HHsearch alignment for GI: 254780257 and conserved domain: COG0185
>COG0185 RpsS Ribosomal protein S19 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=1.3e-42 Score=264.98 Aligned_cols=91 Identities=56% Similarity=0.992 Sum_probs=86.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 97787767562589999999862168983598750374781022264899970862689998525110101253364363
Q gi|254780257|r 1 MARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC 80 (92)
Q Consensus 1 MsRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~ 80 (92)
T Consensus 1 ~~RSlkkGp~~~~~Ll~Kv~~~~~~~~k~~IkT~sR~s~IlPemVG~ti~VhNGk~~vpV~I~~eMVGHkLGEFapTR~~ 80 (93)
T COG0185 1 MRRSLKKGPFVDKHLLKKVRKAKESGKKKPIKTWSRRSTILPEMVGLTIAVHNGKKFVPVEITEEMVGHKLGEFAPTRTF 80 (93)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEECHHHCCCEEEEECCCEEEEEEECHHHCCEECCCCCCEECC
T ss_conf 97432237661289999999987506787606530454855546373899976963777882642336140331553021
Q ss_pred CCCCCCC-CCCC
Q ss_conf 5766665-3125
Q gi|254780257|r 81 PGHGSDK-KAKR 91 (92)
Q Consensus 81 ~~H~~~k-k~k~ 91 (92)
T Consensus 81 ~~H~~~~~~atr 92 (93)
T COG0185 81 VGHGADGIKATR 92 (93)
T ss_pred CCCCCCCCCCCC
T ss_conf 446888757555