HHsearch alignment for GI: 254780257 and conserved domain: KOG0899

Probab=100.00  E-value=2.4e-35  Score=223.36  Aligned_cols=84  Identities=49%  Similarity=0.925  Sum_probs=78.4

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             97787767562589999999862168983598750374781022264899970862689998525110101253364363
Q gi|254780257|r    1 MARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC   80 (92)
Q Consensus         1 MsRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~   80 (92)
T Consensus        10 m~RSvwK~P~V~~~~~rk~~~~~~~---~pikt~sRasTIlP~~Vg~~~~IhNGk~~v~vkIte~mVGHKlGEFapTrk~   86 (93)
T KOG0899          10 MTRSVWKGPFVVKFLLRKIEKLKGK---APIKTWSRASTILPTMVGHTFAIHNGKEHVPVKITEDMVGHKLGEFAPTRKF   86 (93)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHCCC---CCEEEHHHHCCHHHHHHCCEEEEECCCCEEEEEEECCHHCCCCCCCCCHHHH
T ss_conf             7777621963568887899986588---7546402331011465071689856961233786401012221233414555


Q ss_pred             CCCCCCC
Q ss_conf             5766665
Q gi|254780257|r   81 PGHGSDK   87 (92)
Q Consensus        81 ~~H~~~k   87 (92)
T Consensus        87 ~~~aktk   93 (93)
T KOG0899          87 FGHAKTK   93 (93)
T ss_pred             HCCCCCC
T ss_conf             2212479