PSIBLAST alignment of GI: 254780256 and protein with PDB id: 1pnu
>gi|34811570|pdb|1PNU|Q Chain Q, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 130
>gi|34811623|pdb|1PNY|Q Chain Q, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 130
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 4 KRSVSKRRMGDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRK 63
K+ ++ A+A +R+SP+K+ LV +IRGK V DA L F + + V K
Sbjct: 7 KKQRKQQVKLRKPGFAVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAK 66
Query: 64 TLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKRFHCRGRQRIGRIVRPFSRLTVIVRE 123
L SA ANA +N ++ DRL V EAYV +KR R R I + S +T+IV E
Sbjct: 67 VLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAE 126
Query: 124 VSDE 127
++
Sbjct: 127 KGNK 130