RPSBLAST alignment of GI: 254780255 and SCOP domain: d2uubc1

Alignment

>d2uubc1 d.52.3.1 (C:2-106) Ribosomal protein S3 N-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 105

 Score =  134 bits (339), Expect = 5e-33
 Identities = 45/105 (42%), Positives = 67/105 (63%)

Query: 2   GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
           G KI+PI FRLG+   W SRW+A   +Y  LL ED +IR  L+  L  AG+A++ IER  
Sbjct: 1   GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60

Query: 62  KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV 106
            N  + V+ A+PG++IG+ G  I  +R++L+ +T   + L+V EV
Sbjct: 61  DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEV 105

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Prokaryotic type KH domain (KH-domain type II)
family: Prokaryotic type KH domain (KH-domain type II)
domain: Ribosomal protein S3 N-terminal domain
species: Thermus thermophilus [TaxId: 274]