HHsearch alignment for GI: 254780257 and conserved domain: COG0185

>COG0185 RpsS Ribosomal protein S19 [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=1.3e-42  Score=264.98  Aligned_cols=91  Identities=56%  Similarity=0.992  Sum_probs=86.9

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             97787767562589999999862168983598750374781022264899970862689998525110101253364363
Q gi|254780257|r    1 MARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC   80 (92)
Q Consensus         1 MsRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~   80 (92)
T Consensus         1 ~~RSlkkGp~~~~~Ll~Kv~~~~~~~~k~~IkT~sR~s~IlPemVG~ti~VhNGk~~vpV~I~~eMVGHkLGEFapTR~~   80 (93)
T COG0185           1 MRRSLKKGPFVDKHLLKKVRKAKESGKKKPIKTWSRRSTILPEMVGLTIAVHNGKKFVPVEITEEMVGHKLGEFAPTRTF   80 (93)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEECHHHCCCEEEEECCCEEEEEEECHHHCCEECCCCCCEECC
T ss_conf             97432237661289999999987506787606530454855546373899976963777882642336140331553021


Q ss_pred             CCCCCCC-CCCC
Q ss_conf             5766665-3125
Q gi|254780257|r   81 PGHGSDK-KAKR   91 (92)
Q Consensus        81 ~~H~~~k-k~k~   91 (92)
T Consensus        81 ~~H~~~~~~atr   92 (93)
T COG0185          81 VGHGADGIKATR   92 (93)
T ss_pred             CCCCCCCCCCCC
T ss_conf             446888757555