 216 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 9/191 (4%) Query: 23 FARGSEYGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGK 79 FA S+ +++ + ++ E+L L + G + + + T II+ + R ++G+ Sbjct: 3 FAGKSKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGE 62 Query: 80 KGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 K I ++ + + L V + A A+S+ +L + + RRA Sbjct: 63 KARRIRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYG 122 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194 ++ M GA G +VI SG+L A+ +++ + +G + Q + +++ + G Sbjct: 123 VLRQIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQG 181 Query: 195 SCGIKVYVSLR 205 GIKV + L Sbjct: 182 VLGIKVKIMLP 192 >gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521] gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521] Length = 239 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 13/168 (7%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+ L + G + + TH II+ + ++G KG I ++ +K ++ Sbjct: 24 EFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGDKGRRIRELTALVQKRFKFPDN 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAKGCEVVISGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A +++ + + +D G GIKV + Sbjct: 144 RAA-RAKSMKFTDD---------FVDEAVRHVLMKQGVLGIKVKIMQG 181 >gi|272716568|gb|ACZ95576.1| ribosomal protein S3 [Araucaria heterophylla] Length = 731 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER--RVVFRRAMKRAVQ 139 ++ K+R LS+ TN+ ++ ++ +A+LIAQ + L+ + FR + V+ Sbjct: 603 NEVRKMRSLLSDGTNTNTFIAPVKIESVFQSASLIAQDTSFLLKSNIKRSFRSIFNQIVR 662 Query: 140 SAM---RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 S R G+++ SGRL GA+++RTE + IDY A T YG Sbjct: 663 SIPKVTRERVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGRKIDYAYAKVFTRYGIL 722 Query: 197 GIKVYVSLR 205 G+KV++S R Sbjct: 723 GVKVWISFR 731 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K NPI RL N + +S WF+ + YG L+++D+ R+Y + K Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSD-NYYGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGK 59 Query: 55 ILIERTHKNCRIIVYSARP 73 ++ + K R ++ P Sbjct: 60 CILHHSPK--RTFIHLFFP 76 >gi|302748547|gb|ADL63754.1| ribosomal protein S3 [Antirrhinum majus] Length = 467 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 305 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 363 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G G+++ Sbjct: 364 NTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSIFSQIVKKIPLVMKKGVTGIRICC 423 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGR GAE++RTEC G+ IDY A T YG G Sbjct: 424 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 467 >gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura] gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae] gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis] gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura] gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae] gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis] Length = 246 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens] gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens] gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens] Length = 230 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFQFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A +++ + +G + + +ID G GIKV + L Sbjct: 143 RAA-RAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIML 190 >gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes] Length = 234 Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 10/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + ++G+KG I ++ + Sbjct: 26 EFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGRRIRELTSVVQKRFGFKDG 85 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 86 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 145 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D T G GIKV + L + Sbjct: 146 RG-QRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGIKVKIMLPWDQNGKTGPK 204 Query: 212 DSTIPAAEHRVVEKDS 227 ++++ Sbjct: 205 KPLPDNVSVAEPKEEN 220 >gi|272716590|gb|ACZ95592.1| ribosomal protein S3 [Thuja koraiensis] Length = 645 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 488 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 547 Query: 121 AQQLERRVV-FRRAMKRAVQSAMR----------FGADGVKVIASGRLNGAELSRTECYL 169 + Q FR + + V+ + G G+++ GRL GAE++RTEC Sbjct: 548 SFQPRDGTRSFRSILWKIVRGLINSRALVMPKLRKGVGGIRICRPGRLKGAEIARTECME 607 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G+ T R IDY A T YG G+KV++ Sbjct: 608 YGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 643 >gi|302748905|gb|ADL63932.1| ribosomal protein S3 [Nothofagus moorei] Length = 476 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 5/167 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 ++ E ++ + G+ +++ RI + + R +++K+R LSN T + Sbjct: 311 RVMELIEKFIDLGGIGELIKGIEMMIERI-LRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 370 NTLIESIKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 SGR GAE++RTEC G+ IDY A T YG G+KV Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 476 >gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3P [Staphylothermus marinus F1] gi|152060907|sp|A3DNB3|RS3_STAMF RecName: Full=30S ribosomal protein S3P gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1] Length = 224 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 S + + + + E+L + K AG A + + +T R+++Y+ PG IIG+ G+ I Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66 Query: 86 KIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 K+ + ++++V+ VP P++NA ++A I + LE+ + +RR ++ M Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEA 126 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYV 202 GA G ++I SG+L +E +R E GR+ + +D A G G++V + Sbjct: 127 GAVGAEIIISGKLR-SERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185 Query: 203 SLRDEVSDSDSTIPAAEHRVV 223 I + + + Sbjct: 186 VRPHLKPPDYVEIKSVKPEEL 206 >gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga] gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva] Length = 216 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+K I ++ + Sbjct: 25 EFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARRIRELTSLVQKRFGFSSD 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+L Sbjct: 85 SVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQIMESGAKGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G + Q + +++ + G GIKV + L Sbjct: 145 R-AQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKVKIMLP 193 >gi|133907837|gb|ABO42378.1| ribosomal protein S3 [Elatine triandra] gi|302748725|gb|ADL63843.1| ribosomal protein S3 [Elatine hexandra] Length = 458 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 299 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 357 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+LIAQ I+ QL ++R FR + V+ M+ G +G+++ Sbjct: 358 NTLINSVKIQSVYQSASLIAQDISFQLRKKRRSFRSIFNKIVRDIPLVMKKGVEGIRICC 417 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 418 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 458 >gi|17554770|ref|NP_498349.1| Ribosomal Protein, Small subunit family member (rps-3) [Caenorhabditis elegans] gi|1350989|sp|P48152|RS3_CAEEL RecName: Full=40S ribosomal protein S3 gi|9802859|gb|AAF99870.1| Ribosomal protein, small subunit protein 3, confirmed by transcript evidence [Caenorhabditis elegans] Length = 247 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 82/208 (39%), Gaps = 23/208 (11%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T +I+ + R ++G++G I+++ + Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205 G + ++ +++G + + +I + G GIKV + L Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPR 203 Query: 206 -------DEVSDSDSTIPAAEHRVVEKD 226 V + +P H +++ Sbjct: 204 NALPDHVQIVEPQEEVLPKEPHSQHKEE 231 >gi|272716626|gb|ACZ95619.1| ribosomal protein S3 [Chamaecyparis pisifera] Length = 635 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LS TN+ + ++ +A+ IAQ I Sbjct: 478 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 537 Query: 121 AQQLERRVV-FRRAMKRAVQSAMR----------FGADGVKVIASGRLNGAELSRTECYL 169 + Q FR + + V+ + G G+++ GRL GAE++RTEC Sbjct: 538 SFQPRDGTRSFRSILWKIVRGLINSRALVMPKLRKGVGGIRICRPGRLKGAEIARTECRE 597 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G+ T R IDY A T YG G+KV++ Sbjct: 598 YGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 633 >gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis] Length = 213 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + + ++G+KG I ++ +K + S Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLGEKGRRIRELTSVVQKRFSFPES 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKLGPK 201 Query: 212 DST 214 Sbjct: 202 RPL 204 >gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3P [Pyrobaculum islandicum DSM 4184] gi|152060899|sp|A1RV98|RS3_PYRIL RecName: Full=30S ribosomal protein S3P gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184] Length = 217 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 10/183 (5%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++ Sbjct: 11 YKKILEENKKKWMIKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVK 70 Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 +I L N E + V+++ PE+ +IA IA + + V FRR M AV+ Sbjct: 71 EISNILVNKLGVENPQIDVIDVSKIEAPEMFPKVIAYRIANAMAKGVRFRRVMFVAVRQL 130 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 M GA G +++ SG+L+ E +R E G++ A + G GI+ Sbjct: 131 MEAGAKGFEIVVSGKLS-TERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189 Query: 200 VYV 202 V + Sbjct: 190 VRI 192 >gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens] gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens] gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens] gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens] Length = 231 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + T II+ + R ++G+KG I ++ +K Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFQFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A +++ + +G + + +ID G GIKV + L Sbjct: 143 RAA-RAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIML 190 >gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii] Length = 230 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98 E L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPPD 82 Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L Sbjct: 83 SVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A +++ + +G + + +ID G GIKV + Sbjct: 143 RAA-RAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQGVLGIKVKIMK 190 >gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori] gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori] Length = 243 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192 >gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis] Length = 239 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 13/202 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L D E L L + G + + I ++ II+ + RP IIG+ Sbjct: 14 ADGVFYAEL---D----ELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENSRR 66 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + + + L V + + A A+++ +L + RRA ++S Sbjct: 67 INELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVIRS 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGI 198 A+ GA G +VI SG+L + + + EG + + +D T G G+ Sbjct: 127 ALEAGAKGCEVIVSGKLR-QQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQGMLGV 185 Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220 KV + + A Sbjct: 186 KVRIMKPTDPEGRLGPKKALPD 207 >gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni] gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni] Length = 244 Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 195 Query: 215 IPAAEHRVVE 224 + + Sbjct: 196 NKIGPKKPLP 205 >gi|328541266|gb|AEB21857.1| ribosomal protein S3 [Drucella integristipula] Length = 369 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKRSFRQICRSIFK 308 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE++RTE G L IDY A T YG G+ Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368 Query: 199 K 199 K Sbjct: 369 K 369 >gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta] Length = 257 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 39 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 98 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 99 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 158 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L G + +++ +++G + + +++ T G GIKV + D Sbjct: 159 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 212 Query: 215 IPAAEHRVVE 224 + + + Sbjct: 213 GKSGPKKPLP 222 >gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius] Length = 221 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 6/185 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE---KIRKKLSNMTNS 97 E+L L + G + I + T II+ + ++G+KG I + +K Sbjct: 9 EFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQKRFQFAEG 68 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L +V + A A+S+ +L + RRA ++ M GA G +++ SG+L Sbjct: 69 KLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGCEIVVSGKL 128 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + ++D T G G+KV + L + Sbjct: 129 RG-QRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKVKIMLPWDTLGKIGLK 187 Query: 216 PAAEH 220 Sbjct: 188 KPLPD 192 >gi|302749039|gb|ADL63999.1| ribosomal protein S3 [Spathiphyllum wallisii] Length = 481 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88 L+ +D + E ++ + G+ ++ I + + G +++K+R Sbjct: 306 NLMGKDKALAELIEKFIDLGGIGELNKGI---EMMIEIILRNRRIPYGYNSYLNEVQKMR 362 Query: 89 KKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRF 144 LSN T++ + ++ +A+ IAQ I+ Q R FR + + + M Sbjct: 363 SFLSNRTHTASALIESVKIKSVYQSASPIAQDISFQP-RNNSFRSIFSHIVKDIPLIMPK 421 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 422 GVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481 >gi|254756771|ref|ZP_05208800.1| 30S ribosomal protein S3 [Bacillus anthracis str. Australia 94] Length = 55 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVE 55 >gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus] Length = 238 Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 11/196 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 24 EFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + +++ G GIKV + L ++ Sbjct: 144 RG-QRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVLGIKVKIMLPWDPVGKIGPK 202 Query: 212 DS-TIPAAEHRVVEKD 226 + + E++ Sbjct: 203 NPLPDNVSITEPKEEE 218 >gi|270266464|gb|ACZ65154.1| Rps3 [Eryngium maritimum] Length = 67 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 42/67 (62%) Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG GIK+ Sbjct: 1 ILTADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKI 60 Query: 201 YVSLRDE 207 ++ + E Sbjct: 61 WIFIDGE 67 >gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae] gi|187040329|emb|CAP20914.1| CBR-RPS-3 protein [Caenorhabditis briggsae AF16] Length = 247 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 82/208 (39%), Gaps = 23/208 (11%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T +I+ + R ++G++G I+++ + Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205 G + ++ +++G + + +I + G GIKV + L Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGMNGPR 203 Query: 206 -------DEVSDSDSTIPAAEHRVVEKD 226 + + IP H +++ Sbjct: 204 NALPDHVQIMEPQEEVIPKEPHSQHKEE 231 >gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506] gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506] Length = 227 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 6/172 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95 ++E+ + L G + + +II+ A+P IG+K +++ + + + Sbjct: 31 LKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQFQHLVAQRLEVP 90 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + + + V +V + + A + A I +++ V +RR++ A+++ GA G ++I SG Sbjct: 91 DENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRHSGAQGCQIIVSG 150 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +L G + +++ + +G + ++ +ID G A ET G GI+V + L Sbjct: 151 KLKG-QRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQGVIGIQVRIMLP 201 >gi|302749025|gb|ADL63992.1| ribosomal protein S3 [Schoepfia schreberi] Length = 470 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + G+ G +++K+R LSN T Sbjct: 307 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 363 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 364 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 423 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 SGRL GAE++RTEC G+ IDY A T YG G+ Sbjct: 424 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGV 470 >gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior] Length = 242 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L G + +++ +++G + + +++ T G GIKV + D Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197 Query: 215 IPAAEHRVVE 224 + + + Sbjct: 198 GKSGPKKPLP 207 >gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis] gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis] Length = 246 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior] Length = 242 Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L G + +++ +++G + + +++ T G GIKV + D Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197 Query: 215 IPAAEHRVVE 224 + + + Sbjct: 198 GKSGPKKPLP 207 >gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis] gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis] Length = 240 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 11/191 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + + ++D G GIKV + D T Sbjct: 143 RG-QRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 196 Query: 216 PAAEHRVVEKD 226 + + Sbjct: 197 KTGPKKPLPDQ 207 >gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum] Length = 249 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + RT +I+ + R ++G++G I ++ + Sbjct: 25 NFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGERGRRIRELTSVVQKRFGFAEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M A G +VI SG+L Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESSAQGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + Q + +I + G GIKV + L Sbjct: 145 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 193 >gi|328541216|gb|AEB21832.1| ribosomal protein S3 [Hygrolembidium rigidum] Length = 371 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 1/122 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SG LNGAE+++TE G L IDY A T YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGXLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369 Query: 199 KV 200 KV Sbjct: 370 KV 371 >gi|302748659|gb|ADL63810.1| ribosomal protein S3 [Clidemia petiolaris] Length = 464 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T + Sbjct: 300 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRQIPYGYNSYLNEVKKMRSLLSNRTKT 358 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ Q ++ FR + + + M+ G +G+++ Sbjct: 359 NTNIESVKIKSVYQSASPIAQDISFQPRNKKRSFRSILTKIVKDIPLVMKKGVEGIRICC 418 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 419 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 464 >gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum] gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum] Length = 245 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 12/196 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + I++ + R ++G KG I ++ +K + + Sbjct: 24 EFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGDKGRRIRELTSLIQKRFDFKDK 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 AVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR----DEVSD 210 G + +++ +++G + + + DY T G GIKV + L ++ Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNVATRHVLLRQGVLGIKVKIMLPWDQTGKLGP 201 Query: 211 SDSTIPAAEHRVVEKD 226 +++ Sbjct: 202 KKPLPDNVSVAEPKEE 217 >gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus] Length = 242 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L G + +++ +++G + + +++ T G GIKV + D Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197 Query: 215 IPAAEHRVVE 224 + + + Sbjct: 198 GKSGPKKPLP 207 >gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus] Length = 272 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G A + + R +I+ + R ++G++G I ++ + Sbjct: 45 NFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGRRIRELTAVVQKRFGFNVG 104 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L +V + A +S+ +L + RRA ++ M A G ++I SG+L Sbjct: 105 QVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLRFIMESQAKGCEIIVSGKL 164 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ +++G + + ++ + G GIKV + D Sbjct: 165 RG-QRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGIKVKIM-----LPHDPEG 218 Query: 216 PAAEHRVVE 224 + Sbjct: 219 KIGPRNPLP 227 >gi|254458781|ref|ZP_05072205.1| 30S ribosomal protein S3 [Campylobacterales bacterium GD 1] gi|207084547|gb|EDZ61835.1| 30S ribosomal protein S3 [Campylobacterales bacterium GD 1] Length = 75 Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 ++RTE YLEGRVPL TLRA IDYG A A T YG G+KV++ + EV A E + Sbjct: 1 MARTEWYLEGRVPLHTLRAKIDYGFAEAHTTYGIIGVKVWIF-KGEVLTKGIPAEAKEEK 59 Query: 222 VVEKD 226 +++ Sbjct: 60 QEKQE 64 >gi|302749125|gb|ADL64042.1| ribosomal protein S3 [Zamia integrifolia] Length = 362 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 4/162 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L L G LI+ II+ + R +++K+R L + TN+ + Sbjct: 201 LMEKLIDLGGIGELIKGIGMMIEIILRNRRIPYGYNYYLNEVQKMRSLLPDGTNTNTSIG 260 Query: 103 VNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS---AMRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ Q FR + V+ AM G+++ SGR Sbjct: 261 SVKIESVYQSASLIAQDISFQPRNGTGSFRSIFGQIVRDMTCAMPKRVKGIRICRSGRSK 320 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 GAE++RTEC G+ ID+ A T YG G+KV Sbjct: 321 GAEIARTECREYGKTSCNVFHQKIDHAFAKVYTRYGILGVKV 362 >gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii] Length = 188 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 10/177 (5%) Query: 47 LKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSV 103 L + G + + + T II+ + R ++G+KG I ++ +K N + L Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + + Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRA 119 Query: 164 RTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 ++ +++G + ++D G GIKV + L ++ Sbjct: 120 KSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKRPL 176 >gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener] gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener] gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener] gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] Length = 214 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 83/191 (43%), Gaps = 6/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ + + ++G+KG I ++ ++ + Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + + +D T G+ G+KV + L + + + + Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQNEEEIL 200 Query: 216 PAAEHRVVEKD 226 P + K+ Sbjct: 201 PDVITVLEPKE 211 >gi|302748957|gb|ADL63958.1| ribosomal protein S3 [Pinguicula vulgaris] Length = 472 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ L + ++ I + + + G +++K+R LSN T Sbjct: 308 KVMELIEKCLNLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM---RFGADGVKV 151 + ++ ++ +A+ IAQ I+ QL + FR + V++ + G G+++ Sbjct: 365 ATNTNIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSQIVKNIPLVTKKGVTGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472 >gi|302748615|gb|ADL63788.1| ribosomal protein S3 [Cananga odorata] Length = 460 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 5/169 (2%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 I E + + + + I+ II+ + +++KIR LSN T + Sbjct: 293 IGELIDKFIDLGRIGEF-IKGIEMMREIILRNRIIPYRYNSYLNEVQKIRSLLSNRTKTN 351 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIAS 154 + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ S Sbjct: 352 TLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICCS 411 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 GR GAE++RT+C G+ IDY A T YG G+KV +S Sbjct: 412 GRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 460 >gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3 [Drosophila yakuba] Length = 215 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + V Sbjct: 198 NKIGPKKPVP 207 >gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi] gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi] Length = 250 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + RT II+ + R ++G++G I ++ + Sbjct: 26 NFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGRRIRELTSVVQKRFGFADG 85 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M A G +VI SG+L Sbjct: 86 TVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKL 145 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + Q + +I + G GIKV + L Sbjct: 146 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 194 >gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 270 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+ L + G + + I T + II+ + + ++G+KG I ++ + + Sbjct: 25 EFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAVLGEKGRRIRELTSVIQKRFGYPEN 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L RRA ++ M GA G +++ SG+L Sbjct: 85 SIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRACYGVLRFIMDSGAQGCEIVVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ +++G + + ++ + G GIKV + D Sbjct: 145 RG-QRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLRQGVLGIKVKIM-----LPHDPKE 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 GKGVKKPLP 207 >gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus] Length = 206 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVIQKRFNFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + ++D G GIKV + L Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGGLGIKVKIMLP 191 >gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa] gi|307766296|gb|EFO25530.1| 40S ribosomal protein S3 [Loa loa] Length = 249 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + RT II+ + R ++G++G I ++ + Sbjct: 25 NFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGRRIRELTSVVQKRFGFADG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M A G +VI SG+L Sbjct: 85 TVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + Q + +I + G GIKV + L Sbjct: 145 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 193 >gi|302748820|gb|ADL63890.1| ribosomal protein S3 [Ipomoea batatas] Length = 482 Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 5/166 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+ Sbjct: 318 KVMELIENFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 376 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ FR + V+ M+ G +G+++ Sbjct: 377 NTLIESVKIKSVYQSASPIAQDISFQPRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRICC 436 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGRL GAE++RTEC G+ IDY A T YG G+K Sbjct: 437 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 482 >gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri] Length = 240 Score = 91.6 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L + G + + + T +N II+ + R ++G+KG I ++ +K + + Sbjct: 23 EFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFSFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 TVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + +++ G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPWDPNGKLGPK 201 Query: 212 DST 214 Sbjct: 202 RPL 204 >gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis] Length = 244 Score = 91.6 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 23 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 195 Query: 215 IPAAEHRVVE 224 + + Sbjct: 196 NKIGPKKPLP 205 >gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba] gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba] Length = 246 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis] Length = 241 Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + + DY T G GIKV + L Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192 >gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia] gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans] gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia] gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans] Length = 246 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|253807616|gb|ACT36194.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesi] Length = 384 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 7/172 (4%) Query: 40 REYLQ-CHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 + Y++ L + ++K L + I YS P L I KK + +LS ++ Sbjct: 214 KNYIKRKFLFHSYLSKNLRLNPNIFYNIQSYSINPKLNI-KKRMIQNHLENQLSTYSHLN 272 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV-QSAMRFGADGVKVIASGRL 157 + L+ + +AT +A I LER++ F R + + Q G+++I SGRL Sbjct: 273 VELTPFVLSNDWQSATFLADEIVFFLERKIGFLRIKNQLLSQLNRYPWIKGLRIICSGRL 332 Query: 158 ----NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++ + E G L T IDY + A T +GS G+KV++ + Sbjct: 333 GFKGKKSQRASQEYVKYGETSLNTFDRKIDYASKTAYTPFGSVGVKVWICYK 384 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 5/112 (4%) Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQKINPI RL N +S WF+ Y L DL + +Y +K + + + Sbjct: 1 MGQKINPIALRLSHGNRLKDSSWFSNKYFYKKSLILDLLLMKYYNDFIKHFKLPQPRLSI 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111 ++ +I + I K + ++ + N+ + + + + + + Sbjct: 61 QYQFHQINI----QPFICIPKQSRFQRSKFFRLNINQNLLKKTSFKNKRYPL 108 >gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404] gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404] Length = 248 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T IIV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+ + +L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis] gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis] Length = 246 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|223927392|gb|ACN23317.1| ribosomal protein S3 [Halimeda pygmaea] Length = 144 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 4/135 (2%) Query: 1 MGQKINPILFRLGVNCT--WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG+ KI I Sbjct: 1 MGQKVHPLGFRLGITQHQLHLSQWYASKKYYSKYVLEDNFLRTILTKKYVRAGIEKIEIS 60 Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN--EVPKPEINATLI 116 R +N IV A+ I+G KG +I+K KKL E + K +I A+ I Sbjct: 61 RKIENHLEIVIQAQKPTILGVKGLEIQKEIKKLIYKYRGENGKLKVVLYIMKSKITASSI 120 Query: 117 AQSIAQQLERRVVFR 131 A I LE+R+ ++ Sbjct: 121 ADFIIANLEKRIPYK 135 >gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi] gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi] Length = 246 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803] gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803] gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15] Length = 217 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 13/205 (6%) Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 Y L++ + ++ E+ L AG A + RT + +I+ A P +++G + Sbjct: 14 YSKYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLH 73 Query: 86 KIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 KI ++ V+++ K ++A ++ ++ +LE + RRA +++AM Sbjct: 74 KIEYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAM 133 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKV 200 R GA G +VI +G+L A+ +R + EG R + T + G G+KV Sbjct: 134 RAGAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192 Query: 201 YVS----LRDEVSDSDSTIPAAEHR 221 + + D + + Sbjct: 193 RIYNPNIRGAVMPDKIEIGAFSRQK 217 >gi|50427849|ref|XP_462537.1| DEHA2G22770p [Debaryomyces hansenii CBS767] gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii] Length = 239 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T +IV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+++ +L + RRA ++ Sbjct: 67 IHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q + ID G GI Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|156553282|ref|XP_001599651.1| PREDICTED: similar to ribosomal protein S3e [Nasonia vitripennis] Length = 242 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 6/191 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T + II+ + ++G+KG I ++ +K N + Sbjct: 24 EFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEKGRRIRELTSVVQKRFNFKDH 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + + +++ T G GIKV + L + + + Sbjct: 144 RG-QRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVLGIKVKIMLPWDPNGKNGPK 202 Query: 216 PAAEHRVVEKD 226 V+ ++ Sbjct: 203 KPLPDNVIVQE 213 >gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis] Length = 221 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 10/173 (5%) Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVP 107 G + + + T II+ + R ++G+KG I ++ + + L +V Sbjct: 4 GYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVA 63 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167 + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ Sbjct: 64 TRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QCAKSMK 122 Query: 168 YLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 +++G + ++D T G GIKV + L ++ Sbjct: 123 FVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 175 >gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis] Length = 237 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 84/212 (39%), Gaps = 26/212 (12%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + II+ + R ++G KG I ++ +K + + Sbjct: 23 EFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFSFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRYIMESGARGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205 G + +++ +++G + ++D G GIKV + L Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQGVLGIKVKIMLPFDVTGKSGPR 201 Query: 206 ----------DEVSDSDSTIPAAEHRVVEKDS 227 + + P +E + + ++ Sbjct: 202 KPLPDTVSVAEPKEEDIPANPFSEPKAAKPEA 233 >gi|110225654|ref|YP_665660.1| ribosomal protein S3 [Nephroselmis olivacea] gi|6066169|gb|AAF03187.1|AF110138_19 ribosomal protein S3 [Nephroselmis olivacea] Length = 309 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 7/130 (5%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR----VVFRRAMK 135 K + ++++ ++ + + + + +A + I QLE++ ++ + MK Sbjct: 183 KDSFLQQVESSINKNVDCSTQVFLMKSSNSLSSANFFVKEITYQLEKKSSINQIWNQVMK 242 Query: 136 RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 + +Q G+++ +GR+NG E++RTE G+ L +L +DY + A T +G Sbjct: 243 KVIQ---TPSIQGIRLSVAGRINGVEMARTEIRKYGQTSLHSLSNKMDYACSHAYTPFGI 299 Query: 196 CGIKVYVSLR 205 G+K+++ R Sbjct: 300 LGVKIWICFR 309 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 7/168 (4%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR---GSEYGALLHEDLKIREYLQCHLKQAGVAKILI 57 MGQK+NPI RL +N + + WF+ LH I E + + + + Sbjct: 1 MGQKVNPISLRLPINRSVDCLWFSDIHSTKLMIQYLHFHKYI-ESIFQVTSHLNMGRFFL 59 Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 + K + +I K ++K N+ + Sbjct: 60 DVFPKKWTLSCLVHERKNLISKGTRFLKKSAFFNKNVHPLGLTNLN---SAGVFAIAYQQ 116 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 I +L R + A+QS ++ + G + Sbjct: 117 MYIQSKLSRIYSPQLFFLSALQSFLQHNYKVASLCLESTNQGKQRKNF 164 >gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314] gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314] gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314] gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314] gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1] Length = 251 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T +IV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+++ +L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3P [Pyrobaculum aerophilum str. IM2] gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2] Length = 196 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 8/197 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKLSNM 94 I+E+L+ L + G I +T RI++Y+ RP IIG+KG +I I + Sbjct: 1 MIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGV 60 Query: 95 TNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 N +I + ++++ PE+ ++A IA + + V FRR M A++ M GA G +++ Sbjct: 61 ENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVV 120 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 SG+L+ E +R E G++ A + G GI+V ++ Sbjct: 121 SGKLS-TERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRIAPATLQYSD 179 Query: 212 D-STIPAAEHRVVEKDS 227 + P V++ S Sbjct: 180 EYKIKPPVRPEAVQQQS 196 >gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator] Length = 242 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 7/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 84 QNVELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 L G + +++ +++G + + +++ T G GIKV + L Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIMLP 193 >gi|297527401|ref|YP_003669425.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710] gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710] Length = 225 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 4/201 (1%) Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85 S + + + + E+L + K AG A + + +T R+I+Y+ PG +IG+ G+ I Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIR 66 Query: 86 KIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144 K+ + ++++V+ VP P++NA ++A I + LE+ + +RR ++ M Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARVVAFRIVRALEKEIPYRRVAMAMLRRIMEA 126 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYV 202 GA G ++I SG+L +E +R + GR+ + +D A G G++V + Sbjct: 127 GAVGAEIIISGKLR-SERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185 Query: 203 SLRDEVSDSDSTIPAAEHRVV 223 I + + + Sbjct: 186 VRPHLKPPDYVEIKSVKPEEL 206 >gi|126132980|ref|XP_001383015.1| hypothetical protein PICST_82366 [Scheffersomyces stipitis CBS 6054] gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 242 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T +IV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+ + +L + RRA ++ Sbjct: 67 IHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q + ID G GI Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|288191116|gb|ADC43911.1| ribosomal protein S3 [Pangium edule] Length = 478 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 316 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 374 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++ Sbjct: 375 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 434 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 435 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 478 >gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster] gi|548856|sp|Q06559|RS3_DROME RecName: Full=40S ribosomal protein S3 gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila melanogaster] gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster] gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster] gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct] gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct] Length = 246 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri] Length = 205 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T +I+ + R ++G++G I+++ + Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + ++ +++G + + +I + G GIKV + L Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLP 193 >gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex] Length = 242 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 11/188 (5%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98 +L L + G + + + II+ + R ++G+KG I ++ + Sbjct: 25 FLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFQEGT 84 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLR 144 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216 G + +++ +++G + + ++D G GIKV + D Sbjct: 145 G-QRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQGVLGIKVKIM-----LPWDPNNK 198 Query: 217 AAEHRVVE 224 R + Sbjct: 199 NGPKRPLP 206 >gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514] gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514] Length = 222 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 10/183 (5%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG Sbjct: 13 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 72 Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ I + N +I + V+++ PE+ ++A IA + + V FRR M A++ Sbjct: 73 EVSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQL 132 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 GA G +++ SG+L+ E +R E G++ A + G GI+ Sbjct: 133 TEAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 191 Query: 200 VYV 202 V + Sbjct: 192 VRI 194 >gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4] gi|74834663|sp|P90526|RS3_DICDI RecName: Full=40S ribosomal protein S3 gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum] gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4] Length = 218 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98 + + K G + + ++ + II+ +++ ++G I+++ + N Sbjct: 27 FTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGT 86 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L ++ + A A+S+ +L + R+A V M GA G +VI SG+L Sbjct: 87 VVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLR 146 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G + Q + ID+ G+ G+KV + L Sbjct: 147 -AQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLP 194 >gi|172046048|sp|A4WIY8|RS3_PYRAR RecName: Full=30S ribosomal protein S3P Length = 220 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 10/183 (5%) Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82 Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG Sbjct: 11 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70 Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ I + N +I + V+++ PE+ ++A IA + + V FRR M A++ Sbjct: 71 EVSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQL 130 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199 GA G +++ SG+L+ E +R E G++ A + G GI+ Sbjct: 131 TEAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189 Query: 200 VYV 202 V + Sbjct: 190 VRI 192 >gi|302748842|gb|ADL63901.1| ribosomal protein S3 [Lilium sp. Qiu 96072] Length = 466 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 7/172 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ + LI+ II+ + R ++ K+R LSN TN+ Sbjct: 296 KVMELIDKFIDLGGI-RELIKGIEIMIEIILRNIRIPYGYNSYLNEVHKMRSFLSNRTNT 354 Query: 98 EIH--LSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKV 151 + ++ +A+LIAQ I+ Q + F + V+ M G G+++ Sbjct: 355 SFGPLIESVKIKSVYQSASLIAQDISFQPRNNKRSFHSIFSQIVKDIPFIMPKGVPGIRI 414 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 SGRL GAE++RTEC G+ IDY A T YG G+KV +S Sbjct: 415 CCSGRLGGAEIARTECGKFGKTSRNVFNHKIDYAPAEVSTRYGISGVKVRIS 466 >gi|302748865|gb|ADL63912.1| ribosomal protein S3 [Marcgravia rectiflora] Length = 474 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 9/168 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRTIPYGYNYYLNEVKKMRSLLSNRA 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ Q + FR + +Q M+ G +G+++ Sbjct: 367 KTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKNIQLVMKKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGXSGVK 474 >gi|255590603|ref|XP_002535312.1| 60S ribosomal protein L16, putative [Ricinus communis] gi|223523477|gb|EEF27073.1| 60S ribosomal protein L16, putative [Ricinus communis] Length = 668 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 377 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 435 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 436 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 495 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 496 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 539 >gi|241958636|ref|XP_002422037.1| ribosomal protein, small subunit, putative [Candida dubliniensis CD36] gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis CD36] Length = 254 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T +IV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+++ +L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster] Length = 253 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 32 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 91 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 92 RIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 151 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 152 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 204 Query: 215 IPAAEHRVVE 224 + + Sbjct: 205 NKIGPKKPLP 214 >gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera] Length = 242 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 9/185 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96 E+L L + G + + + T II+ + ++G+KG I ++ + N Sbjct: 24 EFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKET 83 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+ Sbjct: 84 QNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143 Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 L G + +++ +++G + + +++ T G GIKV + L T Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIMLP--YDPHGKT 200 Query: 215 IPAAE 219 P Sbjct: 201 GPKKP 205 >gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta] gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta] Length = 246 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V I A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|302748577|gb|ADL63769.1| ribosomal protein S3 [Berberidopsis beckleri] Length = 468 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + +Q M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIQLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 SGR GAE++RTEC G+ P IDY A T YG Sbjct: 427 SGRSKGAEIARTECGKYGKTPRNVFNQKIDYAPAEVSTRYGI 468 >gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum] Length = 219 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98 + + K G + + +++ + I + +++ I+G+ + ++ + Sbjct: 28 FTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGENARRVHELCSLVQKRFGFKEGA 87 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + + +V + A A+S+ +L + RRA + M GA G +VI SG+L Sbjct: 88 VTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAILHQVMTKGAKGCEVIVSGKLR 147 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G + Q + +D+ G+ G+KV + L Sbjct: 148 -AQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTLGVKVAIMLP 195 >gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis] Length = 330 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 9/189 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99 + L + G + + + +T + II+ + R ++G+KG I ++ + N E Sbjct: 117 NFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRRIRELTSLVQKRFNLPEE 176 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 L +V + + A +S+ +L + RRA ++ M A G +VI SG+L G Sbjct: 177 SLYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRYIMESQAKGCEVIVSGKLRG 236 Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 + +++ +++G + +++ G G GIKV + D Sbjct: 237 -QRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQGVIGIKVKIM-----LPHDPKGVY 290 Query: 218 AEHRVVEKD 226 + + Sbjct: 291 GPKKPLPDS 299 >gi|229315926|ref|YP_002860152.1| ribosomal protein S3 [Micromonas sp. RCC299] gi|226431211|gb|ACO55616.1| ribosomal protein S3 [Micromonas sp. RCC299] Length = 319 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 3/165 (1%) Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 + A + K + + + + I L+ T ++ + Sbjct: 154 RNKTMAAILLKKNRNMYTHKKQFSILNTSEQKTNQIITKYVSHIENVLALYTQKKVVWTP 213 Query: 104 NEVPKPEINATLIAQSIAQQLE--RRVVFRRAMKRAV-QSAMRFGADGVKVIASGRLNGA 160 ++ +A+ +A IA Q E ++ FR + + Q G+++ +GR+ GA Sbjct: 214 YKIKNAFTSASFVAHYIALQFEQNKKKPFRSIFQDVLKQCVKTPQLVGIRIAIAGRIGGA 273 Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 E++R E G+ L IDY A T +G G+KV++S + Sbjct: 274 EMARVEQTQYGQTSLHVFSHTIDYHATSAYTPHGLLGVKVWMSFK 318 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M QKI P RL N +++ WF+ YG+LL + L I++++ + G L Sbjct: 1 MAQKIAPAALRLYTNKKFDASWFSD-RMYGSLLQKTLNIKKFVHSIFESIGTKTALSHVQ 59 Query: 61 HKNCRIIV--YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105 I + + P ++ + + + E +L+ E Sbjct: 60 ANPQHIYIQSFFCSPRVMNQRLRKKYVALESNTQFLHPFEAYLTAKE 106 >gi|302748609|gb|ADL63785.1| ribosomal protein S3 [Calyptrotheca somalensis] Length = 476 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 5/165 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 313 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSFLSNRTKT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ R FR+ + V++ M+ G +G+++ Sbjct: 372 NTKIESKKIKSVYQSASPIAQDISFQPKKKRRSFRKIFSKIVKNIPLVMKKGVEGIRISC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 SGRL GAE++RTEC G+ L IDY +A T YG G+ Sbjct: 432 SGRLEGAEIARTECGKYGKTSCNVLDQKIDYASAEVSTRYGILGV 476 >gi|73987942|ref|XP_860381.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 6 [Canis familiaris] Length = 231 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 16/180 (8%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG---- 78 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 P+ + A A+S+ +L + RRA ++ M GA G +V+ SG+L G Sbjct: 79 -----FPEGSLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 132 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 + +++ +++G + + ++D G GIKV + L ++ Sbjct: 133 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 192 >gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299] gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299] Length = 233 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G + L+E L IRE L + G + + + T II+ + R ++G+KG Sbjct: 14 ADGVFFAE-LNE-LLIRE-----LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 66 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + + L +V + A A+S+ +L + RRA ++ Sbjct: 67 IRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L G + + + +G + +R +I+ G G+ Sbjct: 127 IMENGAKGAEVVVSGKLRG-QRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQGCVGV 185 Query: 199 KVYVSL 204 KV + L Sbjct: 186 KVKIML 191 >gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545] Length = 232 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + + L +V + A A+S+ +L + RRA ++ Sbjct: 66 IRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA G +V+ SG+L G + + + +G + +R +I+ G GI Sbjct: 126 IMENGAKGCEVVVSGKLRG-QRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQGCVGI 184 Query: 199 KVYVSL 204 KV + L Sbjct: 185 KVKIML 190 >gi|302748749|gb|ADL63855.1| ribosomal protein S3 [Galium sp. Qiu 95025] Length = 459 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 10/170 (5%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKL 91 ED K+ E ++ + + ++ I + + G +++K+R L Sbjct: 294 KED-KVMELIEKFIDLGRIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 349 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147 SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G + Sbjct: 350 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFNKIVKDIPLVMKGGVE 409 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 GV++ SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 410 GVRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 459 >gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239] gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239] Length = 247 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T IIV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + V + ++A + A+++ +L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q ID G G+ Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGV 185 Query: 199 KVYVSL 204 KV + Sbjct: 186 KVKIMK 191 >gi|163783899|ref|ZP_02178873.1| ribosomal protein S03 [Hydrogenivirga sp. 128-5-R1-1] gi|159880820|gb|EDP74350.1| ribosomal protein S03 [Hydrogenivirga sp. 128-5-R1-1] Length = 52 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 35/52 (67%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV 52 MGQK++PI RLG++ W S+W+A Y LHED+KIR +++ + AG+ Sbjct: 1 MGQKVHPIGLRLGISSDWQSKWYADKKNYAKTLHEDIKIRNFIKEKYRAAGI 52 >gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas] Length = 187 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 6/165 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 +L L + G + + + T II+ + R ++G+KG I ++ + N Sbjct: 24 NFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 TVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200 G + +++ +++G + + ++D G GIKV Sbjct: 144 RG-QRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKV 187 >gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii] gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii] Length = 236 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 23/218 (10%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR------AM 134 I ++ +K + S + L +V + A A+S+ +L + RR A Sbjct: 66 IRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLYFVRAC 125 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETA 192 ++ M GA G +VI SG+L A+ +++ + +G + + ID Sbjct: 126 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLR 184 Query: 193 YGSCGIKVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226 G GIKV + L + + S +V +++ Sbjct: 185 QGVLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 222 >gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC 6260] gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC 6260] Length = 238 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 13/186 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T +IV ++ ++G++G Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K ++ I + + + ++A + A+++ +L + RRA ++ Sbjct: 67 IHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLRF 126 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 AM GA GV+V+ SG+L A ++++ Y +G + Q ID G GI Sbjct: 127 AMAAGAKGVEVVISGKLRAA-RAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185 Query: 199 KVYVSL 204 +V + Sbjct: 186 RVKIMK 191 >gi|133907787|gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii] Length = 467 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467 >gi|126654428|ref|ZP_01726168.1| 30S ribosomal protein S3 [Bacillus sp. B14905] gi|126589115|gb|EAZ83312.1| 30S ribosomal protein S3 [Bacillus sp. B14905] Length = 53 Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAK 54 MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSK 53 >gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum] gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum] Length = 218 Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 6/169 (3%) Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98 + + K G + + ++ + II+ +++ ++G I+++ + N Sbjct: 27 FTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGT 86 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + L ++ + A A+S+ +L + R+A V M GA G +VI SG+L Sbjct: 87 VVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLR 146 Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G + Q + +D+ G+ G+KV + L Sbjct: 147 -AQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQGTLGVKVAIMLP 194 >gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 253 Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 17/212 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G A + + T +I+ + R ++G+ Sbjct: 9 ADGVFYAEL-------NELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNRR 61 Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ + N + L V + A A+S+ +L + RRA V+ Sbjct: 62 IRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVRF 121 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M A G +V+ +G+L G + ++ + +G + + + D G GI Sbjct: 122 VMEAQAKGCEVVVTGKLRG-QRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQGVIGI 180 Query: 199 KVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226 KV + L + ++ +++ Sbjct: 181 KVSIMLPQDPKGQMGPKIPLDDVVTILEPKEE 212 >gi|33322140|gb|AAQ06790.1|AF496131_1 30s ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis] Length = 71 Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +GRLNGA+++R E + EG VPL TLRA IDY A T YG G+KV+++ + + + Sbjct: 1 AGRLNGADIARREWHTEGSVPLHTLRADIDYAWVNAFTTYGEIGVKVWINRGEILPGRKN 60 Query: 214 TIPAAEHRVVEK 225 PA + +K Sbjct: 61 Q-PAKRSKGGKK 71 >gi|302748587|gb|ADL63774.1| ribosomal protein S3 [Bougainvillea alba] Length = 468 Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGRL GAE++RTEC G+ L IDY +A T YG Sbjct: 426 SGRLEGAEIARTECRKYGKTSCNVLHKKIDYASAEVSTRYGIL 468 >gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus] Length = 243 Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ +++G + + ++D + GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHPSVPFSVLGIKVKIMLPWDPSGKIGPK 201 Query: 212 DST 214 Sbjct: 202 KPL 204 >gi|272716661|gb|ACZ95645.1| ribosomal protein S3 [Welwitschia mirabilis] Length = 744 Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113 ++I KN RI P K + L N TN+ + ++P +A Sbjct: 575 GMMIWSLLKNRRI------PYGYNYYNNEVRYKRVQMLCNRTNTSYFIGSVKIPYNYQSA 628 Query: 114 TLIAQSIAQQLERRVVFR----------RAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +LIAQ I+ QL R R R + V + G+++ SGRL GAE++ Sbjct: 629 SLIAQDISNQLRGRNRTRSFRSLVSYLVRFVPVRVNPSASVRVRGIRICCSGRLKGAEIA 688 Query: 164 RTECYLEGRV--PLQTLRAH--IDYGTAVAETAYGSCGIKVYVSL 204 TEC G+ P R ID+ + T YG G+KV++S Sbjct: 689 YTECGEYGKTSAPSSIYRREGVIDHASVHVSTRYGIYGVKVWISY 733 >gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus] Length = 286 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 66 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTVVVQTRFGFPEG 125 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ QL + RRA ++ M GA G +V+ SG+L Sbjct: 126 SVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 185 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ ++ G V + + D G GIKV + L Sbjct: 186 RG-QRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQGVLGIKVKLMLP 234 >gi|133907905|gb|ABO42412.1| ribosomal protein S3 [Petalostigma pubescens] Length = 481 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 322 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 381 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDACRVMKKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 441 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 481 >gi|328541176|gb|AEB21812.1| ribosomal protein S3 [Arachniopsis major] Length = 375 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNG+E+++TEC G L IDY YG G+ Sbjct: 311 RIKKCPYVKGIRIGCSGRLNGSEIAKTECRKCGETSLHVFSDQIDYAKTXXXXPYGILGV 370 Query: 199 KVYVS 203 K++VS Sbjct: 371 KLWVS 375 >gi|302748846|gb|ADL63903.1| ribosomal protein S3 [Goniolimon tataricum] Length = 467 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 5/163 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ ++++ + G+ + LI+ II+ R +++K+R LSN TN+ Sbjct: 306 KVMKWIEKFIDLGGI-RELIKGIEMMIEIILKKKRIPYRYNSYLNEVKKMRSLLSNRTNT 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V+ M+ G +G+++ Sbjct: 365 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSQIVKYIPLGMKKGVEGIRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGRL GAE++RTEC G+ IDY +A T YG Sbjct: 425 SGRLQGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGIL 467 >gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G + + + K +I+ + + ++G+ I ++ +K N Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPNG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|130076570|gb|ABO31943.1| ribosomal protein S3 [Haloragis erecta] Length = 468 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ Q ++ FR + V+ M+ G +G+++ Sbjct: 366 NTLIESVKIASVYQSASLIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 SGRL GAE++RTEC G+ P IDY A T YG Sbjct: 426 SGRLKGAEIARTECGKYGKTPRNVFNQKIDYAPAEVSTRYGI 467 >gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966] gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966] Length = 264 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+ L G + L+ H II+ + ++G KG + ++ ++ Sbjct: 24 EFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGRRLRELTTLVRQRFRFPEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V ++A +S+ +L + RRA ++ M GA G +V+ SG++ Sbjct: 84 SLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLRYVMESGAKGCEVVISGKV 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GA +++ + +G + Q + +D G G+KV + Sbjct: 144 RGA-RAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGLKVKIMHG 192 >gi|288191263|gb|ADC43984.1| ribosomal protein S3 [Rourea minor] Length = 269 Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 107 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 165 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 166 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 225 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGR GAE++RTEC G+ IDY A T YG G Sbjct: 226 SGRSEGAEIARTECGKYGKTSRNLFNQKIDYAPAEVSTRYGISG 269 >gi|288191247|gb|ADC43976.1| ribosomal protein S3 [Poliothyrsis sinensis] Length = 490 Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 6/138 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + + G +++K+R LSN TN+ + ++ +A+LIAQ I+ Q Sbjct: 353 IEIILRKRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIESIKIQSVYQSASLIAQDISFQ 412 Query: 124 LE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L +R FR + V+ M +G+++ SGRL GAE++RTEC G+ Sbjct: 413 LRNKRRSFRSIFSKIVKDLSFLMNKWVEGIRICCSGRLKGAEIARTECGKYGKTSCNVFN 472 Query: 180 AHIDYGTAVAETAYGSCG 197 +DY A T YG G Sbjct: 473 QKMDYAPAEVSTRYGISG 490 >gi|302749111|gb|ADL64035.1| ribosomal protein S3 [Viburnum sp. Qiu 95083] Length = 468 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 306 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYFNEVKKMRSLLSNRTNT 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 365 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGR GAE++RTEC G+ IDY A T YG G Sbjct: 425 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 468 >gi|133907797|gb|ABO42358.1| ribosomal protein S3 [Bergia pedicellaris] Length = 466 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 307 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYRYNSYLNEMKKMRSLLSNRTKT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL +++ FR + V+ M+ G +G+++ Sbjct: 366 NTLIKSIKIQSVYQSASLIAQDISFQLRKKKRSFRSIFNKIVRDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 426 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466 >gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3 in Mus musculus [Schistosoma japonicum] Length = 226 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|302748806|gb|ADL63883.1| ribosomal protein S3 [Hypericum sp. Qiu 95082] Length = 439 Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ L G+ ++ I+ II+ + +I+K+R LSN TN+ Sbjct: 277 KVMELIEKLLDLGGIGEL-IKGIEMMIEIILRNRIIAYRYNSYLNEIKKMRSLLSNRTNT 335 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++R FR + V+ M+ G +G+++ Sbjct: 336 NTLIESVKIQSVYQSASPIAQDISFQLRKKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 395 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 SGR GA+++RTEC G+ IDY A T YG G Sbjct: 396 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISG 439 >gi|133907791|gb|ABO42355.1| ribosomal protein S3 [Austrobuxus megacarpus] Length = 479 Score = 88.5 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDIPLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|302748879|gb|ADL63919.1| ribosomal protein S3 [Mirabilis jalapa] Length = 466 Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+ Sbjct: 305 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKILYGYNSYLNEVKKMRSLLSNRTNT 363 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++ Sbjct: 364 NTLIESVKIQSVYQSASPIAQDISFQPKNKRRSFRSIFSQIVKNIPLVMKKGVEGIRICC 423 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGRL GAE++RTEC G+ L IDY +A T YG Sbjct: 424 SGRLAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIL 466 >gi|302748515|gb|ADL63738.1| ribosomal protein S3 [Acorus gramineus] Length = 137 Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ K+R LSN T ++ + ++ +A+L+AQ I+ +L R + VQ Sbjct: 15 NEVNKMRSFLSNRTKTKTFIESVKIQSIYQSASLLAQEISLKLRRETKLXTIFAQIVQDI 74 Query: 142 MRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 G +G+++ SGRL G E+SRTEC G + IDY +A E YG G+KV Sbjct: 75 PYRWGVEGIRICCSGRLGGVEMSRTECGKYGITKCHVFKHQIDYASADIELPYGILGVKV 134 Query: 201 YVS 203 ++S Sbjct: 135 WIS 137 >gi|302748921|gb|ADL63940.1| ribosomal protein S3 [Opilia amentacea] Length = 468 Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + G+ G +++K+R LSN T Sbjct: 309 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 365 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 366 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 425 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 426 CCSGRLKGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYG 468 >gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus] gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus] Length = 165 Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 6/159 (3%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108 + + + T II+ + R ++G+KG I ++ + + L +V Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ + Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKF 119 Query: 169 LEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++G + ++D T G GIKV + L Sbjct: 120 VDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 158 >gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus] Length = 189 Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 6/164 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 G + +++ +++G + + ++D G GIK Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 185 >gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo] gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis] Length = 223 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+K I ++ + Sbjct: 25 EFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEKARRIRELTSLIQKRFGFSPD 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+L Sbjct: 85 TVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESGAKGCEVIVSGKL 144 Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G Q + + T + G GIKV + Sbjct: 145 R-AQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVLGIKVKIMHP 193 >gi|133907861|gb|ABO42390.1| ribosomal protein S3 [Homalanthus populneus] Length = 480 Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|288191243|gb|ADC43974.1| ribosomal protein S3 [Flacourtia jangomas] Length = 486 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L+ G LI+ II+ + R +++K+R LSN T + + Sbjct: 331 LRDKFINLGGIGELIKGIEMMIEIILRNRRIPYRYNSYLNEMKKMRSLLSNRTKTNTLIE 390 Query: 103 VNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ QL +R FR + V+ M +G+++ SGRL Sbjct: 391 SVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDISLLMNKWVEGIRICCSGRLK 450 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GAE++RTEC G+ IDY A T YG Sbjct: 451 GAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYG 486 >gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum] gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|302748513|gb|ADL63737.1| ribosomal protein S3 [Acanthus mollis] Length = 471 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++ Sbjct: 369 NTNIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKGVTGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGR GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIL 471 >gi|302748627|gb|ADL63794.1| ribosomal protein S3 [Catalpa fargesii] Length = 473 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 312 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++ Sbjct: 371 NTLIQSVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKRGVTGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGR GAE++RTEC G+ IDY A T YG Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIL 473 >gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|166895622|ref|YP_001661416.1| ribosomal protein S3 [Cycas taitungensis] gi|166706954|dbj|BAF98418.1| ribosomal protein S3 [Cycas taitungensis] Length = 579 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 6/175 (3%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIH 100 L L G LI+ II+ + + G +++K+R LS+ TN+ Sbjct: 396 LMEKLIDLGGIGELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMRSLLSDGTNTNTS 455 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGR 156 + ++ +A+ IAQ I+ Q FR + V+ M G+++ SGR Sbjct: 456 IGSVKIESVYQSASPIAQDISFQPRNGTGSFRSIFGQIVRDITFVMPKRVKGIRICRSGR 515 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211 GAE++RTEC G+ ID+ +A T YG G+KV++S +E Sbjct: 516 SKGAEIARTECREYGKTSCNVSHHKIDHASAKVSTRYGISGVKVWISYSNERKGR 570 >gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum] Length = 230 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|288191168|gb|ADC43937.1| ribosomal protein S3 [Trigonostemon verrucosus] Length = 421 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 4/138 (2%) Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 II+ + R +++K+R LSN TN+ ++ +A+ IAQ I+ Q Sbjct: 284 REIILRNRRIPYGYNSYFREMKKMRSLLSNRTNTNTKFESVKIKSVYQSASPIAQDISFQ 343 Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 L + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ Sbjct: 344 LRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFN 403 Query: 180 AHIDYGTAVAETAYGSCG 197 IDY A T YG G Sbjct: 404 QKIDYAPAEVSTRYGILG 421 >gi|150193|gb|AAA25438.1| S3 ribosomal protein [Mycoplasma capricolum] Length = 90 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 45/68 (66%) Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 A++ GA G+K SGRL G E++RTE YLEG VPL TLR +IDY A T YG G+KV Sbjct: 1 ALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLSTLRNNIDYALYEAPTTYGQIGVKV 60 Query: 201 YVSLRDEV 208 +++ + Sbjct: 61 WINHGEVF 68 >gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus] Length = 220 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K N+ Sbjct: 24 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G + + SG+L Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEAVVSGKL 143 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV + + D Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKV-----EIMLPWDXQ 196 Query: 215 IPAAEHRVVE 224 R Sbjct: 197 GKNGPKRPQP 206 >gi|133907865|gb|ABO42392.1| ribosomal protein S3 [Humiria balsamifera] Length = 469 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|133907907|gb|ABO42413.1| ribosomal protein S3 [Phyllanthus calycinus] Length = 463 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 304 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 362 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 ++ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 363 NTNIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSQIVKDIPLVMKKGVEGIRICC 422 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 423 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 463 >gi|133907849|gb|ABO42384.1| ribosomal protein S3 [Euphorbia abyssinica] Length = 484 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGEIGEL-IKGIEMMIEIILRNRTISYGYNSYLNEMKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAFAEVSTRYG 484 >gi|312232671|gb|ADQ53664.1| ribosomal protein S3 [Croton catamarcensis] Length = 426 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 267 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 325 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 326 NTLIFSVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 385 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 386 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426 >gi|312232797|gb|ADQ53727.1| ribosomal protein S3 [Croton poecilanthus] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907811|gb|ABO42365.1| ribosomal protein S3 [Caryocar glabrum] Length = 480 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNA 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC + IDY A T YG Sbjct: 440 SGRSKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|312232823|gb|ADQ53740.1| ribosomal protein S3 [Croton setiger] Length = 474 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 315 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 434 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 474 >gi|312232813|gb|ADQ53735.1| ribosomal protein S3 [Croton sampatik] Length = 474 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 315 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 434 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 474 >gi|133907919|gb|ABO42419.1| ribosomal protein S3 [Reinwardtia indica] Length = 480 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ G+ ++ + I + + G +I+K+R LSN T Sbjct: 321 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYSSYLNEIKKMRSLLSNRT 377 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 ++ ++ ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 378 HTNTLINSVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFTKIVKDIPLVMKKGVEGIRI 437 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|302748517|gb|ADL63739.1| ribosomal protein S3 [Actinidia arguta] Length = 474 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 6/173 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E + ++ G+ ++ I+ II+ R +++K+R Sbjct: 304 NLLGKD-KVMELIDKFIELGGIGEL-IKGIEILIEIILRKRRIPYGYNYYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN T + + ++ +A+ IAQ I+ Q ++ FR + V+ M+ G Sbjct: 362 LSNRTKTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 +G+++ SGR GAE++RTEC G+ IDY A T YG G+K Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 474 >gi|133907843|gb|ABO42381.1| ribosomal protein S3 [Erythrospermum phytolaccoides] Length = 449 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ R +++K+R LSN TN+ Sbjct: 290 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKRRIPYEYNSYLNEMKKMRSLLSNRTNT 348 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL+ + FR + ++ M+ G +G+++ Sbjct: 349 NTLIESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 408 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 409 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 449 >gi|302748798|gb|ADL63879.1| ribosomal protein S3 [Hydrastis canadensis] Length = 469 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E+++ + G+ + I + + + G +++K+R LSN T Sbjct: 310 KVMEFIEKFIDLGGIGE---WIKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V++ M G +G+++ Sbjct: 367 NTNTLIESVKIQSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNIKLVMPKGVEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|133907833|gb|ABO42376.1| ribosomal protein S3 [Dissiliaria muelleri] Length = 479 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|312232637|gb|ADQ53647.1| ribosomal protein S3 [Acidocroton trichophyllus] Length = 471 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 4/161 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + G LI+ II+ + R +++K+ LSN TN+ Sbjct: 311 KVMELIIEKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMLSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 431 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 471 >gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|254720838|ref|ZP_05182630.1| 30S ribosomal protein S3 [Bacillus anthracis str. A1055] Length = 43 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 1/44 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ 44 MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYIN 43 >gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni] gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFADG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + +ID + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKVKIM-----LDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|312232815|gb|ADQ53736.1| ribosomal protein S3 [Croton sapiifolius] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232809|gb|ADQ53733.1| ribosomal protein S3 [Croton roraimensis] Length = 469 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|133907783|gb|ABO42351.1| ribosomal protein S3 [Acalypha californica] Length = 474 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 317 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA---VQSAMRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL R FR + + M+ G +G+++ S Sbjct: 376 NTLIESIKMKSVYQSASLIAQDISFQLRSRS-FRSIFSKIEKDLPLVMKKGVEGIRICCS 434 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE++RTEC G+ L IDY A T YG Sbjct: 435 GRLEGAEIARTECGKYGKTSRNVLNQKIDYAPAEVSTRYG 474 >gi|133907895|gb|ABO42407.1| ribosomal protein S3 [Ostodes paniculata] Length = 480 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|1685377|gb|AAB36828.1| ribosomal protein S3 [Borrelia burgdorferi] Length = 93 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59 MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSRILHEDFLIRREIMKFLKGIKFDISDIEII 60 Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRK 89 + +++ + RPG +IG KG+++EKI + Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQ 92 >gi|312232761|gb|ADQ53709.1| ribosomal protein S3 [Croton miarensis] gi|312232783|gb|ADQ53720.1| ribosomal protein S3 [Croton nobilis] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232755|gb|ADQ53706.1| ribosomal protein S3 [Croton maestrensis] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907885|gb|ABO42402.1| ribosomal protein S3 [Micrantheum hexandrum] Length = 479 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 320 KVMELIEKFINPGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEMKKMRSLLSNRT 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 377 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKGVEGIRI 436 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 437 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|312232837|gb|ADQ53747.1| ribosomal protein S3 [Croton thomasii] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232779|gb|ADQ53718.1| ribosomal protein S3 [Croton nitens] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232775|gb|ADQ53716.1| ribosomal protein S3 [Croton morifolius] gi|312232803|gb|ADQ53730.1| ribosomal protein S3 [Croton pulcher] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232749|gb|ADQ53703.1| ribosomal protein S3 [Croton louvelii] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|312232781|gb|ADQ53719.1| ribosomal protein S3 [Croton niveus] gi|312232817|gb|ADQ53737.1| ribosomal protein S3 [Croton schiedeanus] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907909|gb|ABO42414.1| ribosomal protein S3 [Phyllanthus epiphyllanthus] Length = 478 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 319 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLSNRTNT 377 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 378 NTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 437 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 438 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478 >gi|312232777|gb|ADQ53717.1| ribosomal protein S3 [Croton myricifolius] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232785|gb|ADQ53721.1| ribosomal protein S3 [Croton noronhae] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar] Length = 244 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211 G + +++ ++ G + + ++D G GIKV + L ++ Sbjct: 143 RG-QRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQGVLGIKVKIMLPWDPSGKIGPK 200 Query: 212 DST 214 Sbjct: 201 KPL 203 >gi|312232743|gb|ADQ53700.1| ribosomal protein S3 [Croton lepidotus] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232735|gb|ADQ53696.1| ribosomal protein S3 [Croton lanatus var. tatacuensis] Length = 472 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans] Length = 225 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 20 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFADG 79 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++ Sbjct: 80 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 139 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + +ID + G GIKV + D DS+ Sbjct: 140 KG-QRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKVKIM-----LDHDSSG 193 Query: 216 PAAEHRVVE 224 + + Sbjct: 194 KKGPRKPLP 202 >gi|272716700|gb|ACZ95652.1| ribosomal protein S3 [Pseudotsuga sinensis var. gaussenii] Length = 569 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I Sbjct: 422 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 480 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + Q R FR + + V+ M G G+++ GR GAE++RTEC G+ Sbjct: 481 SFQPRDRTRSFRSILSKIVRDIPLVMPKGVRGIRICRPGRSKGAEIARTECREYGKTSCN 540 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R ID+ +A T YG G+KV +S Sbjct: 541 ASRHKIDHASAKVSTRYGILGVKVRISF 568 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + + WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDPSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVY 69 +I + K I ++ Sbjct: 60 CIIHHSPKRTFIHLF 74 >gi|328541180|gb|AEB21814.1| ribosomal protein S3 [Telaranea plumulosa] Length = 375 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198 + G+++ SGRLNGAE+++TE G IDY YG G+ Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSXXXFSDQIDYAKXXXXXPYGILGV 369 Query: 199 KVYVSL 204 KV+VS Sbjct: 370 KVWVSY 375 >gi|312232787|gb|ADQ53722.1| ribosomal protein S3 [Croton nubigenus] Length = 469 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|133907877|gb|ABO42398.1| ribosomal protein S3 [Linum arboreum] Length = 480 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ G+ ++ + I + + G +++K+R LSN T Sbjct: 321 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYSSYLNEMKKMRSLLSNRT 377 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 378 NXNXLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 437 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++ TEC G+ IDY A T YG Sbjct: 438 CCSGRSKGAEIASTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster] Length = 246 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 13/190 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++ +KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214 G + +++ +++G + + + DY T G GIKV V D Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197 Query: 215 IPAAEHRVVE 224 + + Sbjct: 198 NKIGPKKPLP 207 >gi|312232679|gb|ADQ53668.1| ribosomal protein S3 [Croton corinthius] Length = 472 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTLSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232687|gb|ADQ53672.1| ribosomal protein S3 [Croton cupreatus] Length = 472 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|114590683|ref|XP_001140763.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 7 [Pan troglodytes] gi|114590685|ref|XP_001140990.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 10 [Pan troglodytes] gi|114590687|ref|XP_001141075.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 11 [Pan troglodytes] gi|114590689|ref|XP_001140834.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 8 [Pan troglodytes] gi|114590691|ref|XP_001140906.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 9 [Pan troglodytes] Length = 243 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + ++ T II+ + R I G+KG I ++ + Sbjct: 23 EFLTQELAEDGYSGVEVQVTPTRTEIIILATRTQNIPGEKGRRIRELTAIVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G KV+ASG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVASGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ +++G + + ++ G GIKV D T Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIKVKFM-----LPWDPTG 196 Query: 216 PAAEHRVVE 224 + + Sbjct: 197 KTGPKKPLP 205 >gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624] gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624] Length = 263 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 8/160 (5%) Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128 ++ G++ ++ + +K + + L +V ++A +S+ +L + Sbjct: 54 HTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGL 113 Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGT 186 RRA ++ M GA G +V+ SG+L A +++ + +G + Q + ID T Sbjct: 114 AVRRACYGVLRFIMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSAT 172 Query: 187 AVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226 G GIKV + SD A + + Sbjct: 173 RHVLLRQGVLGIKVKIMRG-----SDPEGKAGPQKTLPDS 207 >gi|312232685|gb|ADQ53671.1| ribosomal protein S3 [Croton cuneatus] Length = 429 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 270 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 328 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 329 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429 >gi|312232661|gb|ADQ53659.1| ribosomal protein S3 [Croton argyratus] Length = 435 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 276 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 334 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 335 NTLIKSVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 394 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 395 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 435 >gi|133907839|gb|ABO42379.1| ribosomal protein S3 [Endospermum moluccanum] Length = 469 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|312232699|gb|ADQ53678.1| ribosomal protein S3 [Croton eichleri] Length = 472 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 472 >gi|312232645|gb|ADQ53651.1| ribosomal protein S3 [Croton adenophyllus] gi|312232729|gb|ADQ53693.1| ribosomal protein S3 [Croton humilis] Length = 472 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|288191291|gb|ADC43998.1| ribosomal protein S3 [Hua gabonii] Length = 479 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 320 KVMELIEQLINLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + VQ M+ G +G+++ Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVQDIPLVMKKGVEGIRI 436 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 437 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|133907871|gb|ABO42395.1| ribosomal protein S3 [Klainedoxa gabonensis] Length = 469 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + G+ G +I+K+R LSN T Sbjct: 310 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEIKKMRSLLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ +L + FR + V+ M+ G +G+++ Sbjct: 367 NTNTLIESVKIQSVYQSASLIAQDISLKLRNKTRSFRSIFSKIVKDIPLVMKKGMEGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY +A T YG Sbjct: 427 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYG 469 >gi|133907835|gb|ABO42377.1| ribosomal protein S3 [Elaeodendron orientale] Length = 480 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 321 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 377 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 378 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 437 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|312232719|gb|ADQ53688.1| ribosomal protein S3 [Croton goudotii] Length = 472 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232707|gb|ADQ53682.1| ribosomal protein S3 [Croton fruticulosus] Length = 472 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232657|gb|ADQ53657.1| ribosomal protein S3 [Croton argentinus] gi|312232717|gb|ADQ53687.1| ribosomal protein S3 [Croton gnaphalii] gi|312232737|gb|ADQ53697.1| ribosomal protein S3 [Croton laureltyanus] Length = 426 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 267 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 325 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 326 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 385 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 386 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426 >gi|223927971|gb|ACN23633.1| ribosomal protein S3 [Halimeda discoidea] Length = 135 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK++P+ F LG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVHPLGFXLGITQPHLSQWYAXKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHIXRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I+++ +P ++I KK + +K++ + + + + +I+ Sbjct: 61 IEDHLEIVIHXQKPDILIXKKSETXKSFQKQIKKYIFQYRQIEWNSKLKVXVYIFRCKIH 120 Query: 113 ATLIAQSIAQQLERR 127 A+ I + LE+R Sbjct: 121 ASXXXDFIVEHLEKR 135 >gi|312232677|gb|ADQ53667.1| ribosomal protein S3 [Croton coriaceus] Length = 472 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907801|gb|ABO42360.1| ribosomal protein S3 [Brexia madagascariensis] Length = 470 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 311 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 367 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++ Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 427 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 428 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470 >gi|312232771|gb|ADQ53714.1| ribosomal protein S3 [Croton minimus] Length = 436 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 10/167 (5%) Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKL 91 ED K+ E ++ + G+ ++ I + + + G +++K+R L Sbjct: 274 KED-KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLL 329 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147 SN TN+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G + Sbjct: 330 SNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVE 389 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 390 GIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 436 >gi|133907799|gb|ABO42359.1| ribosomal protein S3 [Bischofia javanica] Length = 480 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|133907807|gb|ABO42363.1| ribosomal protein S3 [Carallia brachiata] Length = 480 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 380 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRAFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ L IDY A T YG Sbjct: 440 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYG 480 >gi|312232695|gb|ADQ53676.1| ribosomal protein S3 [Croton draco] gi|312232829|gb|ADQ53743.1| ribosomal protein S3 [Croton speciosus] Length = 472 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSQIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232807|gb|ADQ53732.1| ribosomal protein S3 [Croton piptocalyx] Length = 268 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 109 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 167 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 168 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 227 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 228 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 268 >gi|133907827|gb|ABO42373.1| ribosomal protein S3 [Croton alabamensis var. alabamensis] Length = 480 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 480 >gi|312232739|gb|ADQ53698.1| ribosomal protein S3 [Croton lechleri] Length = 280 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 121 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 179 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 180 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 239 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 240 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 280 >gi|312232733|gb|ADQ53695.1| ribosomal protein S3 [Croton jimenezii] Length = 472 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232725|gb|ADQ53691.1| ribosomal protein S3 [Croton hircinus] Length = 429 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R ++ K+R LSN TN+ Sbjct: 270 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNT 328 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 +L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 329 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429 >gi|312232845|gb|ADQ53751.1| ribosomal protein S3 [Croton yavitensis] Length = 472 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232643|gb|ADQ53650.1| ribosomal protein S3 [Brasiliocroton mamoninha] Length = 469 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469 >gi|302748941|gb|ADL63950.1| ribosomal protein S3 [Peperomia obtusifolia] Length = 486 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ + L I+ + +++K+R L N TN+ Sbjct: 313 KVMEWIEKFIDLGGIGEFLKGIELIIEI-ILKNRSIPYRYNSYLNEVQKMRSLLYNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER------RVVFRRA---MKRAVQSAMRFGADG 148 + ++ +A+ IAQ I+ Q +FR + + + M G +G Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNLYNIISGRLFRSILSPIWKEIPLVMEKGVEG 431 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +++ SGRL G E++RT C G+ IDY A T YG G+KV +S Sbjct: 432 IRICCSGRLKGGEIARTACGKYGKTSRNVFNKKIDYAPAEVSTRYGISGVKVRIS 486 >gi|312232647|gb|ADQ53652.1| ribosomal protein S3 [Croton alabamensis] Length = 472 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 472 >gi|133907929|gb|ABO42424.1| ribosomal protein S3 [Stachystemon axillaris] Length = 479 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN Sbjct: 320 KVMELIEKFINPGGIGEL-IKGIEMMIEIILRNRRIPXGYNSYLNEMKKMRSLLSNRTNX 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSXLTKIVKDIPLVMKKGVEGIRICC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|133907935|gb|ABO42427.1| ribosomal protein S3 [Thryallis longifolia] Length = 466 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +I+K+R LSN T + Sbjct: 307 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTKT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR +++ M+ G +G+++ Sbjct: 366 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKSIPLVMKKGVEGIRISC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466 >gi|224065262|ref|XP_002301744.1| predicted protein [Populus trichocarpa] gi|222843470|gb|EEE81017.1| predicted protein [Populus trichocarpa] Length = 74 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 47/74 (63%) Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 MK+A++ + + G++V + L+G +++R E EGRVPLQTLRA I+Y + T Y Sbjct: 1 MKKAIELTEQSNSKGIQVQIAKHLDGKKIARAEWVREGRVPLQTLRAKINYCSYTVRTIY 60 Query: 194 GSCGIKVYVSLRDE 207 GIK+++ + +E Sbjct: 61 RVLGIKIWIFIDEE 74 >gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum] Length = 230 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 11/189 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++ ++A A+ + +L + R+A ++ M GA G +VI SG++ Sbjct: 85 TLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + ++D + G GIKV + D DS+ Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198 Query: 216 PAAEHRVVE 224 + + Sbjct: 199 KKGPRKPLP 207 >gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 242 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 16/211 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ L + G A + + +T+ +IV ++ ++G++G Sbjct: 17 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGRR 69 Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ K + I + V + ++A + A+++ +L + RRA ++ Sbjct: 70 IHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLRF 129 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 M GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI Sbjct: 130 TMAAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQGVLGI 188 Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226 +V + +++ E+D Sbjct: 189 RVKIMRDPAKNKFGPKALPDAVMIAEYKEED 219 >gi|133907803|gb|ABO42361.1| ribosomal protein S3 [Bruguiera gymnorhiza] Length = 480 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMQKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 380 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFTKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ L IDY A T YG Sbjct: 440 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYG 480 >gi|130076566|gb|ABO31941.1| ribosomal protein S3 [Daphniphyllum sp. Qiu 94162] Length = 471 Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVIELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 SGR GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI 470 >gi|322502154|emb|CBZ37237.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 342 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 13/197 (6%) Query: 29 YGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88 Y L E+L+ L + G + + T I++ + + ++G G I ++ Sbjct: 140 YAELF-------EFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGRRIRELT 192 Query: 89 ---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 ++ N ++ L V V ++A +S+ +L + RRA ++ M G Sbjct: 193 ACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESG 252 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 A G +V G++ G + +++ + +G + ++ +D G G+KV + Sbjct: 253 AKGCEVTVGGKIKG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIM 311 Query: 204 LRDEVSDSDSTIPAAEH 220 L + + + Sbjct: 312 LPGDSTGRNGPSEPLPD 328 >gi|133907869|gb|ABO42394.1| ribosomal protein S3 [Kiggelaria africana] Length = 478 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 319 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 377 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152 + ++ +A+ IAQ I+ QL R +F + MK + M+ G +G+++ Sbjct: 378 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIMKD-IPLVMKKGVEGIRIC 436 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 437 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478 >gi|133907863|gb|ABO42391.1| ribosomal protein S3 [Hugonia platysepala] Length = 480 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + ++ + I + + G +++K+R LSN T Sbjct: 321 KVMELIEKFRNLGRIGEL---KKGIEMMIEIILRNXRIPXGXNSYLXEMKKMRSLLSNRT 377 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 378 NTNTLIESVKIRSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 437 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|133907921|gb|ABO42420.1| ribosomal protein S3 [Ricinus communis] Length = 480 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|312232669|gb|ADQ53663.1| ribosomal protein S3 [Croton caracasanus] Length = 472 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907887|gb|ABO42403.1| ribosomal protein S3 [Microdesmis puberula] Length = 467 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 5/159 (3%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 368 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG Sbjct: 369 LIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 428 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 RL GAE++RTEC G+ IDY A T YG Sbjct: 429 RLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467 >gi|302749089|gb|ADL64024.1| ribosomal protein S3 [Thymelaea hirsuta] Length = 475 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ ++ + I + + G +++K++ LSN T Sbjct: 317 KVMELIDKFINLGGIEEL---KKGIEVVIEIILRNRRIPYGYNSYLNEVKKMKSLLSNRT 373 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V++ M+ G +G+++ Sbjct: 374 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKNIPLVMKKGVEGLRI 433 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 SGRL GAE++RTEC G+ IDY +A T Y Sbjct: 434 CCSGRLKGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRY 475 >gi|11497487|ref|NP_042277.1| ribosomal protein S3 [Prototheca wickerhamii] gi|1173303|sp|P46740|RT03_PROWI RecName: Full=Ribosomal protein S3, mitochondrial gi|467878|gb|AAD12665.1| ribosomal protein S3 [Prototheca wickerhamii] Length = 500 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 5/144 (3%) Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126 + L+ + I LS+ N + L + +A IA I +ER Sbjct: 357 NILGNSKSLVSRNQFKYKNYIENFLSSQYNIDSQLFPFISKQNWQSAGFIADEIVYFIER 416 Query: 127 RVVFRRAMKRAVQSA-MRFGADGVKVIASGRLNG----AELSRTECYLEGRVPLQTLRAH 181 RV F R R ++ A M+ G+++ SGR+ G A+ + EC G L Sbjct: 417 RVSFSRIKNRILRQASMQSYVRGIRITCSGRVGGKSKKAQRATQECVKYGETSLHVFECK 476 Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 ID+ + +A T++G GIKV++ + Sbjct: 477 IDFASRIANTSFGLVGIKVWICFK 500 Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 1 MGQKINPILFRL-GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK NPI RL VN ++S W++ Y DL + Y+ K + + + Sbjct: 1 MGQKTNPISLRLQNVNRNFDSCWYSD-YFYAKCFSRDLYLNNYINTFFKLYRLPQARVCV 59 Query: 60 THKNCRIIVY 69 I VY Sbjct: 60 NFGIQNIKVY 69 >gi|312232819|gb|ADQ53738.1| ribosomal protein S3 [Croton sellowii] Length = 429 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R ++ K+R LSN TN+ Sbjct: 270 KVMELIEKFINLGRIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNT 328 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 +L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 329 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429 >gi|133907883|gb|ABO42401.1| ribosomal protein S3 [Malpighia stevensii] Length = 467 Score = 85.8 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+ Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++ Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T +G Sbjct: 427 SGRSRGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFG 467 >gi|312232639|gb|ADQ53648.1| ribosomal protein S3 [Astraea klotzschii] Length = 470 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + G LI+ II+ + R +++K+R LSN TN+ Sbjct: 310 KLMELIIEKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRISC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 470 >gi|302748757|gb|ADL63859.1| ribosomal protein S3 [Gentiana macrophylla] Length = 484 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 324 KVMEFIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYAYNSYLNEVKKMRSLLSNRTNT 382 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +GV++ Sbjct: 383 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVREIPLVMKKGVEGVRICC 442 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 SGRL GAE++RTEC G+ + IDY A T YG Sbjct: 443 SGRLEGAEIARTECGKYGKTSRNVVNQKIDYAPAEVSTRYGI 484 >gi|133907823|gb|ABO42371.1| ribosomal protein S3 [Clutia myricoides] Length = 482 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 382 NTLIESVKIQSVYQSASTIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNFFNQKIDYAPAEVSTRYG 482 >gi|133907937|gb|ABO42428.1| ribosomal protein S3 [Trichadenia zeylanica] Length = 465 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN Sbjct: 306 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNX 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++ Sbjct: 365 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSQIIKDIPLVMKKGVEGIRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 425 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 465 >gi|302748959|gb|ADL63959.1| ribosomal protein S3 [Pinus sp. Qiu 94013] Length = 365 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%) Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124 II+ + R ++ K+R LSN TN+ + ++ +A+ IAQ I+ QL Sbjct: 224 EIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASPIAQDISFQL 282 Query: 125 ERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180 R FR + + V+ M G G+++ GRL GAE++RTEC G+ R Sbjct: 283 RDRTRSFRSILSQIVRDIPLVMPKGVRGIRICRPGRLKGAEIARTECREYGKTSCNASRH 342 Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203 ID+ +A T YG G+KV +S Sbjct: 343 KIDHASAKVSTRYGILGVKVRIS 365 >gi|133907809|gb|ABO42364.1| ribosomal protein S3 [Carpotroche longifolia] Length = 449 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + +++K+R LSN T Sbjct: 290 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRIIPYEYNSYLNEMKKMRSLLSNRT 346 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL+ + FR + ++ M+ G +G+++ Sbjct: 347 NTNTLIESVKIQSVYQSASPIAQDISFQLKNKTRSFRSIFSKIIKDIPLVMKKGVEGIRI 406 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 407 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 449 >gi|312232839|gb|ADQ53748.1| ribosomal protein S3 [Croton urucurana] Length = 472 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 372 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232697|gb|ADQ53677.1| ribosomal protein S3 [Croton ekmanii] Length = 472 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL G E++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A] gi|152060854|sp|A0RVX9|RS3_CENSY RecName: Full=30S ribosomal protein S3P gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A] Length = 261 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96 K+RE+L+ ++K +G + + +E+ + +I ++ RPG++IG+KG I ++ ++L + Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASG 155 + V E+ PE+ ++ +A +ER FRRA +Q M A GV++ SG Sbjct: 76 KSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITISG 135 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDY--GTAVAETAYGS 195 +L G + S E + G +P A + +T G Sbjct: 136 KLRG-DRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176 >gi|312232683|gb|ADQ53670.1| ribosomal protein S3 [Croton corylifolius] gi|312232753|gb|ADQ53705.1| ribosomal protein S3 [Croton lundellii] Length = 472 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232641|gb|ADQ53649.1| ribosomal protein S3 [Astraea lobata] Length = 470 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + G LI+ II+ + R +++K+R LSN TN+ Sbjct: 310 KLMELIIDKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 470 >gi|133907831|gb|ABO42375.1| ribosomal protein S3 [Dicella nucifera] Length = 468 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+ Sbjct: 309 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 367 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++ Sbjct: 368 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 427 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T +G Sbjct: 428 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFG 468 >gi|133907829|gb|ABO42374.1| ribosomal protein S3 [Ctenolophon englerianus] Length = 467 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++K+R LSN T Sbjct: 308 KVMELIEKFINLGRIGEL---IKGIEMMIEIILRNRRIPYGXNSYLNEMKKMRSLLSNRT 364 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 424 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467 >gi|312232649|gb|ADQ53653.1| ribosomal protein S3 [Croton alainii] Length = 472 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL G E++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|312232741|gb|ADQ53699.1| ribosomal protein S3 [Croton leonis] Length = 472 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 313 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 369 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 370 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 429 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL G E++RTEC G+ IDY A T YG Sbjct: 430 CCSGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei] gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei] Length = 255 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 31/216 (14%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----- 95 +L L + G + + + T +I+ + R ++G++G I+++ + Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFAFEEG 84 Query: 96 ------NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149 + L +V + A +S+ +L + RRA ++ M GA GV Sbjct: 85 SVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGV 144 Query: 150 KVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-- 205 +VI SG+L G + ++ +++G + + +I + G GIKV + L Sbjct: 145 EVIVSGKLRG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYD 203 Query: 206 ---------------DEVSDSDSTIPAAEHRVVEKD 226 V + IP H +++ Sbjct: 204 PRGQNGPRIALPDHVQIVEPQEEVIPKEPHSQHKEE 239 >gi|302748601|gb|ADL63781.1| ribosomal protein S3 [Byblis liniflora] Length = 471 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + + G +++K+R LSN T Sbjct: 310 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 366 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL +R FR + V++ M+ G G+++ Sbjct: 367 NTNTLMESVKIQSLYQSASPIAQDISFQLRTKRRSFRSIFSQIVKNIPSVMKRGVTGIRI 426 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGR GA+++RTEC G+ IDY A T +G Sbjct: 427 CCSGRSEGAKIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFGIL 471 >gi|133907893|gb|ABO42406.1| ribosomal protein S3 [Ochna multiflora] Length = 431 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ +K G+ ++ I + + + G +++K+R LSN T Sbjct: 272 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 328 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 329 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 388 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY TA T YG Sbjct: 389 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 431 >gi|133907815|gb|ABO42367.1| ribosomal protein S3 [Celastrus orbiculatus] Length = 464 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 305 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNSYLNEVKKMRSLLSNRT 361 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 362 KTNTLIESVKIKDVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVQGIRI 421 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 422 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 464 >gi|133907817|gb|ABO42368.1| ribosomal protein S3 [Cespedesia spathulata] Length = 426 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ +K G+ ++ I+ II+ R +I+K+R LSN TN+ Sbjct: 267 KVMELIEKFIKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEIKKMRSLLSNRTNT 325 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 326 TTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRISC 385 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY TA T YG Sbjct: 386 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 426 >gi|133907793|gb|ABO42356.1| ribosomal protein S3 [Balanops vieillardii] Length = 481 Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 322 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 380 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 441 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 481 >gi|312232693|gb|ADQ53675.1| ribosomal protein S3 [Croton discolor] gi|312232703|gb|ADQ53680.1| ribosomal protein S3 [Croton flavens] gi|312232731|gb|ADQ53694.1| ribosomal protein S3 [Croton impressus] Length = 472 Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RT+C G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907927|gb|ABO42423.1| ribosomal protein S3 [Sauvagesia erecta] Length = 431 Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ LK G+ ++ I+ II+ R +++K+R LSN TN+ Sbjct: 272 KVMELIEKFLKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEMKKMRSLLSNRTNT 330 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 331 TTLIESVKIQSVYQSASPLAQDISFQLRNKKKSFRSIFSKIVKDIPLVMKKGVEGIRISC 390 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY TA T YG Sbjct: 391 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 431 >gi|183013841|gb|ACC38439.1| ribosomal protein S3 [Phytophthora ramorum] Length = 260 Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 46/239 (19%) Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69 L WNS+W +EY LLH DL+I++Y + + K + I I +T KN + VY Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINIVKTSKNINVYVY 60 Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111 + +I+ K ++ ++ ++ Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120 Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147 N +I I Q LER+ ++ + + + ++ Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179 Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++V + Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWVFFK 238 >gi|312232795|gb|ADQ53726.1| ribosomal protein S3 [Croton peraeruginosus] Length = 472 Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RT C G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTACGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba] gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba] Length = 156 Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%) Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 II+ + R ++G+KG I ++ +K + + L +V + A A+S Sbjct: 2 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAES 61 Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQT 177 + +L + RRA ++ M GA G +VI SG+L A+ +++ + +G + Q Sbjct: 62 LRYKLLGGLAVRRACYGVLRFVMDSGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQP 120 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSL 204 + +ID G GIKV + L Sbjct: 121 VNEYIDSAVRHVLLRQGVLGIKVKIML 147 >gi|302748792|gb|ADL63876.1| ribosomal protein S3 [Humiria balsamifera] Length = 470 Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 312 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKRGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 SGR GAE++RTEC G+ IDY A T Y Sbjct: 431 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRY 470 >gi|226348816|gb|ACO50720.1| ribosomal protein S3 [Micromonas pusilla CCMP1545] Length = 310 Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 3/122 (2%) Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE--RRVVFRRAMKRAVQS-AM 142 + LS T +++ V ++ +A+ +A +A Q E R+ FR + V Sbjct: 187 HVEAILSKTTGTQVVWEVYKMKHVFSSASFVAHYMAIQFETQRKKPFRAIFEDVVSKCIK 246 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 GV+V+ +GR+ A + T+ G+ L IDY + A + G GIKV++ Sbjct: 247 HAHIVGVRVVIAGRIRNAAKASTQMAKYGQTSLHVFSHAIDYASTSAHSKNGLLGIKVWL 306 Query: 203 SL 204 S Sbjct: 307 SY 308 Score = 44.2 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 1/89 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M QKI P RL N + W Y LLH +I + + +Q G+ + Sbjct: 1 MAQKIGPASLRLWTNKEVHGLW-MGSVTYTELLHTGERIHTFCERLFRQLGLRGSMTHVQ 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK 89 N R+++ S P K + + Sbjct: 60 ASNHRLLIQSFVPKPSAMHKKFRHKGFHR 88 >gi|312232847|gb|ADQ53752.1| ribosomal protein S3 [Croton ynesae] Length = 471 Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 312 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 370 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 430 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RT C G+ IDY A T YG Sbjct: 431 SGRLEGAEIARTXCGKYGKTSRNVFNQKIDYAPAEVSTRYG 471 >gi|312232759|gb|ADQ53708.1| ribosomal protein S3 [Croton megistocarpus] Length = 472 Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVNNQKIDYAPAEVSTRYG 472 >gi|183013835|gb|ACC38435.1| ribosomal protein S3 [Phytophthora ramorum] Length = 260 Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 46/239 (19%) Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69 L WNS+W +EY LLH DL+I++Y Q + K + I I +T KN + VY Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFQNIFNYKNLKLIDINIIKTSKNINVYVY 60 Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111 + +I+ K ++ ++ ++ Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120 Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147 N +I I Q LER+ ++ + + + ++ Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179 Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++V + Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWVFFK 238 >gi|133907881|gb|ABO42400.1| ribosomal protein S3 [Malesherbia linearifolia] Length = 481 Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 4/156 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L + G I+ II+ + R +I K+R LSN TN+ + Sbjct: 326 LIDKFRNLGRIGEFIKGIEMMIEIILRNRRIPYGYNSYFNEITKMRSLLSNRTNTNTLIE 385 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ SGRL Sbjct: 386 SVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCSGRLE 445 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GAE++RTEC G+ L IDY A T YG Sbjct: 446 GAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 481 >gi|327195225|ref|YP_004339007.1| ribosomal protein S3 [Coccomyxa sp. C-169] gi|325070721|gb|ADY75449.1| ribosomal protein S3 [Coccomyxa sp. C-169] Length = 472 Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%) Query: 74 GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA 133 + + I + L + + + + E A +++ IA LERRV FRR Sbjct: 337 EIRKQGNHSSISTMEAVLGRGLGLSVAMYPYKSMEEEQTARFLSEEIAYYLERRVPFRRI 396 Query: 134 MKRAVQSAMRFGADGVKVIASGRLNG----AELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 + ++ + +GVKV SGR+ G A+ SR E + G+ + + + + A Sbjct: 397 KQALMRELQKRYIEGVKVSCSGRVGGRSKKAQRSREEGFQWGQTSSHVFSSKLGFASRSA 456 Query: 190 ETAYGSCGIKVYVSLR 205 T +G GIKV++ + Sbjct: 457 LTPFGKVGIKVWICYK 472 Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Query: 1 MGQKINPILFRLG-VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MGQK NPI RL N +++S W++ Y LL D+K R YL +Q K L+ Sbjct: 1 MGQKANPISLRLKTTNKSFDSCWYSYL-HYSTLLSLDIKARSYLDKIFEQIRYPKPLVAL 59 Query: 60 T--HKNCRIIVYSARPGLIIGKKGTDIE 85 T K ++++ P G++G + Sbjct: 60 TLMPKRGKVLMLYLNPERSRGERGERFQ 87 >gi|272716695|gb|ACZ95649.1| ribosomal protein S3 [Larix gmelinii var. principis-rupprechtii] Length = 564 Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 7/148 (4%) Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I + + G ++ K+R LSN TN+ + ++ +A+ IAQ I Sbjct: 417 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASPIAQDI 475 Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 + Q R FR + + V+ M G G+++ GR GAE++RTEC G+ Sbjct: 476 SFQPRDRTRSFRSILSQIVRDIPLVMPKGVRGIRICRPGRSKGAEIARTECREYGKTSCN 535 Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R ID+ +A T YG G+KV +S Sbjct: 536 ASRHKIDHASAKVSTRYGILGVKVRISF 563 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54 M +K+NPI RL +N + + WF+ YG L+++D+ +R+Y + + Sbjct: 1 MARKVNPISVRLNLNRSSDPSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 +I + K I ++ R + ++G Sbjct: 60 CIIHHSPKRTFIHLFLPRRPQRLKRRGRS 88 >gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila] gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210] gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila] Length = 243 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 6/180 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMT 95 + + L+ AG A I + RT I + + +P +IG KK ++ + +K + Sbjct: 24 LHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKHKELTQFLQKRFGYS 83 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + +I + + + A+ +++ +L + V R A ++S ++ GA G ++I SG Sbjct: 84 DDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISG 143 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L + ++T + +G + Q +ID G G+KV + L E + + Sbjct: 144 KLK-QQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKK 202 >gi|302748854|gb|ADL63907.1| ribosomal protein S3 [Lonicera sp. Qiu 05010] Length = 470 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 311 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470 >gi|302748963|gb|ADL63961.1| ribosomal protein S3 [Pittosporum tobira] Length = 473 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 372 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 432 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 473 >gi|133907911|gb|ABO42415.1| ribosomal protein S3 [Podocalyx loranthoides] Length = 467 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN Sbjct: 308 KVMELIEKFINLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEMKKMRSLLSNRTNQ 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIQSVYQSASLIAQDISFQLRNKTREFRSIFSKIVKDIPLVMKKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ I Y A T YG Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIYYAPAEVSTRYG 467 >gi|133907847|gb|ABO42383.1| ribosomal protein S3 [Euonymus alatus] Length = 466 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 307 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 363 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 364 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 423 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 424 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466 >gi|130076578|gb|ABO31947.1| ribosomal protein S3 [Kalanchoe pinnata] Length = 236 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 9/165 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 75 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNKRIPYGYNYYLNEVQKMRSLLSNRT 131 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 132 NTNTLIQSVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 191 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 SGR GAE++RTEC G+ IDY A T YG Sbjct: 192 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIF 236 >gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 261 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 24/212 (11%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ ++ + + + L V + A A+S+ +L + RRA ++ Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197 M GA GV+V SG+L A+ ++ + +G + L T +D + G G Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188 Query: 198 IKVYVSL---------RDEVSDSDSTIPAAEH 220 I+V + + D TI + Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 220 >gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] Length = 231 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L + G + + + +T II+ + R ++G+KG I ++ ++ M Sbjct: 24 EMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLGEKGRRIRELTTLVQRRFQMAEG 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V + A +S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 84 SVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRYIMEAGAKGAEVVVSGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 G + ++ + +G + +R +I T A G+ G++V + L Sbjct: 144 RG-QRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQGTIGMRVKIML 191 >gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 261 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 24/212 (11%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ ++ + + + L V + A A+S+ +L + RRA ++ Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197 M GA GV+V SG+L A+ ++ + +G + L T +D + G G Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188 Query: 198 IKVYVSL---------RDEVSDSDSTIPAAEH 220 I+V + + D TI + Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 220 >gi|288191120|gb|ADC43913.1| ribosomal protein S3 [Bhesa archboldiana] Length = 451 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 4/161 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + LI+ II+ ++R +++K+R LSN T + Sbjct: 291 KVMELIEKFINLGRGIGELIKGIEMMIEIILRNSRIPYGYNSYLNEMKKMRSLLSNRTKT 350 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++ Sbjct: 351 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVPGIRICC 410 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GA+++RTEC + IDY A T YG Sbjct: 411 SGRSKGAKIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYG 451 >gi|133907853|gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis] Length = 466 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 309 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 367 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155 + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG Sbjct: 368 LIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 427 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 R GAE++RTEC G+ IDY A T YG Sbjct: 428 RSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466 >gi|133907813|gb|ABO42366.1| ribosomal protein S3 [Casearia sylvestris] Length = 480 Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I II+ + R +++K+R LSN TN+ Sbjct: 321 KVMELIDKFINLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRLKGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 480 >gi|302748663|gb|ADL63812.1| ribosomal protein S3 [Connarus championii] Length = 469 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 311 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR ++ V+ M+ G G+++ Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFRKIVKGIPLVMKKGVSGIRICC 429 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 SGR GAE++RTEC G+ IDY A T Y Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNLFNQKIDYAPAEVSTRY 469 >gi|133907845|gb|ABO42382.1| ribosomal protein S3 [Erythroxylum coca] Length = 480 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ I++ + + +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMLIEILLRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ L IDY A T YG Sbjct: 440 SGRSEGAEIARTECGKYGKTSRNVLNQKIDYAPAEVSTRYG 480 >gi|312232851|gb|ADQ53754.1| ribosomal protein S3 [Croton zambesicus] Length = 472 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 313 KVMELIEKCINLGGIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 369 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 370 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 429 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 430 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472 >gi|133907925|gb|ABO42422.1| ribosomal protein S3 [Sapria himalayana] Length = 477 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 320 KVMKLIEKLINLGGIGEL-IKGIEMMIEIILRNIRIPYGYNSYLNEMQKMRSLLSNRTNT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVIAS 154 + ++ +A+ IAQ I+ QL ++ +F + +K + M+ G +G+++ S Sbjct: 379 NTLIESVKIQSVYQSASPIAQDISFQLRKKTSPYIFSQIVKD-IPLVMKKGVEGIRICCS 437 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE +RTEC G+ IDY A T YG Sbjct: 438 GRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 477 >gi|302748579|gb|ADL63770.1| ribosomal protein S3 [Berzelia lanuginosa] Length = 484 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 325 KVMELIEKFIDLGGIGELRRGI---EMMIEILLRKKRIPYGYNSYLNEVKKMRSLLSNRT 381 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 442 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484 >gi|133907891|gb|ABO42405.1| ribosomal protein S3 [Neoscortechinia kingii] Length = 479 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 379 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISC 438 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE+ RTEC G+ IDY A T YG Sbjct: 439 SGRLEGAEIVRTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|133907825|gb|ABO42372.1| ribosomal protein S3 [Codiaeum variegatum] Length = 448 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%) Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86 + LL +D K+ E ++ + G+ ++ E I++ R L +++K Sbjct: 279 RRFRNLLGKD-KVLELVEKLINLGGIGELGKEI-EMMIEIVLRYRRLRLPYNSYLNEMKK 336 Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMR-- 143 +R LSN TN+ I + ++ +A+ IAQ I+ +L + FR + V+ Sbjct: 337 MRSLLSNRTNTNILIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPNGM 396 Query: 144 -FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 397 KKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 448 >gi|312232675|gb|ADQ53666.1| ribosomal protein S3 [Croton cordiifolius] Length = 414 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + + ++IE +N RI++ + +++K+R Sbjct: 246 KVMELIEKFINLGRIGELIKGIEMMIEIILRNRRILIVKRNRRIPYRYNSYLYEMKKMRS 305 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G Sbjct: 306 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKG 365 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 366 VEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 414 >gi|133907899|gb|ABO42409.1| ribosomal protein S3 [Paropsia madagascariensis] Length = 464 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 6/160 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 + ++ K + +I I + + G ++ K+R LSN TN+ Sbjct: 305 KVIELIEKFRNLGRIGELIKGIEMMIEIILRNRIIPYGYNSYLNEMTKMRSLLSNRTNTN 364 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ + A+LIAQ I+ QL + FR + V+ M+ G G+++ S Sbjct: 365 TLIESVKIQSVYLCASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCS 424 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE++RTEC G+ IDY A T YG Sbjct: 425 GRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 464 >gi|312232757|gb|ADQ53707.1| ribosomal protein S3 [Croton matourensis] Length = 443 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R + K+R LSN TN+ Sbjct: 284 KVMELIDKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYSSYLNKMTKMRSLLSNRTNT 342 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 +L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 343 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 402 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 403 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 443 >gi|302748719|gb|ADL63840.1| ribosomal protein S3 [Ehretia anacua] Length = 470 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN T++ Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTST 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 SGR GAE++RTEC G+ IDY A T YG Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI 470 >gi|133907889|gb|ABO42404.1| ribosomal protein S3 [Monotaxis megacarpa] Length = 478 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 319 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 377 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKVIA 153 + + ++ +A+ IAQ I+ QL + FR + + V+ G+++ Sbjct: 378 KTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKRVEGIRICC 437 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 438 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478 >gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae] Length = 216 Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNS 97 E+ LK+ G + I+ +I + +P ++G K + I+ + + + +S Sbjct: 23 EFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKHLLMQRFPLLSS 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + ++V + + A I +L + FRRA+ A++S GA G +I SG+L Sbjct: 83 GVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGAQGCVIIISGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRA---HIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ Y +G + + T + + G GIKV + L Sbjct: 143 KG-QRAKSVKYQQGLM-IHTGNDRKLFVKEAISTVLLKQGVIGIKVKIMLP 191 >gi|183013838|gb|ACC38437.1| ribosomal protein S3 [Phytophthora ramorum] gi|183013844|gb|ACC38441.1| ribosomal protein S3 [Phytophthora ramorum] Length = 260 Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 46/239 (19%) Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69 L WNS+W +EY LLH DL+I++Y + + K + I I +T KN + VY Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINIIKTSKNINVYVY 60 Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111 + +I+ K ++ ++ ++ Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120 Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147 N +I I Q LER+ ++ + + + ++ Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179 Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++ + Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWFFFK 238 >gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica] Length = 165 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 8/160 (5%) Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108 + + T II+ + + ++G+KG I ++ + + I L +V Sbjct: 1 TPGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVAT 60 Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ + Sbjct: 61 RGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKF 119 Query: 169 LEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205 ++G + + + DY T G GIKV + L Sbjct: 120 VDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIMLP 158 >gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera] gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis] gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis] gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis] gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum] gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum] gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii] gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii] gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea] Length = 194 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 ++ + +K + + L +V ++A +S+ +L + RRA ++ M Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200 GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV Sbjct: 61 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119 Query: 201 YVSLRDEVSDSDSTIPAAEHR 221 + SD A + Sbjct: 120 KIMRG-----SDPDGKAGPQK 135 >gi|198456485|ref|XP_002136327.1| GA25150 [Drosophila pseudoobscura pseudoobscura] gi|198142674|gb|EDY71398.1| GA25150 [Drosophila pseudoobscura pseudoobscura] Length = 204 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 13/171 (7%) Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLI 116 T II+ + + ++G+KG I ++ + N I L +V + A Sbjct: 2 TPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQ 61 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 A+S+ +L + RRA ++ + GA G +V+ SG+L G + +++ +++G + + Sbjct: 62 AESLRYKLTGGLAVRRACYGVLRFIIESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IH 119 Query: 177 TLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 + DY T G GIKV + D + + Sbjct: 120 SGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPKNKIGPKKPLP 165 >gi|302748860|gb|ADL63910.1| ribosomal protein S3 [Malpighia glabra] Length = 466 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+ Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++ Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 SGR GAE++RTEC G+ IDY A T + Sbjct: 427 SGRSRGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRF 466 >gi|133907917|gb|ABO42418.1| ribosomal protein S3 [Rafflesia pricei] Length = 477 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + + I + + G +++K R LSN Sbjct: 320 KVMELIEKLINLGGIGE---WIKGIDMMIEILLRNSRIPYGYNSYLNEMQKRRSLLSNRQ 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVI 152 ++ + ++ +A+ IAQ I+ QL + +F + +K + M+ G +G+++ Sbjct: 377 KTQTLIESVKIQSVYQSASPIAQDISFQLRNKKSPYIFSQIVKD-LPLVMKKGVEGIRIC 435 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE +RTEC G+ IDY A T YG Sbjct: 436 CSGRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 477 >gi|224168293|ref|XP_002339135.1| predicted protein [Populus trichocarpa] gi|222874470|gb|EEF11601.1| predicted protein [Populus trichocarpa] Length = 95 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 120 IAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 I+ QL +R F + V+ M +G+++ SGRL GAE++ TEC G+ Sbjct: 1 ISFQLSNKRRSFSSIFSKIVKDLSLLMNKWVEGIRICCSGRLKGAEIAGTECGKYGKTSC 60 Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 IDY A T YG G+KV++S Sbjct: 61 NLFNQKIDYAPAEVSTPYGISGVKVWISY 89 >gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis] gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis] Length = 214 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 13/187 (6%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y I+E+ + L G + + I +I++ +P + G+K Sbjct: 12 ANGILYAE-------IKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFK 64 Query: 84 IEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 +++++ + N+ I++ +++V + + A I +++ V ++RA +++ Sbjct: 65 LKQLQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRN 124 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 GA G + SG+L G + T+ +LEG V Q + ++ T T G G+ Sbjct: 125 TKFAGATGCLITISGKLKGL-RACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQGVIGV 183 Query: 199 KVYVSLR 205 +V + L Sbjct: 184 QVSIMLP 190 >gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010] Length = 194 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 ++ + +K + + L +V ++A +S+ +L + RRA ++ M Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200 GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV Sbjct: 61 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119 Query: 201 YVSLRDEVSDSDSTIPAAEHR 221 + SD A + Sbjct: 120 KIMRG-----SDPDGKAGPQK 135 >gi|133907915|gb|ABO42417.1| ribosomal protein S3 [Quiina pteridophylla] Length = 454 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + + G +++K+R LSN T Sbjct: 295 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 351 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151 + + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++ Sbjct: 352 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKKRSLRSILSKIVKDIPLVMKKGVEGIRI 411 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G++ IDY A T YG Sbjct: 412 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYG 454 >gi|270708970|ref|ZP_06223149.1| ribosomal protein S3 domain protein [Haemophilus influenzae HK1212] gi|270315695|gb|EFA27857.1| ribosomal protein S3 domain protein [Haemophilus influenzae HK1212] Length = 46 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH 46 MGQK++P RLG+ W+S WFA ++ L D K+R++L Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKE 46 >gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 200 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 15/187 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ ++ + + + L V + A A+S+ +L + RRA ++ Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197 M GA GV+V SG+L A+ ++ + +G + L T +D + G G Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188 Query: 198 IKVYVSL 204 I+V + + Sbjct: 189 IRVKIMM 195 >gi|133907857|gb|ABO42388.1| ribosomal protein S3 [Guthriea capensis] Length = 456 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 8/161 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 300 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYAYLN---EMKKMRSLLSNRTNT 355 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 356 NTFIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSILSQIMKDIPLVMKKGVEGIRICC 415 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 416 SGRLEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYG 456 >gi|312232713|gb|ADQ53685.1| ribosomal protein S3 [Croton glandulosepalus] Length = 430 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 6/162 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR-PGLIIGKKGTDIEKIRKKLSNMTN 96 K+ E ++ + + ++ I+ II+ + R P ++ K+R LSN TN Sbjct: 270 KVMELIEKFISLGRIGEL-IKGIEMMIEIILRNRRIPYGWYNSYLNEMTKMRSLLSNRTN 328 Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVI 152 + +L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 329 TNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRIC 388 Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 389 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 430 >gi|312232689|gb|ADQ53673.1| ribosomal protein S3 [Croton curiosus] Length = 489 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---------DIEKIR 88 K+ E ++ + G+ ++ I + + G +++K+R Sbjct: 323 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRNRRIPYGYHFYLNGYRSYLNEMKKMR 379 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRF 144 LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+ Sbjct: 380 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKK 439 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 440 GVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 489 >gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3P [Caldivirga maquilingensis IC-167] gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis IC-167] Length = 236 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 4/192 (2%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 I+EYL L + +I+RT RI++ + + IIG+KG ++ + L + N Sbjct: 23 WMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFN 82 Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 + + V + P PE NA L+A IA + + + FRRA A++ G +VI SG Sbjct: 83 LDNVVIDVIQEPHPEYNARLVALRIADAMAKGIRFRRAAIIALRQLQEANVQGAEVIISG 142 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L E SR E Y G V Q + G ++V V D Sbjct: 143 KLT-TERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVRVLPPDAKLSDRF 201 Query: 214 TIPAAEHRVVEK 225 + + E V++ Sbjct: 202 EVKSPEEVQVKQ 213 >gi|312232663|gb|ADQ53660.1| ribosomal protein S3 [Croton argyrophyllus] Length = 413 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + ++ +I+ + +I + R +++K+R Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFFEMKKMRS 304 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413 >gi|288191221|gb|ADC43963.1| ribosomal protein S3 [Lachnostylis bilocularis] Length = 269 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS 140 +++K+R LSN T + + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 150 NEMKKMRSLLSNRTKTNTLIESVKIQSLYQSASPIAQDISFQLRNKTISFRSIFNQIVKD 209 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 M+ G +GV++ SGRL GAE++RTEC G+ IDY A T YG G Sbjct: 210 IPLEMKKGVEGVRICCSGRLEGAEIARTECRKYGKTSRNVFNQKIDYAPAEVSTPYGISG 269 >gi|302748543|gb|ADL63752.1| ribosomal protein S3 [Anisoptera marginata] Length = 453 Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 5/159 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ T II+ + R +++K++ LSN TN+ Sbjct: 296 KVIELIKKLINLGGIEEL-IKGTEMIMEIILRNRRIPYGYNSYLNEVKKMQSLLSNRTNT 354 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + +Q M+ G +G+++ Sbjct: 355 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIQLVMKKGVEGIRICC 414 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192 SGRL GAE++RTEC G+ IDY A T Sbjct: 415 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTR 453 >gi|302748802|gb|ADL63881.1| ribosomal protein S3 [Hydrophyllum virginianum] Length = 455 Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + + I+ II+ + R +++K+R LSN T++ Sbjct: 296 KVMELIEKFIDLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTST 354 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + + +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 355 NTLIESVRIQSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 414 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY +A T YG Sbjct: 415 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYG 455 >gi|255554452|ref|XP_002518265.1| 50S ribosomal protein L14, putative [Ricinus communis] gi|223542612|gb|EEF44151.1| 50S ribosomal protein L14, putative [Ricinus communis] Length = 236 Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 40/63 (63%) Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 MK+A++ + G++V GRL+G E++R E EGRVPLQT+RA IDY + T Y Sbjct: 1 MKKAIELTEQADTKGIQVQIVGRLDGKEIARFEWIREGRVPLQTIRAKIDYCSYTVRTIY 60 Query: 194 GSC 196 G+ Sbjct: 61 GAL 63 >gi|312232651|gb|ADQ53654.1| ribosomal protein S3 [Croton alamosanus] gi|312232745|gb|ADQ53701.1| ribosomal protein S3 [Croton lindheimerianus] gi|312232747|gb|ADQ53702.1| ribosomal protein S3 [Croton lindheimeri] Length = 413 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + ++ +I+ + +I + R +++K+R Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFIEMKKMRS 304 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413 >gi|133907873|gb|ABO42396.1| ribosomal protein S3 [Koilodepas bantamense] Length = 492 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 5/160 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 + E ++ L + ++ I+ + II+ R +++K+R LSN TN+ Sbjct: 334 VMELIEKFLNLGRIGEL-IKGIYMMKEIILRKRRIPYGYNSYLNEMKKMRSLLSNRTNTN 392 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIAS 154 + ++ +A+ IAQ I+ QL + FR + + M+ G +G+++ S Sbjct: 393 TLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIEKDIPLVMKKGVEGIRISCS 452 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE++RTEC G+ IDY A T YG Sbjct: 453 GRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 492 >gi|222446780|gb|ACM51435.1| ribosomal protein S3 [Caulerpa filiformis] Length = 49 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 31/49 (63%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++PI FRLG T +S+WFA + Y L ED IR+ L + K+ Sbjct: 1 MGQKVHPIGFRLGQTQTHSSQWFAAKNNYSQFLLEDHFIRQMLLKYSKK 49 >gi|133907901|gb|ABO42410.1| ribosomal protein S3 [Passiflora coccinea] Length = 466 Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98 + ++ K + +I I + + G ++ K+R LSN TN+ Sbjct: 307 KVIELIEKFRNLGRIGELIKGIEMMIEIILRNRIIPYGYNSYLNEMTKMRSLLSNRTNTN 366 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ S Sbjct: 367 TLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCS 426 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE++RTEC G+ L IDY A T YG Sbjct: 427 GRLEGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 466 >gi|133907841|gb|ABO42380.1| ribosomal protein S3 [Erythrococca sp. Cheek s.n.] Length = 503 Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ + I + + G +++K+R LSN T Sbjct: 344 KVMELIDKFINLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 400 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 ++ + ++ +A IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 401 KTQTLIESIKMKSVYQSAFPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 460 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 461 CCSGRLEGAEIARTECGKYGKTFRNVFNQKIDYAPAEVSTPYG 503 >gi|288191271|gb|ADC43988.1| ribosomal protein S3 [Averrhoa carambola] Length = 466 Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G L I + + R +++K+R LSN T+ Sbjct: 307 KVMELIEK-FINLGGIGELXXGIXXMIEIXLXNXRIPYXXNXYLNEVKKMRSLLSNRTSP 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466 >gi|288191217|gb|ADC43961.1| ribosomal protein S3 [Croizatia brevipetiolata] Length = 269 Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN T + + ++ +A+ IAQ I+ +L + FR + + V+ Sbjct: 150 NEMKKMRSLLSNRTKTNTLIESVKIQSLYQSASPIAQDISLKLRNKTRSFRSILNQIVKD 209 Query: 141 AMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 GV++ SGRL GAE++RTEC G+ L IDY A T YG G Sbjct: 210 IPLVMKKRVEGVRICCSGRLKGAEIARTECGKYGKTSLHVFNQKIDYAPAEVSTPYGISG 269 >gi|288191124|gb|ADC43915.1| ribosomal protein S3 [Licania michauxii] Length = 386 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92 IR+ L+ AG K I + + K KK+ Sbjct: 223 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 280 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148 N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G Sbjct: 281 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 340 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 341 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 386 >gi|133907819|gb|ABO42369.1| ribosomal protein S3 [Chrysobalanus icaco] Length = 389 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92 IR+ L+ AG K I + + K KK+ Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148 N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >gi|154334600|ref|XP_001563547.1| 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 219 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L + G + + T I++ + + ++G G I ++ ++ N Sbjct: 22 EFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V V ++A +S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + ++ +D G G+KV + L + + + Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLPGDSTGRNGPS 200 Query: 216 PAAEH 220 Sbjct: 201 EPLPD 205 >gi|133907789|gb|ABO42354.1| ribosomal protein S3 [Atuna racemosa] Length = 389 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92 IR+ L+ AG K I + + K KK+ Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148 N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >gi|146082044|ref|XP_001464434.1| 40S ribosomal protein S3 [Leishmania infantum JPCM5] gi|146097654|ref|XP_001468174.1| 40S ribosomal protein S3 [Leishmania infantum] gi|157866908|ref|XP_001682009.1| 40S ribosomal protein S3 [Leishmania major strain Friedlin] gi|157874873|ref|XP_001685848.1| 40S ribosomal protein S3 [Leishmania major strain Friedlin] gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain Friedlin] gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain Friedlin] gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5] gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5] gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana MHOM/GT/2001/U1103] gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 219 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L + G + + T I++ + + ++G G I ++ ++ N Sbjct: 22 EFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V V ++A +S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + +++ + +G + ++ +D G G+KV + L + + + Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLPGDSTGRNGPS 200 Query: 216 PAAEH 220 Sbjct: 201 EPLPD 205 >gi|267847204|gb|ACY80734.1| ribosomal protein S3 [Codium parvulum] Length = 52 Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 28/51 (54%), Positives = 37/51 (72%) Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GR NGAE++RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 GRFNGAEIARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 51 >gi|133907897|gb|ABO42408.1| ribosomal protein S3 [Parnassia grandifolia] Length = 480 Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 379 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 380 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 439 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 440 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480 >gi|133907859|gb|ABO42389.1| ribosomal protein S3 [Hirtella bicornis] Length = 389 Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%) Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92 IR+ L+ AG K I + + K KK+ Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148 N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343 Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389 >gi|133907855|gb|ABO42387.1| ribosomal protein S3 [Garcinia hessii] Length = 366 Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ G+ LI+ II+ + R +++K+R +SN T + Sbjct: 207 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 265 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++ Sbjct: 266 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSIFTKIVKDILFVMKNGLEGIRICC 325 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GA+++RTEC G+ IDY A T YG Sbjct: 326 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYG 366 >gi|312232701|gb|ADQ53679.1| ribosomal protein S3 [Croton eremophilus] Length = 211 Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++ +R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 95 FKMKFMRSLLSNRTNTNTYLEPVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 154 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 155 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 211 >gi|297672638|ref|XP_002814396.1| PREDICTED: 40S ribosomal protein S3-like [Pongo abelii] Length = 268 Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 25/187 (13%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+L L + G + + + T II+ + R I+G+KG I ++ + Sbjct: 66 EFLTQELAEDGYSGVEVRVTPTRTEIIILATRTQSILGEKGRRIRELTAIVQKRFGFREG 125 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 + +++L + RRA ++ M GA G KV+ SG+L G Sbjct: 126 ---------------SVELYSEKLLGGLAVRRACYGVLRFIMESGAKGCKVVVSGKLRG- 169 Query: 161 ELSRTECYLEGRVPLQTLRA---HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 + +++ +++G + + + A ++D G GIKV + D T Sbjct: 170 QRAKSMKFVDGLM-IHSGDAVNYYVDTAVCHVLLRQGVLGIKVKIM-----LPWDPTGKT 223 Query: 218 AEHRVVE 224 + + Sbjct: 224 GPKKPLP 230 >gi|133907785|gb|ABO42352.1| ribosomal protein S3 [Acharia tragodes] Length = 476 Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 317 KVMELIDKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ +L + FR + + + M+ G +G+++ Sbjct: 376 NTLIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSILSQIMKDIPLVMKKGVEGIRICC 435 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 436 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTPYG 476 >gi|312232653|gb|ADQ53655.1| ribosomal protein S3 [Croton andinus] gi|312232793|gb|ADQ53725.1| ribosomal protein S3 [Croton pedicellatus] gi|312232831|gb|ADQ53744.1| ribosomal protein S3 [Croton tenuilobus] Length = 429 Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 270 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTKT 328 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ Sbjct: 329 NTLIESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL G E++RTEC G+ IDY A T YG Sbjct: 389 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429 >gi|288191249|gb|ADC43977.1| ribosomal protein S3 [Scyphostegia borneensis] Length = 272 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ L G+ ++ I+ II+ + R +++K+R L N TN+ Sbjct: 117 KVMELIEKFLNLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLYNRTNT 175 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153 + ++P +A+LIAQ I+ QL + FR + + M+ G +G+++ Sbjct: 176 NTLIESVKIPSFYQSASLIAQDISFQLRNKTRAFRSIFSQIVKDISLVMKKGVEGIRISC 235 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G++ IDY A Sbjct: 236 SGRLEGAEIARTECGKYGKLSCNVFNQKIDYAPAEV 271 >gi|130076582|gb|ABO31949.1| ribosomal protein S3 [Myriophyllum sp. Qiu 95020] Length = 467 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 22/187 (11%) Query: 29 YGALLHEDL------KIREYLQCHLKQAGVAKILIE----------RTHKNCRIIVYSAR 72 Y L ED K+R+ + +++ V +++ + + I + Sbjct: 281 YKKLFFEDAREQLLGKLRKRFRNLMRKNKVMELIDKFIDLGGIGELKKGIEMMIEIILRN 340 Query: 73 PGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV- 129 + G ++K+R LSN TN+ + ++ +A+LIAQ I+ Q + Sbjct: 341 RRIPYGYNSYLNKVKKMRSSLSNRTNTNTLIESVKIASVYQSASLIAQDISFQPRNKTRS 400 Query: 130 FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186 FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ P IDY Sbjct: 401 FRSIFSQIVKDIPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTPRNVFNQKIDYAP 460 Query: 187 AVAETAY 193 A T Y Sbjct: 461 AEVSTRY 467 >gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO] Length = 184 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 11/159 (6%) Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + G++ ++ + +K I L V ++A A+S+ +L + RRA Sbjct: 4 VKNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAA 63 Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETA 192 V+ M GA G +V+ SG+L A ++ + +G + Q + ID T Sbjct: 64 YGVVRYVMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMR 122 Query: 193 YGSCGIKVYVSL--------RDEVSDSDSTIPAAEHRVV 223 G GIKV + + D+ + I E + Sbjct: 123 QGVLGIKVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 161 >gi|312232849|gb|ADQ53753.1| ribosomal protein S3 [Croton yucatanensis] Length = 413 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + ++ +I+ + +I + R +++K+R Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFFEMKKMRS 304 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD- 147 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKR 364 Query: 148 --GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413 >gi|312232723|gb|ADQ53690.1| ribosomal protein S3 [Croton heterocalyx] Length = 484 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 9/161 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 +I E ++ + +I + +++K+R LSN TN+ Sbjct: 329 RIGELIKGIEMMIKIILRNRRIRIVKRKIRI-----PYRYNFYFFEMKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 +L ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++ Sbjct: 384 NTYLESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 444 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484 >gi|133907939|gb|ABO42429.1| ribosomal protein S3 [Trigonia nivea] Length = 474 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 7/171 (4%) Query: 31 ALLHEDLKIREYLQCHLKQAGVA---KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 L+ +D I E + + + K + II+ + R +++K+ Sbjct: 304 NLMGKDKVIMELIDIFISLGRIGELIKGIEIMIEMMIEIILRNRRIPYGYNSYLNEMKKM 363 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MR 143 R LSN TN+ + ++ +A+LIAQ I+ QL + FR + V+ M+ Sbjct: 364 RSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMK 423 Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G +G+++ SGRL G+E++RTEC G+ IDY A T YG Sbjct: 424 KGVEGIRICCSGRLEGSEIARTECGKYGKTSRNVFNQKIDYALAEVSTRYG 474 >gi|224999236|gb|ACN78390.1| ribosomal protein S3 [Codium fragile] Length = 53 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 36/51 (70%) Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GR NGA+++RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 2 GRFNGADIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 52 >gi|312232799|gb|ADQ53728.1| ribosomal protein S3 [Croton polyandrus] Length = 486 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 370 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 429 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 430 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 486 >gi|302749041|gb|ADL64000.1| ribosomal protein S3 [Sphenoclea zeylanica] Length = 476 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ ++ + + ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 317 KVMXLIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSFLSNRTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ Q R FR + + V++ M+ G +G+++ Sbjct: 376 NTNIESVKIKSVYQSASPIAQDISFQPRNQRGSFRSILSQIVKNIPFEMKKGVEGIRICC 435 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR +GAE++RTEC G+ +DY A T YG Sbjct: 436 SGRSSGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYG 476 >gi|254726305|ref|ZP_05188087.1| 30S ribosomal protein S3 [Bacillus anthracis str. A1055] Length = 56 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%) Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 E Y EG VPL TLRA IDY A+T YG G+KV++ + + Sbjct: 2 ESYSEGTVPLHTLRADIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 56 >gi|312232811|gb|ADQ53734.1| ribosomal protein S3 [Croton salutaris] Length = 484 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 9/161 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 +I E ++ + +I + +++K+R LSN TN+ Sbjct: 329 RIGELIKGIEMMIKIILRNRRIRIVKRKIRI-----PYRYNFYFFEMKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 +L ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++ Sbjct: 384 NTYLESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RTEC G+ IDY A T YG Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484 >gi|130076596|gb|ABO31956.1| ribosomal protein S3 [Sedum humifusum] Length = 479 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + + I + + G +++K+R LSN T Sbjct: 320 KVMELIEKFIDLGEIGEF---LKGIEMMIEIILRNKRIPYGYNSYLNEVKKMRSLLSNRT 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 377 NTNTLIQSVKIQSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 436 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 437 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479 >gi|312232667|gb|ADQ53662.1| ribosomal protein S3 [Croton billbergianus] Length = 415 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + + ++I+ +N RI++ + +++K+R Sbjct: 247 KVMELIEKFINLGRIGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYLNEMKKMRS 306 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFG 145 LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+ G Sbjct: 307 LLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKG 366 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 367 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415 >gi|312232825|gb|ADQ53741.1| ribosomal protein S3 [Croton skutchii] Length = 415 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + V + ++I+ +N RI++ + ++ K+R Sbjct: 247 KVMELIEKFINLGRVGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYFFEMTKMRS 306 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ +L ++ +A+ IAQ I+ +L + FR + V+ M+ G Sbjct: 307 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPLVMKKG 366 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 367 VEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415 >gi|223927941|gb|ACN23613.1| ribosomal protein S3 [Halimeda discoidea] Length = 135 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK+ + FRLG+ S+W+A Y + ED +R L K+A KI I R Sbjct: 1 MGQKVXXLGFRLGITQPXLSQWYASKRYYSKYVLEDXFVRTJLSEKYKRAKFEKIHISRK 60 Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112 + I++++ +P ++IGKK ++ +K++ + + + + +I+ Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYXFQYRQIEWNSKLKVIIYXFRXKIH 120 Query: 113 ATLIAQSIAQQLERR 127 A+ IA I + E+R Sbjct: 121 ASSIADFIVEHXEKR 135 >gi|312232751|gb|ADQ53704.1| ribosomal protein S3 [Croton luetzelburgii] Length = 427 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%) Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99 E ++ G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 270 MELIEKFRNLGGIGEL-IKGIEMMIEIILRNKRIPYGYNSYLNEMKKMRSLLSNRTNTNT 328 Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155 + ++ +A+ IAQ I+ QL + FR + V+ M+ G DG+++ SG Sbjct: 329 LIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVDGIRICCSG 388 Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 RL GAE++RT+C G+ IDY A T YG Sbjct: 389 RLEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 427 >gi|133907879|gb|ABO42399.1| ribosomal protein S3 [Lunania parviflora] Length = 467 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I II+ + R +++K+R LSN TN+ Sbjct: 308 KVMELIDNFINLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ +L + FR + V+ M G +G+++ Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPLVMIKGVEGIRICC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 427 SGRSKGAEIARTECGKYGKTYHNVFFQKIDYAPAEVSTRYG 467 >gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum] Length = 240 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I + + N + Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRSLTSVVQKRFNFKEN 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD-GVKV-IASG 155 + L +V + A A+S+ +L + RRA ++ M G G +V SG Sbjct: 84 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGTPTGCEVDSVSG 143 Query: 156 RLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYVSL 204 +L A+ +++ +G + L ++D G GIKV + L Sbjct: 144 KLR-AQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLLRQGVLGIKVKIML 193 >gi|312232665|gb|ADQ53661.1| ribosomal protein S3 [Croton atrostellatus] Length = 414 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 298 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 357 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 358 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 414 >gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20] gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20] Length = 194 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 7/168 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++++ + L + Sbjct: 1 MIKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGV 60 Query: 98 EI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153 E + +++V PE+ ++A IA + + + FRR A++ GA G +++ Sbjct: 61 ENPQIDVIDISKVDVPEMFPKVVAYRIANAMAKGIRFRRVAFIAIRQVTEAGARGFELVI 120 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIK 199 SG+L+ E ++ E Y G+V + + G GIK Sbjct: 121 SGKLS-TERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLKPGIYGIK 167 >gi|312232841|gb|ADQ53749.1| ribosomal protein S3 [Croton warmingii] Length = 415 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E + + + + ++I+ +N RI++ + +++K+R Sbjct: 247 KVMELIDKFINLGRIGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYLNEMKKMRS 306 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFG 145 LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+ G Sbjct: 307 LLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKG 366 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 367 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415 >gi|312232821|gb|ADQ53739.1| ribosomal protein S3 [Croton serratifolius] Length = 415 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%) Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIV---YSARPGLIIGKKGTDIEKIR 88 K+ E ++ + + + ++I +N RI++ + R ++ +R Sbjct: 246 KVMELIEKFINLGRIGELIKGIEMMIFIILRNRRILIKKKRNKRIPYRYNSFVFKMKFMR 305 Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRF 144 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ Sbjct: 306 SLLSNRTNTNTYLEPVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKK 365 Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 366 GVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415 >gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii] gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii] Length = 246 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E L L G + I + II+ + I+G +G I++I KK Sbjct: 52 ELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILGSRGRRIKEINGLIKKRFQFDEK 111 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + + V ++ + A A+S+ +L R +V RRA ++S M GA G + SG+L Sbjct: 112 SLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKSTMESGAKGCIISVSGKL 171 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ ++T +++G + + + +I+ T G GIK+ + L Sbjct: 172 R-AQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQGVIGIKISIMLP 220 >gi|312232769|gb|ADQ53713.1| ribosomal protein S3 [Croton milleri] Length = 420 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 304 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 363 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 364 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 420 >gi|73987944|ref|XP_860415.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 7 [Canis familiaris] Length = 196 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 10/152 (6%) Query: 72 RPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128 R ++G+KG I ++ + + L +V + A A+S+ +L + Sbjct: 7 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 66 Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGT 186 RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D Sbjct: 67 AVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAV 125 Query: 187 AVAETAYGSCGIKVYVSLR----DEVSDSDST 214 G GIKV + L ++ Sbjct: 126 RHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 157 >gi|223927290|gb|ACN23258.1| ribosomal protein S3 [Halimeda heteromorpha] Length = 222 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 21/168 (12%) Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYS 70 LG+ S+W+A Y L ED +R L +AG I I R + I++ + Sbjct: 1 LGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRKIENHIEIVIRA 60 Query: 71 ARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL--------------- 115 +P + IGKKG +++ +K++ + + +N+ + + L Sbjct: 61 QKPEIFIGKKGENLKNFQKEIKKLIFK--YRGLNQSRNAQSKSKLRVILHVIRCQTGASS 118 Query: 116 IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160 IA + + LE+R+ ++ K+ ++ + S ++ + Sbjct: 119 IADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSTVSTSIDSS 166 >gi|302748883|gb|ADL63921.1| ribosomal protein S3 [Morina longifolia] Length = 460 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 5/164 (3%) Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91 L E K+ E ++ + G+ ++ I+ II+ + R +++K+R L Sbjct: 298 NLMEKDKVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 356 Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147 SN T + + ++ +A+ IAQ I+ Q + + FR + V+ M+ G + Sbjct: 357 SNRTKTNTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKEIPLVMKKGVE 416 Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191 G+++ SGR GAE++RTEC G+ IDY A T Sbjct: 417 GIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVST 460 >gi|133907821|gb|ABO42370.1| ribosomal protein S3 [Clusia rosea] Length = 328 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + + I + + G +++K+R +SN T Sbjct: 169 KVMELIEKFINLGLIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRT 225 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 + + ++ +A+ IAQ I+ +L +R FR + + V+ M+ G +G+++ Sbjct: 226 KTNTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSILSQIVKDILFVMKKGLEGIRI 285 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GA+++RTEC G+ IDY A T YG Sbjct: 286 CCSGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYG 328 >gi|312232715|gb|ADQ53686.1| ribosomal protein S3 [Croton glandulosus] Length = 431 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E + + +I+++R + Y + I ++K+R LSN TN+ + Sbjct: 274 EMIIKIFLRNRRIRIIVKRNRRIPYRYNYYLYKMIKINFYLYKMQKMRSLLSNRTNTNTY 333 Query: 101 LSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGR 156 L ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ SGR Sbjct: 334 LESVKIKSVYQSASPIAQDISFQLRNKKRAFRSIFSQIVKDIPLVMKKGVEGIRICCSGR 393 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 L G E++RTEC G+ IDY A T YG Sbjct: 394 LEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 431 >gi|312232691|gb|ADQ53674.1| ribosomal protein S3 [Croton dioicus] Length = 470 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 354 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 413 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 414 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470 >gi|312232705|gb|ADQ53681.1| ribosomal protein S3 [Croton floribundus] Length = 420 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 304 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 363 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 364 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 420 >gi|312232655|gb|ADQ53656.1| ribosomal protein S3 [Croton argenteus] Length = 421 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 305 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 365 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421 >gi|154343872|ref|XP_001567880.1| 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 219 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L + G + + T I++ + + ++G G I ++ ++ N Sbjct: 22 EFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V V ++A +S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ + +G + ++ +D G G+KV + L Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLP 190 >gi|312232801|gb|ADQ53729.1| ribosomal protein S3 [Croton polyandrus] Length = 421 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 305 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG Sbjct: 365 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421 >gi|133907867|gb|ABO42393.1| ribosomal protein S3 [Hymenanthera alpina] Length = 475 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 316 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 374 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR +++ + M+ G +G+++ Sbjct: 375 NTLIESVKIQSVYQSASLIAQEISFQLRNKKREFRSILSQIQKDIPLVMKKGVEGIRICC 434 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RT+C G+ IDY A T YG Sbjct: 435 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYG 475 >gi|114590693|ref|XP_001140437.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 4 [Pan troglodytes] Length = 231 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 17/186 (9%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+L L + G + + ++ T II+ + R I G+KG I ++ + Sbjct: 23 EFLTQELAEDGYSGVEVQVTPTRTEIIILATRTQNIPGEKGRRIRELTAIVQKRFG---- 78 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 P+ + A A+S+ +L + RRA ++ M GA G KV+ASG+L G Sbjct: 79 -----FPEGSLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVASGKLRG- 132 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 + +++ +++G + + ++ G GIKV D T Sbjct: 133 QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIKVKFM-----LPWDPTGKTG 187 Query: 219 EHRVVE 224 + + Sbjct: 188 PKKPLP 193 >gi|312232789|gb|ADQ53723.1| ribosomal protein S3 [Croton olivaceus] Length = 266 Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G ++ I+ +II+ + R +++K+R LSN TN+ Sbjct: 107 KVIELIEKFINLGGKGEL-IKGIEMMIKIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 165 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 166 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 225 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE +RT C G+ IDY A T YG Sbjct: 226 SGRLEGAERARTACGKYGKTSRNVFNQKIDYAPAEVSTRYG 266 >gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus] Length = 206 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 6/160 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195 G + +++ +++G + + ++D G Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 181 >gi|312232709|gb|ADQ53683.1| ribosomal protein S3 [Croton fuscescens] gi|312232835|gb|ADQ53746.1| ribosomal protein S3 [Croton triqueter] Length = 421 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 305 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 365 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421 >gi|312232763|gb|ADQ53710.1| ribosomal protein S3 [Croton micans] Length = 418 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 302 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 361 Query: 141 AMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 362 IPLVMKKRVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 418 >gi|301088585|ref|NP_852625.2| ribosomal protein S3 [Eimeria tenella strain Penn State] gi|301078342|gb|AAO40226.2| ribosomal protein S3 [Eimeria tenella] Length = 208 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 19/216 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRW------FARGSEYGALLHEDLKIREYLQCHLKQAGVAK 54 MGQK+NP++FR + + W + + L + + KQ + Sbjct: 1 MGQKVNPLIFRSKNFPYYINIWNNFKLTYINIKFFLNL--------QLFTKNKKQLNILY 52 Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEI 111 I + + N I LI K I K K + ++ + + P I Sbjct: 53 IQNKYYYNNYYIYNIILYSKLIYLKNKQYINKYFIKFIQKNYLKKNKFTFNFVVLKHPLI 112 Query: 112 NATLIAQSIAQQ-LERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYL 169 + I + + + L + R+ + + + + G K I SG++NG+++++ E + Sbjct: 113 STYFILKYLYNKILYTKNSLRKIIPQIILLINKKYKIKGFKCIISGKINGSQMAKIETFK 172 Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LQ ++ Y + T YG GIK+++ L Sbjct: 173 FNESSLQNKILNVKYNSIDVITKYGLLGIKIWLFLN 208 >gi|312232721|gb|ADQ53689.1| ribosomal protein S3 [Croton guildingii subsp. tiarensis] Length = 426 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 4/158 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E + +I+++R + Y + I + K+R LSN TN+ + Sbjct: 269 EMIIKIFLINRRIRIIVKRNRRIPYRYNYYLYKMIKIRFYLYKMHKMRSLLSNRTNTNTY 328 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGR 156 L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ SGR Sbjct: 329 LESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICCSGR 388 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 L G E++RTEC G+ IDY A T YG Sbjct: 389 LEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426 >gi|133907805|gb|ABO42362.1| ribosomal protein S3 [Byrsonima crassifolia] Length = 467 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + +I+K+R LSN TN+ Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILIKRKIPYGYNSYLNEIQKMRSLLSNRTNT 366 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKRVKDIPLVMKKGVEGIRISC 426 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGR GAE++RTEC G+ IDY A T YG Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467 >gi|312232659|gb|ADQ53658.1| ribosomal protein S3 [Croton argyranthemus] Length = 288 Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 172 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 231 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 232 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 288 >gi|312232791|gb|ADQ53724.1| ribosomal protein S3 [Croton pachysepalus] Length = 282 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 166 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 225 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG Sbjct: 226 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 282 >gi|133907875|gb|ABO42397.1| ribosomal protein S3 [Leonia glycycarpa] Length = 476 Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +I+K+R LSN TN+ Sbjct: 317 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEIQKMRSLLSNKTNT 375 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153 + ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++ Sbjct: 376 NTLIESVKIQSVYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 435 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 SGRL GAE++RT+C G+ IDY A T YG Sbjct: 436 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTHYG 476 >gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01] gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01] Length = 214 Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 6/172 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95 ++E + L G + + + ++I+ +P +IG K I +I+ ++ Sbjct: 20 LKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQIQHLVASRLSLP 79 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 +S + + +++V + + A I +++ + +RA +++ GA G V SG Sbjct: 80 DSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKFAGATGCLVTISG 139 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +L G + T+ +LEG V Q R ++ T G GI+V + L Sbjct: 140 KLKGL-RACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQGVIGIQVSIMLP 190 >gi|302748533|gb|ADL63747.1| ribosomal protein S3 [Alseuosmia macrophylla] Length = 431 Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 6/165 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 L+ +D K+ + ++ + G+ ++ I+ II+ + + +++K+R Sbjct: 269 NLIAKD-KVMKLIEKLIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNFYLNEVKKMRSL 326 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRA---VQSAMRFGA 146 LSN T + ++ ++ +A+ IAQ I+ Q + FR + ++ M+ G Sbjct: 327 LSNRTKTNTNIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIRLVMKKGV 386 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191 +G+++ SGR GAE++RTEC G+ IDY A T Sbjct: 387 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVST 431 >gi|73987946|ref|XP_860451.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 8 [Canis familiaris] Length = 191 Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 7/164 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG-SCGI 198 G + +++ +++G + + ++D G G+ Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGEQLGV 185 >gi|133907941|gb|ABO42430.1| ribosomal protein S3 [Turnera ulmifolia] Length = 481 Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++ K+R LSN TN+ + ++ +A+LIAQ I+ QL + FR + V+ Sbjct: 365 NEMTKMRSLLSNRTNTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKD 424 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G G+++ SGRL GAE++RTEC G+ L IDY A T YG Sbjct: 425 IPLVMKKGVGGIRICCSGRLEGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 481 >gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500] Length = 221 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 12/201 (5%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 F + + W F + A L+E L RE+ K G + + ++ + II+ Sbjct: 4 FTIKIEKKWRVV-FVADGVFHAELNE-LFTREF----NKDEGYSGVELKTGPASTEIIIR 57 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLER 126 +++ I+G+ I ++ + + L +V + A A S+ +L Sbjct: 58 ASKTQAIVGQNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLL 117 Query: 127 RVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDY 184 + RRA V M GA G +VI SG+L A+ ++ + +G + Q + +D+ Sbjct: 118 GLPVRRACYAIVHQIMTKGAKGCEVIVSGKLR-AQRAKAMKFTDGYMIKSGQPSQNMVDF 176 Query: 185 GTAVAETAYGSCGIKVYVSLR 205 G+ G+KV + L Sbjct: 177 ACCHVLLRQGTLGVKVAIMLP 197 >gi|312232843|gb|ADQ53750.1| ribosomal protein S3 [Croton watsonii] Length = 411 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%) Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSAR--PGLIIGKKGTDIEKIRK 89 K+ E ++ + + ++ +I+ + +I + R +++K+R Sbjct: 243 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFSFFEMKKMRS 302 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD- 147 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 303 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKR 362 Query: 148 --GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 G+++ SGRL GAE++RTEC G+ I+Y A T YG Sbjct: 363 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIEYAPAEVSTRYG 411 >gi|288191158|gb|ADC43932.1| ribosomal protein S3 [Pimelodendron zoanthogyne] Length = 485 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTISFRSIFSKIVKDIPLVMKKGVEGIRICC 448 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G+ IDY A Sbjct: 449 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 484 >gi|302749067|gb|ADL64013.1| ribosomal protein S3 [Swietenia macrophylla] Length = 480 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G+ IDY A Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEV 479 >gi|302749029|gb|ADL63994.1| ribosomal protein S3 [Sesamum triphyllum] Length = 483 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 325 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL +R FR + V++ M+ G G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSIFSKIVKNIPLVMKKGVTGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 + GAE++RTEC G+ IDY A T Y Sbjct: 444 AVGSVGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRY 483 >gi|296208655|ref|XP_002751192.1| PREDICTED: 40S ribosomal protein S3-like [Callithrix jacchus] Length = 242 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 7/170 (4%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + + ++G+KG I ++ + Sbjct: 23 ELLTRELAEDGYSGVEVRVTPTRKEIIILATKTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +VP +L Q + +L + RRA ++ M G +V+ SG+L Sbjct: 83 SVELYAEKVPLEVCAQSLR-QYLHHKLLGGLAVRRACYGVLRFIMESRTKGCEVVVSGKL 141 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + +++ +++G + + ++D G GIKV V L Sbjct: 142 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVRGIKVKVMLP 190 >gi|147667134|gb|ABQ45849.1| ribosomal protein S3 [Malus x domestica] Length = 51 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 35/51 (68%) Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 ++G E++R E EGRVPLQT+RA IDY + T YG GIK+++ + +E Sbjct: 1 IDGKEIARVEWIREGRVPLQTIRAKIDYCSYAVRTIYGVLGIKIWIFVDEE 51 >gi|302748675|gb|ADL63818.1| ribosomal protein S3 [Crossosoma californicum] Length = 486 Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 4/160 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 328 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 386 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADG--VKVIAS 154 + ++ +A+ IAQ I+ QL +R FR + V+ G +++ S Sbjct: 387 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGEGIRICCS 446 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 GRL GAE++RTEC G+ +Y A T YG Sbjct: 447 GRLKGAEIARTECGKYGKTSRYVFNQENNYAPAEVSTRYG 486 >gi|224999229|gb|ACN78386.1| ribosomal protein S3 [Codium fragile] Length = 52 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 35/50 (70%) Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 R NGA+++RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 2 RFNGADIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 51 >gi|312232805|gb|ADQ53731.1| ribosomal protein S3 [Croton punctatus] Length = 276 Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 160 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 219 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 220 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 276 >gi|302749073|gb|ADL64016.1| ribosomal protein S3 [Tapiscia sinensis] Length = 480 Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ I++ + + +++K+R LSN TN+ Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEILLRNRKMPYGYNYYLNEVKKMRSLLSNRTNT 383 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G+ IDY A Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 479 >gi|312232727|gb|ADQ53692.1| ribosomal protein S3 [Croton hirtus] Length = 418 Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 302 YKMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 361 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG Sbjct: 362 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 418 >gi|312232765|gb|ADQ53711.1| ribosomal protein S3 [Croton michauxii var. elliptica] gi|312232767|gb|ADQ53712.1| ribosomal protein S3 [Croton michauxii var. elliptica] Length = 288 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 172 NKMKKMRSLLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 231 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG Sbjct: 232 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 288 >gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS] gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS] gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica HM-1:IMSS] gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica HM-1:IMSS] Length = 244 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72 ++ F A G Y L E LQ L G + + + + +II+ + R Sbjct: 19 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 68 Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 IIG KG I ++ +I L V +V + A+SI ++ + Sbjct: 69 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 128 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187 RRA+ ++ M GA G +V SG+L G + ++ + EG + R Sbjct: 129 VRRAVGSVMRLIMDSGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 187 Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 G GIKV + L + S + Sbjct: 188 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 220 >gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis] Length = 166 Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 8/146 (5%) Query: 66 IIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122 II+ + R ++G+KG I ++ +K N+ + L +V + A A+S+ Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60 Query: 123 QLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI 182 +L + RRA ++ M GA G +V+ SG+L G + +++ +++G + + + Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCN 118 Query: 183 DY---GTAVAETAYGSCGIKVYVSLR 205 DY T G GIKV + L Sbjct: 119 DYVNTATRHVLLRQGVLGIKVKIMLP 144 >gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760] gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760] Length = 244 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72 ++ F A G Y L E LQ L G + + + + +II+ + R Sbjct: 19 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 68 Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 IIG KG I ++ +I L V +V + A+SI ++ + Sbjct: 69 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 128 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187 RRA+ ++ M GA G +V SG+L G + ++ + EG + R Sbjct: 129 VRRAVGSVMRLIMESGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 187 Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 G GIKV + L + S + Sbjct: 188 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 220 >gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis] Length = 229 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 75/186 (40%), Gaps = 11/186 (5%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NS 97 E L+ L + G + I++ TH +I+ + + ++G + I ++ + Sbjct: 23 EMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLGDESKRIRELTSLIEKRFAFEQG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L ++V I+A A+S+ +L + R+A ++ M A G +VI SG++ Sbjct: 83 TLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACYAVLKQIMESEAKGGEVIVSGKI 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215 G + ++ + +G + + +I G GIKV + D D Sbjct: 143 KG-QRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQGILGIKVKIM-----LDHDPAG 196 Query: 216 PAAEHR 221 + Sbjct: 197 KTGCKK 202 >gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum] Length = 202 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 11/176 (6%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPE 110 K + + K +I+ + + ++G+ I ++ L + L ++ Sbjct: 10 KRKVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRG 69 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A A+S+ +L + R+A ++ M GA G +VI SG++ G + ++ + + Sbjct: 70 LSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKG-QRAKAMKFCD 128 Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 G + + ++D + G GIKV + D DS+ + + Sbjct: 129 GLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSGKKGPRKPLP 179 >gi|288191126|gb|ADC43916.1| ribosomal protein S3 [Endodesmia calophylloides] Length = 261 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+ Sbjct: 106 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRKISYRYNSYLNEMKKMRSLLSNRTNT 164 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL ++R FR + +Q M+ G+++ Sbjct: 165 NTLIESVKIQSVYQSASPIAQDISFQLRKKRRSFRSIFSKILQDIPLVMKKRVKGIRICC 224 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GA+++RTEC G+ IDY A Sbjct: 225 SGRLKGAKIARTECGNYGKTSRNVFNQKIDYAPAEV 260 >gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760] gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760] Length = 250 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72 ++ F A G Y L E LQ L G + + + + +II+ + R Sbjct: 25 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 74 Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 IIG KG I ++ +I L V +V + A+SI ++ + Sbjct: 75 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 134 Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187 RRA+ ++ M GA G +V SG+L G + ++ + EG + R Sbjct: 135 VRRAVGSVMRLIMESGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 193 Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 G GIKV + L + S + Sbjct: 194 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 226 >gi|302748812|gb|ADL63886.1| ribosomal protein S3 [Fouquieria columnaris] Length = 465 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 6/163 (3%) Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146 LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421 Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 +G+++ SGR GAE++RTEC G+ IDY A Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 464 >gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium] gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium] Length = 210 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 87/187 (46%), Gaps = 6/187 (3%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLII---GKKGTDIEKIRKKLSNMT 95 + E L L++ G + + ++++ +I+ + R +I GK+ +I + KK + Sbjct: 18 VNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGKRIREITLLVKKRFGLE 77 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155 +S +++ V +V + +++ A+ + +L + + R+A ++S M GA G + SG Sbjct: 78 DSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLRSIMESGAKGCLITISG 137 Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 +L A+ +++ + EG + Q ++ +I T G GIK+ + L + Sbjct: 138 KLR-AQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQGVIGIKISIMLPWDPYGKKG 196 Query: 214 TIPAAEH 220 + Sbjct: 197 PVNPLPD 203 >gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians] Length = 189 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 3/131 (2%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 G++ ++ + ++ + + L +V + + A A+S+ +L + RRA Sbjct: 8 KGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLAVRRACYG 67 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194 ++ M GA G +V+ SG+L G + +++ +G + + R ++D G Sbjct: 68 VLRFIMESGAKGCEVVVSGKLRG-QRAKSMKSTDGLMIHSGEPRRHYVDTAVRHVHLRQG 126 Query: 195 SCGIKVYVSLR 205 GIKV + L Sbjct: 127 VLGIKVKIMLP 137 >gi|288191245|gb|ADC43975.1| ribosomal protein S3 [Idesia polycarpa] Length = 478 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%) Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 L+ G LI+ II+ + R +++K+R LSN TN+ ++ Sbjct: 330 LRDKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIT 389 Query: 103 VNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLN 158 ++ +A+LIAQ I+ QL +R FR + V+ M +G+++ SGRL Sbjct: 390 SVKIKSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDLSFLMNKWVEGIRICCSGRLK 449 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTA 187 GAE++RTEC G+ IDY A Sbjct: 450 GAEIARTECGKYGKTSCNVFNQKIDYAPA 478 >gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus] Length = 181 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 6/159 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194 G + +++ +++G + + ++D G Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180 >gi|297841011|ref|XP_002888387.1| hypothetical protein ARALYDRAFT_475617 [Arabidopsis lyrata subsp. lyrata] gi|297334228|gb|EFH64646.1| hypothetical protein ARALYDRAFT_475617 [Arabidopsis lyrata subsp. lyrata] Length = 109 Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 3/107 (2%) Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVP 107 G+A+I I++ +II+Y P L+I K +++ +K N N ++++++ + Sbjct: 3 GIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRIS 62 Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 P + ++A+ IA QL+ RV FR+AMK+A++ + G++V + Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIA 109 >gi|312232681|gb|ADQ53669.1| ribosomal protein S3 [Croton coryi] Length = 276 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 160 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 219 Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194 M+ G +G+++ SGRL GAE++RT+C G+ IDY A T YG Sbjct: 220 IPLVMKKGVEGIRICCSGRLKGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 276 >gi|159481344|ref|XP_001698739.1| hypothetical protein CHLREDRAFT_18599 [Chlamydomonas reinhardtii] gi|158273450|gb|EDO99239.1| predicted protein [Chlamydomonas reinhardtii] Length = 1125 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 4/113 (3%) Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152 ++H +A A +A+ LE + R + + +A V+V Sbjct: 141 GQQVHFQPFVFNDIFQSAPAAATYVAEALESGSAWGRIERFFLAAAEADAGKLVAAVRVE 200 Query: 153 ASGRL-NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +GR+ A+++ T+ + G + L +L + +DYGTA A T G GIKV++ Sbjct: 201 VAGRIGRKADMAATKSWAWGDLRLASLTSKLDYGTAAANTRMGVLGIKVWIRY 253 >gi|213025796|ref|ZP_03340243.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 52 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 36/52 (69%), Positives = 41/52 (78%) Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 AVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+ Sbjct: 1 AVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSE 52 >gi|323398677|ref|YP_004222752.1| ribosomal protein S3 [Glaucocystis nostochinearum] gi|321401370|gb|ADW83124.1| ribosomal protein S3 [Glaucocystis nostochinearum] Length = 238 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 16/218 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA---RGSEYGALLHEDLKIREYLQCHLKQAGVAKILI 57 MG+KINPI+FR N TW W + EY A + I +YL+ + I Sbjct: 1 MGKKINPIIFRYNTNQTWQYIWHTPINKKHEYSAQFFINFFIDKYLKNIFINKNIVISKI 60 Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117 +I ++ + ++ + + K +I + Sbjct: 61 FLLSNWNKIKIFFYLFPYLNIINNKIEINFKQSFIKKIKKNTISILQKYLKKKIFLNIFT 120 Query: 118 Q------------SIAQQLER-RVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164 +++ ++++ + + K ++ G+K++ GRL + + Sbjct: 121 DKNCIINEDALISNLSFEIKKTKNIKNIIKKLFIKIKNYPQIIGLKILIKGRLTKNDQAT 180 Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 +G++P T++++I + T G+ GIK+++ Sbjct: 181 IIYLQKGKIPFNTIKSNILFAKNWIITRRGTYGIKIWI 218 >gi|307683362|dbj|BAJ19667.1| ribosomal protein S3 [Pseudolarix kaempferi] Length = 66 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 29/48 (60%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK 48 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ +++ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVR 48 >gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia] Length = 230 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 7/203 (3%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 + + + ++ +L L AG A ++ T I + +A + G +G + Sbjct: 10 KKKFVADGVFQ-AELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEGRKL 68 Query: 85 EKIRKKLSNMT---NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ + + L V V + A A+S+ +L +V R A ++ Sbjct: 69 RELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQI 128 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G + I SG+L G + +++ Y G + Q + ID G G+K Sbjct: 129 MADGAIGAECIISGKL-GQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVK 187 Query: 200 VYVSLRDEVSDSDSTIPAAEHRV 222 V + + S +V Sbjct: 188 VKIYRPYDPSGKKGIPIEVPDKV 210 >gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia] Length = 230 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 7/203 (3%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 + + + ++ +L L AG A ++ T I + +A + G +G + Sbjct: 10 KKKFVADGVFQ-AELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEGRKL 68 Query: 85 EKIRKKLSNMT---NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ + + L V V + A A+S+ +L +V R A ++ Sbjct: 69 RELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQI 128 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G + I SG+L G + +++ Y G + Q + ID G G+K Sbjct: 129 MADGAIGAECIISGKL-GQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVK 187 Query: 200 VYVSLRDEVSDSDSTIPAAEHRV 222 V + + S +V Sbjct: 188 VKIYRPYDPSGKKGIPIEVPDKV 210 >gi|307683365|dbj|BAJ19669.1| ribosomal protein S3 [Tsuga chinensis] Length = 63 Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 29/48 (60%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK 48 M QKINP+ FRLGV S WFA+ Y L ED KIR ++ +++ Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVR 48 >gi|302748581|gb|ADL63771.1| ribosomal protein S3 [Bistorta sp. Qiu 06003] Length = 460 Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN T + Sbjct: 306 KVMKLIEKFIDLGGIEEL-IKGIEMMIEIILKNRRIPYGYNFYLNEVKKMRSLLSNRTKT 364 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++ Sbjct: 365 NTLMESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFSKIVKDIPLGMKNGIEGIRICC 424 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G+ IDY A Sbjct: 425 SGRLAGAEIARTECGKYGKTSCNVFNKKIDYAAAEV 460 >gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta] gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta] Length = 218 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%) Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67 + +RL + + A G Y I E+L+ LK+ G + I I++ + II Sbjct: 2 LGYRLSLKKKFV----ADGVVYSE-------INEFLERELKENGFSGIKIKKKIEKVEII 50 Query: 68 VYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124 + S++ IIG KG I ++ KK N +++ L V ++ + A+S+ ++ Sbjct: 51 IKSSKAHTIIGFKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKI 110 Query: 125 ERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184 R V R+A ++S + GA G + SG+L A+ ++T +++G + + + + +Y Sbjct: 111 LRGFVLRKACYSILRSTIEAGAKGCIISVSGKLR-AQRAKTMKFMDGYI-IHSGKPSEEY 168 Query: 185 ---GTAVAETAYGSCGIKVYVSLR 205 G GIK+ + L Sbjct: 169 TKSAIRHCLLPQGVIGIKISIMLP 192 >gi|302748655|gb|ADL63808.1| ribosomal protein S3 [Claytonia virginica] Length = 449 Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 5/160 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T + Sbjct: 291 KVMKLIEKCIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSFLSNKTKT 349 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 +S ++ +A+ IAQ I Q + +R FR+ + VQ+ M+ G +G+++ Sbjct: 350 NTLISSKKIQSVYQSASPIAQDIYFQPKNKRRSFRKIFSKIVQNIPLVMKKGVEGIRISC 409 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 GRL GAE++RTEC G+ L ID A T Y Sbjct: 410 PGRLKGAEIARTECGKYGKTSCNVLYQKIDECFAEFSTRY 449 >gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus] Length = 201 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 6/158 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAY 193 G + +++ +++G + + ++D Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179 >gi|302748551|gb|ADL63756.1| ribosomal protein S3 [Aphloia theiformis] Length = 479 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 4/154 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADG--VKVIAS 154 + ++ +A+ IAQ I+ QL + FR + + G +++ S Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIAKDIPLVMKKGVGIRICCS 445 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188 GRL GAE++RTEC G+ IDY A Sbjct: 446 GRLKGAEIARTECGKYGKTSRSVFNQKIDYAPAE 479 >gi|302749001|gb|ADL63980.1| ribosomal protein S3 [Ruptiliocarpon caracolito] Length = 480 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 5/152 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 329 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 387 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 388 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSNIVKDIPLVMKKGVEGIRICC 447 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 SGR GAE++RTEC G+ IDY Sbjct: 448 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYA 479 >gi|152060885|sp|Q74MZ4|RS3_NANEQ RecName: Full=30S ribosomal protein S3P Length = 230 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+++ +L+ A V+K++I +T R+I+YSARP +I ++ + K+ + + I Sbjct: 21 EFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAKLLELKFGLEKPVIE 80 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + + P ++A +IA+ +A +ER + +RR +R +++ M GA G +++ +GRL+G Sbjct: 81 VLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGRLSG 138 Query: 160 AELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 + +T + G + +D +A G GI V + D + Sbjct: 139 -QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTILKPDAEIPDIIEFKS 197 Query: 218 A 218 Sbjct: 198 P 198 >gi|239811646|gb|ACS27133.1| ribosomal protein S3 [Heterosigma akashiwo] gi|239811686|gb|ACS27172.1| ribosomal protein S3 [Heterosigma akashiwo] Length = 312 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 29/191 (15%) Query: 27 SEY--GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY----SARPGLIIGKK 80 + +L +K+ L + + + ++I++ S L K Sbjct: 132 KNFLKANMLQ--IKVSSLLFFSFGKLESLAKALLNFTQVQKVIIHFKDLSQFVKLPNIKS 189 Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 + + L + N + A LIA + LE + +R+ + + + Sbjct: 190 SSGTFEDWVYLFTLMN-----------NTKPTAMLIANYLKLILENKS-YRKRQRFFLNN 237 Query: 141 ---------AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191 A+ G+K+ GRLNG S G +PLQTL IDY A T Sbjct: 238 LRRFLIQNPALLSKVKGIKIQVKGRLNGRNRSTIYTIQLGSLPLQTLSKEIDYTFVPAFT 297 Query: 192 AYGSCGIKVYV 202 YG+ GIKV++ Sbjct: 298 LYGAFGIKVWI 308 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 13/79 (16%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ RLG TW S+WF++ S + L + K LI+ Sbjct: 1 MGQKAHPLSSRLGKFLTWESQWFSKNSRVASHLI-------------FKNYTLKTLIQSF 47 Query: 61 HKNCRIIVYSARPGLIIGK 79 N +I+++S Sbjct: 48 FFNNKILIHSFESRYFNNN 66 >gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M] gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M] Length = 236 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+++ +L+ A V+K++I +T R+I+YSARP +I ++ + K+ + + I Sbjct: 27 EFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAKLLELKFGLEKPVIE 86 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + + P ++A +IA+ +A +ER + +RR +R +++ M GA G +++ +GRL+G Sbjct: 87 VLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGRLSG 144 Query: 160 AELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 + +T + G + +D +A G GI V + D + Sbjct: 145 -QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTILKPDAEIPDIIEFKS 203 Query: 218 A 218 Sbjct: 204 P 204 >gi|288871942|dbj|BAI70628.1| ribosomal protein S3 [Heterosigma akashiwo] Length = 312 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 29/191 (15%) Query: 27 SEY--GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY----SARPGLIIGKK 80 + +L +K+ L + + + ++I++ S L K Sbjct: 132 KNFLKANMLQ--IKVSSLLFFSFGKLESLAKALLNFTQVQKVIIHFKDLSQFVKLPNIKS 189 Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 + + L + N + A LIA + LE + +R+ + + + Sbjct: 190 SSGTFEDWVYLFTLMN-----------NTKPTAMLIANYLKLILENKS-YRKRQRFFLNN 237 Query: 141 ---------AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191 A+ G+K+ GRLNG S G +PLQTL IDY A T Sbjct: 238 LRRFLIQNPALLSKVKGIKIQVKGRLNGRNRSTIYTIQLGSLPLQTLSKEIDYTFVPAFT 297 Query: 192 AYGSCGIKVYV 202 YG+ GIKV++ Sbjct: 298 LYGAFGIKVWI 308 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 13/79 (16%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MGQK +P+ RLG TW S+WF++ S + L + K LI+ Sbjct: 1 MGQKAHPLSSRLGKFLTWESQWFSKNSRVASHLI-------------FKNYTLKTLIQSF 47 Query: 61 HKNCRIIVYSARPGLIIGK 79 N +I+++S Sbjct: 48 FFNNKILIHSFESRYFNNN 66 >gi|302748945|gb|ADL63952.1| ribosomal protein S3 [Peumus boldus] Length = 471 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 9/154 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E + + G+ + I + + G +++KIR LSN T Sbjct: 320 KVMELIDKFIDLGGIGE---WIKGIEMMIEIILRNSRIPYGYNSYLNEVQKIRSLLSNRT 376 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ Q + FR + VQ M G +G+++ Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVQDIKLVMPKGVEGIRI 436 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 SGR GAE++RTEC G+ IDY Sbjct: 437 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYA 470 >gi|312232773|gb|ADQ53715.1| ribosomal protein S3 [Croton monanthogynus] Length = 409 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 12/164 (7%) Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89 K+ E ++ + + ++ +I+ + +I + R +++K+R Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFIEMKKMRS 304 Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145 LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364 Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 +G+++ SGRL GAE++RTEC G+ IDY A Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 408 >gi|302851104|ref|XP_002957077.1| hypothetical protein VOLCADRAFT_107510 [Volvox carteri f. nagariensis] gi|300257633|gb|EFJ41879.1| hypothetical protein VOLCADRAFT_107510 [Volvox carteri f. nagariensis] Length = 968 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152 +H +A+ A +A LE + R AV++ GV+V Sbjct: 121 GQNVHFQPFVFSNIFQSASAAATYVAAALEGGANWGRVERFFLAAVEAEDNNIVRGVRVA 180 Query: 153 ASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 SGR+ A+++ T+ + G + L+ L +DYG A A T G+ G+KV++ + Sbjct: 181 VSGRMGLKADMAATKVWEWGEMSLRALSDRLDYGIATANTRLGTLGVKVWIRYK 234 >gi|3642663|gb|AAC36521.1| ribosomal protein S3 [Mus musculus] Length = 123 Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141 ++ + +K + L +V + A A+S+ +L + RRA ++ Sbjct: 2 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 61 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +V+ SG+L G + +++ +++G + + ++D G GIK Sbjct: 62 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120 Query: 200 VYV 202 V + Sbjct: 121 VKI 123 >gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens] Length = 158 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%) Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 + +++ +++G + + ++D G GIKV + L ++ Sbjct: 60 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 119 >gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis] Length = 165 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%) Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 + +V + AT A+S+ +L + RRA ++ M GA G +V+ SG+L G Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 + +++ +++G + ++D T G GIKV + L ++ Sbjct: 60 QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 119 >gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus] Length = 158 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 8/123 (6%) Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + + Sbjct: 5 EKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRG-QRA 63 Query: 164 RTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221 ++ +++G + ++D T G GIKV + D T R Sbjct: 64 KSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPTGKTGPKR 118 Query: 222 VVE 224 + Sbjct: 119 PLP 121 >gi|302749011|gb|ADL63985.1| ribosomal protein S3 [Sarcobatus vermiculatus] Length = 458 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 5/153 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+ Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAM---RFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + +R FR + V++ + G +G+++ Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRGIFSKIVKNIPLVIQKGIEGIRICC 425 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186 SGRL GAE++RTEC G+ L IDY + Sbjct: 426 SGRLEGAEIARTECGKYGKTSCNVLYQKIDYAS 458 >gi|118724957|gb|ABL11072.1| ribosomal protein S3 [Codium taylorii] gi|118724960|gb|ABL11074.1| ribosomal protein S3 [Codium taylorii] gi|118724963|gb|ABL11076.1| ribosomal protein S3 [Codium taylorii] gi|118724966|gb|ABL11078.1| ribosomal protein S3 [Codium taylorii] Length = 44 Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPL TL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLHTLSANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|302748605|gb|ADL63783.1| ribosomal protein S3 [Calceolaria integrifolia] Length = 476 Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG--TDIEKIRKKLSNMTNSE 98 + ++ K + +I I + + G +++KIR LSN TN+ Sbjct: 325 KVIELIEKFIDLGRIGEFLKGIEMMIEIILRNRRIRYGYNSYFHEVKKIRSLLSNRTNTN 384 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154 + ++ +A+ IAQ I+ QL ++ FR ++ V++ M+ G G+++ S Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFQLRTKKRSFRSIFRKIVKNIPLVMKKGVGGIRICCS 444 Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 GR GA+++RTEC G++ IDY Sbjct: 445 GRSKGAKIARTECGKYGKISRNVFNQKIDYA 475 >gi|118724912|gb|ABL11042.1| ribosomal protein S3 [Codium papenfussii] Length = 56 Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 31/45 (68%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RTE EG+VPLQ+L A+IDY A+T YG GIK+++ ++ Sbjct: 1 ARTEWVREGQVPLQSLSANIDYCFRTAKTIYGILGIKIWICQKNV 45 >gi|118724834|gb|ABL10990.1| ribosomal protein S3 [Codium geppiorum] Length = 44 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY + A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFSTAKTIYGILGIKIWIFQK 43 >gi|118724723|gb|ABL10916.1| ribosomal protein S3 [Codium bursa] gi|118724726|gb|ABL10918.1| ribosomal protein S3 [Codium bursa] Length = 44 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ L A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQNLSANIDYAFRTAKTIYGILGIKIWIFQK 43 >gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii] Length = 250 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%) Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L G Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 129 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 + +++ +++G + + ++D G GIKV + L ++ Sbjct: 130 QRAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKVKIMLPWDPTGKIGPKKPL 189 >gi|118724909|gb|ABL11040.1| ribosomal protein S3 [Codium ovale] gi|118724924|gb|ABL11050.1| ribosomal protein S3 [Codium repens] gi|118724927|gb|ABL11052.1| ribosomal protein S3 [Codium repens] gi|118724954|gb|ABL11070.1| ribosomal protein S3 [Codium subtubulosum] gi|118724984|gb|ABL11090.1| ribosomal protein S3 [Codium sp. DML30930] gi|118724993|gb|ABL11096.1| ribosomal protein S3 [Codium sp. DML30929] Length = 44 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPL TL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLHTLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|1086195|pir||S51054 ribosomal protein S3 - Thermus aquaticus (fragments) Length = 36 Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 19/35 (54%), Positives = 23/35 (65%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHED 36 G KI+PI FRLG+ W SRW+A +Y LL ED Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYXHLLLED 35 >gi|118724918|gb|ABL11046.1| ribosomal protein S3 [Codium platylobium] gi|118724999|gb|ABL11100.1| ribosomal protein S3 [Codium sp. HV1061] gi|118725002|gb|ABL11102.1| ribosomal protein S3 [Codium sp. HV1068] Length = 44 Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|288191269|gb|ADC43987.1| ribosomal protein S3 [Sloanea berteroana] Length = 489 Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 5/154 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 337 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 395 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ Sbjct: 396 NTLIESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSKIVKYIPLVMKKGVEGIRICC 455 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 SGR GAE++RT+C G+ P IDY A Sbjct: 456 SGRSKGAEIARTQCGKYGKTPRNVFNQKIDYAPA 489 >gi|118724996|gb|ABL11098.1| ribosomal protein S3 [Codium sp. DML66031] Length = 56 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 30/45 (66%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RTE +GRVPLQ+L A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVRKGRVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQPNV 45 >gi|223927296|gb|ACN23261.1| ribosomal protein S3 [Halimeda heteromorpha] Length = 218 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 23/179 (12%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYSARPGLI 76 S+W+A Y L ED +R L +AG I I R + I++ + +P ++ Sbjct: 1 HLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRKIENHIEIVIRAQKPEIL 60 Query: 77 IGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-----------IAQSIAQQ 123 IGKKG +++ +K++ + ++ S N KP++ L IA + + Sbjct: 61 IGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHVIRCQTGASSIADFLVEN 120 Query: 124 LERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 LE+R+ ++ K+ + + A+R A + + +S L + S E G V Sbjct: 121 LEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGLGASGGSVFEQDRTGSV 179 >gi|224999234|gb|ACN78389.1| ribosomal protein S3 [Codium fragile] Length = 46 Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 31/45 (68%) Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +++RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 DIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 45 >gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus] Length = 157 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QR 59 Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 +++ +++G + ++D T G GIKV + L ++ Sbjct: 60 AKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 117 >gi|224044177|ref|XP_002189345.1| PREDICTED: putative ribosomal protein S3, partial [Taeniopygia guttata] Length = 152 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ +++ Sbjct: 5 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVD 63 Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 G + + ++D G GIKV + L ++ Sbjct: 64 GLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 113 >gi|302748717|gb|ADL63839.1| ribosomal protein S3 [Drosophyllum lusitanicum] Length = 459 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ + ++ + + +I I + + G +++K+R LSN T Sbjct: 304 KVMKLIEKFID---LGRIRELIKGIEMMIEIILKNRIIPYGYNSYLNEVKKMRSLLSNRT 360 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKV 151 N+ + ++ +A+ IAQ I+ Q + + FR + V+ G+++ Sbjct: 361 NTNTLIESVKIQSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKEVEGIRI 420 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGRL GAE++RTEC G+ IDY +A Sbjct: 421 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYASAEV 458 >gi|118724915|gb|ABL11044.1| ribosomal protein S3 [Codium platyclados] Length = 44 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTCRTAKTIYGILGIKIWIFQK 43 >gi|118724762|gb|ABL10942.1| ribosomal protein S3 [Codium decorticatum] Length = 56 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/45 (44%), Positives = 30/45 (66%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQPNV 45 >gi|118724816|gb|ABL10978.1| ribosomal protein S3 [Codium galeatum] Length = 43 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQP 43 >gi|302748915|gb|ADL63937.1| ribosomal protein S3 [Olinia emarginata] Length = 478 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T + Sbjct: 323 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRKIPDGYNFYLNEVQKMRSLLSNRTKT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 ++ ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++ Sbjct: 382 NTNIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGR GAE++RT+C G+ IDY A Sbjct: 442 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEV 477 >gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3] gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3] Length = 216 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 6/169 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NS 97 E L L + G + +T II+ +A + G ++++R + Sbjct: 24 ELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWRLKED 83 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + + ++ + + ++A +S+ +L R+ RRA ++ M GA G +V SG+L Sbjct: 84 SLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKL 143 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 GA + T Y EG + + + + GI+V + L Sbjct: 144 RGA-RASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIML 191 >gi|118724828|gb|ABL10986.1| ribosomal protein S3 [Codium geppiorum] gi|118724858|gb|ABL11006.1| ribosomal protein S3 [Codium isthmocladum] gi|118724864|gb|ABL11010.1| ribosomal protein S3 [Codium isthmocladum] gi|118724867|gb|ABL11012.1| ribosomal protein S3 [Codium isthmocladum subsp. clavatum] gi|118724870|gb|ABL11014.1| ribosomal protein S3 [Codium laminarioides] gi|118724921|gb|ABL11048.1| ribosomal protein S3 [Codium prostratum] gi|118724936|gb|ABL11058.1| ribosomal protein S3 [Codium spinescens] gi|118724972|gb|ABL11082.1| ribosomal protein S3 [Codium vermilara] gi|118724975|gb|ABL11084.1| ribosomal protein S3 [Codium vermilara] gi|118724990|gb|ABL11094.1| ribosomal protein S3 [Codium sp. DML65827] gi|118725011|gb|ABL11108.1| ribosomal protein S3 [Codium sp. DHO-007] gi|118725014|gb|ABL11110.1| ribosomal protein S3 [Codium sp. DHO2-196] Length = 44 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|154284746|ref|XP_001543168.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1] gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1] Length = 239 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 11/152 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E+ Q L + G + + + T II+ + ++G++G Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ +K + + L +V ++A +S+ +L + RRA ++ Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGR 172 M GA G +V+ SG+L A +++ + Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTSKS 159 >gi|322816232|gb|EFZ24615.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] Length = 139 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 3/137 (2%) Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 + ++ L V ++A A+S+ +L + RRA ++ M GA G +V Sbjct: 1 FHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEV 60 Query: 152 IASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 G++ G + +++ + +G + + +D T G+ G+KV + L + Sbjct: 61 TVGGKIKG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQ 119 Query: 210 DSDSTIPAAEHRVVEKD 226 + + +P + K+ Sbjct: 120 NEEEILPDVITVLEPKE 136 >gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 244 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 17/169 (10%) Query: 67 IVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 ++ ++G+KG I ++ ++ + + + L V + A A+S+ + Sbjct: 39 NLHDYGIRKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYK 98 Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH-- 181 L + RRA ++ M GA GV+V SG+L A+ ++ + +G + L T Sbjct: 99 LLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEM 156 Query: 182 -IDYGTAVAETAYGSCGIKVYVSL---------RDEVSDSDSTIPAAEH 220 +D + G GI+V + + D TI + Sbjct: 157 YVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 205 >gi|118724813|gb|ABL10976.1| ribosomal protein S3 [Codium cf. fragile AU5] Length = 44 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTCRTAKTIYGILGIKIWIFQK 43 >gi|322820571|gb|EFZ27150.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] Length = 130 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 3/128 (2%) Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 L V ++A A+S+ +L + RRA ++ M GA G +V G++ G Sbjct: 1 LFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKIKG- 59 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 + +++ + +G + + +D T G+ G+KV + L + + + +P Sbjct: 60 QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQNEEEILPDV 119 Query: 219 EHRVVEKD 226 + K+ Sbjct: 120 ITVLEPKE 127 >gi|118724987|gb|ABL11092.1| ribosomal protein S3 [Codium sp. DML40218] Length = 44 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFKTAKTIYGILGIKIWIFQK 43 >gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3 [Drosophila yakuba] Length = 172 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + + ++G+KG I ++ + N Sbjct: 25 EFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144 Query: 158 NGAELSRTECYLEGRV 173 G + +++ +++G + Sbjct: 145 RG-QRAKSMKFVDGLM 159 >gi|312232833|gb|ADQ53745.1| ribosomal protein S3 [Croton trinitatis] Length = 452 Score = 70.0 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA 141 +++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ Sbjct: 341 EMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDI 400 Query: 142 ---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 M+ G +G+++ SGRL GAE++RTEC G+ IDY A Sbjct: 401 PLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 451 >gi|118724795|gb|ABL10964.1| ribosomal protein S3 [Codium fragile] gi|118724798|gb|ABL10966.1| ribosomal protein S3 [Codium fragile] gi|118724804|gb|ABL10970.1| ribosomal protein S3 [Codium fragile] gi|224999241|gb|ACN78393.1| ribosomal protein S3 [Codium fragile] gi|224999244|gb|ACN78395.1| ribosomal protein S3 [Codium fragile] gi|224999247|gb|ACN78397.1| ribosomal protein S3 [Codium fragile] gi|224999250|gb|ACN78399.1| ribosomal protein S3 [Codium fragile] gi|224999255|gb|ACN78402.1| ribosomal protein S3 [Codium fragile] gi|224999258|gb|ACN78404.1| ribosomal protein S3 [Codium fragile] gi|224999261|gb|ACN78406.1| ribosomal protein S3 [Codium fragile] gi|255529406|gb|ACU12644.1| ribosomal protein S3 [Codium fragile] gi|255529412|gb|ACU12648.1| ribosomal protein S3 [Codium fragile] Length = 44 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 43 >gi|118725017|gb|ABL11112.1| ribosomal protein S3 [Codium sp. DML65829] Length = 44 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVRQGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFHK 43 >gi|224999238|gb|ACN78391.1| ribosomal protein S3 [Codium fragile] gi|255529403|gb|ACU12642.1| ribosomal protein S3 [Codium fragile] Length = 45 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 30/44 (68%) Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 IARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 44 >gi|118724969|gb|ABL11080.1| ribosomal protein S3 [Codium cf. tenue HV608] Length = 44 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|118724792|gb|ABL10962.1| ribosomal protein S3 [Codium cf. flabellatum DHO-009] gi|118724822|gb|ABL10982.1| ribosomal protein S3 [Codium geppiorum] gi|118724879|gb|ABL11020.1| ribosomal protein S3 [Codium cf. latum ASH-018] Length = 44 Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43 >gi|118724780|gb|ABL10954.1| ribosomal protein S3 [Codium duthieae] Length = 53 Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 29/41 (70%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWLRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41 >gi|118724837|gb|ABL10992.1| ribosomal protein S3 [Codium gracile] Length = 44 Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQSLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|288191255|gb|ADC43980.1| ribosomal protein S3 [Fusispermum laxiflorum] Length = 157 Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ L + ++ I + + G +++K+R LSN T Sbjct: 2 KVMELIEKFLNLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEMKKMRSLLSNKT 58 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151 N+ + ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++ Sbjct: 59 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRI 118 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 SGR GAE++RT+C G+ IDY A Sbjct: 119 CCSGRSKGAEIARTKCGKSGKPSRNVFNQKIDYAPAEV 156 >gi|118724900|gb|ABL11034.1| ribosomal protein S3 [Codium cf. minus DHO-015] gi|118724903|gb|ABL11036.1| ribosomal protein S3 [Codium cf. minus DHO2-188] Length = 44 Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWIREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43 >gi|118724777|gb|ABL10952.1| ribosomal protein S3 [Codium duthieae] Length = 56 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 29/41 (70%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41 >gi|302749059|gb|ADL64009.1| ribosomal protein S3 [Strasburgeria robusta] Length = 453 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ + I + + G +++K+R LSN T Sbjct: 305 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 361 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ Sbjct: 362 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 421 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHID 183 SGR GAE++RTEC G+ ID Sbjct: 422 CCSGRSEGAEIARTECGKYGKTSRNVFNQKID 453 >gi|118724981|gb|ABL11088.1| ribosomal protein S3 [Codium sp. DML40227] Length = 44 Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWIRQGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|118724774|gb|ABL10950.1| ribosomal protein S3 [Codium duthieae] Length = 56 Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 29/41 (70%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41 >gi|118724906|gb|ABL11038.1| ribosomal protein S3 [Codium muelleri] Length = 44 Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRIAKTIYGILGIKIWIFQK 43 >gi|289065184|ref|YP_003434236.1| ribosomal protein S3 [Chattonella marina] gi|288871896|dbj|BAI70583.1| ribosomal protein S3 [Chattonella marina] Length = 315 Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%) Query: 106 VPKPEINATLIAQSIAQQLERRVVFRR------AMKRAV--QSAMRFGADGVKVIASGRL 157 + K + +A LI + LE++ + +R +++R + + G+K+ +GR+ Sbjct: 206 IKKQKPSALLIGNYVKYLLEKKGMKKRQRFVLNSLRRFLIQNQKILTNLKGLKIQVNGRI 265 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 NG S T G VPLQT IDY T G GIKV+V Sbjct: 266 NGRNRSTTYVIQLGCVPLQTFSKKIDYTFLPCFTLDGVFGIKVWV 310 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS 27 MGQK +P+ RLG+ W S WF Sbjct: 1 MGQKAHPVGTRLGILSNWESEWFTTNK 27 >gi|13310850|gb|AAK18642.1|AF250389_8 ribosomal protein S3 [Candidatus Carsonella ruddii] Length = 150 Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+KINPI FRLG ++S W+ + + L +D+ +RE ++ + I I Sbjct: 1 MGKKINPIFFRLGKKTNYHSLWYCKKKNFSFFLKKDILLREIIKKFFFFIDLNNIDI-IF 59 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105 I +Y I+ + ++ + ++ + I ++ Sbjct: 60 ANKIIINLYLNNFENILSIENY-LDLLILEIYKIFKKNILFNLIN 103 >gi|297815302|ref|XP_002875534.1| hypothetical protein ARALYDRAFT_905288 [Arabidopsis lyrata subsp. lyrata] gi|297321372|gb|EFH51793.1| hypothetical protein ARALYDRAFT_905288 [Arabidopsis lyrata subsp. lyrata] Length = 79 Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 49/79 (62%) Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145 +K N N ++++++ + P + ++A+ IA QL+ RV FR+AMK+A++ + Sbjct: 1 MNVQKELNCVNRKLNIAITRISNPYGDPNILAEFIAGQLKDRVSFRKAMKKAIELTEQAN 60 Query: 146 ADGVKVIASGRLNGAELSR 164 G++V +GR++G E++R Sbjct: 61 TKGIQVQIAGRIDGKEIAR 79 >gi|255529400|gb|ACU12640.1| ribosomal protein S3 [Codium fragile] Length = 42 Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 27/41 (65%) Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 TE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 TEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 41 >gi|239786350|gb|ACS16410.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786352|gb|ACS16411.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786354|gb|ACS16412.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786356|gb|ACS16413.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786358|gb|ACS16414.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786360|gb|ACS16415.1| ribosomal protein S3 [Chlamydomonas reinhardtii] gi|239786362|gb|ACS16416.1| ribosomal protein S3 [Chlamydomonas reinhardtii] Length = 41 Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 20/37 (54%), Positives = 24/37 (64%) Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GRVPLQTLRA+IDY A T YG G+KV++ Sbjct: 1 RAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 37 >gi|255529382|gb|ACU12628.1| ribosomal protein S3 [Codium fragile] gi|255529388|gb|ACU12632.1| ribosomal protein S3 [Codium fragile] gi|255529420|gb|ACU12653.1| ribosomal protein S3 [Codium fragile] Length = 43 Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 28/42 (66%) Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 RTE +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 RTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 42 >gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 193 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ ++ + + + L V + A A+S+ +L + RRA ++ Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 M GA GV+V SG+L A+ ++ + +G + Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL 162 >gi|118724765|gb|ABL10944.1| ribosomal protein S3 [Codium dimorphum] Length = 44 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQSLAANIDYSFQIAKTIYGILGIKIWIFQK 43 >gi|118724783|gb|ABL10956.1| ribosomal protein S3 [Codium effusum] gi|118724786|gb|ABL10958.1| ribosomal protein S3 [Codium effusum] gi|118724789|gb|ABL10960.1| ribosomal protein S3 [Codium effusum] Length = 44 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 22/42 (52%), Positives = 31/42 (73%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +RTE EG+VPLQTL A+IDY + +A+T YG GIK+++ Sbjct: 1 ARTEWVQEGQVPLQTLAANIDYTSQIAKTIYGILGIKIWIFH 42 >gi|118724825|gb|ABL10984.1| ribosomal protein S3 [Codium geppiorum] Length = 44 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQTL A+IDY A+T YG GIK+++ Sbjct: 1 ARTEWVRKGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQN 43 >gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus] Length = 177 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 3/127 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NGAELSR 164 G + Sbjct: 143 RGQRANH 149 >gi|11496539|ref|NP_044549.1| ribosomal protein S3 [Toxoplasma gondii RH] gi|5231242|gb|AAD41136.1|U87145_5 ribosomal protein S3 [Toxoplasma gondii] Length = 224 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 63/145 (43%), Gaps = 9/145 (6%) Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122 +I + I KK ++ +++K I+++ + P + T + + + Sbjct: 85 KLKIFIKEINNIKRIYKKIDNLNNLKQKYY------IYINFLILKNPFSSITYLFYYVIK 138 Query: 123 QLERRVVFRRAMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 + ++ + R+ +K+ + + + G+K++ SG++NG +++ E G Sbjct: 139 KFKQTLSLRKILKQLSLLILNIKKTSIKGIKILVSGKINGVVIAKKETCNYGLNYFNKYV 198 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 +I Y +T +G G K ++ L Sbjct: 199 YNIKYNVFYLKTKFGVLGFKFWIFL 223 >gi|118725008|gb|ABL11106.1| ribosomal protein S3 [Codium sp. DHO2-348] Length = 44 Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY A+T YG GIK+++ + Sbjct: 1 ARTERVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43 >gi|49147206|ref|YP_025799.1| ribosomal protein S3 [Pseudendoclonium akinetum] gi|33439221|gb|AAQ18758.1| ribosomal protein S3 [Pseudendoclonium akinetum] Length = 525 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 141 AMRFGADGVKVIASGRLNGAE-LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199 + + G+++ SGRL G + +++T GRVPL TLR +D+ V +T GS G+K Sbjct: 460 VIPYLIKGLRITFSGRLGGKKGMAKTLTKTTGRVPLSTLREKVDFAKGVVQTKMGSLGVK 519 Query: 200 VYVSLR 205 V++ Sbjct: 520 VWICFN 525 >gi|288191170|gb|ADC43938.1| ribosomal protein S3 [Euphronia guianensis] Length = 211 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRA 137 ++K+R LSN TN+ + ++ +A+ IAQ I+ QL +R FR +++ Sbjct: 99 NKMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIYSQIRKD 158 Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 + M+ G +G+++ SGR GAE++RT C G+ +DY A Sbjct: 159 IPLVMKKGVEGIRICCSGRSEGAEIARTLCGKYGKTSRNVFNQKMDYAPAEV 210 >gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 184 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140 I ++ ++ + + + L V + A A+S+ +L + RRA ++ Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 M GA GV+V SG+L A+ ++ + +G + Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL 162 >gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus] Length = 168 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NG 159 G Sbjct: 143 RG 144 >gi|13310859|gb|AAK18650.1|AF250390_8 ribosomal protein S3 [Candidatus Carsonella ruddii] Length = 148 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 MG+KINP+LFRL N ++S W+ +Y L D+ IRE ++ + ++ I I + Sbjct: 1 MGKKINPVLFRLKKNSVYHSLWYNIKKKYFYYLKCDILIREIIRKNFLFINLSYIDIIIS 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 I +Y L+ + ++ ++S + I L+ V +NA IA ++ Sbjct: 61 -NKLIINLYINNVDLLNDIENY-LDIFIFQISKILKKNIILNF--VFNYVLNAKNIAINV 116 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154 Q+ + ++ +K+ + + G K+ S Sbjct: 117 VNQILNKNSIKKIIKKEIFN--NRKNLGCKIQIS 148 >gi|118724753|gb|ABL10936.1| ribosomal protein S3 [Codium cranwelliae] Length = 44 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ + Sbjct: 1 ARTEWVRKGQVPLQSLEANIDYSFQTAKTIYGILGIKIWIFQK 43 >gi|118724945|gb|ABL11064.1| ribosomal protein S3 [Codium spongiosum] Length = 44 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQSLTANIDYTFQIAKTIYGILGIKIWIFQK 43 >gi|8954386|ref|NP_059375.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae] gi|4115799|dbj|BAA36537.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D] Length = 282 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 51/152 (33%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M KI P +RLG W + W+ Y L ++LKI EYL L + + + Sbjct: 1 MSHKIRPENYRLGYLFDWKNDWYTHNINYSNFLIKNLKISEYLNRILYKNFLFLGDLTLK 60 Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120 ++++ K T+ + I + ++ + I + Sbjct: 61 SNALKVLISLTCYPCKDSYKNTNWDLINHLCQLYFQKSVQINYYYRHTLLEHPNFITNWL 120 Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVI 152 LE+ + + + + + ++ Sbjct: 121 CFLLEKEYDLKIILNQVKNFIKKTQENEYQIN 152 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 10/154 (6%) Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS-- 119 I+ + I K + N E + E + N + + + Sbjct: 129 DLKIILNQVKNFIKKTQENEYQINKKTQNFIRSKNFETTKKLIETKNFQANTSYRSSNSL 188 Query: 120 ---IAQQLERRVVFRRAMKRAVQSAMRFGA---DGVKVIASGRLNG--AELSRTECYLEG 171 + + + G+K+I GRL+G ++S E G Sbjct: 189 HSSTRSETYSGNYYCSHCINSYDRFFSTKIVLLRGLKIIIRGRLHGLQNQISTVESIEIG 248 Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 VPLQT I Y T T YG GI+V++ Sbjct: 249 TVPLQTKEHEILYSTRDFVTKYGVYGIQVWIFYN 282 >gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum] gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum] Length = 138 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 8/116 (6%) Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170 ++A A+S+ +L + R+A ++ M GA G +VI SG++ G + ++ + + Sbjct: 6 LSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKG-QRAKAMKFCD 64 Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 G + + ++D + G GIKV + D DS+ + + Sbjct: 65 GLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSGKKGPRKPLP 115 >gi|118724888|gb|ABL11026.1| ribosomal protein S3 [Codium lucasii subsp. capense] Length = 44 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 32/43 (74%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY + +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQTLAANIDYTSQIAKTIYGILGIKIWIFQK 43 >gi|118724882|gb|ABL11022.1| ribosomal protein S3 [Codium lucasii] Length = 44 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQSLSANIDYTFQIAKTIYGILGIKIWIFQK 43 >gi|118724732|gb|ABL10922.1| ribosomal protein S3 [Codium capitatum] Length = 44 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQTL A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWLRKGKVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43 >gi|290559289|gb|EFD92626.1| KH type 2 domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 223 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 12/205 (5%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 ++E+ REYL + G++ I IE+T +II+ + +PG II + + Sbjct: 3 SKKIITDKVNEESA-REYLFKKFNRFGISDIKIEKTPLGMKIIIKTPKPGAIITRANQIL 61 Query: 85 EKIRKKLSNMTNSEIHLSVNEVP-KPEINATLIAQSIAQQLERR--VVFRRAMKRAVQSA 141 + K L E E P ++ +IA SIA ++ + + ++ + +A+ S Sbjct: 62 RESSKDLGEFFKQESPRIEVENSLDPNLDPAIIADSIAFKIAKFGPMKYKVVIHKAMDSI 121 Query: 142 MRFGADGVKVIASGRLNGAELSRTECYL-EGRVPLQTLRAHIDYGTAVAE----TAYGSC 196 M GA GV++ G + E + + G V +T + +G A+ GS Sbjct: 122 MAAGAKGVEIEIGGVIK--ERAAHFKFRPIGSVMPKTGQVEF-FGVRTAKKQLVLKRGSI 178 Query: 197 GIKVYVSLRDEVSDSDSTIPAAEHR 221 GIKV + + E E Sbjct: 179 GIKVTIVVPTETVGGIKINGGRESE 203 >gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus] Length = 147 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142 Query: 158 NG 159 G Sbjct: 143 RG 144 >gi|223927799|gb|ACN23520.1| ribosomal protein S3 [Halimeda discoidea] Length = 149 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 11/149 (7%) Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNC-RIIVYSARPGLI 76 S W+A +Y + ED + L +A I I R + I++++ +P ++ Sbjct: 1 HLSHWYASKKDYSKYVLEDNFVXTLLSKKXNRARFEXIQISRKIZXHXEIVIHAQKPDIL 60 Query: 77 IGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128 IG+KG +E +K+J NS++ + + ++ IA I LE R+ Sbjct: 61 IGRKGEXLEIFQKQJXTFIFQYRQIEWNSKLXVILYIFRXKTSASSAIADFIVXHLEXRI 120 Query: 129 VFRRAM--KRAVQSAMRFGADGVKVIASG 155 ++ + + G+K+ SG Sbjct: 121 PYKVVFTLLQKHLKXKKXSTLGMKIQISG 149 >gi|288191227|gb|ADC43966.1| ribosomal protein S3 [Podostemum ceratophyllum] Length = 390 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 5/153 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 +Y+ K+ + + + I+K+R LSN TN+ I Sbjct: 238 KYIFIDQFVFLGGKVEFIKKAIEMMKKIILKK-SYRYNLYLFSIKKMRSLLSNRTNTNIF 296 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIASGR 156 + ++ +A+ IAQ I+ +L+ + FR + + + S M+ G G+++ SGR Sbjct: 297 IFSVKMKSVFQSASTIAQDISLKLKNKNRSFRSIYTKIVKDISSVMKKGIGGIRICCSGR 356 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 G +++RTEC G+ IDY TA Sbjct: 357 SKGKKIARTECGNYGKTSRNVFNQKIDYATAEV 389 >gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera] Length = 252 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E L L + G + + + T II+ + R ++GKK + + + Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGKKDQGADFQWFRRGLNFLKTVW 82 Query: 101 LSVNE----------VPKPEINATL-----------IAQSIAQQLERRVVFRRAMKRAVQ 139 + + + + + I + + F A ++ Sbjct: 83 SFMLRKLTIGASVPLLRQSHCDTSFLEDLPFGGKPEIGHYYCH-IRSYLKFSLACYGVLR 141 Query: 140 SAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCG 197 M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G G Sbjct: 142 FVMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLG 200 Query: 198 IKVYVSL 204 IKV + L Sbjct: 201 IKVKIML 207 >gi|313768542|ref|YP_004062216.1| ribosomal protein S3 [Plocamiocolax pulvinata] gi|312844669|gb|ADR03232.1| ribosomal protein S3 [Plocamiocolax pulvinata] Length = 235 Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 78/231 (33%), Gaps = 30/231 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWF------ARGSEYGALLHE--DLKIREYLQCHLKQAGV 52 M +KINPI RLG+ WN F + Y +LH+ LK+ L + + Sbjct: 1 MAKKINPISLRLGIIQVWN---FLLQNYDREFNNYAIILHKYLQLKLFLKLFFSKYKFFI 57 Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 + + H + +Y ++ KK + + Sbjct: 58 SHMDFWCYHHFIFLNIYYTNIDFLVKKKFIKYLLNIVNIIKKKFLLKIKIRLYYKIEYFS 117 Query: 113 A-TLIAQSIAQQLERRVVFRRA----MKRAVQSAMRFGA------------DGVKVIASG 155 LI+ LE+ F + M+ ++ + G K+ G Sbjct: 118 TVHLISNYFCYLLEKNFSFSKILWVLMRFLEKNLNTYKIMYSKNGPIKMVLKGFKIKLVG 177 Query: 156 RLNGAE--LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 R ++++ Y G + L +L+ +++ T G CG+ +++ Sbjct: 178 RFKNTRNPMAKSVEYNVGSLSLISLKNQVEFSKTEVMTKLGVCGLHIWLFY 228 >gi|118724747|gb|ABL10932.1| ribosomal protein S3 [Codium convolutum] gi|118724891|gb|ABL11028.1| ribosomal protein S3 [Codium lucasii subsp. capense] Length = 44 Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTFQIAKTIYGILGIKIWIFQK 43 >gi|118724729|gb|ABL10920.1| ribosomal protein S3 [Codium cf. bursa DHO2-176] Length = 44 Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 31/43 (72%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTERIREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43 >gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB] Length = 136 Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQT 177 + +L + RRA V+ M GA G +V+ SG+L A ++ + +G + Q Sbjct: 1 MKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQP 59 Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSL 204 + ID T G GIKV + Sbjct: 60 VNDFIDTATRHVLMRQGVLGIKVKIMR 86 >gi|223927300|gb|ACN23263.1| ribosomal protein S3 [Halimeda borneensis] Length = 204 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 19/143 (13%) Query: 21 RWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYSARPGLIIGK 79 +W+A Y + ED +R L +AG KI I R + I++ + +P ++IGK Sbjct: 1 QWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRKIEDHIEIVIRAQKPEILIGK 60 Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---------------IAQSIAQQL 124 KG ++ +K++ + S N+ + L IA + + L Sbjct: 61 KGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVILYVIRCQTGASSIADFLVENL 120 Query: 125 ERRVVFRRAM---KRAVQSAMRF 144 E+R+ ++ K+ ++ + Sbjct: 121 EKRIPYKIVFVLLKKHLKKIRQR 143 >gi|10802926|gb|AAG23674.1|AF288091_19 ribosomal protein S3 [Thraustochytrium aureum] Length = 251 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 6/145 (4%) Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124 I + + + I K + +I + + ++ TL I QL Sbjct: 95 YIEFFFLKKPIKIYLISIKPTSNGKFFRSRGLKDIQDVLQILDNFPLHKTLN-FFICAQL 153 Query: 125 ERRVVFRRAMKRAVQSAMRFGA-----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 E+ ++ + Q G+K+ GR+NG++ S+T G +PL + Sbjct: 154 EKENHHQKIIDTIFQQVKINFQFYTKVKGIKISIKGRVNGSDRSKTHLLELGSIPLNSFN 213 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204 A+I + TA+G G+K+Y++ Sbjct: 214 ANIFFNFQHVVTAFGVYGVKIYINY 238 >gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus] Length = 145 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 17 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 76 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 77 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 136 Query: 158 NGAELSRTEC 167 G + +++ Sbjct: 137 RG-QRAKSMK 145 >gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus] Length = 147 Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 19 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 78 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L Sbjct: 79 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 138 Query: 158 NGAELSRTEC 167 G + +++ Sbjct: 139 RG-QRAKSMK 147 >gi|118724846|gb|ABL10998.1| ribosomal protein S3 [Codium intertextum] gi|118724849|gb|ABL11000.1| ribosomal protein S3 [Codium intertextum] Length = 44 Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGPVPLQSLAANIDYTCQIAKTIYGILGIKIWIFQK 43 >gi|207110501|ref|ZP_03244663.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_CA4C1] Length = 100 Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 40/93 (43%), Positives = 61/93 (65%) Query: 33 LHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS 92 + ED KIR++L+ L AGV++I+IER K R+ V +ARPGLIIGKKG DIEK+++ L Sbjct: 3 IDEDNKIRKFLKKELYYAGVSEIVIERAAKKLRVTVVAARPGLIIGKKGVDIEKVKEGLK 62 Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125 + E+ +++ EV +P+ +A L L+ Sbjct: 63 TLIKKEVSINIKEVKRPQADAQLALSFFLSPLK 95 >gi|118724750|gb|ABL10934.1| ribosomal protein S3 [Codium coralloides] Length = 44 Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 21/43 (48%), Positives = 32/43 (74%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY + +A+T YG GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTSQIAKTIYGILGIKIWIFQK 43 >gi|302749091|gb|ADL64025.1| ribosomal protein S3 [Tinospora sagittata] Length = 470 Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 5/149 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + + + M G +G+++ Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 441 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHI 182 SGR GAE++RTEC G+ I Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKI 470 >gi|302748790|gb|ADL63875.1| ribosomal protein S3 [Hua gabonii] Length = 473 Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 327 KVMELIEQLINLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 383 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL + FR + VQ M+ G +G+++ Sbjct: 384 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVQDIPLVMKKGVEGIRI 443 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAH 181 SGR GAE++RTEC G+ Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFNQK 473 >gi|118724894|gb|ABL11030.1| ribosomal protein S3 [Codium megalophysum] Length = 56 Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 31/46 (67%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208 +RTE +G+VPLQ+L A+IDY A+T YG GIK+++ + + Sbjct: 1 ARTEWVRKGQVPLQSLAANIDYSFQTAKTIYGILGIKIWIFQKKSI 46 >gi|322816239|gb|EFZ24621.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi] Length = 162 Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 4/136 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L+ L G A + T I++ + + ++G+KG I ++ ++ + Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ L V ++A A+S+ +L + RRA ++ M GA G +V G++ Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141 Query: 158 NGAELSRTECYLEGRV 173 G + +++ + +G + Sbjct: 142 KG-QRAKSMTFRDGYM 156 >gi|313768508|ref|YP_004062184.1| ribosomal protein S3 [Gracilariophila oryzoides] gi|312844635|gb|ADR03200.1| ribosomal protein S3 [Gracilariophila oryzoides] Length = 231 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 85/237 (35%), Gaps = 42/237 (17%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-------------ALLHEDLKIREYLQCHL 47 M +KINPI RLG+ W+ + G ++ + + ++L Sbjct: 1 MAKKINPISLRLGLTQVWDFTLQSYGKLISWHILLLLKQLQLKKVVAQIFNLNKFL---- 56 Query: 48 KQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEV 106 V + H + +Y + KK + I K + + ++ L + Sbjct: 57 ----VGEQEFWYYHNKLFLNIYFTDHIVKNQKKYSFIFKKIALLIFEWFSLKVQLRIFRK 112 Query: 107 PKPEINATLI---AQSIAQQ--------------LERRVVFRRAMKRAVQSAMRFGADGV 149 L+ A + +Q LE+ + + + + + G Sbjct: 113 TNWITTPNLLINYATYLLKQHKNPNKVLWQLCQFLEKNLNYTKIVHSSC-GIHLVNLKGF 171 Query: 150 KVIASGRLN--GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 K+ GR + ++S++ G + L +L++ +++ T GSCG+++++ Sbjct: 172 KIRLVGRSDNTKTQMSKSIQQGFGSLSLMSLKSRVEFANTELYTKLGSCGLQIWLFY 228 >gi|269986910|gb|EEZ93186.1| KH type 2 domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 223 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 17/184 (9%) Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94 D REYL + G++ I IE+T +I++ + +PG II + + + K+L Sbjct: 12 NDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRESSKELGEY 71 Query: 95 TNSEIHLSVNE-VPKPEINATLIAQSIAQQLERR--VVFRRAMKRAVQSAMRFGADGVKV 151 N E E P ++ ++A SIA ++ + + ++ +A+ S M GA GV++ Sbjct: 72 FNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMSAGARGVEI 131 Query: 152 IASGRLNGAELSRTECYL--------EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G + E + + G+V +R+ GS GIKV + Sbjct: 132 EIGGVIK--ERAAHFKFRPTGSVMPKTGQVEFFGVRS----AKKQLVLKRGSIGIKVTIV 185 Query: 204 LRDE 207 + E Sbjct: 186 VPTE 189 >gi|28189312|dbj|BAC56347.1| similar to S3 ribosomal protein [Bos taurus] Length = 138 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 7/99 (7%) Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLR 179 +L + RRA ++ M GA G +V+ SG+L G + + + +++G + + Sbjct: 2 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAXSMKFVDGLMIHSGDPVN 60 Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214 ++D G GIKV + L ++ Sbjct: 61 YYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 99 >gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum] Length = 163 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 4/141 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + S Sbjct: 23 EFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLGEKGQSIRELTAVVQKRFGFPES 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A A+S+ +L + RR +Q M GA G +V SG+L Sbjct: 83 SVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCYGVLQFIMESGAKGGEVGVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTL 178 G + +++ +++G + L T+ Sbjct: 143 RG-QRAKSMMFVDGLMTLLTI 162 >gi|393463|emb|CAA46980.1| unnamed protein product [Chlamydomonas reinhardtii] Length = 271 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49 MGQK++P+ FR+G+ S+WFA + Y + ED +R L Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51 >gi|255529385|gb|ACU12630.1| ribosomal protein S3 [Codium fragile] Length = 40 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 17/39 (43%), Positives = 25/39 (64%) Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +G+VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 WIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 39 >gi|118724711|gb|ABL10908.1| ribosomal protein S3 [Codium arabicum] gi|118724714|gb|ABL10910.1| ribosomal protein S3 [Codium arabicum] Length = 44 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 32/43 (74%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE +G+VPLQ+L A+IDY + +A+T YG GIK+++ + Sbjct: 1 ARTEWVQDGQVPLQSLAANIDYTSQIAKTIYGILGIKIWIFQK 43 >gi|74325191|ref|YP_316611.1| ribosomal protein S3 [Thalassiosira pseudonana] gi|74100257|gb|AAZ99418.1| ribosomal protein S3 [Thalassiosira pseudonana] Length = 308 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 25/165 (15%) Query: 62 KNCRIIVYSARPGLIIGKK-GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI--------N 112 ++ ++ L K + K K + + S + + + Sbjct: 140 TKGKVNIFVTMQNLNNQKNLSYNRIKNWKTIFKQLKKFVRNSFFKEAINILFVNITKRKS 199 Query: 113 ATLIAQSIAQQLE-------------RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGR 156 A L+A+ I+ Q + + F +K+ ++ +A G G+K++ GR Sbjct: 200 AKLLAEFISDQFKINQLKTDQMAISRKDNYFLGFLKQTIKLLINAEVSGLTGIKIVIKGR 259 Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 N A +++ G+ LQ+ + IDY + A T G+ G+KV+ Sbjct: 260 FNRAPRAKSVTIQFGKFSLQSFDSKIDYFQSTAYTINGTFGVKVW 304 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 4/129 (3%) Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGA-LLHEDLKIREYLQCH--LKQAGVAKIL 56 MGQK++ +FRLGV W + + +E + L++ L+I++YL L + + Sbjct: 1 MGQKVDARIFRLGVGKKNWELKHIEKNNEESSLYLYKTLEIQKYLNRFFSLYKVKIHNCK 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 I ++ + ++ + I ++ K +KKLS N+ L Sbjct: 61 IFYSNNSLQLFISFYITEKTIYIINKNLTKYQKKLSIRFKRPCIQKKNKKSILSYKPNLK 120 Query: 117 AQSIAQQLE 125 + Q+ + Sbjct: 121 QTMMLQEFQ 129 >gi|319412276|gb|ADV41813.1| ribosomal protein S3 [Bigelowiella natans] Length = 252 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 33/58 (56%) Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G++++ SG+LNG + + + G +PLQ IDY V T +G GIK+++ R Sbjct: 189 GLRLLISGKLNGRPRKKKKEFRFGIMPLQAFSHDIDYSYRVVVTKFGVFGIKLWLFKR 246 >gi|302748685|gb|ADL63823.1| ribosomal protein S3 [Curtisia dentata] Length = 435 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 5/146 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 291 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 349 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++ Sbjct: 350 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 409 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLR 179 SGRL GAE++RTEC G+ Sbjct: 410 SGRLKGAEIARTECGKYGKTSRNVFN 435 >gi|313768536|ref|YP_004062211.1| ribosomal protein S3 [Gracilariopsis andersonii] gi|312844663|gb|ADR03227.1| ribosomal protein S3 [Gracilariopsis andersonii] Length = 231 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 44/238 (18%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--------------- 45 M +KINPI RLG+ W+ F YG L I Y+ Sbjct: 1 MAKKINPISLRLGLTQVWD---FTL-QNYGKL------ISWYVLLLLKQLQLKRVVAQIF 50 Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVN 104 + + V + H + VY + K + I K + + ++ L V Sbjct: 51 NFNKFLVGEQEFWYYHNKLFLNVYFTDHIIKNQNKYSLILKNISLLIFEWFSLKVQLRVF 110 Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF----------------GADG 148 L+ + LE++ + + + Q + + G Sbjct: 111 RKTNWITTPDLLISYASYLLEQQKNPNKVLWQLCQFSEKQLNCTKIVYSSRGIRLVNLKG 170 Query: 149 VKVIASGRLNGA--ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 K+ GR + ++S++ G + L +L++ +++ + T GSCG+++++ Sbjct: 171 FKIRLVGRFDNTKNQMSKSIQQGFGSLSLMSLKSRVEFVSKELYTKLGSCGLQIWLFY 228 >gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea] Length = 156 Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + + ++G+KG I ++ +K N Sbjct: 22 EFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGEKGRRIRELTAVVQKRFNFPEG 81 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + RRA ++ M A G +V+ SG+L Sbjct: 82 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLKFIMESQAKGCEVVVSGKL 141 Query: 158 NGAELSRTECYLEGRV 173 G + +++ +++G + Sbjct: 142 RG-QRAKSMTFVDGLM 156 >gi|1171597|emb|CAA64581.1| rps3 [Plasmodium falciparum] Length = 214 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 20/218 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWF---ARGSEYGALLHEDLKIR-----------EYLQCH 46 MGQK++P++FR + + + ++ ++ Y + I + Sbjct: 1 MGQKVHPLIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYKEDNYINI 60 Query: 47 LKQAGVAKILIERTHKNCRIIVYSARP-GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105 + K +I N +Y+ + +++ + + ++ N Sbjct: 61 NINFSINKFVITFFLYNKYYNIYNLKYIFILLNYFNYYYYNYYNYMCFLKIKYVNNINNI 120 Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165 + + +L ++ +K+ F G+K+ SGR + ++ Sbjct: 121 NVIMYYIKKYYIKYKSLKLIFDYLYNNILKK-----NNFNIKGLKIKFSGRFKNSLKTKI 175 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 E Y+ G + L TL +I Y + T YG IK++++ Sbjct: 176 EIYIYGIISLSTLNNNIKYINDIINTKYGILSIKIWLN 213 >gi|41203465|ref|NP_957725.1| ribosomal protein S3 [Emiliania huxleyi] gi|33114151|gb|AAP94707.1| ribosomal protein S3 [Emiliania huxleyi] Length = 283 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 99/282 (35%), Gaps = 77/282 (27%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV-AKILIER 59 M QK NPIL RL +W + + ++ L DL+IR ++ K + + + + Sbjct: 1 MSQKTNPILSRLNNRRSWLTINSSDNRQFNNLFFTDLQIRYFISVVSKFFSILSDKPLIK 60 Query: 60 THKNCRIIVYSARPGLIIG----------------------------------------- 78 T+K + + S +++ Sbjct: 61 TYKFNSVFLRSNFTTIMLMGWPRALKKRIFSFNSRVSSYKKVRENHLNFAHFFGLTRFVL 120 Query: 79 --------KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE----- 125 +K +K+ +++ + +I S + +A +IA I Q++ Sbjct: 121 YDSVLRNLQKNRKQNASKKRKTSVLSKKIVKSTDFSLVRSNSAQIIANYIGWQIQASLKQ 180 Query: 126 RRVVFRRAMKRAVQSAMRFGAD--------------------GVKVIASGRLNGAELSRT 165 R F+ K+ + ++ GVKVI +GR + R Sbjct: 181 RDWNFQSNFKKGINKTIQSFLKRNVDQTVKSILSMKSKNPICGVKVICAGRWKKTKSGRK 240 Query: 166 ECYL--EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + + +G++ +Q+ + +D+G T +GS KV V+ Sbjct: 241 QKFTLYKGKLAMQSYSSFLDFGFYHGNTKFGSFSFKVLVAYN 282 >gi|41057930|gb|AAR98922.1| ribosomal protein S3 [Ostrinia nubilalis] Length = 125 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 47 LKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSV 103 L + G + + + T II+ + R ++G+KG I ++ +K N+ + L Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + + Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRA 119 Query: 164 RTECY 168 ++ + Sbjct: 120 KSMKF 124 >gi|288191225|gb|ADC43965.1| ribosomal protein S3 [Marathrum cf. oxycarpum Cachoeirc 9/1996] Length = 405 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%) Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQS 140 I+K+ LSN TN+ I + ++ +A+ IAQ I+ +L ++++ FR + + V+ Sbjct: 296 FSIKKMLSLLSNRTNTNIFIFSVKIQSVYQSASPIAQDISLKLRKKKISFRSSFSKIVKE 355 Query: 141 AM---RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 + G +G+++ SGR G +++RTEC G+ IDY TA Sbjct: 356 IEFGLKKGVEGIRICCSGRSKGKKIARTECGNYGKTSRNVFNQKIDYATA 405 >gi|242079979|ref|XP_002444758.1| hypothetical protein SORBIDRAFT_07g027430 [Sorghum bicolor] gi|241941108|gb|EES14253.1| hypothetical protein SORBIDRAFT_07g027430 [Sorghum bicolor] Length = 149 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 46/75 (61%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 ++EK +K N N +++++ +V +P ++A+ IA QL+ RV F++AMK+A++ Sbjct: 74 ELEKDFQKGVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFQKAMKKAIELTK 133 Query: 143 RFGADGVKVIASGRL 157 + G+K+ +G L Sbjct: 134 KADIKGIKIQIAGCL 148 >gi|302748873|gb|ADL63916.1| ribosomal protein S3 [Meliosma squamulata] Length = 454 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 5/146 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+ Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++ Sbjct: 369 NTFIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLR 179 SGRL GAE++RTEC G+ Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFH 454 >gi|118724705|gb|ABL10904.1| ribosomal protein S3 [Codium adhaerens] Length = 44 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 30/43 (69%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQ+L A+IDY +A+T G GIK+++ + Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTFQIAKTIXGILGIKIWIFQK 43 >gi|118724861|gb|ABL11008.1| ribosomal protein S3 [Codium isthmocladum] Length = 44 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 28/43 (65%) Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +RTE EG+VPLQTL A+ID +T YG GIK+++ + Sbjct: 1 ARTEWVREGQVPLQTLAANIDXXFRTXKTIYGXLGIKIWIFQK 43 >gi|302749027|gb|ADL63993.1| ribosomal protein S3 [Scrophularia marilandica] Length = 424 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 9/144 (6%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + + ++ I + + G +++K+R LSN T Sbjct: 284 KVMELIEKFIDLGRIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 340 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151 N+ + ++ +A+ IAQ I+ QL +R FR + + V++ M+ G G+++ Sbjct: 341 NTNTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSILSQIVKNIPLVMKKGVTGIRI 400 Query: 152 IASGRLNGAELSRTECYLEGRVPL 175 SGR GAE++RTEC G+ Sbjct: 401 CCSGRSEGAEIARTECGKYGKTSC 424 >gi|11467072|ref|NP_042548.1| ribosomal protein S3 [Acanthamoeba castellanii] gi|1173300|sp|P46754|RT03_ACACA RecName: Full=Ribosomal protein S3, mitochondrial gi|562053|gb|AAD11841.1| ribosomal protein S3 [Acanthamoeba castellanii] Length = 298 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 12/185 (6%) Query: 27 SEYGALLHEDLKIRE---YLQCHLKQAGVAKILIERTHKNCRIIVY--SARPGLIIGKKG 81 +Y L ++ ++++ L ++ L KN + +Y S + + K Sbjct: 109 KKYRKALRQNKQLKQGLFMLLKKRVILRYSRKLFFLFIKNKILKIYWESFKTLSLFYLKR 168 Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQS 140 K+ + S+++++ N + + +I + L +F+ MK+ Sbjct: 169 FSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYTIWEVLRNINFLFKSLMKK---- 224 Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 R G K+ SGR + + + G + T+++ +DY Y SC IKV Sbjct: 225 --RKLVKGYKITCSGRFSRKQRTTYSWKAFGSLAFSTVKSKLDYSYKTIALKYSSCTIKV 282 Query: 201 YVSLR 205 +V L Sbjct: 283 WVRLG 287 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 11/139 (7%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI----REYLQCHLKQAGVA--- 53 MG INPI +RL WN+ WF+ Y L+++D+ I R++L HL Sbjct: 1 MGHIINPISYRLYNIRYWNNNWFSGSLNYSYLINQDILIDRFFRKFLTTHLDSTNAGIIF 60 Query: 54 -KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112 + I R+ N + VY L + + + N + + + + Sbjct: 61 VNLKIIRSFNNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQ 120 Query: 113 ATLIAQSIAQQLERRVVFR 131 Q + L++RV+ R Sbjct: 121 LK---QGLFMLLKKRVILR 136 >gi|254751222|ref|ZP_05203260.1| 30S ribosomal protein S3 [Bacillus anthracis str. Vollum] Length = 26 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 16/26 (61%), Positives = 18/26 (69%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARG 26 MGQK+NPI R+GV W SRWFA Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAEK 26 >gi|118724819|gb|ABL10980.1| ribosomal protein S3 [Codium galeatum] Length = 33 Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 22/33 (66%) Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 VPLQSLSANIDYCCRTAKTIYGILGIKIWIFQP 33 >gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus] Length = 128 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 7/90 (7%) Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188 RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D Sbjct: 1 RRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 59 Query: 189 AETAYGSCGIKVYVSLR----DEVSDSDST 214 G GIKV + L ++ Sbjct: 60 VLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 89 >gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala] Length = 170 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 5/150 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97 E+L L + G + + + T II+ + R ++G+KG I ++ +K + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLGEKGRRIRELTSVVQKRFSFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L +V + A +S+ +L + R+A ++ M GA+G +V+ SG+L Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACYGVLRFIMESGANGCEVVVSGKL 142 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 G + ++ +++G + + DY Sbjct: 143 RG-QRAKALKFVDGLM-IHRGEPTNDYAET 170 >gi|224999226|gb|ACN78384.1| ribosomal protein S3 [Codium fragile] Length = 34 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 22/33 (66%) Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 VPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 33 >gi|255529409|gb|ACU12646.1| ribosomal protein S3 [Codium fragile] Length = 35 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 23/34 (67%) Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +VPLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 KVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 34 >gi|324309745|gb|ADY18526.1| ribosomal protein S3 [Phaeodactylum tricornutum] Length = 367 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS--EYGALLHEDLKIREYLQCHLKQAG--VAKIL 56 MGQK NP +FRLG W S+ + E DL+IR+++ LK G + Sbjct: 1 MGQKTNPTIFRLGKTKKWKSK-YIEKKSPESALYAFRDLEIRKFINKILKDKGLLIHNCQ 59 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116 + I + + K ++ L + Sbjct: 60 LRYLENELHIFLSYCITAKAL--------ATIKIHHKGQGVKLKLQKTNFTENFREKYFT 111 Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 + +L+R V ++R ++ + G K + G++ + + Y R+ Sbjct: 112 LEK---KLKRYVHYQRIIENCHYTTTVKKYLGKKQFSKGKIAIKKSHCSLKYRRARI 165 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 75/174 (43%), Gaps = 11/174 (6%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCR--IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 + + +K+ I K + + + I KK I ++RK + E Sbjct: 193 NCVSKSISFFTNSKLDIFLNLKQLNKPTRIRFTKIQIRILKK--IIGQLRKYKHSAFFEE 250 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAV---QSAMRFGADGVKVI 152 + E + L+A+ +A +L ++ F +K A+ + + +K++ Sbjct: 251 GINLILEYTLNSQPSNLLAEFVANELRKQKRHNFFLGFIKSALHLLNNNIFVSQKNIKLM 310 Query: 153 ASGRLNGAELSRTECYLEGR-VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 GR NG ++ + G+ V + ++++++DY V+ T+ G+ G+K++ + Sbjct: 311 IKGRFNGTPRAKKRVMIIGKGVSVLSIKSNLDYAETVSYTSNGTFGVKIWTCEK 364 >gi|133907947|gb|ABO42433.1| ribosomal protein S3 [Tetrastigma obovatum] Length = 447 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 11/149 (7%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95 K+ E ++ + G+ ++ I + + G +++K+R LSN T Sbjct: 303 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRRIPYGXNSYLNEVKKMRSLLSNRT 359 Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150 N+ + ++ +A+ IAQ I+ Q R +F + +K + M+ G +G++ Sbjct: 360 NTNTLIESVKIKSVYQSASPIAQDISFQPRNXTRSFRSLFSKIVKD-IPLVMKKGVEGIR 418 Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLR 179 + SGR GAE++ TEC G+ Sbjct: 419 ICCSGRSKGAEIAXTECGKYGKTSRNVFN 447 >gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus] Length = 135 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 6/129 (4%) Query: 71 ARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERR 127 R ++G+KG I ++ + + L +V + A A+S+ +L Sbjct: 7 YRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGG 66 Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYG 185 + RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D Sbjct: 67 LAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTA 125 Query: 186 TAVAETAYG 194 G Sbjct: 126 VRHVLLRQG 134 >gi|270055836|gb|ACZ59179.1| ribosomal protein S3 [Phacelia insularis var. insularis] gi|270055848|gb|ACZ59187.1| ribosomal protein S3 [Phacelia ivesiana] gi|270055860|gb|ACZ59195.1| ribosomal protein S3 [Phacelia californica] Length = 33 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 22/33 (66%) Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 LQT+RA IDY + T YG GIK+++ + DE Sbjct: 1 LQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDDE 33 >gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7] Length = 110 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHID 183 + + RRA ++ M GA G +VI SG+L A+ +++ + +G + + ++ Sbjct: 1 KGLAVRRACYGVLRHIMESGAKGCEVIVSGKLR-AQRAKSMKFRDGYLISTGEPSKRFVN 59 Query: 184 YGTAVAETAYGSCGIKVYVSLR 205 T A+ G GIKV + L Sbjct: 60 TATRSAQLKQGVLGIKVKIMLP 81 >gi|255529426|gb|ACU12657.1| ribosomal protein S3 [Codium fragile] Length = 33 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 15/32 (46%), Positives = 21/32 (65%) Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 PLQ+L A+IDY A+T YG GIK+++ Sbjct: 1 PLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 32 >gi|223942381|gb|ACN25274.1| unknown [Zea mays] Length = 148 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151 + L +V + A A+S+ +L + RRA ++ M GA G +V Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEV 136 >gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens] Length = 133 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 3/115 (2%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142 ++ + +K + L +V + A A+S+ +L + RRA ++ M Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71 Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195 GA G +V+ SG+L G + +++ +++G + + ++D G Sbjct: 72 ESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125 >gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348] gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348] Length = 214 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 69/170 (40%), Gaps = 6/170 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNS 97 E ++ A I ++ +I + P ++ KK ++ + + NM Sbjct: 21 ELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQLQNMIAQRLNMIPE 80 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 I + ++ + A+ + Q ++R + ++S + G GV + SG++ Sbjct: 81 HIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQAGGQGVCIRVSGKI 140 Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G + ++ +++G + Q + +I A+A G GI++ + L Sbjct: 141 KG-QRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISIMLP 189 >gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata] Length = 126 Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117 II+ + R ++G++G I ++ + + L +V + + A A Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60 Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173 +S+ +L + RRA ++ M GA G +V+ SG+L G + +++ + +G + Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFTDGLM 115 >gi|130076568|gb|ABO31942.1| ribosomal protein S3 [Exbucklandia longipetala] Length = 444 Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 5/141 (3%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 K+ E + + G+ + I+ II+ + R +++K+R LSN TN+ Sbjct: 305 KVIELIDKFINPGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 363 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153 + ++ +A+ IAQ I+ Q +R FR + V++ M+ G G+++ Sbjct: 364 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSQIVKNIPLVMKKGVGGIRICC 423 Query: 154 SGRLNGAELSRTECYLEGRVP 174 SGR GA+++RTEC G+ Sbjct: 424 SGRSKGAKIARTECGKYGKTS 444 >gi|288191307|gb|ADC44006.1| ribosomal protein S3 [Medusandra richardsiana] Length = 139 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123 I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q Sbjct: 18 IEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQ 77 Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179 + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ Sbjct: 78 PRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFN 137 Query: 180 AH 181 Sbjct: 138 QK 139 >gi|11466484|ref|NP_038187.1| ribosomal protein S3 [Chrysodidymus synuroideus] gi|7110481|gb|AAF36953.1|AF222718_27 ribosomal protein S3 [Chrysodidymus synuroideus] Length = 265 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197 +++ G+K++ +G+L G S T +G +P QTL+ ID+ A T YG G Sbjct: 197 IKNKFSNNILGIKIVLNGKLRGKVRSNTIIISKGSIPNQTLKKRIDFNQADIFTKYGVYG 256 Query: 198 IKVYVSL 204 IK++V+L Sbjct: 257 IKIWVNL 263 >gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983] Length = 157 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%) Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175 A+S+ +L + RRA ++ M GA GV+V SG+L A+ ++ + +G + L Sbjct: 2 QAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-L 59 Query: 176 QTLRAH---IDYGTAVAETAYGSCGIKVYVSL---------RDEVSDSDSTIPAAEH 220 T +D + G GI+V + + D TI + Sbjct: 60 STGTPKEMYVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 116 >gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R] gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R] Length = 136 Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +V+ SG+L A +++ + +G + Q +DY G GIK Sbjct: 1 MESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIK 59 Query: 200 VYVSLR----DEVSDSDSTIPAAE 219 V + +V + + Sbjct: 60 VKIMKGWDPEGQVGPRKPLPDSVQ 83 >gi|255529374|gb|ACU12623.1| ribosomal protein S3 [Codium fragile] gi|255529423|gb|ACU12655.1| ribosomal protein S3 [Codium fragile] gi|255529429|gb|ACU12659.1| ribosomal protein S3 [Codium fragile] gi|255529432|gb|ACU12661.1| ribosomal protein S3 [Codium fragile] gi|255529435|gb|ACU12663.1| ribosomal protein S3 [Codium fragile] gi|255529438|gb|ACU12665.1| ribosomal protein S3 [Codium fragile] gi|255529441|gb|ACU12667.1| ribosomal protein S3 [Codium fragile] gi|255529444|gb|ACU12669.1| ribosomal protein S3 [Codium fragile] gi|255529447|gb|ACU12671.1| ribosomal protein S3 [Codium fragile] gi|255529452|gb|ACU12674.1| ribosomal protein S3 [Codium fragile] gi|255529455|gb|ACU12676.1| ribosomal protein S3 [Codium fragile] gi|255529458|gb|ACU12678.1| ribosomal protein S3 [Codium fragile] gi|255529461|gb|ACU12680.1| ribosomal protein S3 [Codium fragile] Length = 32 Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%) Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 LQ+L A+IDY A+T YG GIK+++ Sbjct: 1 LQSLAANIDYCCRTAKTIYGILGIKIWIFQP 31 >gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus] Length = 111 Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%) Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPE 110 + + T II+ + R ++G+KG I ++ +K + + L +V Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60 Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159 + A A+S+ +L + RRA ++ M GA G +V+ SG+L G Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 109 >gi|221103188|ref|XP_002170678.1| PREDICTED: similar to ribosomal protein S3, partial [Hydra magnipapillata] Length = 122 Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 133 AMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAE 190 A V+ M GA G +VI SG+L G + +++ + +G + ++ +ID Sbjct: 1 ACYGVVRFIMESGAKGCEVIVSGKLRG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVY 59 Query: 191 TAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224 G GIKV + D T + + Sbjct: 60 LRQGVLGIKVKIM-----LPWDPTGKTGPKKPLP 88 >gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis] gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis] Length = 147 Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 3/113 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150 + L +V + A A+S+ +L + RRA ++ M GA G++ Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGLR 135 >gi|291010626|ref|YP_003495139.1| ribosomal protein S3 [Pycnococcus provasolii] gi|258406749|gb|ACV72095.1| ribosomal protein S3 [Pycnococcus provasolii] Length = 324 Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 23/161 (14%) Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103 + L +I++ + +I ++ + ++++ + I Sbjct: 187 KGSLLLRFTENFIIKQFKQAYKICIFDTKKSNFFFSSQLFVKELCFLFLVLKKKRIAKEF 246 Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163 +V + + +FR VQ + FG GV V+ SGRL G + Sbjct: 247 FKVFRSWL-----------------IFR------VQKSFAFGIKGVSVVISGRLPGRGKA 283 Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 + + G+ P Q + +D+ ++ G +KV+V Sbjct: 284 GIKKFRVGKTPFQNSKQRLDFWHQSFRSSRGVFHVKVWVLY 324 >gi|118725005|gb|ABL11104.1| ribosomal protein S3 [Codium sp. DB2006] Length = 34 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 16/33 (48%), Positives = 24/33 (72%) Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 VPLQ+L A+IDY +A+T YG GIK+++ + Sbjct: 1 VPLQSLAANIDYTFQIAKTIYGILGIKIWIFQK 33 >gi|326632110|gb|ADZ99057.1| ribosomal protein S3 [Physarum polycephalum] Length = 478 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 1/127 (0%) Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 I + K + ++ + + +A + I+ +L + F +K ++ R Sbjct: 341 IFTMAKTTFIPNDRQLIVRFLGLNNRNYSAQFLVNYISIKLGQYFNFNSIIKPIIRYYKR 400 Query: 144 FG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 DG + I SGRL E + +PL T + +DY + +G GIK+Y+ Sbjct: 401 RSAIDGFRFIISGRLTRKERAAYIVKAYKAMPLATAKIRVDYASDFKIMRFGVVGIKIYL 460 Query: 203 SLRDEVS 209 ++V Sbjct: 461 LTSEDVP 467 Score = 40.7 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 1 MGQKINPILFRLGVNCTWN 19 MG KI+P +FRLG++ W Sbjct: 1 MGHKIHPDIFRLGISKDWQ 19 >gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group] Length = 108 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194 ++ M GA G +VI SG+L A+ +++ + +G + Q + +ID G Sbjct: 2 VLRFVMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 60 Query: 195 SCGIKVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226 GIKV + L + +V + +++ Sbjct: 61 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 96 >gi|323435099|ref|YP_004222317.1| hypothetical protein BevumaM_p082 [Beta vulgaris subsp. maritima] gi|317905653|emb|CBX33229.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|319439832|emb|CBX33302.1| hypothetical protein [Beta vulgaris subsp. maritima] Length = 273 Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF YG L+++DL +R Y+ L + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDLNLRSYV----GSIRPPTRLTFGS 55 Query: 61 HKNCRIIVYSAR 72 II++ + Sbjct: 56 RPGRCIIIHCQK 67 >gi|9838466|ref|NP_064079.1| orf246 [Beta vulgaris subsp. vulgaris] gi|9087328|dbj|BAA99472.1| orf246 [Beta vulgaris subsp. vulgaris] Length = 246 Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF YG L+++DL +R Y+ L + Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDLNLRSYV----GSIRPPTRLTFGS 55 Query: 61 HKNCRIIVYSAR 72 II++ + Sbjct: 56 RPGRCIIIHCQK 67 >gi|223927801|gb|ACN23521.1| ribosomal protein S3 [Halimeda discoidea] Length = 139 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 11/139 (7%) Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNC-RIIVYSARPGLIIGKKGTDIEK 86 +Y + ED +R L +A I I R + I++++ +P ++IG KG ++E Sbjct: 1 DYSKYVLEDNFVRTLLSKKYNRARFEXIQISRKIZXHLEIVIHAQKPDILIGXKGENLEI 60 Query: 87 IRKKLSNM--------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM--KR 136 +K++ NS++ + + ++ IA I + LE+R+ ++ + Sbjct: 61 FQKQIXTFIFQYRQIEWNSKLKVILYIFRXKTSASSAIADFIVEHLEKRIPYKVVFTLLK 120 Query: 137 AVQSAMRFGADGVKVIASG 155 + G+K+ SG Sbjct: 121 KHLXRKKQSTLGMKIQISG 139 >gi|321268743|gb|ADW79192.1| ribosomal protein S3 [Cyanophora paradoxa] Length = 214 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168 PE+ LI++ Q+ R +FR + +Q + G G K+ SGRL ++++RTE Sbjct: 90 PEMINILISRYFKQRKNYRFIFRTIVY-HIQKKFKHGIMGAKINLSGRLGKSQIARTEWI 148 Query: 169 LEG-------RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++PL + +I Y + G+ GIK +V LR Sbjct: 149 QSNNPFGGKTQLPLHKINTNIIYSYKTIFSKRGNIGIKTWVYLR 192 >gi|11466315|ref|NP_051143.1| ribosomal protein S3 [Cafeteria roenbergensis] gi|6180097|gb|AAF05794.1|AF193903_17 ribosomal protein S3 [Cafeteria roenbergensis] Length = 713 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA--KILIER 59 GQK+NP+ +R+G W + W+ YG +L++ L+I E +Q L + I Sbjct: 5 GQKVNPVGWRVGFYRKWKTLWYEESWNYGLMLNKTLRINELMQSFLLYKRLPALNCNIMV 64 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90 ++ + + ++ + ++K RK+ Sbjct: 65 ANQGTEKFIILVYFYNLREEETSQVKKRRKR 95 Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 125 ERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI 182 +R++ F R + R + + G+++ GR + +++ + G +PLQ A I Sbjct: 611 KRQIPFIRFLMRLITNLAGSVVRVKGLRIQFKGRFDRWNRTKSLVFTSGNIPLQRKDADI 670 Query: 183 DYGTAVAETAYGSCGIKVYVSLR 205 +YG++ G GI+++V Sbjct: 671 EYGSSHGLVKKGVYGIRLWVWYG 693 >gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa] gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens] Length = 126 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 132 RAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY---GTAV 188 RA ++ M GA G +V+ SG+L G + +++ +++G + + + DY T Sbjct: 1 RACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRH 58 Query: 189 AETAYGSCGIKVYVSLR 205 G GIKV + L Sbjct: 59 VLLRQGVLGIKVKIMLP 75 >gi|169838531|ref|ZP_02871719.1| 30S ribosomal protein S3 [candidate division TM7 single-cell isolate TM7a] Length = 33 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 22/33 (66%), Positives = 26/33 (78%) Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185 SGRLNGAE++R+E L GRVPL TLRA +DY Sbjct: 1 VSGRLNGAEIARSEWTLSGRVPLHTLRADVDYA 33 >gi|320148732|emb|CBJ23370.1| hypothetical protein [Beta vulgaris subsp. maritima] Length = 273 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60 M +K NPI RL +N + +S WF YG L+++D+ +R Y+ L Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYV----GSIRPPTRLTFGF 55 Query: 61 HKNCRIIVYSAR 72 II++ + Sbjct: 56 RPGKCIIIHCQK 67 >gi|15150731|ref|NP_150397.1| ribosomal protein S3 [Pylaiella littoralis] gi|15147737|emb|CAC50838.1| ribosomal protein S3 [Pylaiella littoralis] Length = 273 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 9/151 (5%) Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121 K R+ Y+ K+ T K K + + + +A A+ + Sbjct: 122 KINRLKSYTRSVPQPARKQMTFYGKSFNKSRYDYARYGLQLMYLLLLKKASAASFARFLK 181 Query: 122 QQLERRVVFRR------AMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLEGR 172 Q + R +R +K+A++S R+ G+K+ GR S+ + G Sbjct: 182 QNIRSRQRRKRHYQFLGYIKKALKSLERYKKIQGLKIQIKGRFTHKAKGRSQCWKHQIGS 241 Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 +PL L +I +TAYGS G+KV+V Sbjct: 242 MPLSNLDKNIHAEYTQTQTAYGSVGVKVWVC 272 >gi|270055857|gb|ACZ59193.1| ribosomal protein S3 [Phacelia argentea] Length = 30 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 +RA IDY + T YG GIK+++ + DE Sbjct: 1 IRAKIDYCSYTVRTIYGVLGIKIWIFIDDE 30 >gi|224034403|gb|ACN36277.1| unknown [Zea mays] Length = 103 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +VI SG+L A+ +++ + +G + Q + +ID G GIK Sbjct: 1 MESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 59 Query: 200 VYVSL----RDEVSD 210 V + L + +V Sbjct: 60 VKIMLDWDPKGKVGP 74 >gi|270055842|gb|ACZ59183.1| ribosomal protein S3 [Phacelia rotundifolia] Length = 29 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 RA IDY T YG GIK+++ + DE Sbjct: 1 RAKIDYCCYTVRTIYGVLGIKIWIFIDDE 29 >gi|270055863|gb|ACZ59197.1| ribosomal protein S3 [Phacelia bolanderi] gi|270055872|gb|ACZ59203.1| ribosomal protein S3 [Romanzoffia californica] Length = 29 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 RA IDY + T YG GIK+++ + DE Sbjct: 1 RAKIDYCSYTVRTIYGVLGIKIWIFIDDE 29 >gi|110816066|ref|YP_684398.1| ribosomal protein S3 [Oltmannsiellopsis viridis] gi|86450277|gb|ABC96356.1| ribosomal protein S3 [Oltmannsiellopsis viridis] Length = 229 Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ 49 MG KI PI RL V S W +Y L+++DLK+R Y++ + Sbjct: 1 MGHKITPISNRLSVGIRNPKSSW-VSSYDYAELINKDLKLRNYIKKLISN 49 >gi|290465606|gb|ADD25161.1| ribosomal protein S3 [Didymium iridis] gi|290465608|gb|ADD25162.1| ribosomal protein S3 [Didymium iridis] Length = 489 Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 1/116 (0%) Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIA 153 + + + +NA + +L + + ++ R DG ++I Sbjct: 363 NDRRLITRFYIMNNLNLNADFLLNYFMIKLGQYFSLNEILSPILRRLKRLTDLDGFRIIF 422 Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209 SGRL E + +PL T +A IDY + +G GIK+Y+ + V Sbjct: 423 SGRLTRKERAAYIVRSHKSMPLSTYKAKIDYASGFKIMKFGVVGIKIYLLYTNAVP 478 Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 13/19 (68%), Positives = 15/19 (78%) Query: 1 MGQKINPILFRLGVNCTWN 19 MG KINP +FRLGV+ WN Sbjct: 1 MGHKINPQIFRLGVSIDWN 19 >gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus] Length = 151 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +V+ SG+L G + +++ +++G + + ++D G GIK Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59 Query: 200 VYVSLR----DEVSDSDST 214 V + L ++ Sbjct: 60 VKIMLPWDPSGKIGPKKPL 78 >gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni] gi|238658341|emb|CAZ29399.1| 40S ribosomal protein S3, putative [Schistosoma mansoni] Length = 152 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 61/136 (44%), Gaps = 4/136 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L+ L G + + + K +I+ + + ++G+ I ++ L Sbjct: 6 EFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGFSDC 65 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + L V+++ ++A A+S+ +L + R+A ++ + GA GV VI SG++ Sbjct: 66 ALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVIVSGKI 125 Query: 158 NGAELSRTECYLEGRV 173 + ++ + G + Sbjct: 126 KD-QRAKAMKFCNGLI 140 >gi|270055851|gb|ACZ59189.1| ribosomal protein S3 [Phacelia tanacetifolia] gi|270055854|gb|ACZ59191.1| ribosomal protein S3 [Phacelia crenulata var. crenulata] Length = 29 Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207 RA IDY + T YG GIK+++ + DE Sbjct: 1 RAKIDYCSYTVRTIYGILGIKIWIFIDDE 29 >gi|255529371|gb|ACU12621.1| ribosomal protein S3 [Codium fragile] gi|255529377|gb|ACU12625.1| ribosomal protein S3 [Codium fragile] gi|255529391|gb|ACU12634.1| ribosomal protein S3 [Codium fragile] gi|255529394|gb|ACU12636.1| ribosomal protein S3 [Codium fragile] gi|255529397|gb|ACU12638.1| ribosomal protein S3 [Codium fragile] Length = 30 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 18/29 (62%) Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 +L A+IDY A+T YG GIK+++ Sbjct: 1 SLAANIDYCCRTAKTIYGILGIKIWIFQP 29 >gi|167933147|ref|ZP_02520234.1| 30S ribosomal protein S3 [candidate division TM7 single-cell isolate TM7b] Length = 118 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 45/61 (73%) Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150 + N+ N EI +++ EV KPE++A ++ +IA+Q+E +V +RRA+K A+ + MR GA+G+K Sbjct: 1 MKNLFNKEIQINIFEVRKPELDANIVGMNIARQVEGKVAYRRAIKMAIANTMRAGAEGIK 60 Query: 151 V 151 Sbjct: 61 F 61 >gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus] Length = 117 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +V+ SG+L G + +++ +++G + + ++D G GIK Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59 Query: 200 VYVSLR----DEVSDSDST 214 V + L ++ Sbjct: 60 VKIMLPWDPSGKIGPKKPL 78 >gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens] Length = 117 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +V+ SG+L G + +++ +++G + + ++D G GIK Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59 Query: 200 VYVSLR----DEVSDSDST 214 V + L ++ Sbjct: 60 VKIMLPWDPTGKIGPKKPL 78 >gi|270055839|gb|ACZ59181.1| ribosomal protein S3 [Phacelia linearis] gi|270055845|gb|ACZ59185.1| ribosomal protein S3 [Phacelia fremontii] gi|270055866|gb|ACZ59199.1| ribosomal protein S3 [Draperia systyla] gi|270055869|gb|ACZ59201.1| ribosomal protein S3 [Draperia systyla] Length = 28 Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207 A IDY + T YG GIK+++ + DE Sbjct: 1 AKIDYCSYTVRTIYGVLGIKIWIFIDDE 28 >gi|11465874|ref|NP_066423.1| ribosomal protein S3 [Ochromonas danica] gi|10505207|gb|AAG18389.1|AF287134_14 ribosomal protein S3 [Ochromonas danica] Length = 250 Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 34/64 (53%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201 GVK+I +GRL G ++T ++ G++PL + + I T YG G+K++ Sbjct: 187 KHSQIKGVKLIIAGRLKGKTRAKTSKFILGKIPLSSEKEKIKASQTHIYTVYGCFGLKLW 246 Query: 202 VSLR 205 V+ + Sbjct: 247 VNYK 250 >gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris] Length = 119 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198 + GA G +VI SG+L G + +++ + +G + ++ +ID G GI Sbjct: 6 ILESGAKGCEVIVSGKLRG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGI 64 Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224 KV + D T + + Sbjct: 65 KVKIM-----LPWDPTGKTGPKKPLP 85 >gi|331240642|ref|XP_003332971.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309311961|gb|EFP88552.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 140 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M A G +V+ SG+L A +++ + +G + Q +D G GIK Sbjct: 1 MESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGIK 59 Query: 200 VYVSLRDEVSDSDSTIPAA 218 V + ++ P Sbjct: 60 VKIMRGNDTEGRGGAPPKP 78 >gi|255529415|gb|ACU12650.1| ribosomal protein S3 [Codium fragile] Length = 28 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205 A+IDY A+T YG GIK+++ Sbjct: 2 ANIDYCCRTAKTIYGILGIKIWIFQP 27 >gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri] gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri] Length = 145 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 3/92 (3%) Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188 R A ++ M GA G +V+ SG+L G + ++ + +G + +R +I T Sbjct: 31 RSACYGVLRYIMESGAKGAEVVVSGKLRG-QRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89 Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 A G+ G++V + L + D Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPD 121 >gi|118724801|gb|ABL10968.1| ribosomal protein S3 [Codium fragile] Length = 27 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 16/26 (61%) Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205 A+IDY A+T YG GIK+++ Sbjct: 1 ANIDYCCRTAKTIYGILGIKIWIFQP 26 >gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla] Length = 108 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 7/90 (7%) Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200 GA G +V+ SG+L G + +++ +++G + + ++D G GIKV Sbjct: 1 ESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKV 59 Query: 201 YVSLR----DEVSDSDSTIPAAEHRVVEKD 226 + L ++ +++ Sbjct: 60 KIMLPWDPSGKIGPKHPLPDQISIVEPKEE 89 >gi|11466199|ref|NP_066522.1| ribosomal protein S3 [Naegleria gruberi] gi|10444234|gb|AAG17800.1|AF288092_25 ribosomal protein S3 [Naegleria gruberi] Length = 523 Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLE--------GRVPLQTLRAHIDYGTAVAETA 192 ++ G+++ +G +R Y + G++P +++ A IDY + A T Sbjct: 437 IKKYPLIGIRIECNGPPKRGRQARLVAYHQIVKNYKLFGKMPNKSVLADIDYYQSFARTK 496 Query: 193 YGSCGIKVYVSL 204 GS GIKV++ Sbjct: 497 QGSIGIKVWIFF 508 Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats. Identities = 11/133 (8%), Positives = 36/133 (27%), Gaps = 26/133 (19%) Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69 R+ +W + W+ + Y L D ++ +YL+ + + Sbjct: 10 LRIPHFNSWKTIWYEKDKNYSYLFFRDFQLFQYLKGLFYRLKMLTDDF------------ 57 Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 ++L ++ K ++ + + ++ Sbjct: 58 --------------YFDNLTNNCFYIKVNVYLYKFQIKKYFLSFFIDQYLLYNFFLKKRK 103 Query: 130 FRRAMKRAVQSAM 142 F+ + + + Sbjct: 104 FKHIISSSFSNTF 116 >gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum] Length = 102 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G +VI SG++ G + ++ + +G + + ++D + G GIK Sbjct: 1 MESGARGAEVIVSGKIKG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIK 59 Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224 V + D DS+ + + Sbjct: 60 VKIM-----MDHDSSGKKGPRKPLP 79 >gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao] Length = 86 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 37/82 (45%) Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136 G++ ++ + +K + + L +V + A A+S+ +L + RRA Sbjct: 5 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 64 Query: 137 AVQSAMRFGADGVKVIASGRLN 158 ++ M GA G +V+ SG L Sbjct: 65 VLRFIMESGAKGCEVMVSGXLR 86 >gi|268053583|ref|YP_003288941.1| ribosomal protein S3 [Saccharina religiosa] gi|262318203|dbj|BAI48527.1| ribosomal protein S3 [Saccharina religiosa] Length = 281 Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 9/153 (5%) Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T + R+ Y ++ K + + + K + +AT +A+ Sbjct: 120 TLRINRVKTYMRSVPKPARRQMAYFTKSFNHIRYDYARYGMQLMYLLIKNKASATSLARF 179 Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLE 170 + Q + R +R +K+ Q+ + G+K+ GR SR Y Sbjct: 180 LKQNICSRQRRKRHYQFLAYIKQGFQTLQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQM 239 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G++P+ L +I A +T YGS G+K+++ Sbjct: 240 GQMPISQLSKNIQAEYAQTQTGYGSVGLKIWIC 272 >gi|268053544|ref|YP_003288903.1| ribosomal protein S3 [Saccharina japonica] gi|268053622|ref|YP_003288979.1| ribosomal protein S3 [Saccharina ochotensis] gi|268053661|ref|YP_003289056.1| ribosomal protein S3 [Saccharina diabolica] gi|268053700|ref|YP_003289107.1| ribosomal protein S3 [Saccharina longipedalis] gi|262318164|dbj|BAI48489.1| ribosomal protein S3 [Saccharina japonica] gi|262318242|dbj|BAI48565.1| ribosomal protein S3 [Saccharina ochotensis] gi|262318281|dbj|BAI48603.1| ribosomal protein S3 [Saccharina diabolica] gi|262318320|dbj|BAI48641.1| ribosomal protein S3 [Saccharina longipedalis] Length = 281 Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 9/153 (5%) Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T + R+ Y ++ K + + + K + +AT +A+ Sbjct: 120 TLRINRVKTYMRSVPKPARRQMAYFTKSFNHIRYDYARYGMQLMYLLIKNKASATSLARF 179 Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLE 170 + Q + R +R +K+ Q+ + G+K+ GR SR Y Sbjct: 180 LKQNICSRQRRKRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQM 239 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G++P+ L +I A +T YGS G+K+++ Sbjct: 240 GQMPISQLSKNIQAEYAQTQTGYGSVGLKIWIC 272 >gi|319738233|emb|CBJ18009.1| ribosomal protein S3 [Ectocarpus siliculosus] Length = 273 Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181 +R F +K+A+++ + G K+ GR SR+ + G +PL L + Sbjct: 191 KRHYQFLGYIKQALKALEPYKEIQGFKIQIKGRFTHKAKGRSRSWKHQIGSMPLSQLDKN 250 Query: 182 IDYGTAVAETAYGSCGIKVYVSL 204 I A +TAYGS G+K+++ Sbjct: 251 IQAQYAQTQTAYGSVGLKIWICK 273 >gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata] Length = 105 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 7/73 (9%) Query: 148 GVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G +V+ SG+L G + +++ +++G + + ++D G GIKV + L Sbjct: 1 GCEVVVSGKLRG-QRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLP 59 Query: 206 ----DEVSDSDST 214 ++ Sbjct: 60 WDPAGKIGPKRPL 72 >gi|118724978|gb|ABL11086.1| ribosomal protein S3 [Codium yezoense] Length = 27 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQP 24 >gi|7524996|ref|NP_050094.1| ORF1740 [Dictyostelium discoideum] gi|1088430|dbj|BAA04740.1| unnamed protein product [Dictyostelium discoideum] gi|4958899|dbj|BAA78076.1| ORF1740 [Dictyostelium discoideum] Length = 1740 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 69/174 (39%), Gaps = 20/174 (11%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI+E ++ L + K I++ + +Y + + L N+ Sbjct: 1566 KIKELIKIFLYPLLITKRQIQKVRLRKKNKIY--------------LLMAQIFLYNIKQL 1611 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR------AMKRAVQSAMRFGADGVKV 151 + ++ + I +++ A+ + ++L+ R+ + +K + G KV Sbjct: 1612 VVSVNYSINFFGIIGSSITAEYVVRRLKERLELTKRNGSALLLKVMAKLMRSQHVVGCKV 1671 Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 SGRL G +++ + G + + +IDY +G CG+K+++ Sbjct: 1672 KYSGRLTGNSMAQQKVESRGLIGNSNMNVYIDYAQDNLVRKHGKCGLKLWIVRN 1725 >gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus] Length = 151 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA 137 + L +V + A A+S+ +L + RR ++ Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRVGSQS 122 >gi|58578648|ref|YP_203368.1| ribosomal protein S3 [Mortierella verticillata] gi|57545581|gb|AAW51705.1| ribosomal protein S3 [Mortierella verticillata] Length = 283 Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 85/259 (32%), Gaps = 57/259 (22%) Query: 1 MGQKINPILFRLGVNCTW--NSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58 MG K +P+ RL + W S +F SE D ++ + + A ++K Sbjct: 1 MGSK-HPLSLRLKTHNKWGETSYYFNSKSELHNYWGVDKIALNVIKHYFQFALISKPKFN 59 Query: 59 RTHKNCRIIVYSA------RPGLIIGKKGT----------------------DIEKIRKK 90 + I Y + G+ K+ K Sbjct: 60 KDSNKIVISFYYFLNLPVSKRFNPYGQSKRIQSSLQGDVTANNKNLLPLEAKGYSKLILK 119 Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-------RRVVFRRA---------- 133 LS + L + P +N+ ++AQ IA + R +F++A Sbjct: 120 LSRFYGKPVELRPVRIHYPYLNSYILAQYIAINIRLGNFNKLMRTLFKKAKLVRNNNINT 179 Query: 134 ------MKRAVQSAMRFGADGVKVIASGRL---NGAELSRTECYLEGRVPLQTLRAHIDY 184 +K + G+K+ SGRL A +R G + L + + ID Sbjct: 180 TNFRDLIKYSSLINRPQFLSGLKIQISGRLSQRKAASRTRIVRKSIGTLRLSSSTSLIDA 239 Query: 185 GTAVAETAYGSCGIKVYVS 203 + G+ +KV++S Sbjct: 240 SKFSFKGKNGAATVKVWLS 258 >gi|118724807|gb|ABL10972.1| ribosomal protein S3 [Codium fragile] gi|118724810|gb|ABL10974.1| ribosomal protein S3 [Codium fragile] Length = 25 Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQP 24 >gi|226508400|ref|NP_001142180.1| hypothetical protein LOC100274348 [Zea mays] gi|194707500|gb|ACF87834.1| unknown [Zea mays] Length = 133 Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132 + L +V + A A+S+ +L + RR Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117 >gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa] gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa] Length = 178 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 10/112 (8%) Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83 A G Y L E L L + G + + + T II+ + R ++G+KG Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65 Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132 I ++ +K + + L +V + A A+S+ +L + RR Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117 >gi|268164088|ref|YP_003288865.1| ribosomal protein S3 [Saccharina coriacea] gi|262318398|dbj|BAI48717.1| ribosomal protein S3 [Saccharina coriacea] Length = 281 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181 +R F +K+ Q+ + G+K+ GR SR Y G++P+ L + Sbjct: 191 KRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKN 250 Query: 182 IDYGTAVAETAYGSCGIKVYVS 203 I A +T YGS G+K+++ Sbjct: 251 IQAEYAQTQTGYGSVGLKIWIC 272 >gi|268164049|ref|YP_003288814.1| ribosomal protein S3 [Saccharina angustata] gi|262318359|dbj|BAI48679.1| ribosomal protein S3 [Saccharina angustata] Length = 281 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181 +R F +K+ Q+ + G+K+ GR SR Y G++P+ L + Sbjct: 191 KRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKN 250 Query: 182 IDYGTAVAETAYGSCGIKVYVS 203 I A +T YGS G+K+++ Sbjct: 251 IQAEYAQTQTGYGSVGLKIWIC 272 >gi|60117123|ref|YP_209586.1| ribosomal protein S3 [Polysphondylium pallidum] gi|51339687|gb|AAU00601.1| ribosomal protein S3 [Polysphondylium pallidum] Length = 660 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD-----GVKVIASGRLNGAELSRT 165 I + A + +++ R + +++K + + +R G KV +GRL+ + ++R Sbjct: 526 IEENINADMLLKRILRTMDITKSLKWLILNMLRKLEKSMSFFGFKVKFAGRLSASIMARV 585 Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + +G + + +IDY YG CGIKV++ Sbjct: 586 DIIQKGLISTNNMNVYIDYAKDSIVLKYGKCGIKVWLVRN 625 >gi|118724756|gb|ABL10938.1| ribosomal protein S3 [Codium cylindricum] gi|118724759|gb|ABL10940.1| ribosomal protein S3 [Codium cylindricum] Length = 37 Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207 IDY A+T YG GIK+++ + Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQPNI 26 >gi|84508528|ref|YP_448692.1| ribosomal protein S3 [Dictyota dichotoma] gi|45925696|gb|AAS79077.1| ribosomal protein S3 [Dictyota dichotoma] Length = 277 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 125 ERRVVFRRAMKRAVQSA-MRFGADGVKVIASGRL--NGAELSRTECYLEGRVPLQTLRAH 181 ++ F R +K+ ++ + G+K+ GR S+ Y G +PL +RA Sbjct: 194 KKHTDFTRFLKQGIEIFDSKKKIKGIKIQLKGRFGYKPKGRSKIWKYQLGSLPLSQIRAV 253 Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 I Y + A+T GS GIK ++ Sbjct: 254 IQYRSQQAQTKLGSVGIKTWIYYN 277 >gi|160688754|gb|ABX45170.1| ribosomal protein S3 [Polysphondylium pallidum] Length = 639 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 67/167 (40%), Gaps = 9/167 (5%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 I+ ++ + V K + R ++ +I+ I ++ E Sbjct: 462 IKNLIKFLIIPTAVDKKNLNRKKFKRSNKIFYIFSQIILYNMKQLITARNYTINFFGVIE 521 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 +++ + + K + I +S+ + M R ++ +M F G KV +GRL+ Sbjct: 522 ENINADILLKRILLTMDITKSLKWLILN-------MVRKLEKSMSFF--GFKVRFAGRLS 572 Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 + ++R + +G + + +IDY YG CGIKV++ Sbjct: 573 SSIMARVDVIQKGLISTNNMNVYIDYAKDSIVFKYGKCGIKVWLVRN 619 >gi|223947579|gb|ACN27873.1| unknown [Zea mays] Length = 127 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97 E L L + G + + + T II+ + R ++G+KG I ++ + N + Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132 + L +V + A A+S+ +L + RR Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117 >gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens] Length = 117 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G KV+ASG+L G + +++ +++G + ++ G GIK Sbjct: 1 MESGAKGCKVMASGKLRG-QRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQGVLGIK 59 Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224 V + D T + + Sbjct: 60 VKIM-----LPWDPTGKTGPKKPLP 79 >gi|84508566|ref|YP_448614.1| ribosomal protein S3 [Fucus vesiculosus] gi|39653289|gb|AAR29308.1| ribosomal protein S3 [Fucus vesiculosus] Length = 273 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 125 ERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181 +R F R +K++ Q+ ++ G+K+ GR SR Y G++PL L + Sbjct: 191 KRHYEFLRYLKQSFQALQKYKKIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSK 250 Query: 182 IDYGTAVAETAYGSCGIKVYVS 203 I +T YG G+K+++ Sbjct: 251 IQARYKQTQTGYGGVGLKIWIC 272 >gi|11467603|ref|NP_043749.1| ribosomal protein S3 [Allomyces macrogynus] gi|1236433|gb|AAC49250.1| ribosomal protein S3 [Allomyces macrogynus] Length = 241 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%) Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193 MK R G+++ G +S+ G + + + ID+G A + TA Sbjct: 159 MKNPEILDSRHVITGIRIEIKGITGKMTMSKKVIKTFGTLRFNSSDSIIDFGEASSMTAR 218 Query: 194 GSCGIKVYVSLR 205 G G+KV+++ + Sbjct: 219 GIIGVKVWIAYK 230 >gi|292559452|ref|YP_003540820.1| ribosomal protein S3 [Hartmannella vermiformis] gi|290775705|gb|ADD62204.1| ribosomal protein S3 [Hartmannella vermiformis] Length = 346 Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRA 137 I ++ L ++ + + + + + I++ +A++L ++ + M ++ Sbjct: 206 NHLISSLKNNLFSLVGIKPSVVIFGCENKNVTSAFISRFLARKLAQKYKWAELMSSLRKE 265 Query: 138 VQSAMR--FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195 + G K+ GR S + GRV T+ A IDY ++ GS Sbjct: 266 LNYMTDTEKFLYGYKIQFHGRFTRRSRSESVSTGYGRVSTSTVSALIDYASSSLTLRNGS 325 Query: 196 CGIKVYVSL 204 +KV++ Sbjct: 326 GSVKVWLYR 334 Score = 36.5 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 18/140 (12%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-----EYGALLHEDLKIREYLQCHLKQAGVAKI 55 MG +NP+ RL + TW W A Y + I+ YL + V Sbjct: 1 MGHLVNPVGVRLNYSLTWADSWNATNRVHYFNHYSNSIL----IKTYLHYFFSREYVENY 56 Query: 56 LIERTHKN---------CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV 106 I +H + + +Y R I + K+L + + L+ V Sbjct: 57 GIFFSHFSIFWNSNRFLIEVNLYDGRVEDWIETCVNLFSQDLKRLISYSLRSFRLNSKNV 116 Query: 107 PKPEINATLIAQSIAQQLER 126 + + L + Sbjct: 117 EFARSIDHTFFRFVVSLLLK 136 >gi|301500903|ref|YP_003795315.1| ribosomal protein S3 [Chromera velia] gi|300069449|gb|ADJ66557.1| ribosomal protein S3 [Chromera velia] Length = 1024 Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 72/230 (31%), Gaps = 36/230 (15%) Query: 7 PILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREY-LQCHLKQAGVAKILIERTHKN 63 P+ FR+ R F R Y A L +R++ + ++L + + Sbjct: 789 PLAFRMPTTLVQYKMKRRFKRRYFYKARLKARENVRKFRINTPSLNFRTIQLLDQHFWEY 848 Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN---------EVPKPEINAT 114 + + P L R + S + I + + Sbjct: 849 IMLNMNQIGPKLETWAVKLRGTLARTQWSRIIRRFIQWKFYMEYKFKTNIFIKISHLKTK 908 Query: 115 LIA-------QSIAQQLERRVVFRRA----------MKRAVQSAMRFGADGVK---VIAS 154 + + L R+ +RR +RA +A G + + S Sbjct: 909 MSFLHPVAINHEVGFTLRNRMSYRRVGRELQIQVNEQRRAYNAAAGVGLAIMSDILIKIS 968 Query: 155 GRL-NGAELSRTECYL---EGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200 GRL A+ S+ +G +P TL I Y + +T G G+KV Sbjct: 969 GRLSKKADRSKLTKLAVGFKGNIPKNTLTDQIGYASLPWKTKQGILGVKV 1018 >gi|71025934|ref|XP_762674.1| ribosomal protein S3 [Theileria parva strain Muguga] gi|68349623|gb|EAN30391.1| ribosomal protein S3, putative [Theileria parva] Length = 232 Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 18/188 (9%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKIL-IERTHKNCRIIVYSARPGLIIGKKGTD 83 + + L Y+ + I I K + +++ + I K Sbjct: 55 KYKNFSNKLL-------YINSNYYDFFSVHISLIFYNLKKNKALLFLYK---NIIKLSNY 104 Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR-RAMK------R 136 I K +N + + + ++ + N + SI +E+ F+ R + + Sbjct: 105 INYFIKFNLYASNYFVFIHMKKLKYYKNNIYYVITSIKNFIEKNKNFKVRIIYFINSLFK 164 Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 + + + G K + SG L ++ Y G L + +++ Y +T G Sbjct: 165 SDKYNRKINIIGAKCLYSGCLYKNSKKKSFKYARGNTSLSFVMSNVVYAKKSVKTDNGMV 224 Query: 197 GIKVYVSL 204 GIKV++ Sbjct: 225 GIKVWLYR 232 >gi|118724933|gb|ABL11056.1| ribosomal protein S3 [Codium setchellii] Length = 27 Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ + Sbjct: 1 IDYSFQTAKTIYGILGIKIWIFQK 24 >gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans] Length = 143 Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 A+ +++ + +G + Q ++ +ID G GIKV + L Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 47 >gi|302829833|ref|XP_002946483.1| hypothetical protein VOLCADRAFT_86826 [Volvox carteri f. nagariensis] gi|300268229|gb|EFJ52410.1| hypothetical protein VOLCADRAFT_86826 [Volvox carteri f. nagariensis] Length = 167 Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 9/135 (6%) Query: 1 MGQKINP-ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59 MG+ I P I RL VN ++S WF Y +L D + + + +++A + + Sbjct: 1 MGKHILPAIANRLRVNRGFDSAWFTGPQHYAKMLQRDWLLTKNVWSFVQRASRSAPRTNK 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVP--------KPEI 111 + KK ++ ++ N + + P Sbjct: 61 EDPAALAAQAADPSRPRYPKKPQPRQQDAREFPNFRPARVFTQHMPYKSIVSAFAYHPPK 120 Query: 112 NATLIAQSIAQQLER 126 +++ A+ Q ER Sbjct: 121 DSSPQAKYGLFQAER 135 >gi|114590697|ref|XP_001140270.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114590699|ref|XP_001140356.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114590701|ref|XP_001140517.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes] gi|114590703|ref|XP_001140601.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes] Length = 117 Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199 M GA G KV+ASG+L G + +++ +++G + + ++ G GIK Sbjct: 1 MESGAKGCKVVASGKLRG-QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIK 59 Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224 V D T + + Sbjct: 60 VKFM-----LPWDPTGKTGPKKPLP 79 >gi|294662992|ref|YP_492621.2| ribosomal protein S3 [Dictyostelium citrinum] gi|187479917|gb|ACD12717.1| ribosomal protein S3 [Dictyostelium citrinum] Length = 1775 Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 60/168 (35%), Gaps = 8/168 (4%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI+E ++ L + K I++ + +Y + + + + ++ + Sbjct: 1599 KIKEIIKIFLYPLLINKRQIQKVRLRKKNKIYLLMAQIFLYNVKQLVTSVNYSINFFGIT 1658 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 ++ V + + K+ ++S G K+ SGR+ Sbjct: 1659 GSSITAEYVLRRLRERLMTCHKH-----GGWFLTSIQKKLMRS---KHVVGFKLKFSGRI 1710 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 G +++ +G + + +ID+ +G CG+K+++ Sbjct: 1711 TGNSMAQKNIIKKGIIGNSNMNVYIDFAQDNIVRKHGKCGLKLWIVRN 1758 >gi|118724741|gb|ABL10928.1| ribosomal protein S3 [Codium contractum] gi|118724744|gb|ABL10930.1| ribosomal protein S3 [Codium contractum] gi|118724831|gb|ABL10988.1| ribosomal protein S3 [Codium geppiorum] gi|118724852|gb|ABL11002.1| ribosomal protein S3 [Codium intricatum] gi|118724855|gb|ABL11004.1| ribosomal protein S3 [Codium intricatum] gi|118724873|gb|ABL11016.1| ribosomal protein S3 [Codium latum] gi|118724876|gb|ABL11018.1| ribosomal protein S3 [Codium cf. latum C51] gi|118724930|gb|ABL11054.1| ribosomal protein S3 [Codium saccatum] gi|118724948|gb|ABL11066.1| ribosomal protein S3 [Codium subtubulosum] gi|118724951|gb|ABL11068.1| ribosomal protein S3 [Codium subtubulosum] Length = 25 Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ + Sbjct: 1 IDYTFRTAKTIYGILGIKIWIFQK 24 >gi|84508606|ref|YP_448653.1| ribosomal protein S3 [Desmarestia viridis] gi|45925638|gb|AAS79039.1| ribosomal protein S3 [Desmarestia viridis] Length = 286 Score = 42.3 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 9/153 (5%) Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 T + R+ Y+ K+ + + ++ V K + +AT +++ Sbjct: 120 TIRINRLKTYTRSIPKSARKQMAYYARSAHQAKYDYARTGMQLLSLVIKNKASATSLSRF 179 Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLE 170 I Q + R +R +K+A + ++ GVK+ GR S+ Y Sbjct: 180 IIQNISSRQRRKRHYEFLGYLKQAFTALQKYKKIQGVKIQIKGRFTHKAKGRSKVWKYQM 239 Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203 G++PL + I +T YGS G+KV++ Sbjct: 240 GQMPLSQISMPIQAEYMQTQTGYGSVGLKVWIC 272 >gi|118724717|gb|ABL10912.1| ribosomal protein S3 [Codium barbatum] gi|118724720|gb|ABL10914.1| ribosomal protein S3 [Codium barbatum] Length = 25 Score = 42.3 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ + Sbjct: 1 IDYTFQTAKTIYGILGIKIWIFQK 24 >gi|23464612|ref|NP_696980.1| Orf269 [Monosiga brevicollis ATCC 50154] gi|23344075|gb|AAN28351.1| Orf269 [Monosiga brevicollis] Length = 269 Score = 42.3 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR--GSEYGA----LLHEDLKIREYLQCHLKQAGVAK 54 M +KINP FRLG W S + Y LLH DL IR+Y++ K + Sbjct: 1 MAKKINPNRFRLGSKFLWWSISYLNLQNKGYRKIGRELLHNDLLIRKYIENVNKSFNILT 60 Query: 55 ILIERTHK 62 I + K Sbjct: 61 SDIVISRK 68 >gi|118724768|gb|ABL10946.1| ribosomal protein S3 [Codium cf. dimorphum C29] gi|118724771|gb|ABL10948.1| ribosomal protein S3 [Codium cf. dimorphum C77] Length = 25 Score = 41.9 bits (97), Expect = 0.065, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY A+T YG GIK+++ + Sbjct: 1 IDYTFKTAKTIYGVLGIKIWIFQK 24 >gi|187764095|ref|YP_001876544.1| ribosomal protein S3 [Dictyostelium fasciculatum] gi|160688803|gb|ABX45218.1| ribosomal protein S3 [Dictyostelium fasciculatum] Length = 983 Score = 41.9 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 10/104 (9%) Query: 110 EINATLIAQSIAQQLERRVVFRR--------AMKRAVQSAMRFGADGVKVIASGRLNGAE 161 I+ + A+++ ++L +R+ RR M+R ++ + G KV +GRL+ + Sbjct: 865 MISENITAETLLRRLVQRMDIRRRKYIKIAIGMRRKLERSK--NFLGFKVKFAGRLSPSI 922 Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 ++ +G + L ++DY YG CGIKV+++ Sbjct: 923 MASQTIIQKGIIGTGRLNVYLDYAQGSVMFKYGKCGIKVWLARN 966 >gi|187764094|ref|YP_001876543.1| Mp26-like protein [Dictyostelium fasciculatum] gi|160688802|gb|ABX45217.1| Mp26-like protein [Dictyostelium fasciculatum] Length = 843 Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKI 55 MG +NPIL R+GV W S ++R + + ED I Y++ K+ Sbjct: 1 MGHVVNPILLRIGVVNPWISASYSRKNNKRVKYIIEDFLIYNYIRNFFFNKVYLKV 56 >gi|159478230|ref|XP_001697207.1| hypothetical protein CHLREDRAFT_192429 [Chlamydomonas reinhardtii] gi|158274681|gb|EDP00462.1| predicted protein [Chlamydomonas reinhardtii] Length = 130 Score = 41.5 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE 41 I RL +N ++S WFA +Y +L D ++ + Sbjct: 9 IANRLRLNRGFDSAWFAEPGQYAKMLQRDWQVTK 42 >gi|255569250|ref|XP_002525593.1| chloroplast 30S ribosomal protein S7, putative [Ricinus communis] gi|223535114|gb|EEF36795.1| chloroplast 30S ribosomal protein S7, putative [Ricinus communis] Length = 89 Score = 41.1 bits (95), Expect = 0.099, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%) Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176 M++A++ G++V +GRL+G E++R E +GR Sbjct: 1 MRKAIELTEHADTKGIQVQIAGRLDGKEIARVEWIRKGRTKNN 43 >gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis] Length = 125 Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 7/67 (10%) Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217 +++ +++G + + ++D G GIKV + D + Sbjct: 17 KPRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM-----LPKDPSGKI 71 Query: 218 AEHRVVE 224 + + Sbjct: 72 GPKKPLP 78 >gi|209892899|ref|YP_002290872.1| rps3 [Babesia bovis T2Bo] gi|154795908|gb|EDO05092.1| rps3 [Babesia bovis] Length = 237 Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 12/188 (6%) Query: 29 YGALLHEDLKIREYLQCHLKQAGVAK-----ILIERTHKNCRIIVYSARPGLIIGKKGTD 83 Y L + R++L + K + + + L + Sbjct: 50 YKKTLKKIRINRKFLYFTCSYTDINNICLNICFYGLFGKKHKSSIIPSYMALYKFTSYLN 109 Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143 N I + + V N I S+ + + + + Sbjct: 110 YFLHHNLNVYNRNLFIWVLIPCVVNTGRNKFYIMNSLKYCILKNTNHYSKIISLCNKILT 169 Query: 144 FGAD------GVKVIASGRL-NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196 + G+KV SG G E RT Y +G V + +++ +I+Y + T G+ Sbjct: 170 YKFKNRISIHGIKVKYSGCTHKGGEKKRTFAYSKGDVSICSVKENIEYINSSINTYKGTI 229 Query: 197 GIKVYVSL 204 GIK ++ L Sbjct: 230 GIKCWLVL 237 >gi|118724840|gb|ABL10994.1| ribosomal protein S3 [Codium hubbsii] Length = 25 Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY +A+T YG GIK+++ + Sbjct: 1 IDYTFHIAKTIYGILGIKIWIFQK 24 >gi|118724735|gb|ABL10924.1| ribosomal protein S3 [Codium capitulatum] gi|118724738|gb|ABL10926.1| ribosomal protein S3 [Codium capitulatum] gi|118724843|gb|ABL10996.1| ribosomal protein S3 [Codium hubbsii] gi|118724939|gb|ABL11060.1| ribosomal protein S3 [Codium spongiosum] gi|118724942|gb|ABL11062.1| ribosomal protein S3 [Codium spongiosum] Length = 25 Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY +A+T YG GIK+++ + Sbjct: 1 IDYTFQIAKTIYGILGIKIWIFQK 24 >gi|298243655|ref|ZP_06967462.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] gi|297556709|gb|EFH90573.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM 44963] Length = 596 Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 21/190 (11%) Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84 +G LHE I++ L + A+ + RT N +S K + Sbjct: 291 ERKAFGKFLHEFGMIKKKLARMAAETYAAESEVFRTAANISNAQHSGGDNTDAIFKAVED 350 Query: 85 EKIRKKLSNMTNSEI----------------HLSVNEVPKPEINATLI-----AQSIAQQ 123 I L+ + SE+ + + K +A + I + Sbjct: 351 YAIEASLAKVHGSEVLAMVVDEGVQIFGGYGFMKEYPIEKAYRDARIQRIFEGTNEINRM 410 Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183 + +FRRAMK V + ++ A+ NGA+ + E L+ + Sbjct: 411 VASGTLFRRAMKGQVSLMTIYPQVEGRIKANEPSNGADENVPAELREAVNTLERSKDATI 470 Query: 184 YGTAVAETAY 193 Y Y Sbjct: 471 YAAVNVAMKY 480 >gi|198422965|ref|XP_002129932.1| PREDICTED: similar to PRP4 pre-mRNA processing factor 4 homolog [Ciona intestinalis] Length = 512 Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%) Query: 49 QAGVAKILIERTHKNCRIIVYSAR------PGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102 + G + I+ K I + I K+ +I ++ + ++ Sbjct: 31 KVGSKQEAIDMGIKAGNINISDPSETMEMTMEERINKRQAEILAEFERKKKIRQIQVTTD 90 Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162 +E+ K L + R R ++ ++ + +A+ R A+L Sbjct: 91 DDEIKKLLRERNLPVTLFGEGPADR---RERLRESIAEIGPIKNKNAEEMAAKRKEEAQL 147 Query: 163 SRTECYLEGRVPLQTLRAHI 182 +RT Y EG L+T R I Sbjct: 148 TRTTWYHEGSDSLKTARLWI 167 >gi|118724885|gb|ABL11024.1| ribosomal protein S3 [Codium lucasii] Length = 25 Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY +A+T YG GIK+++ + Sbjct: 1 IDYTCQIAKTIYGILGIKIWIFQK 24 >gi|118724897|gb|ABL11032.1| ribosomal protein S3 [Codium minus] Length = 38 Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY +A+T YG GIK+++ + Sbjct: 1 IDYSFKIAKTIYGILGIKIWIFQK 24 >gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays] Length = 80 Score = 39.6 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 6/51 (11%) Query: 166 ECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210 + +G + Q + +ID G GIKV + L + +V Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 51 >gi|118724708|gb|ABL10906.1| ribosomal protein S3 [Codium arabicum] Length = 25 Score = 39.6 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 17/24 (70%) Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205 IDY + +A+T YG GIK+++ + Sbjct: 1 IDYTSQIAKTIYGILGIKIWIFQK 24 >gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera] Length = 576 Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 9/81 (11%) Query: 133 AMKRAVQSAMRFGADGVKV-IASGRLNG-----AELSRTECYLEGR--VPLQTLRAHIDY 184 + RA Q+ G G K+ + L G A+ +++ + +G Q ++ +ID Sbjct: 44 IIIRATQTHNVLGEKGKKIKELTSLLGGLAMLCAQRAKSMKFKDGYLISSGQPVKDYIDL 103 Query: 185 GTAVAETAYGSCGIKVYVSLR 205 G GIKV + Sbjct: 104 AVRHVL-RQGVLGIKVKIMFN 123 >gi|73982323|ref|XP_851416.1| PREDICTED: similar to 40S ribosomal protein S3 [Canis familiaris] Length = 161 Score = 39.2 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 46/168 (27%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+L L + G +++ + T II+ + R ++G+K + + Sbjct: 23 EFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEKAGG-----------CGNGLL 71 Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 FRR + GA G + + SG+L G Sbjct: 72 W----------------------------FRRGG----LAVQESGAKGYEAMVSGKLQG- 98 Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206 + +++ +++ + + ++D G G K Sbjct: 99 QRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSKCRSCFPG 146 >gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera] Length = 458 Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 12/124 (9%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 +G D+ + + ++ E+ + A L ++ R + VQ Sbjct: 86 RGVDLSASNMEKYTIWVLQLRDFCTEI-------IIHATQTQNVLCKKGKKIRELTSVVQ 138 Query: 140 S--AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195 M G G +VI SG+L + +++ + +G + Q ++ +ID G Sbjct: 139 KRFVMESGTKGCEVIMSGKLC-VQCAKSIKFKDGYLIFSGQLVKDYIDSTVRHVLLKQGI 197 Query: 196 CGIK 199 IK Sbjct: 198 LSIK 201 Score = 38.1 bits (87), Expect = 0.98, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQS 119 + II+++ + ++GKKG I ++ + + + L + A A+S Sbjct: 328 HMEIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAES 387 Query: 120 IAQQLERRVVFRRAMKRAV 138 + +L +V RRA + Sbjct: 388 LRFKLLGGLVVRRAGYGVL 406 >gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum] Length = 79 Score = 38.8 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 6/66 (9%) Query: 167 CYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDSDSTIPAAEH 220 + +G + Q + +ID G GIKV + L + ++ + Sbjct: 3 KFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTI 62 Query: 221 RVVEKD 226 +++ Sbjct: 63 HPPKEE 68 >gi|209427656|ref|YP_002274330.1| ribosomal protein [Blastocladiella emersonii] gi|82492284|gb|ABB78023.1| ribosomal protein [Blastocladiella emersonii] Length = 233 Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%) Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 G+++ G +S+ G + + + ID+G A G G+KV++ Sbjct: 169 GIRIEIKGITGKMTMSKKVIKTFGTLRFNSSDSVIDFGEARNFNKKGIIGVKVWI 223 >gi|212995900|ref|YP_002317404.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii] Length = 235 Score = 38.4 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 14/144 (9%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV- 138 I + + LSN+ + L + ++ P +N+ ++A I + L+ F R + + Sbjct: 85 NANTINALGEVLSNVWGQAVELRLVKLHYPYLNSDILAAFIMKNLDTDR-FERVINKIFG 143 Query: 139 --------QSAMRFGADGVKVIASGRL---NGAELSRTECYLEGRVPLQTLRAHIDYGTA 187 +S + G+K+ +GRL + G T R I++G Sbjct: 144 ITTPVVSGESNLPSHIIGIKIRLAGRLVTEPSRPRMTVQSAQIGSFKNST-RTIIEFGQC 202 Query: 188 VAETAYGSCGIKVYVSLRDEVSDS 211 + G+ ++V++S R Sbjct: 203 SSVNKKGALTVQVWISQRSTTPTH 226 >gi|326427414|gb|EGD72984.1| hypothetical protein PTSG_13218 [Salpingoeca sp. ATCC 50818] Length = 910 Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 44/142 (30%), Gaps = 3/142 (2%) Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI E + + + +++ + R ++ G K + ++ N+ Sbjct: 132 KINEDFEEFTDRLHSQMSDFDADQFAAVVMIQAFRDPKLVAFAGDRRPKNVAEAFDVINN 191 Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK---VIAS 154 + +V + + + + + +R +R + Q + + Sbjct: 192 YYVANPFKVKRTQASTSSNFPPFRSKRAKRHQHQRPQHQRPQHSRPQHQRSFRSLACGRC 251 Query: 155 GRLNGAELSRTECYLEGRVPLQ 176 GR N +E + LQ Sbjct: 252 GRFNHSEDKCHAKFHANGKHLQ 273 >gi|302748541|gb|ADL63751.1| ribosomal protein S3 [Anisophyllea sp. Boyce 758] Length = 448 Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAV 138 +++K+R LSN T + + ++ +A+ IAQ I+ QL + FR + + + Sbjct: 370 EVKKMRSLLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDI 429 Query: 139 QSAMRFGADGVKVIASGRL 157 M G +G+++ SGR Sbjct: 430 PLVMNKGVEGIRICCSGRS 448 >gi|273068646|gb|ACZ97564.1| ribosomal protein 3 [Kernia pachypleura] Length = 485 Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 38 KIREYL----QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93 KI Y+ LK+ K+ R R VY+ + ++ + K+ L Sbjct: 200 KIMNYVIYPLMNILKRIFFNKLKFIRKINIIRNHVYTYKINKFKFEEIYFLYKLNNILEK 259 Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF-RRAMKRAVQSAMRFGADGVK 150 + N +I ++ + N + +++A +L +R F R + + A + + Sbjct: 260 ILNKKIEYNIINLKSLVYNTDIFTKALALKLRKRKFFVMRGINSIINRARLPKVNTIM 317 >gi|45477034|sp|P92511|M690_ARATH RecName: Full=Uncharacterized ribosomal S3-like protein AtMg00690, mitochondrial; AltName: Full=ORF240a Length = 240 Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 1 MGQKINPILFRLGVNCTWNSRWFA 24 M +K NPIL RLG N + +S WF+ Sbjct: 46 MARKGNPILVRLGKNRSSDSSWFS 69 >gi|312623415|ref|YP_004025028.1| glycoside hydrolase family 43 [Caldicellulosiruptor kronotskyensis 2002] gi|312203882|gb|ADQ47209.1| glycoside hydrolase family 43 [Caldicellulosiruptor kronotskyensis 2002] Length = 1338 Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 YL+ +L Q + L + K ++ +Y K ++ + ++ + Sbjct: 722 NYLKVYLDQTEI--FLDNSSEKKYQVSIYVNSLPKNKKIKQVELLLNHPEWIDVAGIKKE 779 Query: 101 LSVNE---VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157 + E V + A SI+ +K+ + V + ++ Sbjct: 780 NKLLENAIVKVVKREANHTTISISN-----------IKKELIDKDNKWQKIVSIQLKRKI 828 Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192 +E ++ E LQT + I YG+ A T Sbjct: 829 KPSESNKGE-ISIKSFVLQTEKEKISYGSDAAVTK 862 >gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group] Length = 85 Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 2/44 (4%) Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204 +++ + +G + + +ID G GIKV + L Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIML 44 >gi|60117122|ref|YP_209585.1| ribosomal protein S3 [Polysphondylium pallidum] gi|51339686|gb|AAU00600.1| ribosomal protein S3 [Polysphondylium pallidum] Length = 389 Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 4/104 (3%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKIL--- 56 MG +NP++ RLGV W + ++R + E+ + Y++ K+L Sbjct: 1 MGHVVNPVVLRLGVITPWIAASYSRKNNKRIQYTIENFLVYNYIRKFFNNKIYLKVLSKI 60 Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 +R K + ++S P + I + ++ + Sbjct: 61 RKRKKKYLKNFLFSNFPYIFSHLSIMRITNNYQLNLFFYDTSLQ 104 >gi|224150034|ref|XP_002199784.1| PREDICTED: similar to rCG40478, partial [Taeniopygia guttata] Length = 116 Score = 37.3 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100 E+L L + G + + + T II+ + R ++G+KG I ++ + Sbjct: 36 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFP-- 93 Query: 101 LSVNEVPKPE 110 EV +P+ Sbjct: 94 EGSVEVKRPQ 103 >gi|1911517|gb|AAB50696.1| ribosomal 30S protein TS3 {N-terminal} [Thermus thermophilus, Peptide Partial, 15 aa] Length = 15 Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 11/15 (73%) Query: 2 GQKINPILFRLGVNC 16 G KI+PI FRLG+ Sbjct: 1 GNKIHPIGFRLGITR 15 >gi|146296118|ref|YP_001179889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409694|gb|ABP66698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 340 Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 4/127 (3%) Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII--VYSARPGLIIGKKGTDI 84 +Y L D+++R Y +L++ G + R + RII +Y I I Sbjct: 119 RKYIEELKRDMEMRNYFNQYLRKIGSDENHFYRDLQKTRIINKLYKYVTERITLSDSEVI 178 Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINAT--LIAQSIAQQLERRVVFRRAMKRAVQSAM 142 + S ++ V E +A +A I +L+R F + +K+ + Sbjct: 179 KYYNANKSQFRKIKVMDIFLRVENAEEDAKKRKVANEIISELKRGEDFEKLVKKYSEVES 238 Query: 143 RFGADGV 149 G G+ Sbjct: 239 LDGKKGI 245 >gi|200004052|ref|YP_002221386.1| ribosomal protein S3 [Blastocystis sp. NandII] gi|198385474|gb|ACH86067.1| ribosomal protein S3 [Blastocystis sp. NandII] Length = 345 Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 11/104 (10%) Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQA------GVA 53 M QK++PILF NS+W+ + +++ L+EDL+IRE + K + Sbjct: 1 MSQKVSPILF--NNTIYNNSKWYNKINNKFA--LNEDLQIREIINILFKNNVNYQYLFID 56 Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97 KI+I + + +I +Y + K +K + + Sbjct: 57 KIVIYKYYSKIKIYIYFFCNLNYLKKNLILRKKNYLNIIYIYYK 100 >gi|320593513|gb|EFX05922.1| hypothetical protein CMQ_3991 [Grosmannia clavigera kw1407] Length = 277 Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 35/118 (29%), Gaps = 5/118 (4%) Query: 18 WNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLI 76 W WF R + L +D IR + + + + P Sbjct: 160 WEDFWFCMRVKSFSPGLAKDEAIRSHFRKREMEKYYTPSSRSSEDVWRSRTIDEVLPPDA 219 Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134 + K S + + + KP + A+ I LERR + R+ M Sbjct: 220 VFNKSFKAVLSGGSSSAPDGT----NTDPSTKPPASEQRDAEQIRADLERRRLIRQQM 273 >gi|145543859|ref|XP_001457615.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124425432|emb|CAK90218.1| unnamed protein product [Paramecium tetraurelia] Length = 707 Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 4/106 (3%) Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPG---LIIGKKGTDI 84 +Y ED +I + +L+Q I I + +I+ + + + +K Sbjct: 269 QYPDYYIEDSEIAQIFADYLEQTNCKNIKIRLEKRMKEVIIQTTQTETILKMFQRKNIKS 328 Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA-QSIAQQLERRVV 129 K + +N+ + + ++ TL + QL+++ Sbjct: 329 IKNLIQKCKSSNNLEMIQDSYPKIKQLQTTLQQLEQFKNQLQKKQQ 374 >gi|146749412|gb|ABQ44358.1| ribosomal protein S3 [Methanohalophilus portucalensis FDF-1] Length = 151 Score = 36.5 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 11/27 (40%) Query: 185 GTAVAETAYGSCGIKVYVSLRDEVSDS 211 G AVA G+ G KV + V Sbjct: 2 GLAVAVKKLGTIGCKVRIIHPGAVLPD 28 >gi|328953795|ref|YP_004371129.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] gi|328454119|gb|AEB09948.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Desulfobacca acetoxidans DSM 11109] Length = 281 Score = 36.5 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%) Query: 21 RWFARGSEYGALLHEDLKIREYLQCHLKQ 49 +W+ + Y L DL+ R +++ L Sbjct: 13 KWYLQAKNYADDLLSDLRRRRFIKKFLSD 41 >gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei] Length = 82 Score = 36.5 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Query: 160 AELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205 A+ +++ + +G + + ++ T A+ G GIKV + L Sbjct: 5 AQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQGVLGIKVKIMLP 52 >gi|328541234|gb|AEB21841.1| ribosomal protein S3 [Telaranea herzogii] Length = 324 Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKVIA 153 + G+++ Sbjct: 310 QIKKCPYVKGIRIGC 324 >gi|66359472|ref|XP_626914.1| centrin like EF hand protein [Cryptosporidium parvum Iowa II] gi|46228080|gb|EAK88979.1| centrin like EF hand protein [Cryptosporidium parvum Iowa II] Length = 471 Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 3/110 (2%) Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVA--KILIER-THKNCRIIVYSARPGLIIGK 79 F +G LL E +I +++ L ++ K I T + I+ I Sbjct: 316 FEDRQLFGKLLMELYEIESFIKRSLVESFGMEWKAKINMNTDTKYKTIIEFYNLVKKIIG 375 Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129 K T+ E + EV N + Q++ LE R+ Sbjct: 376 KLTESENYEIITFKRNKYVVIEKKVEVFFSIFNNIINQQNLINNLENRIK 425 >gi|7524995|ref|NP_050093.1| ORF425 [Dictyostelium discoideum] gi|1088429|dbj|BAA04739.1| unnamed protein product [Dictyostelium discoideum] gi|4958898|dbj|BAA78075.1| ORF425 [Dictyostelium discoideum] Length = 425 Score = 36.1 bits (82), Expect = 4.1, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 8/134 (5%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALL-HEDLKIREYLQCHLKQAGVAKILIER 59 MG INP ++RLG W S F R + + +ED I + + + K++ + Sbjct: 1 MGHIINPNIYRLGKMVPWVSSGFKRKKNERSKVANEDFLIYNFTRNFFYKKVYKKVVAKV 60 Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119 ++ +K + + ++ I L Sbjct: 61 KKAKLKVRNSRISRKSKKKRKFGRTSLLNHWIIKYSHLTITRFNK-------TFQLNIFF 113 Query: 120 IAQQLERRVVFRRA 133 ++L++R + R A Sbjct: 114 FDRELQKRYILRTA 127 >gi|87043008|ref|YP_492622.1| Mp26-like protein [Dictyostelium citrinum] gi|84682108|gb|ABC60373.1| Mp26-like protein [Dictyostelium citrinum] Length = 432 Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALL-HEDLKIREYLQCHL 47 MG INP ++RLG W S F R + + +ED I + + Sbjct: 1 MGHIINPNIYRLGKIVPWVSSGFKRNKNERSKVANEDFLIYNFTRNFF 48 >gi|155199144|gb|ABT17135.1| ribosomal protein S3 [Codium fragile subsp. atlanticum] gi|155199147|gb|ABT17137.1| ribosomal protein S3 [Codium fragile subsp. tomentosoides] gi|155199150|gb|ABT17139.1| ribosomal protein S3 [Codium fragile] gi|155199153|gb|ABT17141.1| ribosomal protein S3 [Codium fragile] gi|155199156|gb|ABT17143.1| ribosomal protein S3 [Codium fragile] gi|155199159|gb|ABT17145.1| ribosomal protein S3 [Codium fragile] gi|155199162|gb|ABT17147.1| ribosomal protein S3 [Codium fragile] gi|155199165|gb|ABT17149.1| ribosomal protein S3 [Codium fragile] gi|155199168|gb|ABT17151.1| ribosomal protein S3 [Codium fragile] gi|155199171|gb|ABT17153.1| ribosomal protein S3 [Codium fragile] Length = 19 Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 188 VAETAYGSCGIKVYVSLR 205 A+T YG GIK+++ Sbjct: 1 TAKTIYGILGIKIWIFQP 18 >gi|328541212|gb|AEB21830.1| ribosomal protein S3 [Lembidium nutans] Length = 323 Score = 35.7 bits (81), Expect = 5.4, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 249 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 308 Query: 140 SAMRF-GADGVKVIA 153 + G+++ Sbjct: 309 QIKKCPYVKGIRIGC 323 >gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans] gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans] Length = 262 Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 61/190 (32%), Gaps = 19/190 (10%) Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98 I+++ + + + K+ T K + + + ++ KI K +N Sbjct: 79 IKKFFKKNCRFHYHQKLHCSFTKKLKNKLTLTKNIISHLFFINSNKLKILYKNYKSSNIS 138 Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158 + + + FR + ++ + G G + G + Sbjct: 139 TMTQSSRMKEAFNYTN-------------KSFRSIIFNTLRFLINSGVRGCMIKLKG-VY 184 Query: 159 GAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRD---EVSDSDS 213 ++ ++T + G + ++ + ID + G+ GI + + ++ + Sbjct: 185 RSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYLNKKRGTLGINIKIMKKERKNYFLNKKH 244 Query: 214 TIPAAEHRVV 223 +P R Sbjct: 245 LVPGKIRRKS 254 >gi|67923721|ref|ZP_00517187.1| hypothetical protein CwatDRAFT_2608 [Crocosphaera watsonii WH 8501] gi|67854429|gb|EAM49722.1| hypothetical protein CwatDRAFT_2608 [Crocosphaera watsonii WH 8501] Length = 119 Score = 35.4 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 19 NSRWFARGSEYGALLHEDLKIRE 41 +S W+A Y L ED K+R+ Sbjct: 65 HSNWYADEESYAKRLKEDRKLRK 87 >gi|300114868|ref|YP_003761443.1| outer membrane protein assembly complex protein YaeT [Nitrosococcus watsonii C-113] gi|299540805|gb|ADJ29122.1| outer membrane protein assembly complex, YaeT protein [Nitrosococcus watsonii C-113] Length = 766 Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 6/63 (9%) Query: 12 LGVNCTWNSRW---FARGSEYG-ALLHEDLK-IREY-LQCHLKQAGVAKILIERTHKNCR 65 LG S W F +Y L DL+ +R Y L + + T R Sbjct: 201 LGAFQLHTSNWLSFFTHDDQYSRQKLAADLEALRSYYLDRGYINFNIDSTQVSITPDKRR 260 Query: 66 IIV 68 + + Sbjct: 261 VFI 263 >gi|189461365|ref|ZP_03010150.1| hypothetical protein BACCOP_02020 [Bacteroides coprocola DSM 17136] gi|189431894|gb|EDV00879.1| hypothetical protein BACCOP_02020 [Bacteroides coprocola DSM 17136] Length = 994 Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 24 ARGSEYGALLHEDLKI-------REYLQCHLKQAGVAKILIERTHK---NCRIIVYSARP 73 A EY L+ D+ + R+ + + + I K I ++ R Sbjct: 233 ADRIEYIDSLNLDMDLSSISHNKRKSIARRIVHRRLYSIERSSQEKIYPGIVIYIHETRK 292 Query: 74 ---GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130 ++ + + +K I + E+ K + + IA++++ L + Sbjct: 293 MLLDFVVESNDAILHNLLRKSEKRNEKTILQNSKEIFKNQSDLLSIAEAVSFSLRHKKNL 352 Query: 131 RRAMKR----AVQSAMRFGADGVKVIAS 154 R +K+ ++++ G ++ S Sbjct: 353 RTELKKRNFSSLEALDLIIKRGYELNCS 380 >gi|32423679|gb|AAP81222.1| ribosomal protein S3 [Candidatus Portiera aleyrodidarum] Length = 34 Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 191 TAYGSCGIKVYVSLRDEVS 209 T+YG GIKV+V + + Sbjct: 1 TSYGVIGIKVWVFKGERIG 19 >gi|156095610|ref|XP_001613840.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148802714|gb|EDL44113.1| hypothetical protein, conserved [Plasmodium vivax] Length = 11429 Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 50/127 (39%), Gaps = 4/127 (3%) Query: 21 RWFARGSEYGALLHEDLKIR-EYLQCHLKQA-GVAKILIERTHKNCRIIVYSARPGLIIG 78 WF + L+ EDL+I+ E + + + + + + + +++ +I Sbjct: 5968 NWFIPKIKERKLVKEDLEIKLEEINVYEESDLHCLEKIRKFSCSIKKLLKKYNNTIVIQL 6027 Query: 79 KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV 138 K+ + K+ K + + + L + ++L +++ F R+ ++ + Sbjct: 6028 KRNHSMNKVHIKCIENSKLSKTNFCSNCKSNYVC--LCQKIKKEELRKKMNFIRSQEKRI 6085 Query: 139 QSAMRFG 145 ++ G Sbjct: 6086 EAIRTNG 6092 >gi|315465331|emb|CBQ72566.1| small ribosomal protein subunit 3 [Sporisorium reilianum] Length = 268 Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 10/123 (8%) Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV--FRRAM--KRAVQSAM-RFGAD 147 + E+++ + P +N+++++Q IA FR A+ K ++ Sbjct: 144 QVYQKEVNIIATRLYYPYLNSSILSQYIAHNASSNTFINFREAILTKPSLHKTNLPAHIS 203 Query: 148 GVKVIASGRL---NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYV 202 G+KV SGRL + Y+ G IDY + G+ +KV++ Sbjct: 204 GIKVQVSGRLVTERVIPRITVKSYVIGSFQRSSNNATQIIDYSKFTTKNELGAFTVKVWI 263 Query: 203 SLR 205 R Sbjct: 264 CQR 266 >gi|328541260|gb|AEB21854.1| ribosomal protein S3 [Acromastigum mooreanum] Length = 323 Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKV 151 + G+++ Sbjct: 310 QIKKCPYVKGIRI 322 >gi|297264525|ref|XP_001107256.2| PREDICTED: ankyrin and armadillo repeat-containing protein-like [Macaca mulatta] Length = 1434 Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 12/108 (11%) Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87 ++ L KIR+ A + + + + + ++ + T +++ Sbjct: 399 DFQKNLE---KIRDC----AANAFIEDSGYKEYYSIPVMEFHGKSYYVMYFELETFYQQL 451 Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135 K +EI ++ P +A L +Q +++ F+RAMK Sbjct: 452 YKTQWWGAINEIMNNLRPKRLPLTDAQL-----HEQFKKKFGFKRAMK 494 >gi|328541312|gb|AEB21880.1| ribosomal protein S3 [Lepidozia cupressina] Length = 323 Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139 + ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309 Query: 140 SAMRF-GADGVKV 151 + G+++ Sbjct: 310 QIKKCPYVKGIRI 322 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.313 0.140 0.457 Lambda K H 0.267 0.0430 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,875,989,644 Number of Sequences: 13984884 Number of extensions: 75260429 Number of successful extensions: 225558 Number of sequences better than 10.0: 3992 Number of HSP's better than 10.0 without gapping: 3881 Number of HSP's successfully gapped in prelim test: 111 Number of HSP's that attempted gapping in prelim test: 218120 Number of HSP's gapped (non-prelim): 4385 length of query: 227 length of database: 4,792,584,752 effective HSP length: 134 effective length of query: 93 effective length of database: 2,918,610,296 effective search space: 271430757528 effective search space used: 271430757528 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 79 (35.0 bits)