RPSBLAST alignment of GI: 254780255 and protein with PDBid: 2vqe

>2vqe_C 30S ribosomal protein S3; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} PDB: 1gix_F* 1hnw_C* 1hnx_C* 1hnz_C* 1hr0_C 1ibk_C* 1ibl_C* 1ibm_C 1j5e_C 1jgo_F* 1jgp_F* 1jgq_F* 1ml5_F* 1n32_C* 1n33_C* 1n34_C 1n36_C 1xmo_C* 1xmq_C* 1xnq_C* ... Length = 239

 Score =  216 bits (552), Expect = 3e-57
 Identities = 102/225 (45%), Positives = 143/225 (63%)

Query: 1   MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
           MG KI+PI FRLG+   W SRW+A   +Y  LL ED +IR  L+  L  AG+A++ IER 
Sbjct: 1   MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERA 60

Query: 61  HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
             N  + V+ A+PG++IG+ G  I  +R++L+ +T   + L+V EV  P ++A L+AQ +
Sbjct: 61  ADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRV 120

Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
           A+Q+ERR   RRA+K+AVQ  M  GA G KVI SGR+ GAE +RTE   +GRVPL TLRA
Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRA 180

Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
           +IDYG A+A T YG  G+K Y+ L + +            +  E+
Sbjct: 181 NIDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKARPELPKAEER 225