>3ofq_C 50S ribosomal protein L2; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_C 2wwq_C 3ofr_C* 3i1n_C 1vs8_C 1vs6_C 2aw4_C 2awb_C 2vhm_C 2vhn_C 3bbx_C 3df2_C 3df4_C 1vt2_C 3i1p_C 3i1r_C 3i1t_C 3i20_C 3i22_C 3kcr_6 ...

Probab=100.00 E-value=0 Score=798.10 Aligned_cols=271 Identities=56% Similarity=0.950 Sum_probs=264.8 Q ss_pred CCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEE Q ss_conf 75011588841051087045764168872221115543677588984878864787510268798863377760478876 Q gi|254780258|r 2 ALKNFNPDTSGRRQLVMVDRNSLHSGKPIKSLTRGLCSKGGRNNTGRVTMRFRGGGHKNRYRLVDFKRGEYGLEGVVKRL 81 (278) Q Consensus 2 ~~k~~kP~Tp~~R~~~~~~~~~l~k~~p~K~L~~~~~~~~GRNn~GrITvrhRGGGhKr~yR~IDf~r~~~~~~~~V~~I 81 (278) ||++|||+|||+||++++++++||+++|+|+|+.++++++||||+|+||+|||||||||+||+|||+|++.+++++|++| T Consensus 1 a~~~~kP~tpg~R~~~~~~~~~l~k~~p~k~L~~~~~k~~GRNn~GrIT~rhrGGGhKr~yr~Idf~r~k~~i~~~V~~I 80 (271) T 3ofq_C 1 AVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERL 80 (271) T ss_dssp CCCCCCSSSTTTSSCCCCCCTTSCCSCCCGGGCCCCCCCTTBCSSCSBSSSSBCCSCCCCCCCCCSSCCCTTCCEECCCE T ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEE T ss_conf 97432795986786683468865979835665165767788699967878701786650157874215168977899999 Q ss_pred EECCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCEEEEEECCC Q ss_conf 41588525889841477634675164566104578836667675757411044357463776233303688258863465 Q gi|254780258|r 82 EYDPNRTAFIALISYSNGSLAYILAPQRLSVGDKVISSDSAVDVKPGNAMPLRFIPVGSIVHNVEMKPGKGGQISRSAGS 161 (278) Q Consensus 82 eYDPnRsa~IALv~~~~g~~~YIlAp~gl~vGd~I~s~~~~~~i~~Gn~lpL~~IP~Gt~I~NIE~~pG~Ggkl~RsAGt 161 (278) ||||||||+||||.|.||+++|||||+||++||.|.++.++ ++++||++||.+||+||+|||||+.||+|||||||||| T Consensus 81 eyDPnRsa~IAlv~~~dg~~~YIlap~gl~vGd~I~sg~~~-~~~~Gn~lpL~~IP~Gt~I~NIE~~pg~Ggk~aRSAGt 159 (271) T 3ofq_C 81 EYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDA-AIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT 159 (271) T ss_dssp ECCTTSSSCEEECCBSSSCCCEEECBSCCCTTCEECBSSSC-CCSTTCBCCGGGSCTTCBCCSCCSSTTTCCCSSCSTTC T ss_pred EECCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEECCCC-CCCCCCCCCHHHCCCCCEEEEEEECCCCCCEEEEECCC T ss_conf 97899873179998169958988886878689889858888-76666637175388987788766328997559840785 Q ss_pred EEEEEEECCCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC Q ss_conf 18996750888999948975899856780999851255332300131344100577997012332687478888888888 Q gi|254780258|r 162 YARLVERDRSRALLRLSSGEMRFVHSSCMASIGAVSNQDHSNVNHAKAGRARWLGMRSHVRGVAMNPVDHPHGGGEGKTS 241 (278) Q Consensus 162 ~a~Ii~k~~~~~~ikLPSGe~r~i~~~c~AtIG~vsN~~~~~~~~gKAG~~Rwlg~RP~VRGvAMNpvDHPhGGGeGkt~ 241 (278) ||||+++|+++++|||||||+++|+++|+||||+|||.+|.+++++|||++||||+||+|||||||||||||||||+++ T Consensus 160 ~A~ii~k~~~~~~vkLPSGe~r~i~~~c~AtiG~vsn~~~~~~~~gKAG~~r~~g~rP~VRGvAMNpvdHPhGGg~~~~- 238 (271) T 3ofq_C 160 YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRN- 238 (271) T ss_dssp CCEEEECCSSCEEEECTTCCEEEECSCSCCCSSCBSCCTTTTCCCCSHHHHHTTTBCCCCCGGGSCTTTSTTCCCSSSC- T ss_pred EEEEEEECCCEEEEEECCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCC- T ss_conf 7999996098899981577869988878799977128135545667588874079998434104487768989988888- Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCEEEEEECC Q ss_conf 888788788734377254888888614996234 Q gi|254780258|r 242 GGRNPCSPWGKLTKGKRTRSNKSTDVFIARSRH 274 (278) Q Consensus 242 ~gr~~~spwG~~~kg~kTr~~k~~~~~i~~~r~ 274 (278) +|++|+||||++|||+|||++|+||+||+++|. T Consensus 239 ~g~~p~spwG~~~kg~ktr~~k~~~~~i~~rr~ 271 (271) T 3ofq_C 239 FGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRS 271 (271) T ss_dssp CCSCCBCTTSCBCSSCCCCCCSSGGGGEEECCC T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC T ss_conf 996988988615898758998887886986379

HHsearch results for GI: 254780258 and protein with PDBid: 3ofq_C