HHSEARCH alignment of GI: 254780257 and SCOP domain: d2uubs1

Alignment
>d2uubs1 d.28.1.1 (S:2-81) Ribosomal protein S19 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=4.7e-38  Score=236.28  Aligned_cols=80  Identities=46%  Similarity=0.892  Sum_probs=77.7

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             77877675625899999998621689835987503747810222648999708626899985251101012533643635
Q gi|254780257|r    2 ARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHCP   81 (92)
Q Consensus         2 sRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~~   81 (92)
                      .||+|||||++++|++++.+++..+.+++|+||||+|+|+|+|||++|+|||||+|++|+|+||||||||||||+||+|.
T Consensus         1 ~RS~~Kgpfv~~~Llkki~~~~~~~~k~~IkT~sR~s~IlP~~VG~~~~VyNGk~fv~v~It~eMVGhklGEFa~TR~fr   80 (80)
T d2uubs1           1 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYR   80 (80)
T ss_dssp             CCCCCSSCCCCHHHHHHHHTTTSSCCCSEEEECCSSSBCCGGGTTCEEEEECSSCEEEEECCGGGTTSBSGGGSCCCCCC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEECHHHCCEEEEEEECCEEEEEEECCCCCCCEEECCCCCCCCC
T ss_conf             98765584703899999999770388875768516668066781649999738736768844471350000455513279


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S19
superfamily: Ribosomal protein S19
family: Ribosomal protein S19
domain: Ribosomal protein S19
species: Thermus thermophilus [TaxId: 274]