HHsearch alignment for GI: 254780257 and conserved domain: PRK04038

>PRK04038 rps19p 30S ribosomal protein S19P; Provisional.
Probab=99.97  E-value=1.5e-31  Score=201.65  Aligned_cols=86  Identities=41%  Similarity=0.716  Sum_probs=76.2

Q ss_pred             CCCCCCCCC-CHHHHHHHHHHHCC-CCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             787767562-58999999986216-8983598750374781022264899970862689998525110101253364363
Q gi|254780257|r    3 RSVRKGPFV-TKSLLKKVSQARDS-GGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC   80 (92)
Q Consensus         3 RS~~Kgpfv-~~~L~~ki~~~~~~-~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~   80 (92)
T Consensus        35 R~l~RGl~~~~~~Ll~klrkak~~~~kp~~ikTh~R~~iIlPemvG~~i~VynGk~f~~veI~~eMiGh~lGEFa~Trk~  114 (134)
T PRK04038         35 RSLKRGLTPEQRKLLEKIRKAKRLKNKGRVIRTHCRDMIILPEMVGLTIAVYNGKEFVPVEIVPEMIGHYLGEFALTRKR  114 (134)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEECHHHCCCEEEEECCCEEEEEEECCCCCCEEECCCCCCCCC
T ss_conf             45403778789999999998664357998626733676868646471898963864788871625036030024564377


Q ss_pred             CCCCCCCC
Q ss_conf             57666653
Q gi|254780257|r   81 PGHGSDKK   88 (92)
Q Consensus        81 ~~H~~~kk   88 (92)
T Consensus       115 v~Hg~pGi  122 (134)
T PRK04038        115 VQHGSPGI  122 (134)
T ss_pred             CCCCCCCC
T ss_conf             66799965