HHsearch results for GI: 254780256 and protein with PDBid: 2zkr_r
>2zkr_r 60S ribosomal protein L17; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=2e-36 Score=234.19 Aligned_cols=116 Identities=26% Similarity=0.256 Sum_probs=109.3
Q ss_pred HHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC--------------------------------CCHHH
Q ss_conf 2101123112148750889999999984798699999888658--------------------------------20247
Q gi|254780256|r 11 RMGDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFS--------------------------------RKRIA 58 (131)
Q Consensus 11 ~~~~~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~--------------------------------~kk~A 58 (131)
..+++.++|.++++++||+|+++||++||||++++|+.+|+|+ |+++|
T Consensus 9 ~~~~k~akA~~~~~riS~Kk~r~va~~IrG~~v~~A~~~L~~v~~kk~~vp~kr~~~~v~~~~~~~~~~~~~gr~P~kaa 88 (184)
T 2zkr_r 9 ENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSA 88 (184)
T ss_dssp SCTTTEEEEEECSCCSCHHHHHHHHHHHTTSBHHHHHHHHHHHHHTSSCEECSSSCTTCCBCCSTTSCSCSBEECCHHHH
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 89984268966877476799999999987990999999999888567431056652001136563024766454758999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf 999999999999998405998233699999988981142010256666372017850089999851723
Q gi|254780256|r 59 GEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDE 127 (131)
Q Consensus 59 ~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~ 127 (131)
..|.++|+||.+||+++ |+|+|+|||+++|||+||++||++|||+||++++++++|||+|||+|.++.
T Consensus 89 ~~i~klL~sa~aNA~~~-~ld~~~L~I~~i~v~~G~~~kR~~pRArGRa~~i~k~~shI~vvl~E~~~~ 156 (184)
T 2zkr_r 89 EFLLHMLKNAESNAELK-GLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQI 156 (184)
T ss_dssp HHHHHHHHHHHHHHHHH-TSCTTTCEEEEEEEC-CCCEEEEEEETTTEEEEEEEC-CCEEEEEECC---
T ss_pred HHHHHHHHHHHHHHHHC-CCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 99999999999878734-998033499999979886046776166888787317984589999507745