HHsearch alignment of GI: 254780256 and MMDB domain: 1i4j_A_

>1i4j_A (A:) 50S ribosomal protein L22; mutant, erythromycin resistance, RNA binding, RNA binding protein; 1.80A {Thermus thermophilus}
Probab=100.00  E-value=7.4e-37  Score=237.60  Aligned_cols=110  Identities=44%  Similarity=0.495  Sum_probs=106.4

Q ss_pred             HEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCC
Q ss_conf             12311214875088999999998479869999988865820247999999999999998405998233699999988981
Q gi|254780256|r   15 NEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSV   94 (131)
Q Consensus        15 ~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~   94 (131)
                      +|++|..+++++||+|+++||++||||++++|++||+|+|+|+|..++|+|+||++||++++|+|+|+|||+++|||+||
T Consensus         1 me~~a~~~~ir~S~kK~~~va~~IrG~~v~~Al~~L~~~~~K~a~~i~k~l~sA~anA~~~~~~d~~~L~I~~~~v~~G~   80 (110)
T 1i4j_A            1 MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGP   80 (110)
T ss_dssp             CCEEEEEEEESSCHHHHHHHHHHHTTCBHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEEEE
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
T ss_conf             92798708762488999999999869919999999645984317999999999999999852998220599999989997


Q ss_pred             EEEEEEECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf             142010256666372017850089999851723
Q gi|254780256|r   95 FMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDE  127 (131)
Q Consensus        95 ~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~  127 (131)
                         +++||||||++++++|+|||+|+|+|.+++
T Consensus        81 ---~~k~rarGr~~~i~k~~~hI~vvl~e~~~~  110 (110)
T 1i4j_A           81 ---AVLPRARGRADIIKKRTSHITVILGEKHGK  110 (110)
T ss_dssp             ---EECSCSSSCCCSCCEEEEEEEEEEEESSCC
T ss_pred             ---CCCCCCCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf             ---078664789886068977789999237789