HHsearch alignment of GI: 254780256 and MMDB domain: 2wwb_I_
>2wwb_I (I:) 60S ribosomal protein L17-A; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Triticum aestivum} PDB: 2wwa_I 2ww9_I 1s1i_N
Probab=100.00 E-value=1.7e-35 Score=229.65 Aligned_cols=118 Identities=28% Similarity=0.243 Sum_probs=111.8
Q ss_pred HHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH--------------------------------HCCCHH
Q ss_conf 421011231121487508899999999847986999998886--------------------------------582024
Q gi|254780256|r 10 RRMGDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLE--------------------------------FSRKRI 57 (131)
Q Consensus 10 ~~~~~~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~--------------------------------f~~kk~ 57 (131)
...++++++|.++++++||+|+++|+++||||+|++|+.||+ |+|+|+
T Consensus 8 ~~~~~~~v~a~~~~~~~S~kk~~~va~~Irg~~v~~A~~~L~~v~~kk~avp~~r~~~g~~~~~~~~~~~~~~~~~pkKa 87 (184)
T 2wwb_I 8 STNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKS 87 (184)
T ss_dssp CCCGGGEEEEEEEEESSCHHHHHHHHHHSCSSCHHHHHHHHHHHHHTSCSCCCSSCCCCSSCCCCSCCSSCCCCCCCTHH
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCCCHHH
T ss_conf 78998128995488724669999999998798499999999998750042036776176563456664188777485789
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCEEEEEEEECCCCC
Q ss_conf 79999999999999984059982336999999889811420102566663720178500899998517233
Q gi|254780256|r 58 AGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDEG 128 (131)
Q Consensus 58 A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~~ 128 (131)
|..|.++|+||.+||++ +|+|+|+|||++||||+|+++||++|||+||++++++++|||+|+|+|.+++.
T Consensus 88 a~~i~k~L~sa~~nA~~-~g~D~~~L~I~~i~v~kg~~~kr~~~rArGR~~~~~~~~~hi~viL~E~~~~~ 157 (184)
T 2wwb_I 88 VKFVQGLLQNAAANAEA-KGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEAV 157 (184)
T ss_dssp HHHHHHHHHHHHHHTTS-SCCCSSCCCEEEEEEECCCCEEEEEEEETTEEEEEEECCEEEEEEEECC----
T ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 99999999999987651-13673243999999888853367671235688860389744899997376445