HHsearch alignment for GI: 254780256 and conserved domain: pfam00237
>pfam00237 Ribosomal_L22 Ribosomal protein L22p/L17e. This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.
Probab=100.00 E-value=2e-39 Score=253.07 Aligned_cols=105 Identities=48% Similarity=0.632 Sum_probs=103.2
Q ss_pred EECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEE
Q ss_conf 12148750889999999984798699999888658202479999999999999984059982336999999889811420
Q gi|254780256|r 19 AIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKR 98 (131)
Q Consensus 19 A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR 98 (131)
T Consensus 1 A~~r~ir~S~kK~r~v~~~Irg~~v~~A~~~L~~~p~kaa~~i~k~L~sA~aNA~~~~~~d~~~L~I~~~~v~~g~~~KR 80 (105)
T pfam00237 1 AVARYIRISPKKARLVADLIRGKSVEEALAILEFVPKKAAKIILKLLKSAVANAENNKGLDPDNLYIKEIFVDKGPTLKR 80 (105)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCC
T ss_conf 96153614889999999998699199999998319876899999999999998987036885684999999834870557
Q ss_pred EEECCCCCCCCEECCCCEEEEEEEE
Q ss_conf 1025666637201785008999985
Q gi|254780256|r 99 FHCRGRQRIGRIVRPFSRLTVIVRE 123 (131)
Q Consensus 99 ~~prarGRa~~i~k~~sHi~VvL~e 123 (131)
T Consensus 81 ~~prarGRa~~i~k~~~Hi~vvl~e 105 (105)
T pfam00237 81 FRPRARGRATPIRKRTSHITIVLSE 105 (105)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 7857788887753796018999829